Sed0025236 (gene) Chayote v1

Overview


Name	Sed0025236
Type	gene
Organism	Sechium edule (Chayote v1)
Description	sodium/potassium/calcium exchanger 1-like
Location	LG04: 46055958 .. 46056751 (+)
RNA-Seq Expression	Sed0025236
Synteny	Sed0025236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGATCCTTCAAAAAAGTCCCAACATTTTTCAAAAAAAAAAAAAAAAAAGTTTCAATTTTTGTGAAAAATTTGAAGAACCCAATTGACCCAATTGGCCAAAATCATCAAATCTTCAATCAAATTCTTCAAATATTTTAGCAAATTTCCACAATGAAGCTTGTGATCTCAGCTACTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTCCTCCCATTCCTCCACTCATTGAACCTTTATATCTCTGCAACAATCCACAAGAACTATATGTTCTTGCTCTGCAATGGCATCCTCGTCTTCGTTGTTCGAAATTCCGGTCTCATCGGCAACTCCCGCGACGAACCGAGCCGGGGAAGTGGCAGGGGAGATGAAGCTCAAGGGGCTGCAATGGGGGCTGGCAGCAGAGAAATTGAAAGCAAAGTTGAAAATGGGTTGATTGAAAAAGAAGAAGAAATTGAAAGATTGATTATAGAGGATGAAGAAGAAGAGAGATTTAATTTTTATGATGAAGATGAAGAAGAAGAAGAAGAAGAAGTTGGGGCATTGAGCACAGAGGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGCTGGAATTAAATTTGAATCACAGCAAGTGCTTGTTTTGTAATTTGTAACTAAGAATTTATTGAACAAAATTTATGACTTGTAATTTTTAGTCTCTATTGGGTATAGAAATAATTTTATCTTTTAAATTTTGGTGGGAGGTGTTGTTTTCATATTGGCAAGATTTTCATGAATTCTCATGATATTAATTAATATAAAC

mRNA sequence

CAAGATCCTTCAAAAAAGTCCCAACATTTTTCAAAAAAAAAAAAAAAAAAGTTTCAATTTTTGTGAAAAATTTGAAGAACCCAATTGACCCAATTGGCCAAAATCATCAAATCTTCAATCAAATTCTTCAAATATTTTAGCAAATTTCCACAATGAAGCTTGTGATCTCAGCTACTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTCCTCCCATTCCTCCACTCATTGAACCTTTATATCTCTGCAACAATCCACAAGAACTATATGTTCTTGCTCTGCAATGGCATCCTCGTCTTCGTTGTTCGAAATTCCGGTCTCATCGGCAACTCCCGCGACGAACCGAGCCGGGGAAGTGGCAGGGGAGATGAAGCTCAAGGGGCTGCAATGGGGGCTGGCAGCAGAGAAATTGAAAGCAAAGTTGAAAATGGGTTGATTGAAAAAGAAGAAGAAATTGAAAGATTGATTATAGAGGATGAAGAAGAAGAGAGATTTAATTTTTATGATGAAGATGAAGAAGAAGAAGAAGAAGAAGTTGGGGCATTGAGCACAGAGGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGCTGGAATTAAATTTGAATCACAGCAAGTGCTTGTTTTGTAATTTGTAACTAAGAATTTATTGAACAAAATTTATGACTTGTAATTTTTAGTCTCTATTGGGTATAGAAATAATTTTATCTTTTAAATTTTGGTGGGAGGTGTTGTTTTCATATTGGCAAGATTTTCATGAATTCTCATGATATTAATTAATATAAAC

Coding sequence (CDS)

ATGAAGCTTGTGATCTCAGCTACTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTCCTCCCATTCCTCCACTCATTGAACCTTTATATCTCTGCAACAATCCACAAGAACTATATGTTCTTGCTCTGCAATGGCATCCTCGTCTTCGTTGTTCGAAATTCCGGTCTCATCGGCAACTCCCGCGACGAACCGAGCCGGGGAAGTGGCAGGGGAGATGAAGCTCAAGGGGCTGCAATGGGGGCTGGCAGCAGAGAAATTGAAAGCAAAGTTGAAAATGGGTTGATTGAAAAAGAAGAAGAAATTGAAAGATTGATTATAGAGGATGAAGAAGAAGAGAGATTTAATTTTTATGATGAAGATGAAGAAGAAGAAGAAGAAGAAGTTGGGGCATTGAGCACAGAGGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAATGAAGGCTGGAATTAAATTTGAATCACAGCAAGTGCTTGTTTTGTAA

Protein sequence

MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGDEAQGAAMGAGSREIESKVENGLIEKEEEIERLIIEDEEEERFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL

Homology

[Close]

BLAST of Sed0025236 vs. NCBI nr
Match: XP_038888415.1 (histone H3.v1-like [Benincasa hispida])

HSP 1 Score: 204.5 bits (519), Expect = 6.8e-49
Identity = 130/168 (77.38%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MKLVISA+LLSAMVFYSSLLPFLHSLNLYIS TIHKNYMFLLCNG+LVF+VRNSGLIGNS
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISTTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60

Query: 61  RDEPSRGSGRGDEAQGAAMGAGSREIESKV------ENGLIEKEEEIERLIIEDE-EEER 120
            DE    SGR +EA GAAM  G+R+IESKV      ENGLI KEEE E LI +DE EEER
Sbjct: 61  SDEQ---SGR-NEALGAAMADGNRKIESKVEIEEERENGLIAKEEENEELITKDEDEEER 120

Query: 121 FNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL 162
           FNFY+E+EEEEEEE+     EELNKKCEEFIRKMK GIKFESQQV VL
Sbjct: 121 FNFYEEEEEEEEEEI----DEELNKKCEEFIRKMKEGIKFESQQVFVL 160

[Close]

BLAST of Sed0025236 vs. NCBI nr
Match: XP_022928452.1 (uncharacterized protein LOC111435260 [Cucurbita moschata])

HSP 1 Score: 191.0 bits (484), Expect = 7.7e-45
Identity = 117/167 (70.06%), Postives = 132/167 (79.04%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  RDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGLIEKEEEIERLIIEDEEEERF 120
            D  S G  RG EA  A+M  GS +IESKVE      NGLI+K+EE ER I+ED+     
Sbjct: 61  GDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDD----- 120

Query: 121 NFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL 162
              D D++++EEEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 121 ---DNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

[Close]

BLAST of Sed0025236 vs. NCBI nr
Match: XP_023530308.1 (uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.1 bits (479), Expect = 2.9e-44
Identity = 116/167 (69.46%), Postives = 130/167 (77.84%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  RDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGLIEKEEEIERLIIEDEEEERF 120
            D  S G  RG EA  AAM  GS +IESKVE      NGLI+K+EE ER I+ED      
Sbjct: 61  GDRHSGGDSRGAEALEAAMADGSSKIESKVEDREERGNGLIQKDEESERSIVED------ 120

Query: 121 NFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL 162
                D+++++EEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 121 -----DDDDDDEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 156

[Close]

BLAST of Sed0025236 vs. NCBI nr
Match: KAG7022808.1 (hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.7 bits (478), Expect = 3.8e-44
Identity = 116/167 (69.46%), Postives = 130/167 (77.84%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  RDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGLIEKEEEIERLIIEDEEEERF 120
            D  S G  RG EA  A+M  GS +IESKVE      NGLI+K+EE ER I+ED      
Sbjct: 61  GDRHSSGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIMED------ 120

Query: 121 NFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL 162
                D++++EEEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 121 -----DDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 156

[Close]

BLAST of Sed0025236 vs. NCBI nr
Match: KAG6589100.1 (hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.5 bits (467), Expect = 7.2e-43
Identity = 114/161 (70.81%), Postives = 128/161 (79.50%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  RDEPSRGSGRGDEAQGAAMGAGSREIESKVENGLIEKEEEIERLIIEDEEEERFNFYDED 120
            D  S G  RG EA  A+M  GS +IESKVE    ++EE    LI +DEE ER    D+D
Sbjct: 61  GDRHSGGDSRGAEALEASMADGSSKIESKVE----DREERGNGLIQKDEESERSIMEDDD 120

Query: 121 EEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL 162
            +++EEEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 121 NDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 157

[Close]

BLAST of Sed0025236 vs. ExPASy TrEMBL
Match: A0A6J1EJY9 (uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC111435260 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.7e-45
Identity = 117/167 (70.06%), Postives = 132/167 (79.04%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MKL+ISA+LLSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNG+LVF+VRNSGLI  S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  RDEPSRGSGRGDEAQGAAMGAGSREIESKVE------NGLIEKEEEIERLIIEDEEEERF 120
            D  S G  RG EA  A+M  GS +IESKVE      NGLI+K+EE ER I+ED+     
Sbjct: 61  GDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDD----- 120

Query: 121 NFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL 162
              D D++++EEEVGALS EELNKKCEEFIRKMKAGIK ESQQ+LVL
Sbjct: 121 ---DNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

[Close]

BLAST of Sed0025236 vs. ExPASy TrEMBL
Match: A0A0A0K349 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.0e-42
Identity = 118/169 (69.82%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MKLVISA+LLSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNG+LVF+VRNSGLIGN+
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  RDEPSRGSGRGDEAQGAA-MGAGSREIESKVE------NGLIEKEEEIERLIIEDE-EEE 120
            DE S     G+EA GAA M  G+R+IESKVE      NGL+  E++IE LI ++E EEE
Sbjct: 61  SDERS----SGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEE 120

Query: 121 RFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL 162
           RF  Y+E+EEEE +       EELNKKCEEFIRKMKAGIKFESQQ+ +L
Sbjct: 121 RFMSYEEEEEEEID-------EELNKKCEEFIRKMKAGIKFESQQLFIL 158

[Close]

BLAST of Sed0025236 vs. ExPASy TrEMBL
Match: A0A6J1I0H9 (sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468328 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.6e-40
Identity = 112/169 (66.27%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MKLVISA++LSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNG+LVF+VRNSGLI +S
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  RDEPSRGSG-RGDEAQGAAMGAGSREIESKVENG-------LIEKEEEIERLIIEDEEEE 120
             E   G G R  EA GAAM   +  IE KVE+G       + E+E+E ERL+ E+E+++
Sbjct: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120

Query: 121 RFNFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLVL 162
                 E+E+ E EEVGALS EEL+KK EEFIRKMKAGIK ESQQVL+L
Sbjct: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 169

[Close]

BLAST of Sed0025236 vs. ExPASy TrEMBL
Match: A0A6J1C4P4 (ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.9e-37
Identity = 110/166 (66.27%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 1   MKLVISATLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNS 60
           MK++ISA+LLSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNG+LVF+VRNSGLIG  
Sbjct: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIG-- 60

Query: 61  RDEPSRGSGRGDEAQGAAMGAGSREIESKV------ENGLIEKEEEIERLIIEDEEEERF 120
                 GSG   E QG     G  ++ESKV      ENGL+ ++EE E+LI EDEE    
Sbjct: 61  ------GSG---EEQG-----GGGKVESKVEDGEERENGLVAEQEESEKLITEDEEH--- 120

Query: 121 NFYDEDEEEEEEEVGALSTEELNKKCEEFIRKMKAGIKFESQQVLV 161
               E+EEEEEEE G LS EELN+KCEEFIRKMKA IKFE QQVLV
Sbjct: 121 ----EEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 143

[Close]

BLAST of Sed0025236 vs. ExPASy TrEMBL
Match: A0A1S3CG16 (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 104/162 (64.20%), Postives = 120/162 (74.07%), Query Frame = 0


Query: 13  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSRDEPSRGSGRGD 72
           MVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNG+LVF+VRNSGLIGN+ +E    S R +
Sbjct: 1   MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQ---SSRNE 60

Query: 73  EAQGAAMGAGSREIESKVE--------NGLIEKEEEIERLIIEDE-EEERFNFYDEDEEE 132
                 M  G+R+IESKVE        NGL+  EE+ E LI ++E EEERF  Y+E+EEE
Sbjct: 61  ALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEE 120

Query: 133 EEEEVGALS----TEELNKKCEEFIRKMKAGIKFESQQVLVL 162
           EEEE          EELNKKCEEFIRKMKAGIKFESQQ+ +L
Sbjct: 121 EEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159

[Close]

BLAST of Sed0025236 vs. TAIR 10
Match: AT2G04515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04495.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-07
Identity = 58/183 (31.69%), Postives = 90/183 (49.18%), Query Frame = 0


Query: 2   KLVISATLLSAMVFYSSLLPF----LHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLI 61
           K++  A++ S ++ YSSL+      LH L +Y S  + K YMFLLCNGI+ F++   G  
Sbjct: 18  KIIAFASIFSFILSYSSLISSLQQRLHLLAMY-SNLVDKKYMFLLCNGIVGFIL---GSF 77

Query: 62  GNSRDEPSRGSGRGDEAQGAAMGAGS------REIESKVENGLIEKEEEIERLIIEDEEE 121
             + D  S G       Q   +G          ++ + +E   + KEEE   ++  +EEE
Sbjct: 78  HGNSDSLSHGKAINIVEQTKEVGIKDLKETKVNKVVALLEESNVSKEEEGRVVLSREEEE 137

Query: 122 ERFNFYDEDE----------------EEEEEEVGALSTEELNKKCEEFIRKMKAGIKFES 159
           E      EDE                +++      LS+E+LNKKCE+FIRKMKA I++  
Sbjct: 138 EVALVVKEDEGILVQDLSITRLDDHDDDDAINDSLLSSEDLNKKCEDFIRKMKAEIRYGK 196

[Close]

BLAST of Sed0025236 vs. TAIR 10
Match: AT2G04495.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 6.8e-07
Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = 0


Query: 2   KLVISATLLSAMVFYSSLLPF----LHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLI 61
           K++  A++ S ++ YSSL+      LH L++Y S  + K YMFLLCNGI+ F++   G  
Sbjct: 18  KIIALASIFSFILSYSSLISSLQQRLHLLSMY-SNLVDKKYMFLLCNGIVGFIL---GSF 77

Query: 62  GNSRDEPSRGSGRGDEAQGAAMGAGS------REIESKVENGLIEKEEEIE----RLI-- 121
             + +  S+G       Q   +G         +++ + +E   + KEEE E    R++  
Sbjct: 78  HGNSESLSQGKAINIIEQTKEVGIKDLKETKLKKVVALLEEKSVSKEEEEEEEGGRVVLF 137

Query: 122 --IEDEEEERFNFYDE------------DEEEEEEEV--GALSTEELNKKCEEFIRKMKA 159
             IE+EE       DE            D+  ++EE+    LS E+LNKKCE+FIRKMKA
Sbjct: 138 RGIEEEEVSLVVEVDEEILVQDLAIIRVDDHHDDEEINDSLLSVEDLNKKCEDFIRKMKA 197

[Close]

BLAST of Sed0025236 vs. TAIR 10
Match: AT3G13130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 4.9e-05
Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 0


Query: 8   TLLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGILVFVVRNSGLIGNSR------ 67
           +LL++  FY  L  F+  L   ++  + KNYMFLLCNG++V V + SGL+ +S+      
Sbjct: 24  SLLTSHDFY--LYRFMIQL---VTHAVDKNYMFLLCNGLVVVVAKCSGLVASSKPIEKIW 83

Query: 68  DEPSRGSGRGDEAQGAAMGAGSREIESKVENGL---------IEKEEEIERLIIEDEEEE 127
               +    GD      +     E+E K ++G+         +  EE+ +    ED EEE
Sbjct: 84  SNTDKTFDYGDFESYTTI----LELEYKSDHGIGTESFLAEEVTVEEDTKHQETEDNEEE 143

Query: 128 RFN---FYDED------------EEEEEEEVGALST--EELNKKCEEFIRKMKAGIKFES 162
             +     D D             EEEE  VG +++  EE+NKK +EFIRKMK  ++ E+
Sbjct: 144 DDDDNTLADNDGEEECGLRGGSINEEEEGNVGVMTSTEEEMNKKFDEFIRKMKEELRIEA 200

The following BLAST results are available for this feature:

BLAST of Sed0025236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888415.1	6.8e-49	77.38	histone H3.v1-like [Benincasa hispida]	[more]
XP_022928452.1	7.7e-45	70.06	uncharacterized protein LOC111435260 [Cucurbita moschata]	[more]
XP_023530308.1	2.9e-44	69.46	uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]	[more]
KAG7022808.1	3.8e-44	69.46	hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589100.1	7.2e-43	70.81	hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0025236 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0025236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJY9	3.7e-45	70.06	uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A0A0K349	1.0e-42	69.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1	[more]
A0A6J1I0H9	1.6e-40	66.27	sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1C4P4	4.9e-37	66.27	ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 P...	[more]
A0A1S3CG16	1.1e-36	64.20	gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1	[more]

BLAST of Sed0025236 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04515.1	4.0e-07	31.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G04495.1	6.8e-07	32.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13130.1	4.9e-05	31.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..89
None	No IPR available	PANTHER	PTHR34947	TRANSMEMBRANE PROTEIN	coord: 1..160
None	No IPR available	PANTHER	PTHR34947:SF3	TRANSMEMBRANE PROTEIN	coord: 1..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025236.1	Sed0025236.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane