Sed0025293 (gene) Chayote v1

Overview


Name	Sed0025293
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cyclic phosphodiesterase-like
Location	LG14: 23614966 .. 23617536 (+)
RNA-Seq Expression	Sed0025293
Synteny	Sed0025293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATAATCCAGAGCCCTGCCTTATCCAAACCTGTGAAGGTGAGAATAATAATAGTAATAATCATTTGTATTCCATGTGGGCTCTTCCTCCAGATGATGTGGGCACCAGAATCAAGACTCTGATGGAGAGCCTGAGAGCCGAGTTCGGAGGGCCCCAGTTCGAGCCTCATATCACCGTCGTTGGTGCCCTCCGTCTCGCCCCCGACGATGCGCTCGACAAGTTCCGGTCCGCCTGCTCGGGGCTTAAGACTTTTCAAGCCACTGTCGATCGTGTCTCTATTGGAACCTTGTACTATCAGTGTGTCTTCCTCCTCATTCATCCCACCACACAGGTTAGTTTACAAGTAGGGGGTGTACATGATCTGGTTGAGTTGGTTTCGATCAATTTTTAAGATCCAACCAATAATTTTGGATTGGTTAATTATATTTTGGGCTTGGATTGAATTGGGTTTTTTTTAGCTGTGTTAATGCATTTATTCTTCTATGACACTAACCTATTTATACCAAGTAATATATAAACAAGTAAATAAAATAGGGAGATACTATATTTATGAACCTATCTTATTAAATATATTCTCTCTGAGTTGAGTTGGATTGAAAGAGACAAAAATTGGTCAACCATTTTCTTAGTACAAAATTGGTCAAATCTAAGAATTAACCAAACTCAACAGAAAATTTTAAAAAAATCATAACTCATATCATCCCAAATAAAATTATAATCCAACCCATCCCATCCCATCCAAAATAATAATAATAAAATAATACAATCCATCCCTTACAATTTGAGTTGGACAGTCCGAGTTACTTGGTTTGTCGATTCTTCTGTACTCCCCTAATAACACTACAATATTTTTTTTCAATTAATTATTAGATACATGGTTAGATAGAACTCATAATTTCTTAGTGTCATGTTCTCTTGCATGTTGAGGATTCAAAAAAGTGAGCATGCTTACGATGTTTTATAAGAAATATGGATTACTCCTCTCGTAATCAATTGATTTTGAGATGTAACTTCATACTGTTAAAGATAGTATAACTGCACCTTAAGGTCAAACGAGTATTCGATCTAATAAATTAAATAAAATTGAGATCAATCCAAGATGGATGAACCTAAAGAAGCACCATCTTAAAAGGTATATTGATGATCCCACATTCGAAAAATAAACAGATATCACAACCTTTATAAAATAAGATATATATTTTTCTTATGATCCGTTGATTTTGAGATGTAACTGCCAAAATTATAGGCCAAATGTTTATCATTCTGCTTTTCCTTAGCCCCATATTAATTGGTACATCAGCAAGAACTACCTTTTGGATGAAACACAAAACAAACTTATAACCAAAATAATATATATACCATATTCATATGTATATTTGTGGAAGGTGTTGTCCTAACACACCCTTATTTTTCAGATGGTGGAGACTAGTACACATTGCTGTGGATTATTTGGTTACAATAACACTACTCGTACGTTTACTCATTCTCTTGCGTTCATTTCTGATCATCTTTCTGTTTCTTTGTGTTTGAAATTTCTCGGATTGTGAGTGCTTCGACCAGGCCGAAAGTTGATATTTCCGGGTCAGATTTGTGTATTTATTGACTACGATTACATGATCCACATTCGGATTTTACATCTTTGGTGTTCATAAACTCCTAGGATTTGATAACTTTGTTGCTATTGTTCATCTTGATGGTGATACTAAATGTAATGGCAACTGTCTACAATCTGGTCTGTGTAAACAGTCAAAGTAGTTGAGCTATAAGAATGAAAACATGGAAGTATTCCTTTTTACAATCAAATAATAATATAAACGTGGCCAAGTATGGGGAGACATTGAAAGAATTGAGACACGGGAGGTGAGTCTCAAACCTGAAACCTTGAGAGGAGCATACCTTCGAAACTCAAGTTTTCGATCATCGCGTCACTCCTTCGCCGGGACTTTAGTTTAACAACAATAAGAGATGAGAGATTTAAGCTTACACAGTTATCACAGTTGATCAGTTATTGATCTTGTTGACTCGTGTTGATGTTTAAATAATGCCAACAGCTGGGAGTGGAAGATTCAAACTCTCACACATTTATGAGTTATGACAGTTGAGCTCTATTGCTGTTGTTAACTCGTGTTGATGTTTAATTAATGCCGATAACTTGGAGTGGGAGATTCAAACTCACACACTTATGACGGTTGACTAAGTGTAGATGTTTAAGTAATGCATTTCTTTGATCTTCTTATTTGGTATAATATCCACACAATTCCTTGTATGACATTGTCTGCATTATTGCAACTTTCTTCAAGCAGTGAATGTTTGAGTTCGAAAACAAGTTTTTTTTCTCTGAAATGTTGTGTTTGGATCAGCTTACATGCCGCATTTGAGCCTGCTGTATGCGGACTTATCGGAAGAGAAAAAGAAGAAGGCAGAAGAAATAGCGGACAAGCTGAACGAAGGCATTCACGGCCTGAGCTTCCCGGTGACTCGACTTGCACTGTACAAAACAGACATTGAGGATTTAACTCTTAAGTCATGGGAGAAAATTGCAGAGCATGATCTTCCTTCAAATTAG

mRNA sequence

ATGGCGAATAATCCAGAGCCCTGCCTTATCCAAACCTGTGAAGGTGAGAATAATAATAGTAATAATCATTTGTATTCCATGTGGGCTCTTCCTCCAGATGATGTGGGCACCAGAATCAAGACTCTGATGGAGAGCCTGAGAGCCGAGTTCGGAGGGCCCCAGTTCGAGCCTCATATCACCGTCGTTGGTGCCCTCCGTCTCGCCCCCGACGATGCGCTCGACAAGTTCCGGTCCGCCTGCTCGGGGCTTAAGACTTTTCAAGCCACTGTCGATCGTGTCTCTATTGGAACCTTGTACTATCAGTGTGTCTTCCTCCTCATTCATCCCACCACACAGATGGTGGAGACTAGTACACATTGCTGTGGATTATTTGGTTACAATAACACTACTCCTTACATGCCGCATTTGAGCCTGCTGTATGCGGACTTATCGGAAGAGAAAAAGAAGAAGGCAGAAGAAATAGCGGACAAGCTGAACGAAGGCATTCACGGCCTGAGCTTCCCGGTGACTCGACTTGCACTGTACAAAACAGACATTGAGGATTTAACTCTTAAGTCATGGGAGAAAATTGCAGAGCATGATCTTCCTTCAAATTAG

Coding sequence (CDS)

ATGGCGAATAATCCAGAGCCCTGCCTTATCCAAACCTGTGAAGGTGAGAATAATAATAGTAATAATCATTTGTATTCCATGTGGGCTCTTCCTCCAGATGATGTGGGCACCAGAATCAAGACTCTGATGGAGAGCCTGAGAGCCGAGTTCGGAGGGCCCCAGTTCGAGCCTCATATCACCGTCGTTGGTGCCCTCCGTCTCGCCCCCGACGATGCGCTCGACAAGTTCCGGTCCGCCTGCTCGGGGCTTAAGACTTTTCAAGCCACTGTCGATCGTGTCTCTATTGGAACCTTGTACTATCAGTGTGTCTTCCTCCTCATTCATCCCACCACACAGATGGTGGAGACTAGTACACATTGCTGTGGATTATTTGGTTACAATAACACTACTCCTTACATGCCGCATTTGAGCCTGCTGTATGCGGACTTATCGGAAGAGAAAAAGAAGAAGGCAGAAGAAATAGCGGACAAGCTGAACGAAGGCATTCACGGCCTGAGCTTCCCGGTGACTCGACTTGCACTGTACAAAACAGACATTGAGGATTTAACTCTTAAGTCATGGGAGAAAATTGCAGAGCATGATCTTCCTTCAAATTAG

Protein sequence

MANNPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVGALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGLFGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLTLKSWEKIAEHDLPSN

Homology

[Close]

BLAST of Sed0025293 vs. NCBI nr
Match: XP_038882567.1 (cyclic phosphodiesterase-like [Benincasa hispida])

HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78
Identity = 142/195 (72.82%), Postives = 166/195 (85.13%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NPE   IQ  E ENN     +YS+WALPP+DV  RIK LM SLR+EFGGPQFEPHITVVG
Sbjct: 3   NPESASIQPSEAENN-----VYSVWALPPEDVTARIKNLMNSLRSEFGGPQFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL PDDAL+KFRSAC GLK +QATVD VS GT +YQCVFLLIH TT++VETS+HCCG 
Sbjct: 63  AIRLTPDDALNKFRSACQGLKAYQATVDHVSTGTFFYQCVFLLIHSTTEVVETSSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FGY N+TPYMPH+SLLYA++S+EKKK+A+ IADKL+E ++GL FP+TRLALYKTD ED T
Sbjct: 123 FGYKNSTPYMPHMSLLYANISDEKKKQAKVIADKLDEAVNGLKFPITRLALYKTDTEDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKIAEH+LPS+
Sbjct: 183 LKSWEKIAEHELPSS 192

[Close]

BLAST of Sed0025293 vs. NCBI nr
Match: KAG6594517.1 (Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301.6 bits (771), Expect = 5.0e-78
Identity = 140/194 (72.16%), Postives = 165/194 (85.05%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NP    I+ CEGE       LYS+WALPP+DV T+I +LM SLR+EFGGP+FEPHITVVG
Sbjct: 3   NPNSAPIEPCEGE-------LYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL P DAL+KFRSAC G+K +QATVD+VSIGT +YQCVFLLIHPTT++V+ S+HCCG 
Sbjct: 63  AIRLTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FGYNN+TPYMPHLSLLYA++S+E KK+A+EIADKLNE ++GL  PVTRLALYKTD  D T
Sbjct: 123 FGYNNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTSDET 182

Query: 184 LKSWEKIAEHDLPS 198
           LKSWEKIAEHDLPS
Sbjct: 183 LKSWEKIAEHDLPS 189

[Close]

BLAST of Sed0025293 vs. NCBI nr
Match: KAG6581386.1 (Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301.2 bits (770), Expect = 6.5e-78
Identity = 143/195 (73.33%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NPE   IQ  EGE N     +YS+WALPP+DV  RI+TLM SLR+EFGGPQFEPHITVVG
Sbjct: 3   NPESTPIQPSEGEKN-----VYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL  DDAL+KFRSAC GLK +QATVD VS GT +YQCVFLLIHPTT++VETS+HCCG 
Sbjct: 63  AIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTKVVETSSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FGYNN+TPYMPHLSLLYA++S+E+KK+A+E+A+KL+E I+GLSFP+TRLALYKTD  D T
Sbjct: 123 FGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKIAE DLPS+
Sbjct: 183 LKSWEKIAEQDLPSS 192

[Close]

BLAST of Sed0025293 vs. NCBI nr
Match: XP_022926309.1 (cyclic phosphodiesterase-like [Cucurbita moschata])

HSP 1 Score: 301.2 bits (770), Expect = 6.5e-78
Identity = 140/195 (71.79%), Postives = 166/195 (85.13%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NP    I+ CEGE       LYS+WALPP+DV T+I +LM SLR+EFGGP+FEPHITVVG
Sbjct: 3   NPNSAPIEPCEGE-------LYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL P DAL+KFRSAC G+K +QATVD+VSIGT +YQCVFLLIHPTT++V+ S+HCCG 
Sbjct: 63  AIRLTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FGYNN+TPYMPHLSLLYA++S+E KK+A+EIADKLNE ++GL  PVTRLALYKTD  D T
Sbjct: 123 FGYNNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKIAEHDLPS+
Sbjct: 183 LKSWEKIAEHDLPSS 190

[Close]

BLAST of Sed0025293 vs. NCBI nr
Match: XP_022978766.1 (cyclic phosphodiesterase-like [Cucurbita maxima])

HSP 1 Score: 300.8 bits (769), Expect = 8.5e-78
Identity = 144/195 (73.85%), Postives = 167/195 (85.64%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NPE   IQ  EGE N     +YS+WALPP+DV  RI+TLM SLR+EFGGPQFEPHITVVG
Sbjct: 3   NPESPTIQPSEGEKN-----VYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL  DDAL+KFRSAC GLK +QATVD VS GT +YQCVFLLIHPTTQ+VETS+HCCG 
Sbjct: 63  AIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FGY N+TPYMPHLSLLYA++S+E+KK+A+E+A+KL+E I+GLSFPVTRLALYKTD  D T
Sbjct: 123 FGYKNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPVTRLALYKTDTGDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKIAE DLPS+
Sbjct: 183 LKSWEKIAEQDLPSS 192

[Close]

BLAST of Sed0025293 vs. ExPASy Swiss-Prot
Match: O04147 (Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.6e-49
Identity = 92/168 (54.76%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 24  LYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVGALRLAPDDALDKFRSACSGL 83
           +YS+WALP ++   R K LME+LR+EF GP+F PH+TV  +  L  D+A   F SAC GL
Sbjct: 8   VYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFESACDGL 67

Query: 84  KTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGLFGYNNTTPYMPHLSLLYADL 143
           K + ATVDRVS GT ++QCVFLL+  T +++E   HC   F  + TTPYMPHLSLLYA+L
Sbjct: 68  KAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLSLLYAEL 127

Query: 144 SEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLTLKSWEKIA 192
           +EE+KK A+E A  L+  + GLSF + RLAL KTD ED TL++WE +A
Sbjct: 128 TEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVA 175

[Close]

BLAST of Sed0025293 vs. ExPASy TrEMBL
Match: A0A6J1EEQ8 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433501 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.2e-78
Identity = 140/195 (71.79%), Postives = 166/195 (85.13%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NP    I+ CEGE       LYS+WALPP+DV T+I +LM SLR+EFGGP+FEPHITVVG
Sbjct: 3   NPNSAPIEPCEGE-------LYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL P DAL+KFRSAC G+K +QATVD+VSIGT +YQCVFLLIHPTT++V+ S+HCCG 
Sbjct: 63  AIRLTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FGYNN+TPYMPHLSLLYA++S+E KK+A+EIADKLNE ++GL  PVTRLALYKTD  D T
Sbjct: 123 FGYNNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKIAEHDLPS+
Sbjct: 183 LKSWEKIAEHDLPSS 190

[Close]

BLAST of Sed0025293 vs. ExPASy TrEMBL
Match: A0A6J1INY2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.1e-78
Identity = 144/195 (73.85%), Postives = 167/195 (85.64%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NPE   IQ  EGE N     +YS+WALPP+DV  RI+TLM SLR+EFGGPQFEPHITVVG
Sbjct: 3   NPESPTIQPSEGEKN-----VYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL  DDAL+KFRSAC GLK +QATVD VS GT +YQCVFLLIHPTTQ+VETS+HCCG 
Sbjct: 63  AIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FGY N+TPYMPHLSLLYA++S+E+KK+A+E+A+KL+E I+GLSFPVTRLALYKTD  D T
Sbjct: 123 FGYKNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPVTRLALYKTDTGDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKIAE DLPS+
Sbjct: 183 LKSWEKIAEQDLPSS 192

[Close]

BLAST of Sed0025293 vs. ExPASy TrEMBL
Match: A0A6J1KNB2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111496852 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.8e-77
Identity = 138/195 (70.77%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NP    I+ CEGE       LYS+WALPP+DV T+I +LM SLR+EFGGP+FEPHITVVG
Sbjct: 3   NPNSAPIEPCEGE-------LYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL P DAL+KFRSAC G+K +QATVD+VSIGT +YQCVFLLIHPTT++V+ S+HCCG 
Sbjct: 63  AIRLTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FG NN+TPYMPHLSLLYA++S+E KK+A+EIADKLNE ++GL  P+TRLALYKTD  D T
Sbjct: 123 FGCNNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPLTRLALYKTDTGDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKIAEHDLPS+
Sbjct: 183 LKSWEKIAEHDLPSS 190

[Close]

BLAST of Sed0025293 vs. ExPASy TrEMBL
Match: A0A6J1EGC1 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.7e-76
Identity = 143/195 (73.33%), Postives = 166/195 (85.13%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NPE   IQ  EGE N     +YS+WALPP+DV  RI+TLM SLR+EFGGPQFEPHITVVG
Sbjct: 3   NPESTPIQPSEGEKN-----VYSVWALPPEDVMARIRTLMNSLRSEFGGPQFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL  DDAL+KFRSAC GLK +QATVD VS GT +YQCVFLLIHPTTQ+VETS+HCCG 
Sbjct: 63  AIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FGY N TPYMPHLSLLYA++S+E+KK+A+E+A+KL+E I+GLSFP+TRLALYKTD  D T
Sbjct: 123 FGYKN-TPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKIAE DLPS+
Sbjct: 183 LKSWEKIAEQDLPSS 191

[Close]

BLAST of Sed0025293 vs. ExPASy TrEMBL
Match: A0A1S3AYZ1 (cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.4e-72
Identity = 131/195 (67.18%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 4   NPEPCLIQTCEGENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVG 63
           NPE   IQ+ E E N     +YS+WALPP+DV  RI+ LM SLR+EFGGPQFEPHITVVG
Sbjct: 3   NPESASIQSSEEETN-----VYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVG 62

Query: 64  ALRLAPDDALDKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGL 123
           A+RL  +DAL+KF +AC G+K +QATVD VS GT +YQCVFLLIHPTT++VETS+H C  
Sbjct: 63  AIRLTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSSHFCKH 122

Query: 124 FGYNNTTPYMPHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLT 183
           FG+ N+TPYMPH+SLLYA +S+EKKK+A+EIADKL+E ++GL FP+TRLAL+KTD  D T
Sbjct: 123 FGFKNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDET 182

Query: 184 LKSWEKIAEHDLPSN 199
           LKSWEKI EHDL S+
Sbjct: 183 LKSWEKIVEHDLSSS 192

[Close]

BLAST of Sed0025293 vs. TAIR 10
Match: AT4G18930.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 195.3 bits (495), Expect = 4.7e-50
Identity = 92/168 (54.76%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 24  LYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVGALRLAPDDALDKFRSACSGL 83
           +YS+WALP ++   R K LME+LR+EF GP+F PH+TV  +  L  D+A   F SAC GL
Sbjct: 8   VYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFESACDGL 67

Query: 84  KTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGLFGYNNTTPYMPHLSLLYADL 143
           K + ATVDRVS GT ++QCVFLL+  T +++E   HC   F  + TTPYMPHLSLLYA+L
Sbjct: 68  KAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLSLLYAEL 127

Query: 144 SEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLTLKSWEKIA 192
           +EE+KK A+E A  L+  + GLSF + RLAL KTD ED TL++WE +A
Sbjct: 128 TEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVA 175

[Close]

BLAST of Sed0025293 vs. TAIR 10
Match: AT4G18940.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.9e-39
Identity = 78/184 (42.39%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 16  ENNNSNNHLYSMWALPPDDVGTRIKTLMESLRAEFGGPQFEPHITVVGAL--RLAPDDAL 75
           E++     +Y++WA+P DDV  R++ LME LR+EFGGP F+PH+T+VG    +L   +A 
Sbjct: 16  EDDEEEKAMYAIWAVPEDDVEDRLQRLMEGLRSEFGGPAFDPHLTLVGPFPYKLTASEAK 75

Query: 76  DKFRSACSGLKTFQATVDRVSIGTLYYQCVFLLIHPTTQMVETSTHCCGLFGYNNTTPYM 135
             F+SAC G K + ATVD+VS GT Y+QC+++ +  T +++  + H    F       Y+
Sbjct: 76  RMFKSACEGFKVYPATVDQVSAGTSYFQCLYVSLRHTVEVMNAAGHFMAHFKPFTGKFYV 135

Query: 136 PHLSLLYADLSEEKKKKAEEIADKLNEGIHGLSFPVTRLALYKTDIEDLTLKSWEKIAEH 195
           PH+S+LY DL+E +KKKA E A  L+  + GL+F + R+AL+ TD +   + SW K+ EH
Sbjct: 136 PHMSILYGDLTEREKKKALEKAYTLDSSLDGLNFKINRVALWITDAD---VGSWVKVDEH 195

Query: 196 DLPS 198
            L S
Sbjct: 196 TLIS 196

The following BLAST results are available for this feature:

BLAST of Sed0025293 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882567.1	1.0e-78	72.82	cyclic phosphodiesterase-like [Benincasa hispida]	[more]
KAG6594517.1	5.0e-78	72.16	Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6581386.1	6.5e-78	73.33	Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022926309.1	6.5e-78	71.79	cyclic phosphodiesterase-like [Cucurbita moschata]	[more]
XP_022978766.1	8.5e-78	73.85	cyclic phosphodiesterase-like [Cucurbita maxima]	[more]

BLAST of Sed0025293 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04147	6.6e-49	54.76	Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1	[more]

BLAST of Sed0025293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEQ8	3.2e-78	71.79	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433501 PE=4...	[more]
A0A6J1INY2	4.1e-78	73.85	cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 S...	[more]
A0A6J1KNB2	7.8e-77	70.77	cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111496852 PE=4 S...	[more]
A0A6J1EGC1	1.7e-76	73.33	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4...	[more]
A0A1S3AYZ1	4.4e-72	67.18	cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1	[more]

BLAST of Sed0025293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18930.1	4.7e-50	54.76	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT4G18940.1	2.9e-39	42.39	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..161
None	No IPR available	GENE3D	3.90.1140.10	Cyclic phosphodiesterase	coord: 18..197 e-value: 9.6E-53 score: 180.5
None	No IPR available	PANTHER	PTHR28141:SF4	CYCLIC PHOSPHODIESTERASE-LIKE	coord: 20..195
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PFAM	PF07823	CPDase	coord: 26..161 e-value: 5.3E-13 score: 49.1
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PIRSF	PIRSF017903	CPDase_plant	coord: 2..197 e-value: 1.7E-64 score: 215.0
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PANTHER	PTHR28141	2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE	coord: 20..195
IPR009097	Cyclic phosphodiesterase	SUPERFAMILY	55144	LigT-like	coord: 20..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025293.1	Sed0025293.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009187	cyclic nucleotide metabolic process
molecular_function	GO:0004113	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
molecular_function	GO:0004112	cyclic-nucleotide phosphodiesterase activity