Sed0025308 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAAAAAAACATCTATATAAGCATATGAAACACTCACATCTTTACCTCAATTTCGTCACAGAATTAAAAACGCTTAGACAAAACAAGCAAGAAAAAATGTGTGCCGGAAAGAGCTGGACGGCGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGATCAAGGCCACTTGTGCCGGTGGAACTCGGCTGTGAGGGCTCTGTCTCAGCCTAATAAGCTTTCTTCTTCGACTTCGGCCGCGGCGGCGGTTAGGGATTCGGGTGAAGTTAAAAGGGAAGATCAAAGTAAAACCAAGCAGTCTGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGATTTTTTGTTTTTTTTAGAAAAAATCTTAAGTGGGGAGGAACTCATGAACGTAGCTTCATGTGTGTACCATTTTTGTAGATGTTTGTTTAATTTCATCATGTGTGAAATCGAATAATAATGACTAGAATTAATGCATAATTCAATTTGGATTAGGGTTTGCTTCAAGGAGAAATTGTTTTTTTTTTACTCTATAAAATATGGTAGGCTAAATTAACATTTTAAACTTTGTTAGGGTCCTTTTTGAAAATATAAATAAAGCTTAGCAAACGATATCTTACTCATC ACAAAAAAACATCTATATAAGCATATGAAACACTCACATCTTTACCTCAATTTCGTCACAGAATTAAAAACGCTTAGACAAAACAAGCAAGAAAAAATGTGTGCCGGAAAGAGCTGGACGGCGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGATCAAGGCCACTTGTGCCGGTGGAACTCGGCTGTGAGGGCTCTGTCTCAGCCTAATAAGCTTTCTTCTTCGACTTCGGCCGCGGCGGCGGTTAGGGATTCGGGTGAAGTTAAAAGGGAAGATCAAAGTAAAACCAAGCAGTCTGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGATTTTTTGTTTTTTTTAGAAAAAATCTTAAGTGGGGAGGAACTCATGAACGTAGCTTCATGTGTGTACCATTTTTGTAGATGTTTGTTTAATTTCATCATGTGTGAAATCGAATAATAATGACTAGAATTAATGCATAATTCAATTTGGATTAGGGTTTGCTTCAAGGAGAAATTGTTTTTTTTTTACTCTATAAAATATGGTAGGCTAAATTAACATTTTAAACTTTGTTAGGGTCCTTTTTGAAAATATAAATAAAGCTTAGCAAACGATATCTTACTCATC ATGAAACACTCACATCTTTACCTCAATTTCGTCACAGAATTAAAAACGCTTAGACAAAACAAGCAAGAAAAAATGTGTGCCGGAAAGAGCTGGACGGCGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGATCAAGGCCACTTGTGCCGGTGGAACTCGGCTGTGAGGGCTCTGTCTCAGCCTAATAAGCTTTCTTCTTCGACTTCGGCCGCGGCGGCGGTTAGGGATTCGGGTGAAGTTAAAAGGGAAGATCAAAGTAAAACCAAGCAGTCTGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGA MKHSHLYLNFVTELKTLRQNKQEKMCAGKSWTAAAAASIGAVEALKDQGHLCRWNSAVRALSQPNKLSSSTSAAAAVRDSGEVKREDQSKTKQSEESLRTVMYLSCWGPY Homology
BLAST of Sed0025308 vs. NCBI nr
Match: KAG6589196.1 (hypothetical protein SDJN03_17761, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.5 bits (319), Expect = 7.2e-26 Identity = 68/88 (77.27%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of Sed0025308 vs. NCBI nr
Match: KAG7022896.1 (hypothetical protein SDJN02_16632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24 Identity = 69/102 (67.65%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Sed0025308 vs. NCBI nr
Match: KAE8645761.1 (hypothetical protein Csa_020242 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 7.4e-23 Identity = 72/105 (68.57%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Sed0025308 vs. NCBI nr
Match: KAA0031601.1 (hypothetical protein E6C27_scaffold139G003690 [Cucumis melo var. makuwa] >TYK07053.1 hypothetical protein E5676_scaffold13G003710 [Cucumis melo var. makuwa]) HSP 1 Score: 114.4 bits (285), Expect = 6.3e-22 Identity = 69/94 (73.40%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of Sed0025308 vs. NCBI nr
Match: RWW15807.1 (hypothetical protein GW17_00020342 [Ensete ventricosum] >RZR91864.1 hypothetical protein BHM03_00020058 [Ensete ventricosum]) HSP 1 Score: 88.6 bits (218), Expect = 3.7e-14 Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of Sed0025308 vs. ExPASy TrEMBL
Match: A0A0A0K1Q6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046680 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.3e-22 Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Sed0025308 vs. ExPASy TrEMBL
Match: A0A5D3C541 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003710 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 3.0e-22 Identity = 69/94 (73.40%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of Sed0025308 vs. ExPASy TrEMBL
Match: A0A444EZN7 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00020342 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14 Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of Sed0025308 vs. ExPASy TrEMBL
Match: A0A4S8J4J3 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb11t16490 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.3e-14 Identity = 53/90 (58.89%), Postives = 62/90 (68.89%), Query Frame = 0
BLAST of Sed0025308 vs. ExPASy TrEMBL
Match: I3SXZ3 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.0e-14 Identity = 50/92 (54.35%), Postives = 61/92 (66.30%), Query Frame = 0
BLAST of Sed0025308 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein ) HSP 1 Score: 79.0 bits (193), Expect = 2.7e-15 Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of Sed0025308 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein ) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13 Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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