Homology
BLAST of Sed0025332 vs. NCBI nr
Match:
XP_038879208.1 (pentatricopeptide repeat-containing protein At5g01110 [Benincasa hispida] >XP_038879209.1 pentatricopeptide repeat-containing protein At5g01110 [Benincasa hispida])
HSP 1 Score: 968.0 bits (2501), Expect = 4.0e-278
Identity = 518/756 (68.52%), Postives = 572/756 (75.66%), Query Frame = 0
Query: 5 VSWSCPLMAAYRLPHPEPTFR------TFRT-------------RFHSNHTLQSLQTYYG 64
+S SCP MA +RLP P+ TFR TF + +F SN L+SLQT+
Sbjct: 1 MSLSCPQMAVHRLPLPKSTFRSGVLASTFASATPSVTHTIYSLPKFRSNTPLRSLQTHIT 60
Query: 65 APAPPNRHPPV----SNSNSFLVENILFNLKLNNV-------------ILVEVLFRCRDN 124
P H PV S S+SFLV+ ILFNLK NNV +L+EVL RCR+N
Sbjct: 61 PELP--HHDPVCSSFSPSDSFLVDKILFNLKQNNVSYLSNSLFRLNPSLLLEVLCRCREN 120
Query: 125 LPLGLKFIGLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVV 184
L LGLKFI L+SSNCPNFKHSSLSLSAMVHFL+R RR+S+AQACILRMVRKSGVSRVEVV
Sbjct: 121 LHLGLKFIDLVSSNCPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVV 180
Query: 185 ESLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLV 244
ESL+STS +F SI VSDLLVRTYVQARK REG AFRILRSKGV VSINACNSLLGGLV
Sbjct: 181 ESLISTSVNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLV 240
Query: 245 KIGWVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTV 304
KIGWVDLAWE+YGEVVRGG+ELNVYTLNIMVNALCKD+KIE+V LFLSDME+K VFPD V
Sbjct: 241 KIGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKIENVNLFLSDMEEKGVFPDIV 300
Query: 305 TYNTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDM 364
TYNTLI+AYCREGLVEEAF+LLNSI S GMEPGLLTYN++INGLCK+G Y RAK+VLN+M
Sbjct: 301 TYNTLINAYCREGLVEEAFQLLNSISSKGMEPGLLTYNAIINGLCKIGKYERAKDVLNEM 360
Query: 365 LQLGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHL 424
+QLGLRPDAATYN LLVE CRRD+I E +EIF +MSR GVLPDLVSFS L+G+LA+NGHL
Sbjct: 361 VQLGLRPDAATYNTLLVEICRRDNILEAQEIFDKMSRHGVLPDLVSFSSLLGVLARNGHL 420
Query: 425 DRALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTI 484
D+A M+FR+MK GLV DN+IYTILIDGFCRNGAISDALKM+DEMLA GC MDVVAYNTI
Sbjct: 421 DQAFMHFREMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCFMDVVAYNTI 480
Query: 485 LNGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANL 544
LNGLCKK+M DADMLFNEMVE GVFPDFYTFTTLIHGYCKDGNMD+A+N GTMV NL
Sbjct: 481 LNGLCKKKMFADADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMVRTNL 540
Query: 545 KPDIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALY 604
KPDIVTYNTLIDGFCK DDMI KDILPNHISYG ++NGFC+S HL EA +
Sbjct: 541 KPDIVTYNTLIDGFCKVGGMERAKELWDDMIRKDILPNHISYGIVINGFCSSGHLSEAWH 600
Query: 605 LCDQMV------------------------------------------------------ 645
LCDQMV
Sbjct: 601 LCDQMVERGIKPNLVTCNTLIKGYCRSGDMPKAYEYLSQMISNGIIPDSISYNTLIDGYL 660
BLAST of Sed0025332 vs. NCBI nr
Match:
XP_022933790.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita moschata])
HSP 1 Score: 953.4 bits (2463), Expect = 1.0e-273
Identity = 508/755 (67.28%), Postives = 566/755 (74.97%), Query Frame = 0
Query: 5 VSWSCPLMAAYRLPHPEPTFRT------------------FRTRFHSNHTLQSLQTYYGA 64
+S SCP MAA+RLP P+PTFRT FH ++L + +
Sbjct: 1 MSSSCPPMAAHRLPLPKPTFRTRIIASTVTYATPLLRSNSISFTFHLFYSLPKFHSIHDE 60
Query: 65 PAPPNRHPPVSN----SNSFLVENILFNLKLNNV-------------ILVEVLFRCRDNL 124
A + H PVS+ SNSFLVE ILF+LK NNV LVEVL+ CR+NL
Sbjct: 61 AAGSSNHGPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 120
Query: 125 PLGLKFIGLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVE 184
LGLKFI L+SS+CPN KHSS+SLSAMVHFL+R RR+S+AQACILRMVRKSGVSRVEVV+
Sbjct: 121 HLGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVQ 180
Query: 185 SLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVK 244
SLVST G+F SI VSDLLVRTYVQARK REG AFRILRSKGV VSINACNSLLGGLVK
Sbjct: 181 SLVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
Query: 245 IGWVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVT 304
IGWVDLAWE++GEVVRGG ELNVYTLNIMVNALCKD +I +V LFLSDMEKK VFPD VT
Sbjct: 241 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 300
Query: 305 YNTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDML 364
YNTLISAYCREGLVEEAF+LLNSI S GMEPGLLTYN++INGLCK+G Y+RAK+VLN M
Sbjct: 301 YNTLISAYCREGLVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIGKYNRAKDVLNKMS 360
Query: 365 QLGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLD 424
QLGL+PDAATYN LLVE CRRD+ISE EEIF EMSR GVLPDL+SFS LI +LA+NG LD
Sbjct: 361 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGDLD 420
Query: 425 RALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTIL 484
AL YFR+MK GLV DN+IYTILIDGFCRNGAISDALKM+DEMLA GCV+DVVAYNTIL
Sbjct: 421 LALTYFRNMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTIL 480
Query: 485 NGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLK 544
NGLCKK+MLVDADMLFNEMVE GVFPDFYTFTTLIHGYCKDGNMDRA+N G MV NLK
Sbjct: 481 NGLCKKKMLVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGRMVRTNLK 540
Query: 545 PDIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYL 604
PDIVTYNTLIDGFCK DDMI KDI+PNH+SYGT++NGFC+S +L EAL+L
Sbjct: 541 PDIVTYNTLIDGFCKVGDMKKAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHL 600
Query: 605 CDQMV------------------------------------------------------- 645
CDQMV
Sbjct: 601 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 660
BLAST of Sed0025332 vs. NCBI nr
Match:
KAG6588214.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 950.7 bits (2456), Expect = 6.7e-273
Identity = 505/755 (66.89%), Postives = 566/755 (74.97%), Query Frame = 0
Query: 5 VSWSCPLMAAYRLPHPEPTFRT------------------FRTRFHSNHTLQSLQTYYGA 64
+S SCPLMAA+RLP P+PTFRT FH ++L + +
Sbjct: 1 MSSSCPLMAAHRLPLPKPTFRTRILASTFSYATPLLRANSISFTFHLFYSLPKFHSIHDE 60
Query: 65 PAPPNRHPPVSN----SNSFLVENILFNLKLNNV-------------ILVEVLFRCRDNL 124
A + H PVS+ SNSFLVE ILF+LK NNV LVEVL+ CR+NL
Sbjct: 61 AAGSSNHGPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 120
Query: 125 PLGLKFIGLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVE 184
LGLKFI L+SS+CPN KHSS+SLSAMVHFL+R RR+S+AQACILRMVRKSGVSRVEVV+
Sbjct: 121 HLGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVQ 180
Query: 185 SLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVK 244
SLVST G+F SI VSDLLVRTYVQARK REG AFRILRSKGV VSINACNSLLGGLVK
Sbjct: 181 SLVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
Query: 245 IGWVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVT 304
IGWVDLAWE++GEVVRGG ELNVYTLNIMVNALCKD +I +V LFLSDMEKK VFPD VT
Sbjct: 241 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 300
Query: 305 YNTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDML 364
YNTLIS YCREGLVEEAF+LLNSI S GMEPGLLTYN++INGLCK+G Y+RAK+VLN M
Sbjct: 301 YNTLISTYCREGLVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIGKYNRAKDVLNKMS 360
Query: 365 QLGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLD 424
QLGL+PDAATYN LLVE CRRD+ISE EEIF EMSR GVLPDL+SFS LI +LA+NG LD
Sbjct: 361 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGDLD 420
Query: 425 RALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTIL 484
AL YFR+MK GLV DN+IYTILIDGFCRNGAISDALKM+DEMLA GCV+DVVAYNTIL
Sbjct: 421 LALTYFRNMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTIL 480
Query: 485 NGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLK 544
NGLCKK+MLVDADMLFNEMVE G+FPDFYTFTTLIHGYCKDGNMDRA+N TMV NLK
Sbjct: 481 NGLCKKKMLVDADMLFNEMVERGMFPDFYTFTTLIHGYCKDGNMDRALNLFRTMVRTNLK 540
Query: 545 PDIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYL 604
PDIVTYNTLIDGFCK DDMI KDI+PNH++YGT++NGFC+S +L+EAL+L
Sbjct: 541 PDIVTYNTLIDGFCKVGDMKKAKDLWDDMIRKDIVPNHVTYGTVINGFCSSGYLFEALHL 600
Query: 605 CDQMV------------------------------------------------------- 645
CDQMV
Sbjct: 601 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 660
BLAST of Sed0025332 vs. NCBI nr
Match:
XP_022973817.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima] >XP_022973822.1 pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima])
HSP 1 Score: 949.9 bits (2454), Expect = 1.1e-272
Identity = 505/754 (66.98%), Postives = 564/754 (74.80%), Query Frame = 0
Query: 6 SWSCPLMAAYRLPHPEPTFRT------------------FRTRFHSNHTLQSLQTYYGAP 65
S SCP MAA+RLP P+PTFRT FH ++L + +
Sbjct: 3 SSSCPPMAAHRLPLPKPTFRTRILASTFTYATPLLRANSISFTFHLIYSLPKFHSIHDEA 62
Query: 66 APPNRHPPVSN----SNSFLVENILFNLKLNNV-------------ILVEVLFRCRDNLP 125
+ + H PVS+ SNSFLVE ILF+LK NNV LVEVL+ CR+NL
Sbjct: 63 SGSSNHDPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENLH 122
Query: 126 LGLKFIGLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVES 185
LGLKFI L+SS+CPN KHSS+SLSAMVHFL+R RR+S+AQACILRMVRKSGVSRVEVVES
Sbjct: 123 LGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVES 182
Query: 186 LVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKI 245
+VST G+F SI VSDLLVRTYVQARK REG AFRIL+SKGV VSINACNSLLGGLVKI
Sbjct: 183 IVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILKSKGVSVSINACNSLLGGLVKI 242
Query: 246 GWVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTY 305
GWVDLAWE++GEVVRGG ELNVYTLNIMVNALCKD +I +V LFLSDMEKK VFPD VTY
Sbjct: 243 GWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVTY 302
Query: 306 NTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQ 365
NTLISAYCREG VEEAF+LLNSI S GMEPGLLTYN++INGLCK+ Y+RAK+VLN M Q
Sbjct: 303 NTLISAYCREGFVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIRKYNRAKDVLNQMSQ 362
Query: 366 LGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDR 425
LGL+PDAATYN LLVE CRRD+ISE EEIF EMSR GVLPDL+SFS LI +LA+NG+LD
Sbjct: 363 LGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGNLDL 422
Query: 426 ALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILN 485
AL YFRDMK GLV DN+IYTILIDGFCRNGAISDALKM+DEMLA GCV+DVVAYNTILN
Sbjct: 423 ALTYFRDMKNIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTILN 482
Query: 486 GLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKP 545
GLCKK+MLVDADMLFNEMVE GVFPDFYTFTTLIHGYCKDGNMDRA+N GTMV NLKP
Sbjct: 483 GLCKKKMLVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGTMVRTNLKP 542
Query: 546 DIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYLC 605
DIVTYNTLIDGFCK DDMI KDI+PNH+SYGT++NGFC+S +L EAL+LC
Sbjct: 543 DIVTYNTLIDGFCKVGDMKRAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHLC 602
Query: 606 DQMV-------------------------------------------------------- 645
DQMV
Sbjct: 603 DQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLKD 662
BLAST of Sed0025332 vs. NCBI nr
Match:
XP_023530884.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 947.6 bits (2448), Expect = 5.6e-272
Identity = 503/755 (66.62%), Postives = 564/755 (74.70%), Query Frame = 0
Query: 5 VSWSCPLMAAYRLPHPEPTFRT------------------FRTRFHSNHTLQSLQTYYGA 64
+S SCP MAA+RLP P+PTFRT FH ++L + +
Sbjct: 1 MSSSCPPMAAHRLPLPKPTFRTRILAPTFTYATPLLRANFISFTFHLFYSLPKFHSIHDE 60
Query: 65 PAPPNRHPPVSN----SNSFLVENILFNLKLNNV-------------ILVEVLFRCRDNL 124
A + H PVS+ SNSFLVE ILF+LK NNV LVEVL+ CR+NL
Sbjct: 61 AAGSSNHDPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 120
Query: 125 PLGLKFIGLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVE 184
LGLKFI L+SS+CPN KHSS+SLSAMVHFL+R RR+S+AQ CILRMVRKSGVSRVEVVE
Sbjct: 121 HLGLKFIDLISSSCPNLKHSSISLSAMVHFLVRGRRLSEAQVCILRMVRKSGVSRVEVVE 180
Query: 185 SLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVK 244
S+VST G+F SI VSDLLVRTYVQARK REG AFRILRSKGV VSINACNSLLGGLVK
Sbjct: 181 SIVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
Query: 245 IGWVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVT 304
IGWVDLAWE++GEVVRGG ELNVYTLNIMVNALCKD +I +V LFLSDMEKK VFPD VT
Sbjct: 241 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 300
Query: 305 YNTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDML 364
YNTLISAYCREGLVEEAF+LLNSI S GMEPGLLTYN++INGLCK+G Y+RAK+VLN M
Sbjct: 301 YNTLISAYCREGLVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIGKYNRAKDVLNQMS 360
Query: 365 QLGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLD 424
QLGL+PDAATYN LLVE CRRD+ISE EEIF EMSR GVLPDL+SFS LI +LA+NG LD
Sbjct: 361 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGDLD 420
Query: 425 RALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTIL 484
AL YFR+MK GLV DN+IYTILIDGFCRNGAISDALKM+DEMLA GC++DVVAYNTIL
Sbjct: 421 LALTYFRNMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCLVDVVAYNTIL 480
Query: 485 NGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLK 544
NGLCKK+MLVDADMLFNEM+E GVFPDFYTFTTLIHGYCKDGNMDRA+N G MV NLK
Sbjct: 481 NGLCKKKMLVDADMLFNEMIERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGRMVRTNLK 540
Query: 545 PDIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYL 604
PDIVTYNTLIDGFCK DDMI KDI+PNH+SYGT++NGFC+S +L EAL+L
Sbjct: 541 PDIVTYNTLIDGFCKVGDMKKAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHL 600
Query: 605 CDQMV------------------------------------------------------- 645
CDQMV
Sbjct: 601 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 660
BLAST of Sed0025332 vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 652.1 bits (1681), Expect = 6.4e-186
Identity = 343/682 (50.29%), Postives = 444/682 (65.10%), Query Frame = 0
Query: 57 SNSNSFLVENILFNLK------------LNNVILVEVLFRCRDNLPLGLKFIGLLSSNCP 116
S S+SFLVE I F+LK LN + +VEVL+RCR++L LG +F+ L + P
Sbjct: 48 SVSDSFLVEKICFSLKQGNNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFP 107
Query: 117 NFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVESLVSTSGDFRSIDFV 176
NFKH+SLSLSAM+H L+R R+SDAQ+C+LRM+R+SGVSR+E+V SL ST + S D V
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 177 SDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKIGWVDLAWEMYGEVV 236
DLL+RTYVQARK RE AF +LRSKG VSI+ACN+L+G LV+IGWV+LAW +Y E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 237 RGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISAYCREGLVE 296
R GV +NVYTLNIMVNALCKD K+E V FLS +++K V+PD VTYNTLISAY +GL+E
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 297 EAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPDAATYNPLL 356
EAF+L+N++ G PG+ TYN++INGLCK G Y RAK V +ML+ GL PD+ TY LL
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 357 VETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFRDMKRFGLV 416
+E C++ D+ E E++F +M R V+PDLV FS ++ + ++G+LD+ALMYF +K GL+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 417 LDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKRMLVDADML 476
DN+IYTILI G+CR G IS A+ +++EML GC MDVV YNTIL+GLCK++ML +AD L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 477 FNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYNTLIDGFCK 536
FNEM E +FPD YT T LI G+CK GN+ AM M ++ D+VTYNTL+DGF K
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 537 -----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYLCDQMV---------- 596
DM+SK+ILP ISY L+N C+ HL EA + D+M+
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 597 ------------------------------------------------------------ 645
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
BLAST of Sed0025332 vs. ExPASy Swiss-Prot
Match:
Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 287.7 bits (735), Expect = 3.2e-76
Identity = 171/586 (29.18%), Postives = 308/586 (52.56%), Query Frame = 0
Query: 69 FNLKLNNVILVEVLFRCRDNLPLGLKFIGLLSSNCPNFKHSSL-SLSAMVHFLLRCRRVS 128
+ K L+ VL + + + L L F S + S+L SL ++H + + +
Sbjct: 81 YECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR----RDSNLESLCIVIHLAVASKDLK 140
Query: 129 DAQACILRMVRKSGV----SRVEVVESLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCG 188
AQ+ I + + S V+ + LV T D+ S V D+ + V RE
Sbjct: 141 VAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARR 200
Query: 189 AFRILRSKGVCVSINACNSLLGGLVKIGW-VDLAWEMYGEVVRGGVELNVYTLNIMVNAL 248
F + + G+ +S+++CN L L K + A ++ E GV NV + NI+++ +
Sbjct: 201 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 260
Query: 249 CKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISAYCREGLVEEAFKLLNSIYSMGMEPGL 308
C+ +I+ L ME K PD ++Y+T+++ YCR G +++ +KL+ + G++P
Sbjct: 261 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 320
Query: 309 LTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPDAATYNPLLVETCRRDDISEGEEIFHE 368
Y S+I LC++ + A+ ++M++ G+ PD Y L+ C+R DI + F+E
Sbjct: 321 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 380
Query: 369 MSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFRDMKRFGLVLDNIIYTILIDGFCRNGA 428
M R + PD+++++ +I + G + A F +M GL D++ +T LI+G+C+ G
Sbjct: 381 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 440
Query: 429 ISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTT 488
+ DA ++ + M+ GC +VV Y T+++GLCK+ L A+ L +EM ++G+ P+ +T+ +
Sbjct: 441 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 500
Query: 489 LIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYNTLIDGFCKD-----------DMISKD 548
+++G CK GN++ A+ +G +A L D VTY TL+D +CK +M+ K
Sbjct: 501 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 560
Query: 549 ILPNHISYGTLMNGFCNSCHLYEALYLCDQMVEQRRLQVDVITYNVILKGFCAKGRMQEA 608
+ P +++ LMNGFC L + L + M+ + + + T+N ++K +C + ++ A
Sbjct: 561 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYCIRNNLKAA 620
Query: 609 EQVLKKMIENGINPDKATYSSLINGHVSQENMKDAFRFHDEMLQRG 638
+ K M G+ PD TY +L+ GH NMK+A+ EM +G
Sbjct: 621 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
BLAST of Sed0025332 vs. ExPASy Swiss-Prot
Match:
Q9ZQF1 (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g15630 PE=3 SV=1)
HSP 1 Score: 280.4 bits (716), Expect = 5.1e-74
Identity = 153/460 (33.26%), Postives = 249/460 (54.13%), Query Frame = 0
Query: 166 DLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKIGWVDLAWEMYGEVVR 225
DLLVR Q R E F +++ KG CN +L L ++ ++ AW Y ++ R
Sbjct: 159 DLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYR 218
Query: 226 GGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISAYCREGLVEE 285
++ NVYT NIM+N LCK+ K++ K FL ME + P VTYNTL+ + G +E
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG 278
Query: 286 AFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPDAATYNPLLV 345
A +++ + S G +P + TYN +++ +C G RA VL +M ++GL PD+ +YN L+
Sbjct: 279 ARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIR 338
Query: 346 ETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFRDMKRFGLVL 405
D+ EM ++G++P +++ LI L ++ A + R+++ G+VL
Sbjct: 339 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 398
Query: 406 DNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKRMLVDADMLF 465
D++ Y ILI+G+C++G A + DEM+ G Y +++ LC+K +AD LF
Sbjct: 399 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 458
Query: 466 NEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYNTLIDGFCKD 525
++V G+ PD TL+ G+C GNMDRA + L M ++ PD VTYN L+ G C +
Sbjct: 459 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 518
Query: 526 -----------DMISKDILPNHISYGTLMNGFCNSCHLYEALYLCDQMVEQRRLQVDVIT 585
+M + I P+HISY TL++G+ A + D+M+ ++T
Sbjct: 519 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML-SLGFNPTLLT 578
Query: 586 YNVILKGFCAKGRMQEAEQVLKKMIENGINPDKATYSSLI 615
YN +LKG + AE++L++M GI P+ +++ S+I
Sbjct: 579 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
BLAST of Sed0025332 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 275.8 bits (704), Expect = 1.3e-72
Identity = 160/555 (28.83%), Postives = 275/555 (49.55%), Query Frame = 0
Query: 147 VVESLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGG 206
V +SL T S V DL+V++Y + + + ++ G + + N++L
Sbjct: 119 VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA 178
Query: 207 LVKIGW-VDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFP 266
++ + A ++ E++ V NV+T NI++ C I+ ME K P
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 267 DTVTYNTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVL 326
+ VTYNTLI YC+ +++ FKLL S+ G+EP L++YN +INGLC+ G VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 327 NDMLQLGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKN 386
+M + G D TYN L+ C+ + + + EM R G+ P +++++ LI + K
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 387 GHLDRALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAY 446
G+++RA+ + M+ GL + YT L+DGF + G +++A ++ EM +G VV Y
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 447 NTILNGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVS 506
N ++NG C + DA + +M E G+ PD +++T++ G+C+ ++D A+ MV
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 507 ANLKPDIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYE 566
+KPD +TY++LI GFC+ ++M+ + P+ +Y L+N +C L +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 567 ALYLCDQMVEQRRLQVDVITYNV------------------------------------- 626
AL L ++MVE+ L DV+TY+V
Sbjct: 539 ALQLHNEMVEKGVLP-DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 598
Query: 627 -------------ILKGFCAKGRMQEAEQVLKKMIENGINPDKATYSSLINGHVSQENMK 640
++KGFC KG M EA+QV + M+ PD Y+ +I+GH +++
Sbjct: 599 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 658
BLAST of Sed0025332 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 274.6 bits (701), Expect = 2.8e-72
Identity = 148/452 (32.74%), Postives = 244/452 (53.98%), Query Frame = 0
Query: 201 NSLLGGLVKIGWVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEK 260
N L + + DL + G+E ++YT+ IM+N C+ KK+ L K
Sbjct: 74 NRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK 133
Query: 261 KRVFPDTVTYNTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSR 320
PDT+T++TL++ +C EG V EA L++ + M P L+T +++INGLC G S
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 321 AKNVLNDMLQLGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIG 380
A +++ M++ G +PD TY P+L C+ + + ++F +M R + +V +S +I
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 381 MLAKNGHLDRALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVM 440
L K+G D AL F +M+ G+ D + Y+ LI G C +G D KM EM+ +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 441 DVVAYNTILNGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFL 500
DVV ++ +++ K+ L++A L+NEM+ G+ PD T+ +LI G+CK+ + A
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 501 GTMVSANLKPDIVTYNTLIDGFCK----DD-------MISKDILPNHISYGTLMNGFCNS 560
MVS +PDIVTY+ LI+ +CK DD + SK ++PN I+Y TL+ GFC S
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 561 CHLYEALYLCDQMVEQRRLQVDVITYNVILKGFCAKGRMQEAEQVLKKMIENGINPDKAT 620
L A L +MV R + V+TY ++L G C G + +A ++ +KM ++ +
Sbjct: 434 GKLNAAKELFQEMV-SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 493
Query: 621 YSSLINGHVSQENMKDAFRFHDEMLQRGLVPD 642
Y+ +I+G + + DA+ + +G+ PD
Sbjct: 494 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
BLAST of Sed0025332 vs. ExPASy TrEMBL
Match:
A0A6J1F5T7 (pentatricopeptide repeat-containing protein At5g01110 OS=Cucurbita moschata OX=3662 GN=LOC111441098 PE=4 SV=1)
HSP 1 Score: 953.4 bits (2463), Expect = 5.0e-274
Identity = 508/755 (67.28%), Postives = 566/755 (74.97%), Query Frame = 0
Query: 5 VSWSCPLMAAYRLPHPEPTFRT------------------FRTRFHSNHTLQSLQTYYGA 64
+S SCP MAA+RLP P+PTFRT FH ++L + +
Sbjct: 1 MSSSCPPMAAHRLPLPKPTFRTRIIASTVTYATPLLRSNSISFTFHLFYSLPKFHSIHDE 60
Query: 65 PAPPNRHPPVSN----SNSFLVENILFNLKLNNV-------------ILVEVLFRCRDNL 124
A + H PVS+ SNSFLVE ILF+LK NNV LVEVL+ CR+NL
Sbjct: 61 AAGSSNHGPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 120
Query: 125 PLGLKFIGLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVE 184
LGLKFI L+SS+CPN KHSS+SLSAMVHFL+R RR+S+AQACILRMVRKSGVSRVEVV+
Sbjct: 121 HLGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVQ 180
Query: 185 SLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVK 244
SLVST G+F SI VSDLLVRTYVQARK REG AFRILRSKGV VSINACNSLLGGLVK
Sbjct: 181 SLVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
Query: 245 IGWVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVT 304
IGWVDLAWE++GEVVRGG ELNVYTLNIMVNALCKD +I +V LFLSDMEKK VFPD VT
Sbjct: 241 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 300
Query: 305 YNTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDML 364
YNTLISAYCREGLVEEAF+LLNSI S GMEPGLLTYN++INGLCK+G Y+RAK+VLN M
Sbjct: 301 YNTLISAYCREGLVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIGKYNRAKDVLNKMS 360
Query: 365 QLGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLD 424
QLGL+PDAATYN LLVE CRRD+ISE EEIF EMSR GVLPDL+SFS LI +LA+NG LD
Sbjct: 361 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGDLD 420
Query: 425 RALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTIL 484
AL YFR+MK GLV DN+IYTILIDGFCRNGAISDALKM+DEMLA GCV+DVVAYNTIL
Sbjct: 421 LALTYFRNMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTIL 480
Query: 485 NGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLK 544
NGLCKK+MLVDADMLFNEMVE GVFPDFYTFTTLIHGYCKDGNMDRA+N G MV NLK
Sbjct: 481 NGLCKKKMLVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGRMVRTNLK 540
Query: 545 PDIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYL 604
PDIVTYNTLIDGFCK DDMI KDI+PNH+SYGT++NGFC+S +L EAL+L
Sbjct: 541 PDIVTYNTLIDGFCKVGDMKKAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHL 600
Query: 605 CDQMV------------------------------------------------------- 645
CDQMV
Sbjct: 601 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 660
BLAST of Sed0025332 vs. ExPASy TrEMBL
Match:
A0A6J1I8K2 (pentatricopeptide repeat-containing protein At5g01110 OS=Cucurbita maxima OX=3661 GN=LOC111472364 PE=4 SV=1)
HSP 1 Score: 949.9 bits (2454), Expect = 5.5e-273
Identity = 505/754 (66.98%), Postives = 564/754 (74.80%), Query Frame = 0
Query: 6 SWSCPLMAAYRLPHPEPTFRT------------------FRTRFHSNHTLQSLQTYYGAP 65
S SCP MAA+RLP P+PTFRT FH ++L + +
Sbjct: 3 SSSCPPMAAHRLPLPKPTFRTRILASTFTYATPLLRANSISFTFHLIYSLPKFHSIHDEA 62
Query: 66 APPNRHPPVSN----SNSFLVENILFNLKLNNV-------------ILVEVLFRCRDNLP 125
+ + H PVS+ SNSFLVE ILF+LK NNV LVEVL+ CR+NL
Sbjct: 63 SGSSNHDPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENLH 122
Query: 126 LGLKFIGLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVES 185
LGLKFI L+SS+CPN KHSS+SLSAMVHFL+R RR+S+AQACILRMVRKSGVSRVEVVES
Sbjct: 123 LGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVES 182
Query: 186 LVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKI 245
+VST G+F SI VSDLLVRTYVQARK REG AFRIL+SKGV VSINACNSLLGGLVKI
Sbjct: 183 IVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILKSKGVSVSINACNSLLGGLVKI 242
Query: 246 GWVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTY 305
GWVDLAWE++GEVVRGG ELNVYTLNIMVNALCKD +I +V LFLSDMEKK VFPD VTY
Sbjct: 243 GWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVTY 302
Query: 306 NTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQ 365
NTLISAYCREG VEEAF+LLNSI S GMEPGLLTYN++INGLCK+ Y+RAK+VLN M Q
Sbjct: 303 NTLISAYCREGFVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIRKYNRAKDVLNQMSQ 362
Query: 366 LGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDR 425
LGL+PDAATYN LLVE CRRD+ISE EEIF EMSR GVLPDL+SFS LI +LA+NG+LD
Sbjct: 363 LGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGNLDL 422
Query: 426 ALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILN 485
AL YFRDMK GLV DN+IYTILIDGFCRNGAISDALKM+DEMLA GCV+DVVAYNTILN
Sbjct: 423 ALTYFRDMKNIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTILN 482
Query: 486 GLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKP 545
GLCKK+MLVDADMLFNEMVE GVFPDFYTFTTLIHGYCKDGNMDRA+N GTMV NLKP
Sbjct: 483 GLCKKKMLVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGTMVRTNLKP 542
Query: 546 DIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYLC 605
DIVTYNTLIDGFCK DDMI KDI+PNH+SYGT++NGFC+S +L EAL+LC
Sbjct: 543 DIVTYNTLIDGFCKVGDMKRAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHLC 602
Query: 606 DQMV-------------------------------------------------------- 645
DQMV
Sbjct: 603 DQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLKD 662
BLAST of Sed0025332 vs. ExPASy TrEMBL
Match:
A0A6J1DJZ9 (pentatricopeptide repeat-containing protein At5g01110 OS=Momordica charantia OX=3673 GN=LOC111020766 PE=4 SV=1)
HSP 1 Score: 933.7 bits (2412), Expect = 4.1e-268
Identity = 498/747 (66.67%), Postives = 552/747 (73.90%), Query Frame = 0
Query: 8 SCPLMAAYRLPHPEPTFRT-------------FRTRFHSN----HTLQSLQTYYGAPAPP 67
SC MAA RLPH TFR R R + N H++ SL + P P
Sbjct: 2 SCTQMAANRLPHLNFTFRARTLALTFTDVEPLLRVRAYFNSLRLHSIFSLSKLHTDPGPS 61
Query: 68 NRHPPVSNSNSFLVENILFNLKLNNVI-------------LVEVLFRCRDNLPLGLKFIG 127
+ H PVS+SNSFLVE ILF LK NNV LVEVLF CR+N+ LG++FIG
Sbjct: 62 D-HQPVSSSNSFLVEKILFGLKQNNVSSLSTSLFHLNASQLVEVLFSCRENVQLGIRFIG 121
Query: 128 LLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVESLVSTSGD 187
L+SSNCPNFKHSSLSLS M+HFL+R R+S+AQA ILRMVRKSGVSRVEVVESLVST
Sbjct: 122 LVSSNCPNFKHSSLSLSVMIHFLVRGGRLSEAQALILRMVRKSGVSRVEVVESLVSTCNS 181
Query: 188 FRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKIGWVDLAW 247
F SI V DLLVRTYVQARK REG AFRILRSKGV VSINACNSLLGGLVKIGWVDLAW
Sbjct: 182 FGSIPLVFDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGWVDLAW 241
Query: 248 EMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISAY 307
E+YGEVVRGG++LN YTLNIMVNALCKD+KIE+V LFLSDMEKK VFPD VTYNTLISAY
Sbjct: 242 EIYGEVVRGGIKLNAYTLNIMVNALCKDRKIENVNLFLSDMEKKGVFPDIVTYNTLISAY 301
Query: 308 CREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPDA 367
CREGLVEEAF+LLN + S GMEPG+LTYN++INGLCK G YS AK+VLN+MLQLGLRPD
Sbjct: 302 CREGLVEEAFELLNLVSSKGMEPGILTYNAIINGLCKTGKYSSAKHVLNEMLQLGLRPDT 361
Query: 368 ATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFRD 427
TYN LLVE+CRRDDI E EIF EMSR GV DL+SFS +IG+L++NGHLDRA + FRD
Sbjct: 362 TTYNTLLVESCRRDDILEAREIFDEMSRHGVRHDLISFSSMIGVLSRNGHLDRACLCFRD 421
Query: 428 MKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKRM 487
MK GLV DN+IYTILIDGFCRNGAISDALKM+DEMLA GCVMDVVAYNTILNGLCKK+M
Sbjct: 422 MKSVGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVMDVVAYNTILNGLCKKKM 481
Query: 488 LVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYNT 547
VDA+MLFNEMVE GVFPDFYTFTTLI+GYCKDGNMD+A+N GTM+ NLKPDIVTYNT
Sbjct: 482 YVDAEMLFNEMVERGVFPDFYTFTTLINGYCKDGNMDKALNLFGTMIHTNLKPDIVTYNT 541
Query: 548 LIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYLCDQMVEQ- 607
LIDGFCK DDM KDILPNHISYG ++NGFCNS HL EAL LC+QMVEQ
Sbjct: 542 LIDGFCKVGEVERAKELWDDMTRKDILPNHISYGIVINGFCNSGHLSEALRLCEQMVEQG 601
Query: 608 ------------------------------------------------------------ 645
Sbjct: 602 IKLNLITCNTLIKGHCRSGDMSKAYACLSKMISNGITPDSISYNTLIDGYVKEGNVEKAL 661
BLAST of Sed0025332 vs. ExPASy TrEMBL
Match:
A0A1S3BNF5 (pentatricopeptide repeat-containing protein At5g01110 OS=Cucumis melo OX=3656 GN=LOC103491986 PE=4 SV=1)
HSP 1 Score: 867.8 bits (2241), Expect = 2.8e-248
Identity = 475/753 (63.08%), Postives = 541/753 (71.85%), Query Frame = 0
Query: 12 MAAYRLPHPEPTFRT-------------FRTRFH----------SNHTLQSLQTYYGAPA 71
MA +RLP P+ TFR+ T F+ SN L+ LQT P
Sbjct: 1 MAVHRLPLPKSTFRSGILSSKFTSSTPLLPTNFNSFKLHTIYSPSNTALRFLQT-QSTPG 60
Query: 72 PPNRHPPVSN----SNSFLVENILFNLKLNNV-------------ILVEVLFRCRDNLPL 131
P + PVS+ S+SFL+E ILF+LK NNV +L++VLFRCR++L L
Sbjct: 61 P--LYDPVSSSVSPSDSFLLEKILFSLKQNNVSYLRDSLLRLSPSLLLQVLFRCREDLHL 120
Query: 132 GLKFIGLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVESL 191
GLKFIGL+S PNFKHSSLSLSAMVHFL+R RR+S+AQACILRMVRK GVSRV+VVESL
Sbjct: 121 GLKFIGLVSYYFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKRGVSRVKVVESL 180
Query: 192 VSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKIG 251
+ST +F SI V DLLVRTYVQA+K REG AF+ILR KGV VSINACN LLGGLV+ G
Sbjct: 181 ISTCFNFGSIGLVYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTG 240
Query: 252 WVDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTYN 311
WVDLAWE+YGEVVRGG+ELNVYTLNIMVNALCKD+K E+V FLSDME+K VF D VTYN
Sbjct: 241 WVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEEKGVFADIVTYN 300
Query: 312 TLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQL 371
TLI AYCREGLVEEAF+LLNS S GMEPG+LTYN+++ GLCK+G Y RAK VL +MLQL
Sbjct: 301 TLIRAYCREGLVEEAFQLLNSFSSRGMEPGVLTYNAILVGLCKVGKYDRAKGVLIEMLQL 360
Query: 372 GLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDRA 431
GL P+AATYN LLVE CRRD+I E +EIF EMSR GVLPDLVSFS LIG+LA+NGHL +A
Sbjct: 361 GLTPNAATYNILLVEICRRDNILEAQEIFDEMSRHGVLPDLVSFSSLIGVLARNGHLSQA 420
Query: 432 LMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILNG 491
LMYFR+M+R GLV DN+IYTILIDGFCRNGA+SDALKM+DEMLA G MDVV YNT LNG
Sbjct: 421 LMYFREMERSGLVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGFFMDVVTYNTFLNG 480
Query: 492 LCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKPD 551
CKK+ML DADMLF EMVE G+ PDFYTFTTLI GYCKDGNMD+A+N TMV +NLKPD
Sbjct: 481 FCKKKMLADADMLFKEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFETMVRSNLKPD 540
Query: 552 IVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYLCD 611
IVTYNTLIDGFCK DDMI KDILPNHISYG ++NGFC+S L +AL+LCD
Sbjct: 541 IVTYNTLIDGFCKAGEMERAKELWDDMIRKDILPNHISYGIVINGFCSSGLLPQALHLCD 600
Query: 612 QMV--------------------------------------------------------- 645
QMV
Sbjct: 601 QMVEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSISYNTLIDGYLKEE 660
BLAST of Sed0025332 vs. ExPASy TrEMBL
Match:
A0A660KP76 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009846 PE=4 SV=1)
HSP 1 Score: 807.7 bits (2085), Expect = 3.4e-230
Identity = 434/748 (58.02%), Postives = 519/748 (69.39%), Query Frame = 0
Query: 12 MAAYRLPHPEPTFRTFRT-------------RFHS---------NHTLQSLQTYYGAPAP 71
MA RL P+PT RT T R HS NH L++LQT P
Sbjct: 1 MATQRLLSPKPTLRTLTTITKPSFHDQACSHRPHSLSSLPNPDLNHGLRTLQT---GEEP 60
Query: 72 PNRHPPVSNSNSFLVENILFNLK-------------LNNVILVEVLFRCRDNLPLGLKFI 131
+ PP+ S+SFL+E I+F+LK LN +++ EVL R R+NL LG +FI
Sbjct: 61 ASSTPPL--SDSFLLEKIVFSLKQGNPNLLRNHLFRLNPLLVFEVLNRFRENLQLGQRFI 120
Query: 132 GLLSSNCPNFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVESLVSTSG 191
L+ NCPNFKHSS SLSA+VH L+R RR SDAQ+ ILRM+RKSGVSRVE+VESL S
Sbjct: 121 DLIVLNCPNFKHSSQSLSAIVHVLVRSRRQSDAQSFILRMIRKSGVSRVEIVESLTSVGD 180
Query: 192 DFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKIGWVDLA 251
+F S V DLL+RTYVQARK REG AFR LRSKG CVSINACNSLLGGLVK+GWVDLA
Sbjct: 181 NFGSNSLVFDLLIRTYVQARKLREGSEAFRALRSKGFCVSINACNSLLGGLVKVGWVDLA 240
Query: 252 WEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISA 311
WE+YGEVVR G++LNVYTLNIMVNALCKD+KI++V++FLSDME+K VFPD VTYNTLIS
Sbjct: 241 WEVYGEVVRSGIDLNVYTLNIMVNALCKDRKIDNVRMFLSDMEEKGVFPDIVTYNTLISG 300
Query: 312 YCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPD 371
YCREGL++EAF++LNS+ G++PGL TYN++INGLCK G Y RAK VL++ML G+ PD
Sbjct: 301 YCREGLLDEAFEILNSMSGKGLKPGLFTYNAIINGLCKKGKYGRAKEVLDEMLDNGVSPD 360
Query: 372 AATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFR 431
ATYN LLVE+ R D+I E EEIF+EMS RGV+PDLVSFS LIG+ +NGHLD+AL++FR
Sbjct: 361 TATYNTLLVESGRNDNILEAEEIFNEMSHRGVVPDLVSFSSLIGVFTRNGHLDQALVHFR 420
Query: 432 DMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKR 491
+MK+ GLV DN+IYTILIDG+CRNG +S ALKM+DEML HGC MDVV YNTILNGLC+ +
Sbjct: 421 NMKKTGLVPDNVIYTILIDGYCRNGIMSGALKMRDEMLQHGCAMDVVTYNTILNGLCRGK 480
Query: 492 MLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYN 551
ML DAD LFNEMVE GVFPDF TFTTLI+GYCKD NM++A++ TM NLKPDIVTYN
Sbjct: 481 MLADADELFNEMVEKGVFPDFCTFTTLINGYCKDWNMNKALSLFETMTQRNLKPDIVTYN 540
Query: 552 TLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYLCDQMV-- 611
TLIDGFCK DMIS+ I PNHISYG L+NGFC +L +A L D+MV
Sbjct: 541 TLIDGFCKVGEMEKAEELWGDMISRGISPNHISYGILINGFCIMGYLSDAFRLWDEMVEK 600
Query: 612 ------------------------------------------------------------ 645
Sbjct: 601 GIRPSLVTCNTIIKGYCRSGNVLEADDFLSKMMLKGVVPDSITFNTLINGYVKEEIMDKA 660
BLAST of Sed0025332 vs. TAIR 10
Match:
AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 652.1 bits (1681), Expect = 4.6e-187
Identity = 343/682 (50.29%), Postives = 444/682 (65.10%), Query Frame = 0
Query: 57 SNSNSFLVENILFNLK------------LNNVILVEVLFRCRDNLPLGLKFIGLLSSNCP 116
S S+SFLVE I F+LK LN + +VEVL+RCR++L LG +F+ L + P
Sbjct: 48 SVSDSFLVEKICFSLKQGNNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFP 107
Query: 117 NFKHSSLSLSAMVHFLLRCRRVSDAQACILRMVRKSGVSRVEVVESLVSTSGDFRSIDFV 176
NFKH+SLSLSAM+H L+R R+SDAQ+C+LRM+R+SGVSR+E+V SL ST + S D V
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 167
Query: 177 SDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKIGWVDLAWEMYGEVV 236
DLL+RTYVQARK RE AF +LRSKG VSI+ACN+L+G LV+IGWV+LAW +Y E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 237 RGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISAYCREGLVE 296
R GV +NVYTLNIMVNALCKD K+E V FLS +++K V+PD VTYNTLISAY +GL+E
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 297 EAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPDAATYNPLL 356
EAF+L+N++ G PG+ TYN++INGLCK G Y RAK V +ML+ GL PD+ TY LL
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 357 VETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFRDMKRFGLV 416
+E C++ D+ E E++F +M R V+PDLV FS ++ + ++G+LD+ALMYF +K GL+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 417 LDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKRMLVDADML 476
DN+IYTILI G+CR G IS A+ +++EML GC MDVV YNTIL+GLCK++ML +AD L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 477 FNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYNTLIDGFCK 536
FNEM E +FPD YT T LI G+CK GN+ AM M ++ D+VTYNTL+DGF K
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 537 -----------DDMISKDILPNHISYGTLMNGFCNSCHLYEALYLCDQMV---------- 596
DM+SK+ILP ISY L+N C+ HL EA + D+M+
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 597 ------------------------------------------------------------ 645
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
BLAST of Sed0025332 vs. TAIR 10
Match:
AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 287.7 bits (735), Expect = 2.3e-77
Identity = 171/586 (29.18%), Postives = 308/586 (52.56%), Query Frame = 0
Query: 69 FNLKLNNVILVEVLFRCRDNLPLGLKFIGLLSSNCPNFKHSSL-SLSAMVHFLLRCRRVS 128
+ K L+ VL + + + L L F S + S+L SL ++H + + +
Sbjct: 81 YECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR----RDSNLESLCIVIHLAVASKDLK 140
Query: 129 DAQACILRMVRKSGV----SRVEVVESLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCG 188
AQ+ I + + S V+ + LV T D+ S V D+ + V RE
Sbjct: 141 VAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARR 200
Query: 189 AFRILRSKGVCVSINACNSLLGGLVKIGW-VDLAWEMYGEVVRGGVELNVYTLNIMVNAL 248
F + + G+ +S+++CN L L K + A ++ E GV NV + NI+++ +
Sbjct: 201 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 260
Query: 249 CKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISAYCREGLVEEAFKLLNSIYSMGMEPGL 308
C+ +I+ L ME K PD ++Y+T+++ YCR G +++ +KL+ + G++P
Sbjct: 261 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 320
Query: 309 LTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPDAATYNPLLVETCRRDDISEGEEIFHE 368
Y S+I LC++ + A+ ++M++ G+ PD Y L+ C+R DI + F+E
Sbjct: 321 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 380
Query: 369 MSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFRDMKRFGLVLDNIIYTILIDGFCRNGA 428
M R + PD+++++ +I + G + A F +M GL D++ +T LI+G+C+ G
Sbjct: 381 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 440
Query: 429 ISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTT 488
+ DA ++ + M+ GC +VV Y T+++GLCK+ L A+ L +EM ++G+ P+ +T+ +
Sbjct: 441 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 500
Query: 489 LIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYNTLIDGFCKD-----------DMISKD 548
+++G CK GN++ A+ +G +A L D VTY TL+D +CK +M+ K
Sbjct: 501 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 560
Query: 549 ILPNHISYGTLMNGFCNSCHLYEALYLCDQMVEQRRLQVDVITYNVILKGFCAKGRMQEA 608
+ P +++ LMNGFC L + L + M+ + + + T+N ++K +C + ++ A
Sbjct: 561 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYCIRNNLKAA 620
Query: 609 EQVLKKMIENGINPDKATYSSLINGHVSQENMKDAFRFHDEMLQRG 638
+ K M G+ PD TY +L+ GH NMK+A+ EM +G
Sbjct: 621 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
BLAST of Sed0025332 vs. TAIR 10
Match:
AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 287.7 bits (735), Expect = 2.3e-77
Identity = 171/586 (29.18%), Postives = 308/586 (52.56%), Query Frame = 0
Query: 69 FNLKLNNVILVEVLFRCRDNLPLGLKFIGLLSSNCPNFKHSSL-SLSAMVHFLLRCRRVS 128
+ K L+ VL + + + L L F S + S+L SL ++H + + +
Sbjct: 81 YECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR----RDSNLESLCIVIHLAVASKDLK 140
Query: 129 DAQACILRMVRKSGV----SRVEVVESLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCG 188
AQ+ I + + S V+ + LV T D+ S V D+ + V RE
Sbjct: 141 VAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARR 200
Query: 189 AFRILRSKGVCVSINACNSLLGGLVKIGW-VDLAWEMYGEVVRGGVELNVYTLNIMVNAL 248
F + + G+ +S+++CN L L K + A ++ E GV NV + NI+++ +
Sbjct: 201 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 260
Query: 249 CKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISAYCREGLVEEAFKLLNSIYSMGMEPGL 308
C+ +I+ L ME K PD ++Y+T+++ YCR G +++ +KL+ + G++P
Sbjct: 261 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 320
Query: 309 LTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPDAATYNPLLVETCRRDDISEGEEIFHE 368
Y S+I LC++ + A+ ++M++ G+ PD Y L+ C+R DI + F+E
Sbjct: 321 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 380
Query: 369 MSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFRDMKRFGLVLDNIIYTILIDGFCRNGA 428
M R + PD+++++ +I + G + A F +M GL D++ +T LI+G+C+ G
Sbjct: 381 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 440
Query: 429 ISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTT 488
+ DA ++ + M+ GC +VV Y T+++GLCK+ L A+ L +EM ++G+ P+ +T+ +
Sbjct: 441 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 500
Query: 489 LIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYNTLIDGFCKD-----------DMISKD 548
+++G CK GN++ A+ +G +A L D VTY TL+D +CK +M+ K
Sbjct: 501 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 560
Query: 549 ILPNHISYGTLMNGFCNSCHLYEALYLCDQMVEQRRLQVDVITYNVILKGFCAKGRMQEA 608
+ P +++ LMNGFC L + L + M+ + + + T+N ++K +C + ++ A
Sbjct: 561 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYCIRNNLKAA 620
Query: 609 EQVLKKMIENGINPDKATYSSLINGHVSQENMKDAFRFHDEMLQRG 638
+ K M G+ PD TY +L+ GH NMK+A+ EM +G
Sbjct: 621 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
BLAST of Sed0025332 vs. TAIR 10
Match:
AT2G15630.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 280.4 bits (716), Expect = 3.6e-75
Identity = 153/460 (33.26%), Postives = 249/460 (54.13%), Query Frame = 0
Query: 166 DLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGGLVKIGWVDLAWEMYGEVVR 225
DLLVR Q R E F +++ KG CN +L L ++ ++ AW Y ++ R
Sbjct: 159 DLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYR 218
Query: 226 GGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFPDTVTYNTLISAYCREGLVEE 285
++ NVYT NIM+N LCK+ K++ K FL ME + P VTYNTL+ + G +E
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG 278
Query: 286 AFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVLNDMLQLGLRPDAATYNPLLV 345
A +++ + S G +P + TYN +++ +C G RA VL +M ++GL PD+ +YN L+
Sbjct: 279 ARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIR 338
Query: 346 ETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKNGHLDRALMYFRDMKRFGLVL 405
D+ EM ++G++P +++ LI L ++ A + R+++ G+VL
Sbjct: 339 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 398
Query: 406 DNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAYNTILNGLCKKRMLVDADMLF 465
D++ Y ILI+G+C++G A + DEM+ G Y +++ LC+K +AD LF
Sbjct: 399 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 458
Query: 466 NEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVSANLKPDIVTYNTLIDGFCKD 525
++V G+ PD TL+ G+C GNMDRA + L M ++ PD VTYN L+ G C +
Sbjct: 459 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 518
Query: 526 -----------DMISKDILPNHISYGTLMNGFCNSCHLYEALYLCDQMVEQRRLQVDVIT 585
+M + I P+HISY TL++G+ A + D+M+ ++T
Sbjct: 519 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML-SLGFNPTLLT 578
Query: 586 YNVILKGFCAKGRMQEAEQVLKKMIENGINPDKATYSSLI 615
YN +LKG + AE++L++M GI P+ +++ S+I
Sbjct: 579 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
BLAST of Sed0025332 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 275.8 bits (704), Expect = 8.9e-74
Identity = 160/555 (28.83%), Postives = 275/555 (49.55%), Query Frame = 0
Query: 147 VVESLVSTSGDFRSIDFVSDLLVRTYVQARKFREGCGAFRILRSKGVCVSINACNSLLGG 206
V +SL T S V DL+V++Y + + + ++ G + + N++L
Sbjct: 119 VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA 178
Query: 207 LVKIGW-VDLAWEMYGEVVRGGVELNVYTLNIMVNALCKDKKIESVKLFLSDMEKKRVFP 266
++ + A ++ E++ V NV+T NI++ C I+ ME K P
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 267 DTVTYNTLISAYCREGLVEEAFKLLNSIYSMGMEPGLLTYNSMINGLCKLGTYSRAKNVL 326
+ VTYNTLI YC+ +++ FKLL S+ G+EP L++YN +INGLC+ G VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 327 NDMLQLGLRPDAATYNPLLVETCRRDDISEGEEIFHEMSRRGVLPDLVSFSPLIGMLAKN 386
+M + G D TYN L+ C+ + + + EM R G+ P +++++ LI + K
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 387 GHLDRALMYFRDMKRFGLVLDNIIYTILIDGFCRNGAISDALKMQDEMLAHGCVMDVVAY 446
G+++RA+ + M+ GL + YT L+DGF + G +++A ++ EM +G VV Y
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 447 NTILNGLCKKRMLVDADMLFNEMVEMGVFPDFYTFTTLIHGYCKDGNMDRAMNFLGTMVS 506
N ++NG C + DA + +M E G+ PD +++T++ G+C+ ++D A+ MV
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 507 ANLKPDIVTYNTLIDGFCK-----------DDMISKDILPNHISYGTLMNGFCNSCHLYE 566
+KPD +TY++LI GFC+ ++M+ + P+ +Y L+N +C L +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 567 ALYLCDQMVEQRRLQVDVITYNV------------------------------------- 626
AL L ++MVE+ L DV+TY+V
Sbjct: 539 ALQLHNEMVEKGVLP-DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 598
Query: 627 -------------ILKGFCAKGRMQEAEQVLKKMIENGINPDKATYSSLINGHVSQENMK 640
++KGFC KG M EA+QV + M+ PD Y+ +I+GH +++
Sbjct: 599 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 658
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038879208.1 | 4.0e-278 | 68.52 | pentatricopeptide repeat-containing protein At5g01110 [Benincasa hispida] >XP_03... | [more] |
XP_022933790.1 | 1.0e-273 | 67.28 | pentatricopeptide repeat-containing protein At5g01110 [Cucurbita moschata] | [more] |
KAG6588214.1 | 6.7e-273 | 66.89 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022973817.1 | 1.1e-272 | 66.98 | pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima] >XP_022... | [more] |
XP_023530884.1 | 5.6e-272 | 66.62 | pentatricopeptide repeat-containing protein At5g01110 [Cucurbita pepo subsp. pep... | [more] |
Match Name | E-value | Identity | Description | |
Q9LFC5 | 6.4e-186 | 50.29 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
Q0WVK7 | 3.2e-76 | 29.18 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
Q9ZQF1 | 5.1e-74 | 33.26 | Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidop... | [more] |
Q9FIX3 | 1.3e-72 | 28.83 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q6NQ83 | 2.8e-72 | 32.74 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F5T7 | 5.0e-274 | 67.28 | pentatricopeptide repeat-containing protein At5g01110 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1I8K2 | 5.5e-273 | 66.98 | pentatricopeptide repeat-containing protein At5g01110 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1DJZ9 | 4.1e-268 | 66.67 | pentatricopeptide repeat-containing protein At5g01110 OS=Momordica charantia OX=... | [more] |
A0A1S3BNF5 | 2.8e-248 | 63.08 | pentatricopeptide repeat-containing protein At5g01110 OS=Cucumis melo OX=3656 GN... | [more] |
A0A660KP76 | 3.4e-230 | 58.02 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009846 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G01110.1 | 4.6e-187 | 50.29 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G05670.1 | 2.3e-77 | 29.18 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G05670.2 | 2.3e-77 | 29.18 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT2G15630.1 | 3.6e-75 | 33.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 8.9e-74 | 28.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |