Sed0025374 (gene) Chayote v1

Overview


Name	Sed0025374
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein CHLOROPLAST IMPORT APPARATUS 2-like
Location	LG03: 44789004 .. 44791744 (+)
RNA-Seq Expression	Sed0025374
Synteny	Sed0025374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCCTTGCATAAGTGGAGGTGGAAGAGGTTACAATTTCAACCTGGAAATTGTGAAATCTCCATCATCTTCATGGACAGGAACTTCTCAAACTTCATCCCCTTCTTCAACTCTCTCTGAATCAAGCAATTCACAGCTAGCAATTTCAACAAGAAAATCCAGAGCTCCTAGAAAACGCCCAAATCAAACCTACAATGAGGCAACAGTTTTGCTATCTACAGCGTATCCAAACGTTTTCTCTACCAAACACCTCACCAATCCACAAAAGTTCACCAAATCTCACGATTCTCTGTTCGGCAAATCGGTCGATTTGTTGATGCCTGGATCCGGATTTCTCCTTCACCGACGGGAAAAACCTAATTCAGAAATTCAGTCGAAATTGGCGAATCTATGGGAGAGCCGGCCGTGTTCCATCGATTTCCCACCTAATTCCATGGAATTGGAGGATTTCGATGCGGAATCGATTCTGGATGAGGAAATCGAGGAAGGAATCGACAGTATTTTGGGGAATCTGGGTGTGGAAACCCTAGAAACGGCTAATTCGGCGCAAGATTCATGGAATTGTTACTGGAATCCAATCGGCTTAGGATTCAAACAGAGATCCGAATTTGGATTCGGAATGCGGAAGGCGATGGAACGAGCAGCGATCCGACGAGTCGACGACGGAAACTGGTGGCGATTTCCGACCGTCGATGTAGTCGAGATCTCTCCGAAACTATACTCGAAGCCACCGGCTACGGCGGAGCCGACACCGGCCGCCGTCGCAACGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAACTTACATTGATTGAAGGGAAGGAGAAATCGGAGACGCCGGCGACGATTCCGAAATCAAAACCTCCTGGTTTGCTTCTGAAACTGAACTTCAACGCCGTCGCCGACGCTTGGTCCGATCGGGGATCTCCATTCTCCGACGAGATTCCGAGATCCATAGCAGCGGGAAGTGATGTAAATCTACGTCTCTCATCTCGCGCTCGAAAATCAAAACCCAAAAAATTACTCTGAAAATAAATAATTAATAAATAAAAACTTCCTCCTGAAGTTCTAGGAATCCATTTTTCTTAGTCGCTCTTTTATTCTCCCATTAAATTAAATTAGTGTTAAGTTTGTATTTTTTAGTTTTATGTTTGGTTTTTATTTATTTATTTACAAAATGCTTATTTTATTTTAGTTTCCATTATTCAATATCCAACAAATCCTACATAATATGAGAGTCAAATACCGATTTTTGGACTCGAACTTGTGACATAGAGTTGAAATGGATTAACACCAGCCAAGATAATCAACTACACCTCTAATCCTTGATAATATTTCTCACGTTGTTTTCATGTATTTAATCATTATTAACAAATTTCAAAAAAAAAACCCCACTATTAGCACGCTAAACTAAAGTTGAATTTTAAAAAATAGTTGGGTATTTTTTTTTAAATGCTTATTTTATTTTAGTTTCTATTATTTAATATTTTTGAAGTCTTTTAATTTTCATTTTTTTAGTACAAATTAGAAGAAGATCACCAACAAACCTTAAATGACACAATTACTCATAAATAATATAATAGTCAAATATCGATTTTCAAGTTCAAACTCATGACCGTGAAGTTAAAATGGATTAAAGGGTATTATTGTAATGACAAATTAATGAATTAATAAAGCAAATATTTTTTTTAATTTGGCACATTTACCAGAAAAAAAGAAGCTCTTATCATCATTATTATCCCTCAATTATTTATTTATTGTTTTGTAACCATCAATTCTAATTCAATTTTCTTTTTTCATAAAATATTTTCTTAAATTTATTAAATTTTACCGTACCCATCCACCTTCATATTACGCGTTACTAATAATTGTTCCATTATACAATTAAGTAAAAAAAACTTATATAAAGAAGTTTTATTTTTTTTCTTTTAGTTATATTTACATAAGTCAAAGTTTATTTATTTAAATAAATTATAAATTATTTATTTAAATAAATTATAAATAATAATAATATATTAATTATCATTATAAACACACATATAATTAAAAAGTCCGGTCGTTACAAGAACTCAATCAGTAATAAAATGAATTAGTTTCACCACAAGCTGTTTAGTGATTGAATCTATCAATTTTTTAAGTGGTTAAAACTATCACTTTCCTAGTGATAGAATCTATCAACTTCTTAGTGATATAATTTATCATTTCCTAGTGATAGAATTTATGAGTTTTTTATTCTTGAGGATAAAATTTATCATTTCTTAGTGATAGAATCTACCAACAAACTAATGAAAGCTATCAGTAAAAAACTAATTAAAGGCTATCAGTTAAAAACCAACTGAAAGCTATCAACTAAAATTGATTGAATGCTATCAGTTAAAAAATGATTATATATATAATATGTATAGGTATGTAAAATAAATTAAAAAATAGATTTTTAGTATACTTGTAAGCCTTCTAAAACAAGAATACACACTATTAAAATAGGTATTAGGTTGAAATATAGTATCGTACATATTCTTTAAACATATTTGTGAGCTTATGAGTTGAATCTTAGATAGAAAAAGGAAAGTTACATAACCCGAGAACCCAACCCAACCCAGCTCGGGTTGGGTTGCGTTTATGCATAGGGATGGAAAATTGACCAACCCAACAAATTGGGTTGGTCCAAAAAAATTAATCAATCCTACCCAACTCGGACCATGTACACCCCTATTTGTGTTATATGTACATTCATTTGA

mRNA sequence

ATGTCTTCTCCTTGCATAAGTGGAGGTGGAAGAGGTTACAATTTCAACCTGGAAATTGTGAAATCTCCATCATCTTCATGGACAGGAACTTCTCAAACTTCATCCCCTTCTTCAACTCTCTCTGAATCAAGCAATTCACAGCTAGCAATTTCAACAAGAAAATCCAGAGCTCCTAGAAAACGCCCAAATCAAACCTACAATGAGGCAACAGTTTTGCTATCTACAGCGTATCCAAACGTTTTCTCTACCAAACACCTCACCAATCCACAAAAGTTCACCAAATCTCACGATTCTCTGTTCGGCAAATCGGTCGATTTGTTGATGCCTGGATCCGGATTTCTCCTTCACCGACGGGAAAAACCTAATTCAGAAATTCAGTCGAAATTGGCGAATCTATGGGAGAGCCGGCCGTGTTCCATCGATTTCCCACCTAATTCCATGGAATTGGAGGATTTCGATGCGGAATCGATTCTGGATGAGGAAATCGAGGAAGGAATCGACAGTATTTTGGGGAATCTGGGTGTGGAAACCCTAGAAACGGCTAATTCGGCGCAAGATTCATGGAATTGTTACTGGAATCCAATCGGCTTAGGATTCAAACAGAGATCCGAATTTGGATTCGGAATGCGGAAGGCGATGGAACGAGCAGCGATCCGACGAGTCGACGACGGAAACTGGTGGCGATTTCCGACCGTCGATGTAGTCGAGATCTCTCCGAAACTATACTCGAAGCCACCGGCTACGGCGGAGCCGACACCGGCCGCCGTCGCAACGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAACTTACATTGATTGAAGGGAAGGAGAAATCGGAGACGCCGGCGACGATTCCGAAATCAAAACCTCCTGGTTTGCTTCTGAAACTGAACTTCAACGCCGTCGCCGACGCTTGGTCCGATCGGGGATCTCCATTCTCCGACGAGATTCCGAGATCCATAGCAGCGGGAAGTGATTATACTTGTAAGCCTTCTAAAACAAGAATACACACTATTAAAATAGGTATTAGGTTGAAATATAGTATCGGATGGAAAATTGACCAACCCAACAAATTGGGTTGGTCCAAAAAAATTAATCAATCCTACCCAACTCGGACCATGTACACCCCTATTTGTGTTATATGTACATTCATTTGA

Coding sequence (CDS)

ATGTCTTCTCCTTGCATAAGTGGAGGTGGAAGAGGTTACAATTTCAACCTGGAAATTGTGAAATCTCCATCATCTTCATGGACAGGAACTTCTCAAACTTCATCCCCTTCTTCAACTCTCTCTGAATCAAGCAATTCACAGCTAGCAATTTCAACAAGAAAATCCAGAGCTCCTAGAAAACGCCCAAATCAAACCTACAATGAGGCAACAGTTTTGCTATCTACAGCGTATCCAAACGTTTTCTCTACCAAACACCTCACCAATCCACAAAAGTTCACCAAATCTCACGATTCTCTGTTCGGCAAATCGGTCGATTTGTTGATGCCTGGATCCGGATTTCTCCTTCACCGACGGGAAAAACCTAATTCAGAAATTCAGTCGAAATTGGCGAATCTATGGGAGAGCCGGCCGTGTTCCATCGATTTCCCACCTAATTCCATGGAATTGGAGGATTTCGATGCGGAATCGATTCTGGATGAGGAAATCGAGGAAGGAATCGACAGTATTTTGGGGAATCTGGGTGTGGAAACCCTAGAAACGGCTAATTCGGCGCAAGATTCATGGAATTGTTACTGGAATCCAATCGGCTTAGGATTCAAACAGAGATCCGAATTTGGATTCGGAATGCGGAAGGCGATGGAACGAGCAGCGATCCGACGAGTCGACGACGGAAACTGGTGGCGATTTCCGACCGTCGATGTAGTCGAGATCTCTCCGAAACTATACTCGAAGCCACCGGCTACGGCGGAGCCGACACCGGCCGCCGTCGCAACGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAACTTACATTGATTGAAGGGAAGGAGAAATCGGAGACGCCGGCGACGATTCCGAAATCAAAACCTCCTGGTTTGCTTCTGAAACTGAACTTCAACGCCGTCGCCGACGCTTGGTCCGATCGGGGATCTCCATTCTCCGACGAGATTCCGAGATCCATAGCAGCGGGAAGTGATTATACTTGTAAGCCTTCTAAAACAAGAATACACACTATTAAAATAGGTATTAGGTTGAAATATAGTATCGGATGGAAAATTGACCAACCCAACAAATTGGGTTGGTCCAAAAAAATTAATCAATCCTACCCAACTCGGACCATGTACACCCCTATTTGTGTTATATGTACATTCATTTGA

Protein sequence

MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMPGSGFLLHRREKPNSEIQSKLANLWESRPCSIDFPPNSMELEDFDAESILDEEIEEGIDSILGNLGVETLETANSAQDSWNCYWNPIGLGFKQRSEFGFGMRKAMERAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLIEGKEKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCKPSKTRIHTIKIGIRLKYSIGWKIDQPNKLGWSKKINQSYPTRTMYTPICVICTFI

Homology

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BLAST of Sed0025374 vs. NCBI nr
Match: XP_022965486.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita maxima])

HSP 1 Score: 476.9 bits (1226), Expect = 1.7e-130
Identity = 261/354 (73.73%), Postives = 285/354 (80.51%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRK 60
           MSSP ISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSE      AISTRKSR PRK
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRK 60

Query: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMP-----GSGFLL 120
           RPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKS DSLF +S +LL+P      SGFLL
Sbjct: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSPDSLFCESAELLLPFRVIESSGFLL 120

Query: 121 HR---REKPNSEIQSKLANLWESRPCS----IDFPPNSMELEDFDAESILDEEIEEGIDS 180
           ++    EKPNS+IQSKLANLWESRPCS    IDF PNSME+EDFDAESILDEE+EEGIDS
Sbjct: 121 NQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDS 180

Query: 181 ILGNLGVETLETANSAQD-------SWNCYWNPIGLGFKQRSEFGFGMRKAMERAAIRRV 240
           I+GNL V+ LET NSAQD       +WNCYWNPIGLGF Q+ EFGFGMRKA+ERAAIRRV
Sbjct: 181 IMGNLSVDNLETPNSAQDCSSDNPKNWNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRV 240

Query: 241 DDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLIEG------K 300
           DDGNWWRFPTVDVV+ISPKL  KPPA   PTP   +TKKKKKKKV+KLT+IE       K
Sbjct: 241 DDGNWWRFPTVDVVDISPKLNPKPPA---PTPTVASTKKKKKKKVEKLTVIESKKTAPPK 300

Query: 301 EKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCK 330
           EKS    TIPKSKPPGLLLKLN+ AVADAWS RGSPF+D    S +AG+D   +
Sbjct: 301 EKSSEKPTIPKSKPPGLLLKLNYEAVADAWSARGSPFTDNHMGSKSAGNDVNAR 345

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BLAST of Sed0025374 vs. NCBI nr
Match: KAG6586108.1 (Protein CHLOROPLAST IMPORT APPARATUS 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020932.1 Protein CHLOROPLAST IMPORT APPARATUS 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474.9 bits (1221), Expect = 6.4e-130
Identity = 264/354 (74.58%), Postives = 286/354 (80.79%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRK 60
           MSSP ISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSE      AISTRKSR PRK
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRK 60

Query: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMP-----GSGFLL 120
           RPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKSHDSLF +S +LL+P      SGFLL
Sbjct: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLL 120

Query: 121 HR---REKPNSEIQSKLANLWESRPCS----IDFPPNSMELEDFDAESILDEEIEEGIDS 180
           ++    EKPNS+IQSKLANLWESRPCS    IDF PNSME+EDFDAESILDEE+EEGIDS
Sbjct: 121 NQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDS 180

Query: 181 ILGNLGVETLETANSAQD-------SWNCYWNPIGLGFKQRSEFGFGMRKAMERAAIRRV 240
           I+GNL V+ LETANSAQD       + NCYWNPIGLGF Q+ EFGFGMRKA+ERAAIRRV
Sbjct: 181 IMGNLSVDNLETANSAQDCSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRV 240

Query: 241 DDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLIEG------K 300
           DDGNWWRFPTVDVV ISPKL  KPPA   PTP  VA+ KKKKKKV+KLT+IE       K
Sbjct: 241 DDGNWWRFPTVDVVAISPKLNPKPPA---PTP-TVASTKKKKKKVEKLTVIESKKTAPPK 300

Query: 301 EKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCK 330
           EKS    TIPKSKPPGLLLKLN+ AVADAWS RGSPFSD  P S +AG+D   +
Sbjct: 301 EKSSEKPTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNAR 344

[Close]

BLAST of Sed0025374 vs. NCBI nr
Match: XP_022937796.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata])

HSP 1 Score: 474.9 bits (1221), Expect = 6.4e-130
Identity = 264/354 (74.58%), Postives = 286/354 (80.79%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRK 60
           MSSP ISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSE      AISTRKSR PRK
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRK 60

Query: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMP-----GSGFLL 120
           RPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKSHDSLF +S +LL+P      SGFLL
Sbjct: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLL 120

Query: 121 HR---REKPNSEIQSKLANLWESRPCS----IDFPPNSMELEDFDAESILDEEIEEGIDS 180
           ++    EKPNS+IQSKLANLWESRPCS    IDF PNSME+EDFDAESILDEE+EEGIDS
Sbjct: 121 NQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDS 180

Query: 181 ILGNLGVETLETANSAQD-------SWNCYWNPIGLGFKQRSEFGFGMRKAMERAAIRRV 240
           I+GNL V+ LETANSAQD       + NCYWNPIGLGF Q+ EFGFGMRKA+ERAAIRRV
Sbjct: 181 IMGNLSVDNLETANSAQDCSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRV 240

Query: 241 DDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLIEG------K 300
           DDGNWWRFPTVDVV ISPKL  KPPA   PTP  VA+ KKKKKKV+KLT+IE       K
Sbjct: 241 DDGNWWRFPTVDVVAISPKLNPKPPA---PTP-TVASTKKKKKKVEKLTVIESKKTAPPK 300

Query: 301 EKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCK 330
           EKS    TIPKSKPPGLLLKLN+ AVADAWS RGSPFSD  P S +AG+D   +
Sbjct: 301 EKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNAR 344

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BLAST of Sed0025374 vs. NCBI nr
Match: XP_023537773.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.6 bits (1220), Expect = 8.3e-130
Identity = 263/354 (74.29%), Postives = 287/354 (81.07%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRK 60
           MSSP ISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSE      AISTRKSR PRK
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRK 60

Query: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMP-----GSGFLL 120
           RPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKSHDSLF +S +LL+P      SGFLL
Sbjct: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLL 120

Query: 121 HR---REKPNSEIQSKLANLWESRPCS----IDFPPNSMELEDFDAESILDEEIEEGIDS 180
           ++    EKPNS+IQSKLANLWESRPCS    IDF PNSME+EDFDAESILDEE+EEGIDS
Sbjct: 121 NQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDS 180

Query: 181 ILGNLGVETLETANSAQD-------SWNCYWNPIGLGFKQRSEFGFGMRKAMERAAIRRV 240
           I+GNL V+ LETANSAQD       + NCYWNPIGLGF Q+ EFGFGMRKA+ERAAIRRV
Sbjct: 181 IMGNLSVDNLETANSAQDCSSDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRV 240

Query: 241 DDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLIEG------K 300
           DDGNWWRFPTVDVV+ISPKL  KPPA   PTP  VA+ KKKKKK++KLT+IE       K
Sbjct: 241 DDGNWWRFPTVDVVDISPKLNPKPPA---PTP-TVASTKKKKKKMEKLTVIESKKTAPPK 300

Query: 301 EKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCK 330
           EKS    TIPKSKPPGLLLKLN+ AVADAWS RGSPFSD  P S +AG+D   +
Sbjct: 301 EKSSENPTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNAR 344

[Close]

BLAST of Sed0025374 vs. NCBI nr
Match: XP_038890140.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 471.1 bits (1211), Expect = 9.2e-129
Identity = 266/370 (71.89%), Postives = 288/370 (77.84%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESS-NSQLAISTRKSRAPR 60
           MSSPCISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSESS N+QLAISTRKSR PR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMP-----GSGFL 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKSHDSLF +S +LL+P      SGFL
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFL 120

Query: 121 LHR----REKPNSEIQSKLANLWESRPCS----IDFPPNSM---ELEDFDAESILDEEIE 180
           LH+     E+PNS+I SKL NLWE+RPCS    IDF PNSM   E+EDFDAESILDEEIE
Sbjct: 121 LHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEIE 180

Query: 181 EGIDSILGNLGVETLETANSAQDS----------WNCYWNPIGLGFKQRSEFGFGMRKAM 240
           EGIDSI+GNL V+ LET NS QDS          WNCYW+PIGLGF Q+ E GFGMRK +
Sbjct: 181 EGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKGI 240

Query: 241 ERAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLIE 300
           ER AIR VD+GNWWRFPTVDVVEISPKL  KPP  A P P+AVAT KKKKKKV+KLT+IE
Sbjct: 241 ERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPA-PAPSAVAT-KKKKKKVEKLTVIE 300

Query: 301 GK--------------EKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRS 330
            K              EKSE P  IPK KP GLLLKLN+ AVADAWS RGSPFSDEIP S
Sbjct: 301 SKKAAMPLQKEKLEKSEKSEKP--IPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGS 360

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BLAST of Sed0025374 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-42
Identity = 147/370 (39.73%), Postives = 187/370 (50.54%), Query Frame = 0


Query: 3   SPCISGGGRG---YNFNLEIVKS-PSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAP 62
           S C+S GG G   Y+F LE VKS P SS T T++ +SPSST+SESSNS LAISTRK R  
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRTQ 61

Query: 63  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLF--------GKSVDLLMPG 122
           RKRPNQTYNEA  LLSTAYPN+FS+ +L++ QK   S +S F          + DLL+P 
Sbjct: 62  RKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLLPY 121

Query: 123 SG-----FLLHRREKPNSEIQSKLANLWESRPC------SIDFPPNSMELEDFDAESILD 182
                  FL H   +  +E  S    +     C        DF       ++FDAESILD
Sbjct: 122 ESIEEPDFLFHPTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAESILD 181

Query: 183 EEIEEGIDSILG-------NLGVETLETANSAQDSWNCYWNPIG-------LGFKQRSEF 242
           E+IEEGIDSI+G       N G+                 N IG       +    RS  
Sbjct: 182 EDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNRSSN 241

Query: 243 GFGMRKAME-RAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPATAEPT------------ 302
           GF     +  R+A+R  DD   W+  TVD  +ISP++ +    TA  T            
Sbjct: 242 GFNFPLGLGLRSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAISTVDEEKSDGKKVV 301

Query: 303 -PAAVATKKKKKKKVKKLTLIEGKEKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSP 322
                + KKKKKKK+   T +  + KS         K  G LLKL+++ V +AWSD+ SP
Sbjct: 302 ISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDYDGVLEAWSDKTSP 361

[Close]

BLAST of Sed0025374 vs. ExPASy TrEMBL
Match: A0A6J1HLT7 (protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465375 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 8.1e-131
Identity = 261/354 (73.73%), Postives = 285/354 (80.51%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRK 60
           MSSP ISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSE      AISTRKSR PRK
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRK 60

Query: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMP-----GSGFLL 120
           RPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKS DSLF +S +LL+P      SGFLL
Sbjct: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSPDSLFCESAELLLPFRVIESSGFLL 120

Query: 121 HR---REKPNSEIQSKLANLWESRPCS----IDFPPNSMELEDFDAESILDEEIEEGIDS 180
           ++    EKPNS+IQSKLANLWESRPCS    IDF PNSME+EDFDAESILDEE+EEGIDS
Sbjct: 121 NQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDS 180

Query: 181 ILGNLGVETLETANSAQD-------SWNCYWNPIGLGFKQRSEFGFGMRKAMERAAIRRV 240
           I+GNL V+ LET NSAQD       +WNCYWNPIGLGF Q+ EFGFGMRKA+ERAAIRRV
Sbjct: 181 IMGNLSVDNLETPNSAQDCSSDNPKNWNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRV 240

Query: 241 DDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLIEG------K 300
           DDGNWWRFPTVDVV+ISPKL  KPPA   PTP   +TKKKKKKKV+KLT+IE       K
Sbjct: 241 DDGNWWRFPTVDVVDISPKLNPKPPA---PTPTVASTKKKKKKKVEKLTVIESKKTAPPK 300

Query: 301 EKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCK 330
           EKS    TIPKSKPPGLLLKLN+ AVADAWS RGSPF+D    S +AG+D   +
Sbjct: 301 EKSSEKPTIPKSKPPGLLLKLNYEAVADAWSARGSPFTDNHMGSKSAGNDVNAR 345

[Close]

BLAST of Sed0025374 vs. ExPASy TrEMBL
Match: A0A6J1FBD7 (protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444083 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 3.1e-130
Identity = 264/354 (74.58%), Postives = 286/354 (80.79%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRK 60
           MSSP ISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSE      AISTRKSR PRK
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRK 60

Query: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMP-----GSGFLL 120
           RPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKSHDSLF +S +LL+P      SGFLL
Sbjct: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLL 120

Query: 121 HR---REKPNSEIQSKLANLWESRPCS----IDFPPNSMELEDFDAESILDEEIEEGIDS 180
           ++    EKPNS+IQSKLANLWESRPCS    IDF PNSME+EDFDAESILDEE+EEGIDS
Sbjct: 121 NQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDS 180

Query: 181 ILGNLGVETLETANSAQD-------SWNCYWNPIGLGFKQRSEFGFGMRKAMERAAIRRV 240
           I+GNL V+ LETANSAQD       + NCYWNPIGLGF Q+ EFGFGMRKA+ERAAIRRV
Sbjct: 181 IMGNLSVDNLETANSAQDCSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRV 240

Query: 241 DDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLIEG------K 300
           DDGNWWRFPTVDVV ISPKL  KPPA   PTP  VA+ KKKKKKV+KLT+IE       K
Sbjct: 241 DDGNWWRFPTVDVVAISPKLNPKPPA---PTP-TVASTKKKKKKVEKLTVIESKKTAPPK 300

Query: 301 EKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCK 330
           EKS    TIPKSKPPGLLLKLN+ AVADAWS RGSPFSD  P S +AG+D   +
Sbjct: 301 EKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNAR 344

[Close]

BLAST of Sed0025374 vs. ExPASy TrEMBL
Match: A0A6J1D908 (protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC111018157 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 2.5e-127
Identity = 267/396 (67.42%), Postives = 305/396 (77.02%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRK 60
           MSSPCISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSESSN+QLAISTRKSR PRK
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNTQLAISTRKSRTPRK 60

Query: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLFGKSVDLLMP-----GSGFLL 120
           RPNQTYNEATVLLST YPNVFSTKHLTNP+KFTK HDSLF +S +LL+P      SGFLL
Sbjct: 61  RPNQTYNEATVLLSTVYPNVFSTKHLTNPRKFTKPHDSLFCESAELLLPFRVIDSSGFLL 120

Query: 121 HR---REKPNSEIQSKLANLWESRPCS----IDFPPNSMEL-------EDFDAESILDEE 180
           H+   +EKPNS+IQ+KLANLWE RPCS    IDF PNSME+       +DFDAESILDEE
Sbjct: 121 HQPLLQEKPNSQIQTKLANLWEGRPCSSPGEIDFQPNSMEIDGGCGQDDDFDAESILDEE 180

Query: 181 IEEGIDSILGNLGVETLETANSAQD-------SWNCYWN--PIGLGFKQRSEFGFGMRKA 240
           IEEGIDSI+GNL V+ LETANS QD       +WNCYWN  PIGLG  Q+ EFGFGM+KA
Sbjct: 181 IEEGIDSIMGNLSVDNLETANSPQDYSCTNPRNWNCYWNNPPIGLGLNQKFEFGFGMQKA 240

Query: 241 MERAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPATAEPTPAAVATKKKKKKKVKKLTLI 300
            ERAAIR+V+DGNWWRFPTVDVVEISPKL +KPPA     PAAV+T KKKKKK++KLT+I
Sbjct: 241 TERAAIRQVEDGNWWRFPTVDVVEISPKL-NKPPA-----PAAVST-KKKKKKMEKLTVI 300

Query: 301 EGKEKSETP----ATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTC 360
           E K+ +  P       PKSK PGLLLKLN+ AVADAWSDRGSPFSDEIP S  AG+D   
Sbjct: 301 ETKKAATIPQKDQKPTPKSK-PGLLLKLNYEAVADAWSDRGSPFSDEIPGSDTAGNDVNT 360

Query: 361 KPSKTRIHTIKIGIRLKYSIGWKIDQPNKLGWSKKI 365
           + ++  +     G+  + S+    ++     +SKKI
Sbjct: 361 RLAQVDLFLDSGGLLREASVLRYKEKRRTRLFSKKI 388

[Close]

BLAST of Sed0025374 vs. ExPASy TrEMBL
Match: A0A0A0LGV4 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 1.1e-124
Identity = 270/407 (66.34%), Postives = 300/407 (73.71%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSN--SQLAISTRKSRAP 60
           MSSPCISGGGR YNF+LEI+KSPSSSWT TSQTSSPSSTLSESSN  +QLAISTRK R P
Sbjct: 1   MSSPCISGGGRAYNFDLEILKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHD---SLFGKSVDLLMP-----G 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKSHD   SLF +S +LL+P      
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHR---REKPNSEIQSKLANLWESRPCS----IDFPPNSM---ELEDFDAESILDE 180
           SGFLLH+    EKPNS+I SKL NLWE+RPCS    IDF PNSM   E+EDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSILGNLGVETLETANSAQDS----------WNCYWNPIGLGFKQRSEFGFGMR 240
           EIEEGIDSI+GNL V+ LE  NS QDS          WN  WNPIGLGF Q+ E GFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KAMERAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPA-----TAEPTPAAVATKKKKKKK 300
           K +ER AIR VD+GNWWRFPTVDV+EISPKL  KPPA     T  PTPAAV+T KKKKKK
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPTPTPTPTPAAVST-KKKKKK 300

Query: 301 VKKLTLIEG--------KEKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSDEIP 360
           V+KLT+IE         KEKSE P  IPK KP GLLLKLN+ AVADAWS RGSPFSDEIP
Sbjct: 301 VEKLTVIESKKAAIPLQKEKSEKP--IPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 RSIAAGSDYTCKPSKTRIHTIKIGIRLKYSIGWKIDQPNKLGWSKKI 365
            S  AGSD   + +   + T   G+  + S+    ++     +SKKI
Sbjct: 361 SSDTAGSDVNARVANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKI 402

[Close]

BLAST of Sed0025374 vs. ExPASy TrEMBL
Match: A0A1S3BQX8 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 1.1e-124
Identity = 271/410 (66.10%), Postives = 300/410 (73.17%), Query Frame = 0


Query: 1   MSSPCISGGGRGYNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSN--SQLAISTRKSRAP 60
           MSSPCISGGGR YNF+LEIVKSPSSSWT TSQTSSPSSTLSESSN  +QLAISTRK R P
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHD---SLFGKSVDLLMP-----G 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNP+KFTKSHD   SLF +S +LL+P      
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHR---REKPNSEIQSKLANLWESRPCS----IDFPPNSM---ELEDFDAESILDE 180
           SGFLLH+    EKPNS+I SKL NLWE+RPCS    IDF PNSM   E+EDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSILGNLGVETLETANSAQDS----------WNCYWNPIGLGFKQRSEFGFGMR 240
           EIEEGIDSI+GNL V+ LE  NS QDS          WN  WNPIGLGF Q+ E GFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KAMERAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPA-----TAEPTPAAVATKKKKKKK 300
           K +ER AIR VD+GNWWRFPTVDV+EISPKL  KPPA     T  PTPAAV+T KKKKKK
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVST-KKKKKK 300

Query: 301 VKKLTLIEGK-----------EKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSPFSD 360
           V+KLT+IE K           EKSE P  IPK KP GLLLKLN+ AVADAWS RGSPFSD
Sbjct: 301 VEKLTVIESKKAAIPLQKEKSEKSEKP--IPKLKPAGLLLKLNYEAVADAWSSRGSPFSD 360

Query: 361 EIPRSIAAGSDYTCKPSKTRIHTIKIGIRLKYSIGWKIDQPNKLGWSKKI 365
           EIP S  AGSD   + +   + T   G+  + S+    ++     +SKKI
Sbjct: 361 EIPSSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKI 405

[Close]

BLAST of Sed0025374 vs. TAIR 10
Match: AT5G57180.2 (chloroplast import apparatus 2 )

HSP 1 Score: 175.3 bits (443), Expect = 9.8e-44
Identity = 147/370 (39.73%), Postives = 187/370 (50.54%), Query Frame = 0


Query: 3   SPCISGGGRG---YNFNLEIVKS-PSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAP 62
           S C+S GG G   Y+F LE VKS P SS T T++ +SPSST+SESSNS LAISTRK R  
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRTQ 61

Query: 63  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLF--------GKSVDLLMPG 122
           RKRPNQTYNEA  LLSTAYPN+FS+ +L++ QK   S +S F          + DLL+P 
Sbjct: 62  RKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLLPY 121

Query: 123 SG-----FLLHRREKPNSEIQSKLANLWESRPC------SIDFPPNSMELEDFDAESILD 182
                  FL H   +  +E  S    +     C        DF       ++FDAESILD
Sbjct: 122 ESIEEPDFLFHPTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAESILD 181

Query: 183 EEIEEGIDSILG-------NLGVETLETANSAQDSWNCYWNPIG-------LGFKQRSEF 242
           E+IEEGIDSI+G       N G+                 N IG       +    RS  
Sbjct: 182 EDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNRSSN 241

Query: 243 GFGMRKAME-RAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPATAEPT------------ 302
           GF     +  R+A+R  DD   W+  TVD  +ISP++ +    TA  T            
Sbjct: 242 GFNFPLGLGLRSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAISTVDEEKSDGKKVV 301

Query: 303 -PAAVATKKKKKKKVKKLTLIEGKEKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSP 322
                + KKKKKKK+   T +  + KS         K  G LLKL+++ V +AWSD+ SP
Sbjct: 302 ISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDYDGVLEAWSDKTSP 361

[Close]

BLAST of Sed0025374 vs. TAIR 10
Match: AT5G57180.1 (chloroplast import apparatus 2 )

HSP 1 Score: 175.3 bits (443), Expect = 9.8e-44
Identity = 147/370 (39.73%), Postives = 187/370 (50.54%), Query Frame = 0


Query: 3   SPCISGGGRG---YNFNLEIVKS-PSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAP 62
           S C+S GG G   Y+F LE VKS P SS T T++ +SPSST+SESSNS LAISTRK R  
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRTQ 61

Query: 63  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLF--------GKSVDLLMPG 122
           RKRPNQTYNEA  LLSTAYPN+FS+ +L++ QK   S +S F          + DLL+P 
Sbjct: 62  RKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLLPY 121

Query: 123 SG-----FLLHRREKPNSEIQSKLANLWESRPC------SIDFPPNSMELEDFDAESILD 182
                  FL H   +  +E  S    +     C        DF       ++FDAESILD
Sbjct: 122 ESIEEPDFLFHPTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAESILD 181

Query: 183 EEIEEGIDSILG-------NLGVETLETANSAQDSWNCYWNPIG-------LGFKQRSEF 242
           E+IEEGIDSI+G       N G+                 N IG       +    RS  
Sbjct: 182 EDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNRSSN 241

Query: 243 GFGMRKAME-RAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPATAEPT------------ 302
           GF     +  R+A+R  DD   W+  TVD  +ISP++ +    TA  T            
Sbjct: 242 GFNFPLGLGLRSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAISTVDEEKSDGKKVV 301

Query: 303 -PAAVATKKKKKKKVKKLTLIEGKEKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSP 322
                + KKKKKKK+   T +  + KS         K  G LLKL+++ V +AWSD+ SP
Sbjct: 302 ISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDYDGVLEAWSDKTSP 361

[Close]

BLAST of Sed0025374 vs. TAIR 10
Match: AT5G57180.3 (chloroplast import apparatus 2 )

HSP 1 Score: 175.3 bits (443), Expect = 9.8e-44
Identity = 147/370 (39.73%), Postives = 187/370 (50.54%), Query Frame = 0


Query: 3   SPCISGGGRG---YNFNLEIVKS-PSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAP 62
           S C+S GG G   Y+F LE VKS P SS T T++ +SPSST+SESSNS LAISTRK R  
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRTQ 61

Query: 63  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPQKFTKSHDSLF--------GKSVDLLMPG 122
           RKRPNQTYNEA  LLSTAYPN+FS+ +L++ QK   S +S F          + DLL+P 
Sbjct: 62  RKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLLPY 121

Query: 123 SG-----FLLHRREKPNSEIQSKLANLWESRPC------SIDFPPNSMELEDFDAESILD 182
                  FL H   +  +E  S    +     C        DF       ++FDAESILD
Sbjct: 122 ESIEEPDFLFHPTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAESILD 181

Query: 183 EEIEEGIDSILG-------NLGVETLETANSAQDSWNCYWNPIG-------LGFKQRSEF 242
           E+IEEGIDSI+G       N G+                 N IG       +    RS  
Sbjct: 182 EDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNRSSN 241

Query: 243 GFGMRKAME-RAAIRRVDDGNWWRFPTVDVVEISPKLYSKPPATAEPT------------ 302
           GF     +  R+A+R  DD   W+  TVD  +ISP++ +    TA  T            
Sbjct: 242 GFNFPLGLGLRSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAISTVDEEKSDGKKVV 301

Query: 303 -PAAVATKKKKKKKVKKLTLIEGKEKSETPATIPKSKPPGLLLKLNFNAVADAWSDRGSP 322
                + KKKKKKK+   T +  + KS         K  G LLKL+++ V +AWSD+ SP
Sbjct: 302 ISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLDYDGVLEAWSDKTSP 361

[Close]

BLAST of Sed0025374 vs. TAIR 10
Match: AT4G25990.1 (CCT motif family protein )

HSP 1 Score: 172.6 bits (436), Expect = 6.3e-43
Identity = 146/388 (37.63%), Postives = 206/388 (53.09%), Query Frame = 0


Query: 13  YNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRKRPNQTYNEATVL 72
           Y+F LE++KSP S     + T SPSST+SE+++   +ISTR+ R PRKRPNQTY+EA  L
Sbjct: 6   YSFELEMMKSPPS-----NNTPSPSSTISETNSPPFSISTRRPRTPRKRPNQTYDEAAAL 65

Query: 73  LSTAYPNVFSTKHL-TNPQKFTKSHDSLFGKSVDLLMP-----GSGFLLHRREKPNSEIQ 132
           LSTAYP +FS+K   T      KS  S + ++  LL+P      + FL       N  I 
Sbjct: 66  LSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF------NPTIP 125

Query: 133 SKLANLWESRPCSI-DFPPNSM-ELEDFDAESILDEEIEEGIDSILGNLGVETLETANSA 192
           +K  +  E +  S  D   N    L+DFDAESILDEEIEEGIDS +GN+        ++ 
Sbjct: 126 TKTEHFLEQKEVSFDDLEVNGFGVLDDFDAESILDEEIEEGIDSFMGNI-------ESND 185

Query: 193 QDSWNCY------------WNPIGLGFKQRSEFGFGMRKAMERAAIRRVDDGNWWRFPTV 252
            D  NCY            WN        R   G G+     R+++R+ +D NWW+FPTV
Sbjct: 186 GDRENCYRVGRLEEIMKNAWN-------GRFRLGLGL-----RSSLRQNNDENWWKFPTV 245

Query: 253 DVVEISPKLYSKPPATAEPTPAAVA--------------TKKKKKKKVKKLTLIEGKEK- 312
           +  +ISP++ +   A A+   + V                KKKKKKK KK+     + K 
Sbjct: 246 EFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKKKKKKVAPAAAESKS 305

Query: 313 SETPATIPK-SKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCKPSKTRIH 365
           SE   + PK  +    LLKL+++ V +AWS + SPFSDEI  S A G D+  +  +  + 
Sbjct: 306 SEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFSDEILGSDADGVDFHVRLGEIDLF 361

[Close]

BLAST of Sed0025374 vs. TAIR 10
Match: AT4G25990.2 (CCT motif family protein )

HSP 1 Score: 172.6 bits (436), Expect = 6.3e-43
Identity = 146/388 (37.63%), Postives = 206/388 (53.09%), Query Frame = 0


Query: 13  YNFNLEIVKSPSSSWTGTSQTSSPSSTLSESSNSQLAISTRKSRAPRKRPNQTYNEATVL 72
           Y+F LE++KSP S     + T SPSST+SE+++   +ISTR+ R PRKRPNQTY+EA  L
Sbjct: 6   YSFELEMMKSPPS-----NNTPSPSSTISETNSPPFSISTRRPRTPRKRPNQTYDEAAAL 65

Query: 73  LSTAYPNVFSTKHL-TNPQKFTKSHDSLFGKSVDLLMP-----GSGFLLHRREKPNSEIQ 132
           LSTAYP +FS+K   T      KS  S + ++  LL+P      + FL       N  I 
Sbjct: 66  LSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF------NPTIP 125

Query: 133 SKLANLWESRPCSI-DFPPNSM-ELEDFDAESILDEEIEEGIDSILGNLGVETLETANSA 192
           +K  +  E +  S  D   N    L+DFDAESILDEEIEEGIDS +GN+        ++ 
Sbjct: 126 TKTEHFLEQKEVSFDDLEVNGFGVLDDFDAESILDEEIEEGIDSFMGNI-------ESND 185

Query: 193 QDSWNCY------------WNPIGLGFKQRSEFGFGMRKAMERAAIRRVDDGNWWRFPTV 252
            D  NCY            WN        R   G G+     R+++R+ +D NWW+FPTV
Sbjct: 186 GDRENCYRVGRLEEIMKNAWN-------GRFRLGLGL-----RSSLRQNNDENWWKFPTV 245

Query: 253 DVVEISPKLYSKPPATAEPTPAAVA--------------TKKKKKKKVKKLTLIEGKEK- 312
           +  +ISP++ +   A A+   + V                KKKKKKK KK+     + K 
Sbjct: 246 EFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKKKKKKVAPAAAESKS 305

Query: 313 SETPATIPK-SKPPGLLLKLNFNAVADAWSDRGSPFSDEIPRSIAAGSDYTCKPSKTRIH 365
           SE   + PK  +    LLKL+++ V +AWS + SPFSDEI  S A G D+  +  +  + 
Sbjct: 306 SEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFSDEILGSDADGVDFHVRLGEIDLF 361

The following BLAST results are available for this feature:

BLAST of Sed0025374 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965486.1	1.7e-130	73.73	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita maxima]	[more]
KAG6586108.1	6.4e-130	74.58	Protein CHLOROPLAST IMPORT APPARATUS 2, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022937796.1	6.4e-130	74.58	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata]	[more]
XP_023537773.1	8.3e-130	74.29	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_038890140.1	9.2e-129	71.89	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Benincasa hispida]	[more]

BLAST of Sed0025374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU68	1.4e-42	39.73	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]

BLAST of Sed0025374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLT7	8.1e-131	73.73	protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FBD7	3.1e-130	74.58	protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1D908	2.5e-127	67.42	protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LGV4	1.1e-124	66.34	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV...	[more]
A0A1S3BQX8	1.1e-124	66.10	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Sed0025374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57180.2	9.8e-44	39.73	chloroplast import apparatus 2	[more]
AT5G57180.1	9.8e-44	39.73	chloroplast import apparatus 2	[more]
AT5G57180.3	9.8e-44	39.73	chloroplast import apparatus 2	[more]
AT4G25990.1	6.3e-43	37.63	CCT motif family protein	[more]
AT4G25990.2	6.3e-43	37.63	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..64
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 1..329
None	No IPR available	PANTHER	PTHR31874:SF10	OS02G0148000 PROTEIN	coord: 1..329

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025374.1	Sed0025374.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus