Sed0025359 (gene) Chayote v1

Overview


Name	Sed0025359
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Profilin
Location	LG06: 45612222 .. 45614656 (-)
RNA-Seq Expression	Sed0025359
Synteny	Sed0025359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTCTTCTTCATCTTCTTCATGAAAGCTGTGAGAAACAGAGAGCAATTTACAGAGCGAATTTTTTATTTGATTGTTTCAGAGCTTTCTCGAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACACCTCAAAGCTGCTGCTATAATCGGTAACGACGGTGCTGTTTGGGCTCAGAGCGCCGATTTCCCTAAGGTTTTTCCTCTTTTCTATGATCAAATCGTGTTGTTCTATGGCGCATTTCTGGTTTTGATCCGAAATAATTCTATGATTTTGTTGCATTTTTTCATCATTTTGTTGTTGTAGGCCTTTTAATCCTTTAGGTTCCGTGATTTTCTGCTTTGGATGCTGCAGAAAATCGATCGTTTGCATCGTTTGTTATGATCTTGAATCTGAGAGATATGAACTTTTAGTTCTTTCTAGATTTCTGTCGTTTTGTTTTTGTATCTTGCAATGAGCGTCTCAAAAACAACGGCTACGTGATTTTCTGATTTATATGTAATGAGCGACGTGTTTCTTACTCTTTTCTCTGATCAATTTGTGTTGTGCAATACTGCAATAGCGAATTTCTGGTTTTGATCCGAAATAATTTTATGATTTGTTGTTTTTTTTCATCGTTTCGTTGTTATAGGCGTTTCGATCGTTTCGGCTCCGTGATTTTCTGTTTTGGATGTAATGAGCGATGCATTTTGGCCGAAAATTAATCGCTTACATCGTTTGTTACGATCTTGTTGAAATCTGAGAGATATGAACTTTCAGTTTTTCAGATTTTGTAGATTTCTGTTGTTTTGTTTTTGTATCTTGCAATGAGCGTGTTCATAAGAACGATGGATTGATTGCACAGGAATTTGATCGAATCTGTTTCTGATACATTTAGTTGATTTCGGTAATGGAAACTTTGTTTTGGCAATTGTTCTTTTTGTTTCAGCATAATTTTTCAAATTTTTCGGTGCAATTCTGTTGGCTAATAGTGGTTATGGGGATGAAAAACTGTAGTTTAAGCCAGAAGAGATCTCTGCCATTACAAAGGATTTTGATGAGCCTGGTTCTCTTGCACCGACTGGTTTACACCTTGCAGGATCAAAGTACATGGTTATCCAAGGGGAACCTGGAGCTGTTATCCGTGGAAAGAAGGTACGTTTTGGTACCTGATATCTAGCCATGATTCTCTTTGAATGCTATGATCTTCCATAATCGGCTACTCTGATATTGATTCTTCATATACCTGACGTTGAATTGGTTGTTTAAAATTACTTACTAGACGTTATTGAATGAATAGCTTTAACCAATTTGATTTTTCTAGCTGAGACTGATCAAATCTAAGAATCTACATAGAATTTTGGAATCATTTCGTTCATTTTGTCTCTGTTATGCATGAAGCCATCTTGACTTTACCATCAAGGGATGTAATCACATTGAACTAACCTATGTTTCAAACATGAATGTTTGCACACTAAAAGGTATTTTTGTCCAAGTTTCATAGTTGCTTTTCTAGGATTTTTAAATTTTTCTTATTGAATTGTGTAACGACTTTCCAATCCAAATCAGTTCTAAATCCCTTCAATCACACCCATAATTGTAAAAAAAAAGTCTGGTTCATGGGTTCAATTTATGGTAATCATCTATATAGAAACTAATTTATTATGCATTCGTTTGTGTCGTGAGAATAGTTGAAAGGTTTAAGCTGCTCTAACACTCTTGGATTATAAAAAAGGTATCATACGATTTAATTCAAGTCTATGTAAGCTGGCCAAGACGTCTAATTGATATTAAAAACATGGGTTCTAATTTCCACCATACATGTTCTGTATTACTTTTCAACTTCAGGAATTTCCTAACTATAATCTATCTTGTAGGCTGTCAACTTTATGTTAACAAATCAAGATTAATTTATTGTGTGCTTATTTGTGTGTTTTATGATTCTTAATTATTTTAAACCATTTGACAGGGGACTTCTGGGATCACTGTAAAGAAAACAACCCAAGCACTCATTTTTGGTTTATATGATGAACCAATGACACCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTGTAATTCTTTTTTCATCTCAATATCATTTGCCTTCTATTCTAAACATAATTGGGGTTTTGAGCTGGTGTCCTGATTTTATAGCTGTGAACTGAGTGTTACAGAAAATAACAGTGTGAAGAAAACAAGAGTGTGGTGAATTTTGGTTGCTGATTTCTACCCATTTTATGTATTTTGGCTTTTATCTTTTTTGTGTATTCATGAATACACACTACTTCACAATATGAGTGTTTGAAAGTATTACACGTATGAGCTTGTACGTATTGCTGTTTTGCTTTTGATATAATTATTAAAATTTATGATCGTATGACTCCTAATTTTATAATATTT

mRNA sequence

CAGTCTTCTTCATCTTCTTCATGAAAGCTGTGAGAAACAGAGAGCAATTTACAGAGCGAATTTTTTATTTGATTGTTTCAGAGCTTTCTCGAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACACCTCAAAGCTGCTGCTATAATCGGTAACGACGGTGCTGTTTGGGCTCAGAGCGCCGATTTCCCTAAGTTTAAGCCAGAAGAGATCTCTGCCATTACAAAGGATTTTGATGAGCCTGGTTCTCTTGCACCGACTGGTTTACACCTTGCAGGATCAAAGTACATGGTTATCCAAGGGGAACCTGGAGCTGTTATCCGTGGAAAGAAGGGGACTTCTGGGATCACTGTAAAGAAAACAACCCAAGCACTCATTTTTGGTTTATATGATGAACCAATGACACCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTGTAATTCTTTTTTCATCTCAATATCATTTGCCTTCTATTCTAAACATAATTGGGGTTTTGAGCTGGTGTCCTGATTTTATAGCTGTGAACTGAGTGTTACAGAAAATAACAGTGTGAAGAAAACAAGAGTGTGGTGAATTTTGGTTGCTGATTTCTACCCATTTTATGTATTTTGGCTTTTATCTTTTTTGTGTATTCATGAATACACACTACTTCACAATATGAGTGTTTGAAAGTATTACACGTATGAGCTTGTACGTATTGCTGTTTTGCTTTTGATATAATTATTAAAATTTATGATCGTATGACTCCTAATTTTATAATATTT

Coding sequence (CDS)

ATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACACCTCAAAGCTGCTGCTATAATCGGTAACGACGGTGCTGTTTGGGCTCAGAGCGCCGATTTCCCTAAGTTTAAGCCAGAAGAGATCTCTGCCATTACAAAGGATTTTGATGAGCCTGGTTCTCTTGCACCGACTGGTTTACACCTTGCAGGATCAAAGTACATGGTTATCCAAGGGGAACCTGGAGCTGTTATCCGTGGAAAGAAGGGGACTTCTGGGATCACTGTAAAGAAAACAACCCAAGCACTCATTTTTGGTTTATATGATGAACCAATGACACCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTGTAA

Protein sequence

MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSLAPTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGL

Homology

[Close]

BLAST of Sed0025359 vs. NCBI nr
Match: XP_022153540.1 (profilin-like [Momordica charantia])

HSP 1 Score: 261.2 bits (666), Expect = 4.9e-66
Identity = 123/131 (93.89%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG VWAQSADFPKFKPEE++AI KDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGE GAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Sed0025359 vs. NCBI nr
Match: XP_022980486.1 (profilin-like [Cucurbita maxima])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 120/131 (91.60%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS++FP++KPEEISAI KDFDEPG+L
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSEFPQYKPEEISAIMKDFDEPGTL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLAGSKYMVIQGE GAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Sed0025359 vs. NCBI nr
Match: XP_008447563.1 (PREDICTED: profilin-like [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 122/131 (93.13%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIIGNDG+VWAQS+ FP++KPEEISAI KDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSGFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL GSKYMVIQGE GAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Sed0025359 vs. NCBI nr
Match: XP_022955703.1 (profilin-like [Cucurbita moschata] >KAG6581872.1 hypothetical protein SDJN03_21874, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018309.1 hypothetical protein SDJN02_20177 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 120/131 (91.60%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWA+S++FP++KPEEISAI KDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAKSSEFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLAGSKYMVIQGE GAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Sed0025359 vs. NCBI nr
Match: XP_004149180.1 (profilin [Cucumis sativus] >KGN58022.1 hypothetical protein Csa_009746 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 122/131 (93.13%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIIGNDG+VWAQS+ FP++KPEEISAI KDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSAFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL GSKYMVIQGE GAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Sed0025359 vs. ExPASy Swiss-Prot
Match: Q941H7 (Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 5.9e-62
Identity = 109/131 (83.21%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQ+Y+DD LM E DGQHL AAAIIG+DG+VWAQSA+FP+FKP EI+AI KDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCETDGQHLTAAAIIGHDGSVWAQSANFPQFKPAEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGEPGAVIRGKKG  GITVKKTTQALI G+YDEPMTPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPMTPGQCNMVVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYL+DQGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of Sed0025359 vs. ExPASy Swiss-Prot
Match: A4GFC2 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.9e-60
Identity = 104/131 (79.39%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQ+Y+DD LM +++GQHL AAA+IG+DG+VWAQSA FP+FKPEE++AI KDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGQHLTAAAVIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGEPGAVIRGKKG  GITVKKT QALIFG+YDEP+TPGQCN+IVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYL++QGL
Sbjct: 121 RLGDYLLEQGL 131

[Close]

BLAST of Sed0025359 vs. ExPASy Swiss-Prot
Match: Q9XF38 (Profilin OS=Pyrus communis OX=23211 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.5e-60
Identity = 104/131 (79.39%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQ+Y+DD LM ++DG HL AAAI+G+DG+VWAQS+ FPKFKPEEI+AI KDFDEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIDGHHLTAAAILGHDGSVWAQSSTFPKFKPEEITAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGE GAVIRGKKG+ G+TVKKT+QAL+FG+Y+EP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTSQALVFGIYEEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYLIDQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0025359 vs. ExPASy Swiss-Prot
Match: A4GFC4 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 4.2e-60
Identity = 104/130 (80.00%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQ+Y+DD LM +++GQHL AAAIIG+DG+VWAQSA FP+FKPEE++AI KDFDEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGQHLTAAAIIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGEPGAVIRGKKG  GITVKKT QALIFG+YDEP+TPGQCN+IVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 KLGDYLIDQG 131
           +LGDYL++QG
Sbjct: 121 RLGDYLLEQG 130

[Close]

BLAST of Sed0025359 vs. ExPASy Swiss-Prot
Match: Q9XF40 (Profilin-1 OS=Malus domestica OX=3750 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.6e-59
Identity = 103/131 (78.63%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQ+Y+DD+LM ++DG HL AAAI+G+DG+VWA S+ FPKFKPEEI+AI KDFDEPGSL
Sbjct: 1   MSWQAYVDDRLMCDIDGHHLTAAAILGHDGSVWAHSSTFPKFKPEEITAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGE GAVIRGKKG+ G+TVKKT QAL+FG+Y+EP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTGQALVFGIYEEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYLIDQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0025359 vs. ExPASy TrEMBL
Match: A0A6J1DH42 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021021 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66
Identity = 123/131 (93.89%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG VWAQSADFPKFKPEE++AI KDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL G+KYMVIQGE GAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Sed0025359 vs. ExPASy TrEMBL
Match: A0A6J1ITQ4 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111479863 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.9e-65
Identity = 120/131 (91.60%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWAQS++FP++KPEEISAI KDFDEPG+L
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSEFPQYKPEEISAIMKDFDEPGTL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLAGSKYMVIQGE GAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Sed0025359 vs. ExPASy TrEMBL
Match: A0A1S3BHQ2 (Profilin OS=Cucumis melo OX=3656 GN=LOC103489979 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.9e-65
Identity = 122/131 (93.13%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIIGNDG+VWAQS+ FP++KPEEISAI KDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSGFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL GSKYMVIQGE GAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Sed0025359 vs. ExPASy TrEMBL
Match: A0A0A0LBL9 (Profilin OS=Cucumis sativus OX=3659 GN=Csa_3G435030 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.7e-65
Identity = 122/131 (93.13%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIIGNDG+VWAQS+ FP++KPEEISAI KDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSAFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL GSKYMVIQGE GAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQGL
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Sed0025359 vs. ExPASy TrEMBL
Match: A0A6J1GUQ5 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111457625 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.7e-65
Identity = 120/131 (91.60%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG+VWA+S++FP++KPEEISAI KDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAKSSEFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLAGSKYMVIQGE GAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGL 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Sed0025359 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 211.8 bits (538), Expect = 3.2e-55
Identity = 97/134 (72.39%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEV---DGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEP 60
           MSWQ+Y+D+ LM +V    G HL AAAIIG+DG+VWAQSA+FP+FKP+EI+ I KDFDEP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLAPTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNM 120
           G LAPTG+ LAG KYMVIQGEP AVIRGKKG  GIT+KKT Q+++FGLY+EP+TPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 IVEKLGDYLIDQGL 132
           +VE+LGDYLI+QGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Sed0025359 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 208.4 bits (529), Expect = 3.5e-54
Identity = 94/134 (70.15%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEV---DGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEP 60
           MSWQ+Y+D+ LM +V    G HL AAAI+G+DG+VWAQSA+FP+FK +E S I KDFDEP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLAPTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNM 120
           G LAPTGL +AG+KYMVIQGEPGAVIRGKKG  GIT+KKT Q+ +FG+Y+EP+TPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 IVEKLGDYLIDQGL 132
           +VE+LGDYL++QGL
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of Sed0025359 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 208.0 bits (528), Expect = 4.6e-54
Identity = 94/131 (71.76%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSY+DD LM +V+G HL AAAI+G DG+VWAQSA FP+ KP+EI  I KDF+EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGL L G KYMVIQGE GAVIRGKKG  G+T+KKT QAL+FG YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYLI+  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of Sed0025359 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-53
Identity = 93/131 (70.99%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQSY+DD LM EV+G HL  AAI G DG+VWAQS+ FP+ KP EI+ I KDF+E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGL L G KYMV+QGE GAVIRGKKG  G+T+KKTTQAL+FG+YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 KLGDYLIDQGL 132
           +LGDYLI+ GL
Sbjct: 121 RLGDYLIESGL 131

[Close]

BLAST of Sed0025359 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 203.8 bits (517), Expect = 8.7e-53
Identity = 92/131 (70.23%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGAVWAQSADFPKFKPEEISAITKDFDEPGSL 60
           MSWQ+Y+DD LM +V G  L AAAI+G DG+VWAQS +FP+ KPEEI  I  DF  PG+L
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLHLAGSKYMVIQGEPGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120
           APTGL L G+KYMVIQGEP AVIRGKKG  G+T+KKTT AL+FG+YDEPMTPGQCNM+VE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 KLGDYLIDQGL 132
            LG+YLI+ GL
Sbjct: 158 NLGEYLIESGL 168

The following BLAST results are available for this feature:

BLAST of Sed0025359 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153540.1	4.9e-66	93.89	profilin-like [Momordica charantia]	[more]
XP_022980486.1	1.2e-64	91.60	profilin-like [Cucurbita maxima]	[more]
XP_008447563.1	1.2e-64	93.13	PREDICTED: profilin-like [Cucumis melo]	[more]
XP_022955703.1	1.6e-64	91.60	profilin-like [Cucurbita moschata] >KAG6581872.1 hypothetical protein SDJN03_218...	[more]
XP_004149180.1	1.6e-64	93.13	profilin [Cucumis sativus] >KGN58022.1 hypothetical protein Csa_009746 [Cucumis ...	[more]

BLAST of Sed0025359 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941H7	5.9e-62	83.21	Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1	[more]
A4GFC2	1.9e-60	79.39	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
Q9XF38	2.5e-60	79.39	Profilin OS=Pyrus communis OX=23211 PE=1 SV=1	[more]
A4GFC4	4.2e-60	80.00	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
Q9XF40	1.6e-59	78.63	Profilin-1 OS=Malus domestica OX=3750 PE=1 SV=1	[more]

BLAST of Sed0025359 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH42	2.4e-66	93.89	Profilin OS=Momordica charantia OX=3673 GN=LOC111021021 PE=3 SV=1	[more]
A0A6J1ITQ4	5.9e-65	91.60	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111479863 PE=3 SV=1	[more]
A0A1S3BHQ2	5.9e-65	93.13	Profilin OS=Cucumis melo OX=3656 GN=LOC103489979 PE=3 SV=1	[more]
A0A0A0LBL9	7.7e-65	93.13	Profilin OS=Cucumis sativus OX=3659 GN=Csa_3G435030 PE=3 SV=1	[more]
A0A6J1GUQ5	7.7e-65	91.60	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111457625 PE=3 SV=1	[more]

BLAST of Sed0025359 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19770.1	3.2e-55	72.39	profilin 5	[more]
AT4G29340.1	3.5e-54	70.15	profilin 4	[more]
AT2G19760.1	4.6e-54	71.76	profilin 1	[more]
AT4G29350.1	1.0e-53	70.99	profilin 2	[more]
AT5G56600.1	8.7e-53	70.23	profilin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 64..78 score: 67.33 coord: 40..60 score: 54.88 coord: 113..130 score: 68.19 coord: 21..30 score: 61.5 coord: 3..12 score: 59.75 coord: 100..113 score: 62.86
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 117..130 score: 77.01 coord: 1..14 score: 63.77 coord: 104..117 score: 85.97 coord: 84..99 score: 73.52 coord: 52..66 score: 82.79 coord: 27..40 score: 73.51 coord: 71..80 score: 96.73
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 5.2E-61 score: 218.7
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..130 e-value: 1.3E-42 score: 145.0
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..131
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..130 e-value: 5.97074E-55 score: 166.347
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..131 e-value: 9.1E-55 score: 186.3
None	No IPR available	PANTHER	PTHR11604:SF51	PROFILIN-A	coord: 1..131
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025359.1	Sed0025359.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding