Homology
BLAST of Sed0025451 vs. NCBI nr
Match:
XP_038892927.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida] >XP_038892928.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida])
HSP 1 Score: 498.0 bits (1281), Expect = 5.9e-137
Identity = 279/327 (85.32%), Postives = 288/327 (88.07%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGP GGSRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGP------------GGSREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG----RSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPSPDE 240
SYSRGRS SR RSPVKRERS+ERS+KRSRSPRGRSSP+RHSLSPPP K MKR SP+PDE
Sbjct: 181 SYSRGRSYSRSRSPVKRERSLERSDKRSRSPRGRSSPKRHSLSPPP-KTMKR--SPTPDE 240
Query: 241 RSPEEARRSPSSGNRDSPRGRSRSPRGRSRSPMDEAEDFNG----SEKREENGYSRSPSP 300
RSPEEARRS S GNRDSPRGRSRSPRGRSRSPMDE EDF+G + +REENGYSRSPSP
Sbjct: 241 RSPEEARRSLSPGNRDSPRGRSRSPRGRSRSPMDEGEDFSGGGSRNYRREENGYSRSPSP 300
Query: 301 LPREERSRSPVNDEDNDGSPRGGSESA 324
LPREE RSPVNDED +GSPRGGSESA
Sbjct: 301 LPREE--RSPVNDEDQNGSPRGGSESA 306
BLAST of Sed0025451 vs. NCBI nr
Match:
XP_022942535.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata] >XP_022942536.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 496.1 bits (1276), Expect = 2.3e-136
Identity = 283/343 (82.51%), Postives = 292/343 (85.13%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGPGG RE SRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE---------SREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG----RSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPR-GRSSPRRHSLSPPPSKAMKRSPSPSPD 240
SYSRGRS SR RSPVKR+RS+ERSEKRSRSPR GR SP+RHSLSPPPSKAMKR SP+PD
Sbjct: 181 SYSRGRSYSRSRSPVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKR--SPTPD 240
Query: 241 ERSPEEARRSPSSGNRDSPRG---------------RSRSPRGRSRSPMDEAEDFNG--- 300
RSPEEARRSPS GNRDSPRG RSRSPRGRSRSPMDEAEDFNG
Sbjct: 241 VRSPEEARRSPSPGNRDSPRGRSRSRSRSPRGRSRSRSRSPRGRSRSPMDEAEDFNGGGS 300
Query: 301 -SEKREENGYSRSPSPLPREERSRSPVNDEDNDGSPRGGSESA 324
+ ++EENGYSRSPSPLPREE RSPVNDED +GSPRGGSESA
Sbjct: 301 RNYRKEENGYSRSPSPLPREE--RSPVNDEDANGSPRGGSESA 326
BLAST of Sed0025451 vs. NCBI nr
Match:
XP_008445806.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo] >XP_008445807.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo])
HSP 1 Score: 493.0 bits (1268), Expect = 1.9e-135
Identity = 281/330 (85.15%), Postives = 290/330 (87.88%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGP GGSRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGP------------GGSREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG----RSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPSPDE 240
SYSRGRS SR RSPVKR+RS+ERS+KRSRSPRGRSSP+RHSLSPPP KAMKR SP+PDE
Sbjct: 181 SYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKR--SPTPDE 240
Query: 241 RSPEE-ARRSPSSGNRD--SPRGRSRSPRGRSRSPMDEAEDFNG----SEKREENGYSRS 300
RSPEE ARRS S GNRD SPRGRSRSPRGRSRSPMDE EDFNG + +REENGYSRS
Sbjct: 241 RSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRS 300
Query: 301 PSPLPREERSRSPVNDEDNDGSPRGGSESA 324
PSPLPREE RSPVNDEDN+GSPRGGSESA
Sbjct: 301 PSPLPREE--RSPVNDEDNNGSPRGGSESA 309
BLAST of Sed0025451 vs. NCBI nr
Match:
XP_022139066.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia] >XP_022139067.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia] >XP_022139068.1 serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia])
HSP 1 Score: 492.3 bits (1266), Expect = 3.3e-135
Identity = 280/347 (80.69%), Postives = 290/347 (83.57%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGP GGSRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGP------------GGSREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG--GGRSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPSPDE 240
SYSRGRS SR RSP+KRERS+ERSEKRSRSPRGR SP+RHSLSPPP KAMKR SP+PDE
Sbjct: 181 SYSRGRSYSRSRSPIKRERSLERSEKRSRSPRGRPSPKRHSLSPPP-KAMKR--SPTPDE 240
Query: 241 RSPEEARRSPSSGNRD---------------------SPRGRSRSPRGRSRSPMDEAEDF 300
RSPEEARRSPS GNRD SPRGRSRSPRGRSRSPMDEAEDF
Sbjct: 241 RSPEEARRSPSPGNRDSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDF 300
Query: 301 NGSE---KREENGYSRSPSPLPREERSRSPVNDEDNDGSPRGGSESA 324
+G +REENGYSRSPSPLPREE RSP+NDEDN+G+PRGGSESA
Sbjct: 301 DGGSRNYRREENGYSRSPSPLPREE--RSPINDEDNNGTPRGGSESA 328
BLAST of Sed0025451 vs. NCBI nr
Match:
XP_004143594.1 (serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004143595.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_031741874.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >KAE8647969.1 hypothetical protein Csa_000224 [Cucumis sativus])
HSP 1 Score: 491.5 bits (1264), Expect = 5.6e-135
Identity = 280/329 (85.11%), Postives = 289/329 (87.84%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGP GGSRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGP------------GGSREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG----RSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPSPDE 240
SYSRGRS SR RSPVKR+RS+ERS+KRSRSPRGRSSP+RHSLSPPP KAMKR SP+PDE
Sbjct: 181 SYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKR--SPTPDE 240
Query: 241 RSPEE-ARRSPSSGNRD--SPRGRSRSPRGRSRSPMDEAEDFNG----SEKREENGYSRS 300
RSPEE ARRS S GNRD SPRGRSRSPRGRSRSPMDE EDFNG + +REENGYSRS
Sbjct: 241 RSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRS 300
Query: 301 PSPLPREERSRSPVNDEDNDGSPRGGSES 323
PSPLPREE RSPVNDEDN+GSPRGGSES
Sbjct: 301 PSPLPREE--RSPVNDEDNNGSPRGGSES 308
BLAST of Sed0025451 vs. ExPASy Swiss-Prot
Match:
Q9FYB7 (Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=RS2Z32 PE=1 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 5.3e-72
Identity = 180/306 (58.82%), Postives = 206/306 (67.32%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVG LSSRTR+RDL+ +FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRG-PPGAGRCFNCG 120
RY L+GRD GSRI VE ++G PR GSR+ G RG PPG+GRCFNCG
Sbjct: 61 RYYLDGRDFDGSRITVEASRGAPR---------------GSRDNGSRGPPPGSGRCFNCG 120
Query: 121 IDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDE---YSRSP----SPRRGR 180
+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP K + YSRSP SPR R
Sbjct: 121 VDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPR--R 180
Query: 181 SRSRSRSRSYSRGRSDSRHRSPVKRERSVE------RSEKRSRSPRGRS---SPRRHSLS 240
RS SRSRSYSRGRS SR RSPV+RE+SVE ++ +RS SP+GR SP R +
Sbjct: 181 RRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVID 240
Query: 241 PPPSKAMKRSPSPSPDERSPEEARRSPSSGNRDSPRGRSRSPRGRSRSPM-DEAEDFNGS 289
P + SP + A SP G +SP G + G+ RSP+ DEAE S
Sbjct: 241 ASPKRGSDYDGSPKENGNGRNSA--SPIVGGGESPVGLN----GQDRSPIDDEAELSRPS 283
BLAST of Sed0025451 vs. ExPASy Swiss-Prot
Match:
Q8VYA5 (Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=RS2Z33 PE=1 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 1.1e-69
Identity = 181/332 (54.52%), Postives = 207/332 (62.35%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVG LSSRTR+RDL+ +FSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRG-PPGAGRCFNCG 120
R+ L+GRD GSRI VE ++G PR GSR+ RG PPGAGRCFNCG
Sbjct: 61 RHYLDGRDFDGSRITVEFSRGAPR---------------GSRDFDSRGPPPGAGRCFNCG 120
Query: 121 IDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRD-EYSRSPSPRRGRSRSRSR 180
+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R YSRSP R R RS
Sbjct: 121 VDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSP 180
Query: 181 SRSYSRGRSDSRHRSPV-KRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPS 240
SRS SR RS SR RSPV +RERSV E+RSRSP+
Sbjct: 181 SRSLSRSRSYSRSRSPVRRRERSV---EERSRSPKRMD---------------------- 240
Query: 241 PDERSPEEARRSPSSGNRDSPRGRSRSPRGRSRSPMDEAEDFNGSEKREENGYSRSPSPL 300
D SP RSP + SP+ SP + + D +G ++NG + SP+
Sbjct: 241 -DSLSPRARDRSPVLDDEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-QDNGRNSVVSPV 289
Query: 301 -----PREERSRSPVND--EDNDGSPRGGSES 323
+ RSPV+D E N SPR GSES
Sbjct: 301 VGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 289
BLAST of Sed0025451 vs. ExPASy Swiss-Prot
Match:
Q23121 (Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=6239 GN=rsp-1 PE=3 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 1.4e-19
Identity = 121/327 (37.00%), Postives = 154/327 (47.09%), Query Frame = 0
Query: 12 RLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHG 71
R+Y+G L+SR +D++ F YG++RDV +K + FVEF D RDA+DA + LNG+++ G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 72 SRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGR-CFNCGIDGHWARDCKA 131
R+I++ +K PRG GG R G GG+R G G GR F+ G R+ +
Sbjct: 64 ERVILDYSK--PRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESRY 123
Query: 132 G---------------------DWKNKCYRCG-----ERGHIEKN----CQNSPKKLKR- 191
G D K++ R G H N C +P LKR
Sbjct: 124 GRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRC 183
Query: 192 -----------------DE----YSRSPSPRRGRSRSRS----RSRSYSRGRSDSRHRSP 251
D+ SRS S R RSRSRS RSRS S RS SR RSP
Sbjct: 184 IEKCDGMDLNGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSP 243
Query: 252 VKRERSVERSEKRSRSPRGRSSPRRHSLSPPPS-KAMKRSPSPSPDERSPEEARRSPSSG 281
KR R +S+ RSRS R RS+ R S SP S K + RSPSP RSP E
Sbjct: 244 PKRSRRESKSKSRSRS-RSRSADNRKSRSPSRSPKKVDRSPSPPRGSRSPSE-------- 303
BLAST of Sed0025451 vs. ExPASy Swiss-Prot
Match:
Q8VE97 (Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 2.9e-17
Identity = 120/320 (37.50%), Postives = 160/320 (50.00%), Query Frame = 0
Query: 12 RLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHG 71
R+Y+G LS + R RD++ F YG++ +VD+K Y FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEIAKGVPRGPGGFREFGGSREFGGSRELG--GRGPPGAGRCFNCGIDGHWARDCK 131
R+IVE A+G PR G +G R G R G GPP + ++ +R C
Sbjct: 63 ERVIVEHARG-PRRDG---SYGSGRSGYGYRRSGRDKYGPPTRTE-YRLIVENLSSR-CS 122
Query: 132 AGDWKNKCYRCGE------------RGHIE----KNCQNSPKKLKRDEYSR------SPS 191
D K+ + GE G IE + + + +KL E +
Sbjct: 123 WQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDK 182
Query: 192 PRRGRSRSRSRSRSYSRGRSDSRHRSPVKRERSVERSEKRSRS-PRGRSSPRRHSLSPPP 251
P R RS SRSRS+SR RS SRH ++ RS S K S S R RS HS S
Sbjct: 183 PGSRRRRSYSRSRSHSRSRSRSRHS---RKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSR 242
Query: 252 SKAMKRSPSPSPDERSPEEARRSPSSGNRDSPRGRSRSP-RGRSRSPMDEAEDFNGSEKR 306
S++ RS RS +E RSPS N+ R RSRSP + RS+S D AED +
Sbjct: 243 SRSQSRS-------RSKKEKSRSPSKDNKS--RSRSRSPDKSRSKS-KDHAED--KLQNN 301
BLAST of Sed0025451 vs. ExPASy Swiss-Prot
Match:
Q3B7L6 (Serine/arginine-rich splicing factor 6 OS=Bos taurus OX=9913 GN=SRSF6 PE=2 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 1.9e-16
Identity = 126/347 (36.31%), Postives = 162/347 (46.69%), Query Frame = 0
Query: 12 RLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHG 71
R+Y+G LS R +D+ FS YGR+ +D+K Y FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLGIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEIAKGVPRGPGGFREFGGSREFGG---SRELGGR---GPPGAGRCFNCGIDGHWA 131
R+IVE A+G R G+ GSR GG SR GR GPP F ++ +
Sbjct: 63 ERVIVEHARGPRRDRDGYSY--GSRSGGGGYSSRRTSGRDKYGPPVRTE-FRLIVENLSS 122
Query: 132 RDCKAGDWKNKCYRCGE------------RGHIEKNCQNSPKK--------------LKR 191
R C D K+ + GE G IE + K+ ++
Sbjct: 123 R-CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL 182
Query: 192 DEYSRSPSPRRGRSRSRSRSRSYSRGRSDSRHRSPVKRERSVERSEKRSRS-PRGRSSPR 251
E S RR S SRSRSRS R RS SR RS R RS+ +S RSRS +GRS R
Sbjct: 183 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSR-RSSRSRSRSISKSRSRSRSRSKGRSRSR 242
Query: 252 RHSLSPPPSKAMKRSPSPSPDERSPEEARRSPSSGNRDSPRGRSRSPRGRSRSPMDEAED 311
K+ +S S +R RS S + R RSRS RSRSP + +
Sbjct: 243 SKG-----RKSRSKSKSKPKSDRGSRSRSRSRSKDEYEKSRSRSRS---RSRSPKENGKG 302
Query: 312 FNGSEKREENGYSRSPSPL---PREERSRSPVNDEDNDGSPRGGSES 323
S+ R + SRS SPL P + RS SP + R S+S
Sbjct: 303 DIKSKSRSRS-QSRSDSPLPAPPSKARSVSPPPKRASRSHSRSRSKS 335
BLAST of Sed0025451 vs. ExPASy TrEMBL
Match:
A0A6J1FWH1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447542 PE=4 SV=1)
HSP 1 Score: 496.1 bits (1276), Expect = 1.1e-136
Identity = 283/343 (82.51%), Postives = 292/343 (85.13%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGPGG RE SRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE---------SREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG----RSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPR-GRSSPRRHSLSPPPSKAMKRSPSPSPD 240
SYSRGRS SR RSPVKR+RS+ERSEKRSRSPR GR SP+RHSLSPPPSKAMKR SP+PD
Sbjct: 181 SYSRGRSYSRSRSPVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKR--SPTPD 240
Query: 241 ERSPEEARRSPSSGNRDSPRG---------------RSRSPRGRSRSPMDEAEDFNG--- 300
RSPEEARRSPS GNRDSPRG RSRSPRGRSRSPMDEAEDFNG
Sbjct: 241 VRSPEEARRSPSPGNRDSPRGRSRSRSRSPRGRSRSRSRSPRGRSRSPMDEAEDFNGGGS 300
Query: 301 -SEKREENGYSRSPSPLPREERSRSPVNDEDNDGSPRGGSESA 324
+ ++EENGYSRSPSPLPREE RSPVNDED +GSPRGGSESA
Sbjct: 301 RNYRKEENGYSRSPSPLPREE--RSPVNDEDANGSPRGGSESA 326
BLAST of Sed0025451 vs. ExPASy TrEMBL
Match:
A0A1S3BDJ7 (serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)
HSP 1 Score: 493.0 bits (1268), Expect = 9.2e-136
Identity = 281/330 (85.15%), Postives = 290/330 (87.88%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGP GGSRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGP------------GGSREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG----RSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPSPDE 240
SYSRGRS SR RSPVKR+RS+ERS+KRSRSPRGRSSP+RHSLSPPP KAMKR SP+PDE
Sbjct: 181 SYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKR--SPTPDE 240
Query: 241 RSPEE-ARRSPSSGNRD--SPRGRSRSPRGRSRSPMDEAEDFNG----SEKREENGYSRS 300
RSPEE ARRS S GNRD SPRGRSRSPRGRSRSPMDE EDFNG + +REENGYSRS
Sbjct: 241 RSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRS 300
Query: 301 PSPLPREERSRSPVNDEDNDGSPRGGSESA 324
PSPLPREE RSPVNDEDN+GSPRGGSESA
Sbjct: 301 PSPLPREE--RSPVNDEDNNGSPRGGSESA 309
BLAST of Sed0025451 vs. ExPASy TrEMBL
Match:
A0A6J1CET7 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010076 PE=4 SV=1)
HSP 1 Score: 492.3 bits (1266), Expect = 1.6e-135
Identity = 280/347 (80.69%), Postives = 290/347 (83.57%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGP GGSRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGP------------GGSREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG--GGRSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPSPDE 240
SYSRGRS SR RSP+KRERS+ERSEKRSRSPRGR SP+RHSLSPPP KAMKR SP+PDE
Sbjct: 181 SYSRGRSYSRSRSPIKRERSLERSEKRSRSPRGRPSPKRHSLSPPP-KAMKR--SPTPDE 240
Query: 241 RSPEEARRSPSSGNRD---------------------SPRGRSRSPRGRSRSPMDEAEDF 300
RSPEEARRSPS GNRD SPRGRSRSPRGRSRSPMDEAEDF
Sbjct: 241 RSPEEARRSPSPGNRDSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDF 300
Query: 301 NGSE---KREENGYSRSPSPLPREERSRSPVNDEDNDGSPRGGSESA 324
+G +REENGYSRSPSPLPREE RSP+NDEDN+G+PRGGSESA
Sbjct: 301 DGGSRNYRREENGYSRSPSPLPREE--RSPINDEDNNGTPRGGSESA 328
BLAST of Sed0025451 vs. ExPASy TrEMBL
Match:
A0A0A0KS31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 2.7e-135
Identity = 280/329 (85.11%), Postives = 289/329 (87.84%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 63 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGP GGSRE GRGPPG GRCFNCGI
Sbjct: 123 RYSLNGRDVHGSRIIVEIAKGVPRGP------------GGSREYLGRGPPGTGRCFNCGI 182
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 183 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG----RSRSR 242
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPSPDE 240
SYSRGRS SR RSPVKR+RS+ERS+KRSRSPRGRSSP+RHSLSPPP KAMKR SP+PDE
Sbjct: 243 SYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPP-KAMKR--SPTPDE 302
Query: 241 RSPEE-ARRSPSSGNRD--SPRGRSRSPRGRSRSPMDEAEDFNG----SEKREENGYSRS 300
RSPEE ARRS S GNRD SPRGRSRSPRGRSRSPMDE EDFNG + +REENGYSRS
Sbjct: 303 RSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRS 362
Query: 301 PSPLPREERSRSPVNDEDNDGSPRGGSES 323
PSPLPREE RSPVNDEDN+GSPRGGSES
Sbjct: 363 PSPLPREE--RSPVNDEDNNGSPRGGSES 370
BLAST of Sed0025451 vs. ExPASy TrEMBL
Match:
A0A6J1JVG4 (serine/arginine-rich splicing factor RS2Z32-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489058 PE=4 SV=1)
HSP 1 Score: 487.3 bits (1253), Expect = 5.1e-134
Identity = 278/334 (83.23%), Postives = 289/334 (86.53%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVG LSSRTRSRDLDD+FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRGPPGAGRCFNCGI 120
RYSLNGRDVHGSRIIVEIAKGVPRGPGG RE SRE GRGPPG GRCFNCGI
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE---------SREYLGRGPPGTGRCFNCGI 120
Query: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDEYSRSPSPRRGRSRSRSRSR 180
DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR YSRSPSPRRG RSRSR
Sbjct: 121 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRG----RSRSR 180
Query: 181 SYSRGRSDSRHRSPVKRERSVERSEKRSRSPR-GRSSPRRHSLSPPPSKAMKRSPSPSPD 240
SYSRGRS SR RSPVKR+RS+ERSEKRSRSPR GR SP+RHSLSPPPSKAMKR SP+PD
Sbjct: 181 SYSRGRSYSRSRSPVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKAMKR--SPTPD 240
Query: 241 ERSPEEARRSPSSGNRDSPRG------RSRSPRGRSRSPMDEAEDFNG----SEKREENG 300
RSPEEARRS S NRDSPRG RSRSPRGRSRSPMDEAEDFNG + ++EENG
Sbjct: 241 VRSPEEARRSLSPENRDSPRGRSRRRSRSRSPRGRSRSPMDEAEDFNGGGSRNYRKEENG 300
Query: 301 YSRSPSPLPREERSRSPVNDEDNDGSPRGGSESA 324
YSRSPSPLPREE RSPVND++ +GSPRGGS SA
Sbjct: 301 YSRSPSPLPREE--RSPVNDDEANGSPRGGSGSA 317
BLAST of Sed0025451 vs. TAIR 10
Match:
AT3G53500.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )
HSP 1 Score: 272.7 bits (696), Expect = 3.8e-73
Identity = 180/306 (58.82%), Postives = 206/306 (67.32%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVG LSSRTR+RDL+ +FSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRG-PPGAGRCFNCG 120
RY L+GRD GSRI VE ++G PR GSR+ G RG PPG+GRCFNCG
Sbjct: 61 RYYLDGRDFDGSRITVEASRGAPR---------------GSRDNGSRGPPPGSGRCFNCG 120
Query: 121 IDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRDE---YSRSP----SPRRGR 180
+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP K + YSRSP SPR R
Sbjct: 121 VDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPR--R 180
Query: 181 SRSRSRSRSYSRGRSDSRHRSPVKRERSVE------RSEKRSRSPRGRS---SPRRHSLS 240
RS SRSRSYSRGRS SR RSPV+RE+SVE ++ +RS SP+GR SP R +
Sbjct: 181 RRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVID 240
Query: 241 PPPSKAMKRSPSPSPDERSPEEARRSPSSGNRDSPRGRSRSPRGRSRSPM-DEAEDFNGS 289
P + SP + A SP G +SP G + G+ RSP+ DEAE S
Sbjct: 241 ASPKRGSDYDGSPKENGNGRNSA--SPIVGGGESPVGLN----GQDRSPIDDEAELSRPS 283
BLAST of Sed0025451 vs. TAIR 10
Match:
AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33 )
HSP 1 Score: 265.0 bits (676), Expect = 7.9e-71
Identity = 181/332 (54.52%), Postives = 207/332 (62.35%), Query Frame = 0
Query: 1 MPRYDDRYGGTRLYVGHLSSRTRSRDLDDMFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVG LSSRTR+RDL+ +FSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60
Query: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRG-PPGAGRCFNCG 120
R+ L+GRD GSRI VE ++G PR GSR+ RG PPGAGRCFNCG
Sbjct: 61 RHYLDGRDFDGSRITVEFSRGAPR---------------GSRDFDSRGPPPGAGRCFNCG 120
Query: 121 IDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRD-EYSRSPSPRRGRSRSRSR 180
+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R YSRSP R R RS
Sbjct: 121 VDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSP 180
Query: 181 SRSYSRGRSDSRHRSPV-KRERSVERSEKRSRSPRGRSSPRRHSLSPPPSKAMKRSPSPS 240
SRS SR RS SR RSPV +RERSV E+RSRSP+
Sbjct: 181 SRSLSRSRSYSRSRSPVRRRERSV---EERSRSPKRMD---------------------- 240
Query: 241 PDERSPEEARRSPSSGNRDSPRGRSRSPRGRSRSPMDEAEDFNGSEKREENGYSRSPSPL 300
D SP RSP + SP+ SP + + D +G ++NG + SP+
Sbjct: 241 -DSLSPRARDRSPVLDDEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-QDNGRNSVVSPV 289
Query: 301 -----PREERSRSPVND--EDNDGSPRGGSES 323
+ RSPV+D E N SPR GSES
Sbjct: 301 VGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 289
BLAST of Sed0025451 vs. TAIR 10
Match:
AT3G53500.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )
HSP 1 Score: 200.7 bits (509), Expect = 1.8e-51
Identity = 145/265 (54.72%), Postives = 168/265 (63.40%), Query Frame = 0
Query: 42 MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGS 101
MKRDYAFVEFSDPRDADDARY L+GRD GSRI VE ++G PR GS
Sbjct: 1 MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---------------GS 60
Query: 102 RELGGRG-PPGAGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRD 161
R+ G RG PPG+GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP K
Sbjct: 61 RDNGSRGPPPGSGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKAR 120
Query: 162 E---YSRSP----SPRRGRSRSRSRSRSYSRGRSDSRHRSPVKRERSVE------RSEKR 221
+ YSRSP SPR R RS SRSRSYSRGRS SR RSPV+RE+SVE ++ +R
Sbjct: 121 QGGSYSRSPVKSRSPR--RRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMER 180
Query: 222 SRSPRGRS---SPRRHSLSPPPSKAMKRSPSPSPDERSPEEARRSPSSGNRDSPRGRSRS 281
S SP+GR SP R + P + SP + A SP G +SP G +
Sbjct: 181 SVSPKGRDQSLSPDRKVIDASPKRGSDYDGSPKENGNGRNSA--SPIVGGGESPVGLN-- 240
Query: 282 PRGRSRSPM-DEAEDFNGSEKREEN 289
G+ RSP+ DEAE S K E+
Sbjct: 241 --GQDRSPIDDEAELSRPSPKGSES 242
BLAST of Sed0025451 vs. TAIR 10
Match:
AT2G37340.3 (arginine/serine-rich zinc knuckle-containing protein 33 )
HSP 1 Score: 193.0 bits (489), Expect = 3.8e-49
Identity = 146/291 (50.17%), Postives = 169/291 (58.08%), Query Frame = 0
Query: 42 MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGS 101
MKRDYAFVEF DPRDADDAR+ L+GRD GSRI VE ++G PR GS
Sbjct: 1 MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---------------GS 60
Query: 102 RELGGRG-PPGAGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRD 161
R+ RG PPGAGRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R
Sbjct: 61 RDFDSRGPPPGAGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRS 120
Query: 162 -EYSRSPSPRRGRSRSRSRSRSYSRGRSDSRHRSPV-KRERSVERSEKRSRSPRGRSSPR 221
YSRSP R R RS SRS SR RS SR RSPV +RERSV E+RSRSP+
Sbjct: 121 GSYSRSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSV---EERSRSPKRMD--- 180
Query: 222 RHSLSPPPSKAMKRSPSPSPDERSPEEARRSPSSGNRDSPRGRSRSPRGRSRSPMDEAED 281
D SP RSP + SP+ SP + + D
Sbjct: 181 --------------------DSLSPRARDRSPVLDDEGSPKIIDGSPPPSPKLQKEVGSD 240
Query: 282 FNGSEKREENGYSRSPSPL-----PREERSRSPVND--EDNDGSPRGGSES 323
+G ++NG + SP+ + RSPV+D E N SPR GSES
Sbjct: 241 RDGGSP-QDNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 248
BLAST of Sed0025451 vs. TAIR 10
Match:
AT2G37340.2 (arginine/serine-rich zinc knuckle-containing protein 33 )
HSP 1 Score: 176.4 bits (446), Expect = 3.7e-44
Identity = 138/283 (48.76%), Postives = 161/283 (56.89%), Query Frame = 0
Query: 50 EFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGFREFGGSREFGGSRELGGRG- 109
EF DPRDADDAR+ L+GRD GSRI VE ++G PR GSR+ RG
Sbjct: 20 EFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---------------GSRDFDSRGP 79
Query: 110 PPGAGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRD-EYSRSPS 169
PPGAGRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R YSRSP
Sbjct: 80 PPGAGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPV 139
Query: 170 PRRGRSRSRSRSRSYSRGRSDSRHRSPV-KRERSVERSEKRSRSPRGRSSPRRHSLSPPP 229
R R RS SRS SR RS SR RSPV +RERSV E+RSRSP+
Sbjct: 140 RSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSV---EERSRSPKRMD----------- 199
Query: 230 SKAMKRSPSPSPDERSPEEARRSPSSGNRDSPRGRSRSPRGRSRSPMDEAEDFNGSEKRE 289
D SP RSP + SP+ SP + + D +G +
Sbjct: 200 ------------DSLSPRARDRSPVLDDEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-Q 259
Query: 290 ENGYSRSPSPL-----PREERSRSPVND--EDNDGSPRGGSES 323
+NG + SP+ + RSPV+D E N SPR GSES
Sbjct: 260 DNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 259
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038892927.1 | 5.9e-137 | 85.32 | serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Benincasa hispida] ... | [more] |
XP_022942535.1 | 2.3e-136 | 82.51 | serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucurbita moschata]... | [more] |
XP_008445806.1 | 1.9e-135 | 85.15 | PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis ... | [more] |
XP_022139066.1 | 3.3e-135 | 80.69 | serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Momordica charantia... | [more] |
XP_004143594.1 | 5.6e-135 | 85.11 | serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004... | [more] |
Match Name | E-value | Identity | Description | |
Q9FYB7 | 5.3e-72 | 58.82 | Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=R... | [more] |
Q8VYA5 | 1.1e-69 | 54.52 | Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=R... | [more] |
Q23121 | 1.4e-19 | 37.00 | Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=62... | [more] |
Q8VE97 | 2.9e-17 | 37.50 | Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV... | [more] |
Q3B7L6 | 1.9e-16 | 36.31 | Serine/arginine-rich splicing factor 6 OS=Bos taurus OX=9913 GN=SRSF6 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FWH1 | 1.1e-136 | 82.51 | serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucurbita moschat... | [more] |
A0A1S3BDJ7 | 9.2e-136 | 85.15 | serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3... | [more] |
A0A6J1CET7 | 1.6e-135 | 80.69 | serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charant... | [more] |
A0A0A0KS31 | 2.7e-135 | 85.11 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1 | [more] |
A0A6J1JVG4 | 5.1e-134 | 83.23 | serine/arginine-rich splicing factor RS2Z32-like isoform X3 OS=Cucurbita maxima ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G53500.2 | 3.8e-73 | 58.82 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... | [more] |
AT2G37340.1 | 7.9e-71 | 54.52 | arginine/serine-rich zinc knuckle-containing protein 33 | [more] |
AT3G53500.1 | 1.8e-51 | 54.72 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... | [more] |
AT2G37340.3 | 3.8e-49 | 50.17 | arginine/serine-rich zinc knuckle-containing protein 33 | [more] |
AT2G37340.2 | 3.7e-44 | 48.76 | arginine/serine-rich zinc knuckle-containing protein 33 | [more] |