Sed0025360 (gene) Chayote v1

Overview


Name	Sed0025360
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR71
Location	LG04: 44541231 .. 44542279 (+)
RNA-Seq Expression	Sed0025360
Synteny	Sed0025360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCACACTGCTTTCTCTGTGTGTATATATATATATTCTTCCCCTTTCATTTCTTCCCCCAATCTTCAAAGCTCTTTCATCTTCTCCAAATCAAACTCACCAAATTCATTCATTGGTTTTCAATTCTCTGTTCATCCATTCCACCATGAAGCAGTTGATTCGCCGCCTTTCTCGCGTCGCCGATTCCTCTCAATACTGTCTTCTCCGCTCCGATTCCGTCAACCTCCGCCGATCTCGTATTCTCCGATCCGCCACCGTGCCGCAAGGCCACGTCCCTGTTTACGTGGGCGAAGAAATGGAGCGATTCGTGGTGAGCGCTCATCTCCTGAACCACCCTGTGTTCGCGGAGCTCCTCGATAAATCCGCCCAAGAATACGGCTACCAACAGAAAGGCGTTCTGCATATTCCTTGTCACGTTCTGCTTTTCGAGCGCGTTGTTGAGGCTCTCAGACTCGGCGATTTCGATTCTCGCCATCTTCGAGATCTTCTTTCCAATCTCTCTGTTCCGCAGTCCTGATTTTCCTGATCTCTTGTAATTTGTTCTTTTTGGAGAGATTGTTTGTTTCTTTATTTTTCTGTGTATAGATCTTTCTGGTTTTGGTTTCTTGTAGATGGATTAGAGGACATGGATTTTTTTAGCGTCTGTTTTTCTCCTTCCGATGAAATCGTCAAGGGTATTTCTACATTCTCTCTGTTACTGAGACAGATTCTTCTTCTTCTGATGAAATTCATGTCTGGATTTGTTTGCTTTTTTTCTTACATAGCCGTTCCGAGATGAACTCGGTTACGGATCTTGATTAGAGGAAACGTAAATTGCAATTCTCGTTGGATTTTGATTTTCGGTTTTCATTGCGTTCTTGATTCTGTACTGTTGTTTTGCGATTCGCCAAAATTAGGGCAAAAACTTCGTGAAAGGAAAGAAAGTAAAGGCGAAATTATCTCAACAAAAAAAAAAAAAAAAGTAAAGGCGAAGGAATTTCAGTCGCCGGAGAATTGGGGATTCAATCACCGGCGATAACATTGGAGCAAGATCCCATCATTTGCCGCA

mRNA sequence

CCTCCACACTGCTTTCTCTGTGTGTATATATATATATTCTTCCCCTTTCATTTCTTCCCCCAATCTTCAAAGCTCTTTCATCTTCTCCAAATCAAACTCACCAAATTCATTCATTGGTTTTCAATTCTCTGTTCATCCATTCCACCATGAAGCAGTTGATTCGCCGCCTTTCTCGCGTCGCCGATTCCTCTCAATACTGTCTTCTCCGCTCCGATTCCGTCAACCTCCGCCGATCTCGTATTCTCCGATCCGCCACCGTGCCGCAAGGCCACGTCCCTGTTTACGTGGGCGAAGAAATGGAGCGATTCGTGGTGAGCGCTCATCTCCTGAACCACCCTGTGTTCGCGGAGCTCCTCGATAAATCCGCCCAAGAATACGGCTACCAACAGAAAGGCGTTCTGCATATTCCTTGTCACGTTCTGCTTTTCGAGCGCGTTGTTGAGGCTCTCAGACTCGGCGATTTCGATTCTCGCCATCTTCGAGATCTTCTTTCCAATCTCTCTGTTCCGCAGTCCTGATTTTCCTGATCTCTTGTAATTTGTTCTTTTTGGAGAGATTGTTTGTTTCTTTATTTTTCTGTGTATAGATCTTTCTGGTTTTGGTTTCTTGTAGATGGATTAGAGGACATGGATTTTTTTAGCGTCTGTTTTTCTCCTTCCGATGAAATCGTCAAGGGTATTTCTACATTCTCTCTGTTACTGAGACAGATTCTTCTTCTTCTGATGAAATTCATGTCTGGATTTGTTTGCTTTTTTTCTTACATAGCCGTTCCGAGATGAACTCGGTTACGGATCTTGATTAGAGGAAACGTAAATTGCAATTCTCGTTGGATTTTGATTTTCGGTTTTCATTGCGTTCTTGATTCTGTACTGTTGTTTTGCGATTCGCCAAAATTAGGGCAAAAACTTCGTGAAAGGAAAGAAAGTAAAGGCGAAATTATCTCAACAAAAAAAAAAAAAAAAGTAAAGGCGAAGGAATTTCAGTCGCCGGAGAATTGGGGATTCAATCACCGGCGATAACATTGGAGCAAGATCCCATCATTTGCCGCA

Coding sequence (CDS)

ATGAAGCAGTTGATTCGCCGCCTTTCTCGCGTCGCCGATTCCTCTCAATACTGTCTTCTCCGCTCCGATTCCGTCAACCTCCGCCGATCTCGTATTCTCCGATCCGCCACCGTGCCGCAAGGCCACGTCCCTGTTTACGTGGGCGAAGAAATGGAGCGATTCGTGGTGAGCGCTCATCTCCTGAACCACCCTGTGTTCGCGGAGCTCCTCGATAAATCCGCCCAAGAATACGGCTACCAACAGAAAGGCGTTCTGCATATTCCTTGTCACGTTCTGCTTTTCGAGCGCGTTGTTGAGGCTCTCAGACTCGGCGATTTCGATTCTCGCCATCTTCGAGATCTTCTTTCCAATCTCTCTGTTCCGCAGTCCTGA

Protein sequence

MKQLIRRLSRVADSSQYCLLRSDSVNLRRSRILRSATVPQGHVPVYVGEEMERFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRDLLSNLSVPQS

Homology

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BLAST of Sed0025360 vs. NCBI nr
Match: XP_022969445.1 (auxin-responsive protein SAUR71 [Cucurbita maxima])

HSP 1 Score: 217.2 bits (552), Expect = 7.7e-53
Identity = 110/124 (88.71%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS----VNLRRSRILRSATVPQGHVPVYVGEEMERFVV 60
           MKQLIRRLSRVADSSQYCLLRSDS      LRRSRILRS TVPQGHVPVYVGEEMERFVV
Sbjct: 1   MKQLIRRLSRVADSSQYCLLRSDSHAPATKLRRSRILRSGTVPQGHVPVYVGEEMERFVV 60

Query: 61  SAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRDLLS 120
           SA LLNHPVF ELLDKSAQEYGY+QKGVLHIPCHVLLFERV+EALRLGD+DSRHL+DLLS
Sbjct: 61  SAQLLNHPVFIELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYDSRHLQDLLS 120

[Close]

BLAST of Sed0025360 vs. NCBI nr
Match: XP_004139829.1 (auxin-responsive protein SAUR71 [Cucumis sativus] >KGN44276.1 hypothetical protein Csa_016216 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 111/125 (88.80%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS-----VNLRRSRILRSATVPQGHVPVYVGEEMERFV 60
           MKQLIRRLSRVADSS Y LLRSDS       LRRSRILRS+TVPQGHVPVYVGEEMERFV
Sbjct: 1   MKQLIRRLSRVADSSHYSLLRSDSPSSAAAKLRRSRILRSSTVPQGHVPVYVGEEMERFV 60

Query: 61  VSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRDLL 120
           VSAHLLNHPVF ELLDKSAQEYGYQQKGVLHIPCHVLLFERV+EALRLGDFDSRHL+DLL
Sbjct: 61  VSAHLLNHPVFIELLDKSAQEYGYQQKGVLHIPCHVLLFERVLEALRLGDFDSRHLQDLL 120

[Close]

BLAST of Sed0025360 vs. NCBI nr
Match: KAA0051102.1 (auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa] >TYK02692.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa])

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52
Identity = 110/127 (86.61%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS-------VNLRRSRILRSATVPQGHVPVYVGEEMER 60
           MKQLIRRLSRVADSSQYCLLRSDS         LRRSRILRS+TVPQGHVPVYVGEEMER
Sbjct: 1   MKQLIRRLSRVADSSQYCLLRSDSPSSAAAATKLRRSRILRSSTVPQGHVPVYVGEEMER 60

Query: 61  FVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRD 120
           FVVSA LLNHPVF ELLDKSAQEYGY+QKGVLHIPCHVLLFERV+EALRLGD+DSRHL+D
Sbjct: 61  FVVSAQLLNHPVFIELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYDSRHLQD 120

[Close]

BLAST of Sed0025360 vs. NCBI nr
Match: XP_022952057.1 (auxin-responsive protein SAUR71-like [Cucurbita moschata])

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52
Identity = 110/126 (87.30%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS------VNLRRSRILRSATVPQGHVPVYVGEEMERF 60
           MKQLIRRLSRVADSSQYCLLRSDS        LRRSRILRS TVPQGHVPVYVGEEMERF
Sbjct: 1   MKQLIRRLSRVADSSQYCLLRSDSHAAAAATKLRRSRILRSGTVPQGHVPVYVGEEMERF 60

Query: 61  VVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRDL 120
           VVSA LLNHPVF ELLDKSAQEYGY+QKGVLHIPCHVLLFERV+EALRLGD+DSRHL+DL
Sbjct: 61  VVSAQLLNHPVFIELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYDSRHLQDL 120

[Close]

BLAST of Sed0025360 vs. NCBI nr
Match: XP_038888278.1 (auxin-responsive protein SAUR71 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 110/128 (85.94%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS--------VNLRRSRILRSATVPQGHVPVYVGEEME 60
           MKQLIRRLSRVADSSQYCLLRSDS          LRRSRILRS TVPQGHVPVYVGEEME
Sbjct: 1   MKQLIRRLSRVADSSQYCLLRSDSPSAAAAAATKLRRSRILRSGTVPQGHVPVYVGEEME 60

Query: 61  RFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLR 120
           RFVVSA LLNHPVF ELLDKSAQEYGY+QKGVLHIPCHVLLFERV+EALRLGD+DSRHL+
Sbjct: 61  RFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYDSRHLQ 120

[Close]

BLAST of Sed0025360 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.2e-36
Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSD-------SVNLRRSRILR-----SATVPQGHVPVYVG 60
           MKQLIRRLSRVADS+QY LLRSD       S +  RS + R     +++VP+GHVPVYVG
Sbjct: 1   MKQLIRRLSRVADSAQYSLLRSDSQRPSRRSESFLRSSVTRRSKKQTSSVPEGHVPVYVG 60

Query: 61  EEMERFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLG 105
           +EMERFVVSA LLNHPVF  LL++SAQEYGY+QKGVL IPCHVL+FER++E+LRLG
Sbjct: 61  DEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESLRLG 116

[Close]

BLAST of Sed0025360 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.8e-36
Identity = 74/104 (71.15%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDSVNLRRSRILRSATVPQGHVPVYVGEEMERFVVSAHL 60
           MKQLIRRLSRVADS+QY LLRS+S   R  +    + VP+GHVPVYVG EMERFVV+A L
Sbjct: 1   MKQLIRRLSRVADSTQYSLLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAEL 60

Query: 61  LNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLG 105
           LNHPVF  LL +SAQEYGY+Q+GVL IPCHVL+FER++E+LRLG
Sbjct: 61  LNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESLRLG 104

[Close]

BLAST of Sed0025360 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.3e-34
Identity = 79/135 (58.52%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDSVNLRRSR----------------ILRSATVPQGHVP 60
           MK LIRRLSRVADSS    +R  + + R  R                  R  TVP GHVP
Sbjct: 1   MKHLIRRLSRVADSSSEFSIRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNTVPAGHVP 60

Query: 61  VYVGEEMERFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLG 119
           VYVGEEMERFVVSA L+NHP+F  LL++SAQEYGY QKGVLHIPCHV++FERVVE LRLG
Sbjct: 61  VYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETLRLG 120

[Close]

BLAST of Sed0025360 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-28
Identity = 72/129 (55.81%), Postives = 89/129 (68.99%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDSVNLRRS----------RILRSATVPQGHVPVYVGEE 60
           MK LIRRLSR+ADSS     RS  ++   S          R   +++VP GHVPV VGE+
Sbjct: 1   MKPLIRRLSRIADSSSCNRNRSGDIHHPTSTYSSSVFLVKRATVASSVPSGHVPVNVGED 60

Query: 61  MERFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRH 120
            ERFVVSA LLNHPVF  LL++SAQEYGY QKGVLHIPC+V +FE+VVE+LR G  D   
Sbjct: 61  KERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSGIADD-- 120

[Close]

BLAST of Sed0025360 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.6e-11
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 24  SVNLRRSRILRSATVPQGHVPVYV---GEEMERFVVSAHLLNHPVFAELLDKSAQEYGYQ 83
           S  L R + ++   VP+G + + V   GEE +RF+V     NHP+F +LL ++  EYG+ 
Sbjct: 10  SFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFD 69

Query: 84  QKGVLHIPCHVLLFERVVEALRLGD 106
           QKG + IPCHV  F R V+AL  G+
Sbjct: 70  QKGTITIPCHVEEF-RYVQALIDGE 93

[Close]

BLAST of Sed0025360 vs. ExPASy TrEMBL
Match: A0A6J1HZY4 (auxin-responsive protein SAUR71 OS=Cucurbita maxima OX=3661 GN=LOC111468444 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.7e-53
Identity = 110/124 (88.71%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS----VNLRRSRILRSATVPQGHVPVYVGEEMERFVV 60
           MKQLIRRLSRVADSSQYCLLRSDS      LRRSRILRS TVPQGHVPVYVGEEMERFVV
Sbjct: 1   MKQLIRRLSRVADSSQYCLLRSDSHAPATKLRRSRILRSGTVPQGHVPVYVGEEMERFVV 60

Query: 61  SAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRDLLS 120
           SA LLNHPVF ELLDKSAQEYGY+QKGVLHIPCHVLLFERV+EALRLGD+DSRHL+DLLS
Sbjct: 61  SAQLLNHPVFIELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYDSRHLQDLLS 120

[Close]

BLAST of Sed0025360 vs. ExPASy TrEMBL
Match: A0A0A0K901 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238400 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.9e-53
Identity = 111/125 (88.80%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS-----VNLRRSRILRSATVPQGHVPVYVGEEMERFV 60
           MKQLIRRLSRVADSS Y LLRSDS       LRRSRILRS+TVPQGHVPVYVGEEMERFV
Sbjct: 1   MKQLIRRLSRVADSSHYSLLRSDSPSSAAAKLRRSRILRSSTVPQGHVPVYVGEEMERFV 60

Query: 61  VSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRDLL 120
           VSAHLLNHPVF ELLDKSAQEYGYQQKGVLHIPCHVLLFERV+EALRLGDFDSRHL+DLL
Sbjct: 61  VSAHLLNHPVFIELLDKSAQEYGYQQKGVLHIPCHVLLFERVLEALRLGDFDSRHLQDLL 120

[Close]

BLAST of Sed0025360 vs. ExPASy TrEMBL
Match: A0A5A7U5G4 (Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00200 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.4e-53
Identity = 110/127 (86.61%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS-------VNLRRSRILRSATVPQGHVPVYVGEEMER 60
           MKQLIRRLSRVADSSQYCLLRSDS         LRRSRILRS+TVPQGHVPVYVGEEMER
Sbjct: 1   MKQLIRRLSRVADSSQYCLLRSDSPSSAAAATKLRRSRILRSSTVPQGHVPVYVGEEMER 60

Query: 61  FVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRD 120
           FVVSA LLNHPVF ELLDKSAQEYGY+QKGVLHIPCHVLLFERV+EALRLGD+DSRHL+D
Sbjct: 61  FVVSAQLLNHPVFIELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYDSRHLQD 120

[Close]

BLAST of Sed0025360 vs. ExPASy TrEMBL
Match: A0A6J1GJB9 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111454824 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.4e-53
Identity = 110/126 (87.30%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS------VNLRRSRILRSATVPQGHVPVYVGEEMERF 60
           MKQLIRRLSRVADSSQYCLLRSDS        LRRSRILRS TVPQGHVPVYVGEEMERF
Sbjct: 1   MKQLIRRLSRVADSSQYCLLRSDSHAAAAATKLRRSRILRSGTVPQGHVPVYVGEEMERF 60

Query: 61  VVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLRDL 120
           VVSA LLNHPVF ELLDKSAQEYGY+QKGVLHIPCHVLLFERV+EALRLGD+DSRHL+DL
Sbjct: 61  VVSAQLLNHPVFIELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYDSRHLQDL 120

[Close]

BLAST of Sed0025360 vs. ExPASy TrEMBL
Match: A0A1S3CSH0 (auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103504274 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.3e-53
Identity = 110/128 (85.94%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDS--------VNLRRSRILRSATVPQGHVPVYVGEEME 60
           MKQLIRRLSRVADSSQYCLLRSDS          LRRSRILRS+TVPQGHVPVYVGEEME
Sbjct: 1   MKQLIRRLSRVADSSQYCLLRSDSPSSAAAAATKLRRSRILRSSTVPQGHVPVYVGEEME 60

Query: 61  RFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRHLR 120
           RFVVSA LLNHPVF ELLDKSAQEYGY+QKGVLHIPCHVLLFERV+EALRLGD+DSRHL+
Sbjct: 61  RFVVSAQLLNHPVFIELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGDYDSRHLQ 120

[Close]

BLAST of Sed0025360 vs. TAIR 10
Match: AT3G12830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 151.8 bits (382), Expect = 3.7e-37
Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSD-------SVNLRRSRILR-----SATVPQGHVPVYVG 60
           MKQLIRRLSRVADS+QY LLRSD       S +  RS + R     +++VP+GHVPVYVG
Sbjct: 1   MKQLIRRLSRVADSAQYSLLRSDSQRPSRRSESFLRSSVTRRSKKQTSSVPEGHVPVYVG 60

Query: 61  EEMERFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLG 105
           +EMERFVVSA LLNHPVF  LL++SAQEYGY+QKGVL IPCHVL+FER++E+LRLG
Sbjct: 61  DEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIMESLRLG 116

[Close]

BLAST of Sed0025360 vs. TAIR 10
Match: AT1G56150.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 151.4 bits (381), Expect = 4.8e-37
Identity = 74/104 (71.15%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDSVNLRRSRILRSATVPQGHVPVYVGEEMERFVVSAHL 60
           MKQLIRRLSRVADS+QY LLRS+S   R  +    + VP+GHVPVYVG EMERFVV+A L
Sbjct: 1   MKQLIRRLSRVADSTQYSLLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAEL 60

Query: 61  LNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLG 105
           LNHPVF  LL +SAQEYGY+Q+GVL IPCHVL+FER++E+LRLG
Sbjct: 61  LNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESLRLG 104

[Close]

BLAST of Sed0025360 vs. TAIR 10
Match: AT1G16510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.4 bits (363), Expect = 5.9e-35
Identity = 79/135 (58.52%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDSVNLRRSR----------------ILRSATVPQGHVP 60
           MK LIRRLSRVADSS    +R  + + R  R                  R  TVP GHVP
Sbjct: 1   MKHLIRRLSRVADSSSEFSIRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNTVPAGHVP 60

Query: 61  VYVGEEMERFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLG 119
           VYVGEEMERFVVSA L+NHP+F  LL++SAQEYGY QKGVLHIPCHV++FERVVE LRLG
Sbjct: 61  VYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETLRLG 120

[Close]

BLAST of Sed0025360 vs. TAIR 10
Match: AT1G79130.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.1 bits (318), Expect = 9.8e-30
Identity = 72/129 (55.81%), Postives = 89/129 (68.99%), Query Frame = 0


Query: 1   MKQLIRRLSRVADSSQYCLLRSDSVNLRRS----------RILRSATVPQGHVPVYVGEE 60
           MK LIRRLSR+ADSS     RS  ++   S          R   +++VP GHVPV VGE+
Sbjct: 1   MKPLIRRLSRIADSSSCNRNRSGDIHHPTSTYSSSVFLVKRATVASSVPSGHVPVNVGED 60

Query: 61  MERFVVSAHLLNHPVFAELLDKSAQEYGYQQKGVLHIPCHVLLFERVVEALRLGDFDSRH 120
            ERFVVSA LLNHPVF  LL++SAQEYGY QKGVLHIPC+V +FE+VVE+LR G  D   
Sbjct: 61  KERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVESLRSGIADD-- 120

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BLAST of Sed0025360 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 5.4e-12
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 24  SVNLRRSRILRSATVPQGHVPVYV---GEEMERFVVSAHLLNHPVFAELLDKSAQEYGYQ 83
           S  L R + ++   VP+G + + V   GEE +RF+V     NHP+F +LL ++  EYG+ 
Sbjct: 10  SFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFD 69

Query: 84  QKGVLHIPCHVLLFERVVEALRLGD 106
           QKG + IPCHV  F R V+AL  G+
Sbjct: 70  QKGTITIPCHVEEF-RYVQALIDGE 93

The following BLAST results are available for this feature:

BLAST of Sed0025360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969445.1	7.7e-53	88.71	auxin-responsive protein SAUR71 [Cucurbita maxima]	[more]
XP_004139829.1	1.0e-52	88.80	auxin-responsive protein SAUR71 [Cucumis sativus] >KGN44276.1 hypothetical prote...	[more]
KAA0051102.1	1.3e-52	86.61	auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa] >TYK02692.1 auxi...	[more]
XP_022952057.1	1.3e-52	87.30	auxin-responsive protein SAUR71-like [Cucurbita moschata]	[more]
XP_038888278.1	1.7e-52	85.94	auxin-responsive protein SAUR71 [Benincasa hispida]	[more]

BLAST of Sed0025360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTV3	5.2e-36	68.10	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]
Q9SGU2	6.8e-36	71.15	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9SA49	8.3e-34	58.52	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
O64538	1.4e-28	55.81	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
Q9ZUZ3	7.6e-11	42.35	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]

BLAST of Sed0025360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZY4	3.7e-53	88.71	auxin-responsive protein SAUR71 OS=Cucurbita maxima OX=3661 GN=LOC111468444 PE=3...	[more]
A0A0A0K901	4.9e-53	88.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238400 PE=3 SV=1	[more]
A0A5A7U5G4	6.4e-53	86.61	Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1GJB9	6.4e-53	87.30	auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC1114548...	[more]
A0A1S3CSH0	8.3e-53	85.94	auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103504274 PE=...	[more]

BLAST of Sed0025360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12830.1	3.7e-37	68.10	SAUR-like auxin-responsive protein family	[more]
AT1G56150.1	4.8e-37	71.15	SAUR-like auxin-responsive protein family	[more]
AT1G16510.1	5.9e-35	58.52	SAUR-like auxin-responsive protein family	[more]
AT1G79130.1	9.8e-30	55.81	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	5.4e-12	42.35	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 7..101 e-value: 2.4E-29 score: 101.3
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 2..119
None	No IPR available	PANTHER	PTHR31374:SF165	AUXIN-RESPONSIVE PROTEIN SAUR72	coord: 2..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025360.1	Sed0025360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin