Homology
BLAST of Sed0025228 vs. NCBI nr
Match:
XP_023547019.1 (pentatricopeptide repeat-containing protein At3g49710 [Cucurbita pepo subsp. pepo] >XP_023547027.1 pentatricopeptide repeat-containing protein At3g49710 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1330.5 bits (3442), Expect = 0.0e+00
Identity = 639/712 (89.75%), Postives = 674/712 (94.66%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQSFRH+LKTCIA+R+LRTGK LHALYIKSF+P STY+SNHF+LLYSKCRRLSAARRVFD
Sbjct: 8 LQSFRHVLKTCIAQRDLRTGKFLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
QTQ+CN+FSFN LI+AYAKESFVEVAR+LFDKM QPD +SYNTLIAAYAQR D++ AFQL
Sbjct: 68 QTQECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPISYNTLIAAYAQRGDVQSAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
F+EMREA LDMDGFTLSG+ITACGD VALI QLHALSV AGFDCYASVGNAL+T YSKNG
Sbjct: 128 FVEMREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNG 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FLN AQRIFY MG D+DEVSWNSMVVAYMQHREGSKAL LY+EMT RGLVVDMFTLASVL
Sbjct: 188 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDLSGGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGG ML CRKVFDEICKPDL
Sbjct: 248 TAFTNVQDLSGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGSMLSCRKVFDEICKPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSLFEE SDEALECFR++QG GH PDDCSLVCVISAC+NMSSPSQGRQVHA
Sbjct: 308 VLWNTMISGYSLFEEFSDEALECFRRLQGVGHLPDDCSLVCVISACANMSSPSQGRQVHA 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
L FKLDIPSNRISVNNAL+AMYSKCGNLRDARRLFDTMPEHN VSFNSMIAGYAQHGMGF
Sbjct: 368 LTFKLDIPSNRISVNNALIAMYSKCGNLRDARRLFDTMPEHNTVSFNSMIAGYAQHGMGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL+LFQRMLEMGFTPTNITFISVLAACAHTGRV++GK YFNMMKQKFGIEPEAEHFSCL
Sbjct: 428 QSLNLFQRMLEMGFTPTNITFISVLAACAHTGRVQDGKIYFNMMKQKFGIEPEAEHFSCL 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLLGRAGK EAERLI TIPFNPGSIFWSALLGACRTHGNMELA KAANHLLQLEPSNA
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFNPGSIFWSALLGACRTHGNMELAAKAANHLLQLEPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIYADNGRWEDVA+VRKLMRDRG+KKKPGCSWIEV+RR HIFVAED HP+I
Sbjct: 548 APYVMLANIYADNGRWEDVASVRKLMRDRGVKKKPGCSWIEVDRRTHIFVAEDTSHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREG 662
KIHEYLEEM+RKIKK GY PDVRS S+G DGIR+REEELRLGHHSEKLAVAFGLMC+REG
Sbjct: 608 KIHEYLEEMMRKIKKAGYVPDVRSISIGTDGIRKREEELRLGHHSEKLAVAFGLMCTREG 667
Query: 663 EPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
EPILVVKNLRICVDCHNAIK+ISAVVKREITVRD HRFHCFKDGQCSCGDYW
Sbjct: 668 EPILVVKNLRICVDCHNAIKFISAVVKREITVRDTHRFHCFKDGQCSCGDYW 719
BLAST of Sed0025228 vs. NCBI nr
Match:
KAG6600674.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1329.7 bits (3440), Expect = 0.0e+00
Identity = 639/712 (89.75%), Postives = 674/712 (94.66%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQSFRH+LKTCIA+R+LRTGK+LHALYIKSF+P STY+SNHF+LLYSKCRRLSAARRVFD
Sbjct: 8 LQSFRHVLKTCIAQRDLRTGKSLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
QTQ+CN+FSFN LI+AYAKESFVEVAR+LFDKM QPD VSYNTLIAAYAQR D+E AFQL
Sbjct: 68 QTQECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
F+EMREA LDMDGFTLSG+ITACGD VALI QLHALSV AGFDCYASVGNAL+T YSKNG
Sbjct: 128 FVEMREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNG 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FLN AQRIFY MG D+DEVSWNSMVVAYMQHREGSKAL LY+EMT RGLVVDMFTLASVL
Sbjct: 188 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDLSGGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGG ML CRKVFDEICKPDL
Sbjct: 248 TAFTNVQDLSGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGSMLSCRKVFDEICKPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSLFEE SDEALECFR++QG GH PDDCSLVCVISAC+NMSSPSQGRQVHA
Sbjct: 308 VLWNTMISGYSLFEEFSDEALECFRRLQGVGHLPDDCSLVCVISACANMSSPSQGRQVHA 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
L FKLDIPSNRISVNNAL+AMYSKCGNLRDARRLFDTMPEHN VSFNSMIAGYAQHGMGF
Sbjct: 368 LTFKLDIPSNRISVNNALIAMYSKCGNLRDARRLFDTMPEHNTVSFNSMIAGYAQHGMGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL+LFQRML+MGFTPTNITFISVLAACAHTGRV++GK YFNMMKQKFGIEPEAEHFSCL
Sbjct: 428 QSLNLFQRMLDMGFTPTNITFISVLAACAHTGRVQDGKIYFNMMKQKFGIEPEAEHFSCL 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLLGRAGK EAERLI TIPFNPGSIFWSALLGACRTHGNMELA KAANHLLQLEPSNA
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFNPGSIFWSALLGACRTHGNMELAAKAANHLLQLEPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIYADNGRWEDVA+VRKLMRDRG+KKKPGCSWIEV+RR HIFVAED HP+I
Sbjct: 548 APYVMLANIYADNGRWEDVASVRKLMRDRGVKKKPGCSWIEVDRRTHIFVAEDTSHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREG 662
KIHEYLEEM+RKIKK GY PDVRS S+G DGIR+REEELRLGHHSEKLAVAFGLMC+ EG
Sbjct: 608 KIHEYLEEMMRKIKKAGYVPDVRSISIGTDGIRKREEELRLGHHSEKLAVAFGLMCTSEG 667
Query: 663 EPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
EPILVVKNLRICVDCHNAIK+ISAVVKREITVRD HRFHCFKDGQCSCGDYW
Sbjct: 668 EPILVVKNLRICVDCHNAIKFISAVVKREITVRDTHRFHCFKDGQCSCGDYW 719
BLAST of Sed0025228 vs. NCBI nr
Match:
KAG7031312.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1326.2 bits (3431), Expect = 0.0e+00
Identity = 637/710 (89.72%), Postives = 672/710 (94.65%), Query Frame = 0
Query: 5 SFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFDQT 64
SFRH+LKTCIA+R+LRTGK+LHALYIKSF+P STY+SNHF+LLYSKCRRLSAARRVFDQT
Sbjct: 248 SFRHVLKTCIAQRDLRTGKSLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFDQT 307
Query: 65 QDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLFL 124
Q+CN+FSFN LI+AYAKESFVEVAR+LFDKM QPD VSYNTLIAAYAQR D+E AFQLF+
Sbjct: 308 QECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQLFV 367
Query: 125 EMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNGFL 184
EMREA LDMDGFTLSG+ITACGD VALI QLHALSV AGFDCYASVGNAL+T YSKNGFL
Sbjct: 368 EMREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNGFL 427
Query: 185 NGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVLTA 244
N AQRIFY MG D+DEVSWNSMVVAYMQHREGSKAL LY+EMT RGLVVDMFTLASVLTA
Sbjct: 428 NEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVLTA 487
Query: 245 FTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDLVL 304
FTNVQDLSGGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGG ML CRKVFDEICKPDLVL
Sbjct: 488 FTNVQDLSGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGSMLSCRKVFDEICKPDLVL 547
Query: 305 WNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHALA 364
WNTMISGYSLFEE SDEALECFR++QG GH PDDCSLVCVISAC+NMSSPSQGRQVHAL
Sbjct: 548 WNTMISGYSLFEEFSDEALECFRRLQGVGHLPDDCSLVCVISACANMSSPSQGRQVHALT 607
Query: 365 FKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGFQS 424
FKLDIPSNRISVNNAL+AMYSKCGNLRDARRLFDTMPEHN VSFNSMIAGYAQHGMGFQS
Sbjct: 608 FKLDIPSNRISVNNALIAMYSKCGNLRDARRLFDTMPEHNTVSFNSMIAGYAQHGMGFQS 667
Query: 425 LDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCLID 484
L+LFQRML+MGFTPTNITFISVLAACAHTGRV++GK YFNMMKQKFGIEPEAEHFSCLID
Sbjct: 668 LNLFQRMLDMGFTPTNITFISVLAACAHTGRVQDGKIYFNMMKQKFGIEPEAEHFSCLID 727
Query: 485 LLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNAAP 544
LLGRAGK EAERLI TIPFNPGSIFWSALLGACRTHGNMELA KAANHLLQLEPSNAAP
Sbjct: 728 LLGRAGKLSEAERLIETIPFNPGSIFWSALLGACRTHGNMELAAKAANHLLQLEPSNAAP 787
Query: 545 YVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLITKI 604
YVMLANIYADNGRWEDVA+VRKLMRDRG+KKKPGCSWIEV+RR HIFVAED HP+I KI
Sbjct: 788 YVMLANIYADNGRWEDVASVRKLMRDRGVKKKPGCSWIEVDRRTHIFVAEDTSHPMIKKI 847
Query: 605 HEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREGEP 664
HEYLEEM+RKIKK GY PDVRS S+G DGIR+REEELRLGHHSEKLAVAFGLMC+ EGEP
Sbjct: 848 HEYLEEMMRKIKKAGYVPDVRSISIGTDGIRKREEELRLGHHSEKLAVAFGLMCTSEGEP 907
Query: 665 ILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
ILVVKNLRICVDCHNAIK+ISAVVKREITVRD HRFHCFKDGQCSCGDYW
Sbjct: 908 ILVVKNLRICVDCHNAIKFISAVVKREITVRDTHRFHCFKDGQCSCGDYW 957
BLAST of Sed0025228 vs. NCBI nr
Match:
XP_022943237.1 (pentatricopeptide repeat-containing protein At3g49710 [Cucurbita moschata])
HSP 1 Score: 1325.5 bits (3429), Expect = 0.0e+00
Identity = 637/712 (89.47%), Postives = 673/712 (94.52%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQSFRH+LKTCIA+R+LRTG +LHALYIKSF+P STY SNHF+LLYSKCRRLSAARRVFD
Sbjct: 8 LQSFRHVLKTCIAQRDLRTGMSLHALYIKSFVPASTYFSNHFILLYSKCRRLSAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
QTQ+CN+FSFN LI+AYAKESFVEVAR+LFDKM QPD VSYNTLIAAYAQR D+E AFQL
Sbjct: 68 QTQECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
F+EMREA LDMDGFTLSG+ITACGD VALI QLHALSV AGFDCYASVGNAL+T YSKNG
Sbjct: 128 FVEMREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNG 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FLN AQRIFY MG D+DEVSWNSMVVAYMQHREGSKAL LY+EMT RGLVVDMFTLASVL
Sbjct: 188 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDLSGGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGG ML CRKVFDEICKPDL
Sbjct: 248 TAFTNVQDLSGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGSMLSCRKVFDEICKPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSLFEE SDEALECFR++QG GH PDDCSLVCVISAC+NMSSPSQGRQVHA
Sbjct: 308 VLWNTMISGYSLFEEFSDEALECFRRLQGVGHLPDDCSLVCVISACANMSSPSQGRQVHA 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
L FKLDIPSNRISVNNAL+AMYSKCGNLRDARRLFDTMPEHN VSFNS+IAGYAQHGMGF
Sbjct: 368 LTFKLDIPSNRISVNNALIAMYSKCGNLRDARRLFDTMPEHNTVSFNSIIAGYAQHGMGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL+LFQRML+MGFTPTNITFISVLAACAHTGRV++GK YFNMMKQKFGIEPEAEHFSCL
Sbjct: 428 QSLNLFQRMLDMGFTPTNITFISVLAACAHTGRVQDGKIYFNMMKQKFGIEPEAEHFSCL 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLLGRAGK EAERLI TIPFNPGSIFWSALLGACRTHGNMELA KAANHLLQLEPSNA
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFNPGSIFWSALLGACRTHGNMELAAKAANHLLQLEPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIYADNGRWEDVA+VRKLMRDRG+KKKPGCSWIEV+RR HIFVAED HP+I
Sbjct: 548 APYVMLANIYADNGRWEDVASVRKLMRDRGVKKKPGCSWIEVDRRTHIFVAEDTSHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREG 662
KIHEYLEEM+RKIKK GY PDVRS S+G +GIR+REEELRLGHHSEKLAVAFGLMC+REG
Sbjct: 608 KIHEYLEEMMRKIKKAGYVPDVRSISIGTNGIRKREEELRLGHHSEKLAVAFGLMCTREG 667
Query: 663 EPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
EPILVVKNLRICVDCHNAIK+ISAVVKREITVRD HRFHCFKDGQCSCGDYW
Sbjct: 668 EPILVVKNLRICVDCHNAIKFISAVVKREITVRDTHRFHCFKDGQCSCGDYW 719
BLAST of Sed0025228 vs. NCBI nr
Match:
XP_023000646.1 (pentatricopeptide repeat-containing protein At3g49710-like [Cucurbita maxima])
HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 637/712 (89.47%), Postives = 671/712 (94.24%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQSFRH+LKTCIA+R++RTGK+LHALYIKSF+P STY+SNHF+LLYSKCRRLSAARRVFD
Sbjct: 8 LQSFRHVLKTCIAQRDVRTGKSLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
QTQ+CN+FSFN LISAYAKESFVEVAR+LFDKM QPD VSYNTLIAAYAQR D+E AFQL
Sbjct: 68 QTQECNIFSFNALISAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
F+EMREA LDMDGFTLSG+ITACGD VALI QLHALSVVAGFDCY SVGNAL+T YSKN
Sbjct: 128 FVEMREALLDMDGFTLSGIITACGDDVALIRQLHALSVVAGFDCYVSVGNALITYYSKNR 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FLN AQRIFY MG D+DEVSWNSMVVAYMQHREGSKALELY+EMT RGLVVDMFTLASVL
Sbjct: 188 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALELYMEMTLRGLVVDMFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDLSGGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGG ML CRKVFDEICKPDL
Sbjct: 248 TAFTNVQDLSGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGSMLSCRKVFDEICKPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSLFEE SDEALECFR++QG GH PDDCSLVCVISAC+NMSSPSQGRQVHA
Sbjct: 308 VLWNTMISGYSLFEEFSDEALECFRRLQGVGHLPDDCSLVCVISACANMSSPSQGRQVHA 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
L FKLDIPSNRISVNNAL+AMYSKCGNLRDARRLFDTMPEHN VSFNSMIAGYAQHGMGF
Sbjct: 368 LTFKLDIPSNRISVNNALIAMYSKCGNLRDARRLFDTMPEHNTVSFNSMIAGYAQHGMGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL+LFQRMLEMGFTPT ITFISVLAACAHTGRV++GK YFNMMKQKFGIEPEAEHFSCL
Sbjct: 428 QSLNLFQRMLEMGFTPTKITFISVLAACAHTGRVQDGKIYFNMMKQKFGIEPEAEHFSCL 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLLGRAGK EAERLI TIPFNPGSI WSALLGACRTHGNMELA KAANHLLQLEPSNA
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFNPGSILWSALLGACRTHGNMELAAKAANHLLQLEPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIYADNGRWEDV +VRKLMRDRG+KKKPGCSWIEV+RR HIFVAED HP+I
Sbjct: 548 APYVMLANIYADNGRWEDVGSVRKLMRDRGVKKKPGCSWIEVDRRTHIFVAEDTSHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREG 662
KIHEYLEEM+RKIKK GY PDVRS S+ DGIR+REEELRLGHHSEKLAVAFGLMC+REG
Sbjct: 608 KIHEYLEEMMRKIKKAGYVPDVRSISIVTDGIRKREEELRLGHHSEKLAVAFGLMCTREG 667
Query: 663 EPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
EPILVVKNLRICVDCHNAIK+ISAVVKREITVRD HRFHCFKDGQCSCGDYW
Sbjct: 668 EPILVVKNLRICVDCHNAIKFISAVVKREITVRDTHRFHCFKDGQCSCGDYW 719
BLAST of Sed0025228 vs. ExPASy Swiss-Prot
Match:
Q9M2Y7 (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H79 PE=2 SV=1)
HSP 1 Score: 935.6 bits (2417), Expect = 3.2e-271
Identity = 452/713 (63.39%), Postives = 554/713 (77.70%), Query Frame = 0
Query: 4 QSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFDQ 63
++FR +L +AER+L TGK+LHALY+KS + +STYLSNHFV LYSKC RLS AR F
Sbjct: 9 KTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS 68
Query: 64 TQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLF 123
T++ NVFS+N ++ AYAK+S + +ARQLFD++PQPD+VSYNTLI+ YA + A LF
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF 128
Query: 124 LEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNGF 183
MR+ ++DGFTLSG+I AC D V LI QLH SV GFD Y+SV NA +T YSK G
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 184 LNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVLT 243
L A +FY M RDEVSWNSM+VAY QH+EG+KAL LY EM +G +DMFTLASVL
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 244 AFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGC--MLDCRKVFDEICKPD 303
A T++ L GG QFH K+IK+G+HQN HVGSGLID YSKCGGC M D KVF EI PD
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 304 LVLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVH 363
LV+WNTMISGYS+ EELS+EA++ FRQMQ GH PDDCS VCV SACSN+SSPSQ +Q+H
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 364 ALAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMG 423
LA K IPSNRISVNNAL+++Y K GNL+DAR +FD MPE N VSFN MI GYAQHG G
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 424 FQSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSC 483
++L L+QRML+ G P ITF++VL+ACAH G+V+ G+ YFN MK+ F IEPEAEH+SC
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC 488
Query: 484 LIDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSN 543
+IDLLGRAGK EAER I +P+ PGS+ W+ALLGACR H NM LA +AAN L+ ++P
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLA 548
Query: 544 AAPYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLI 603
A PYVMLAN+YAD +WE++A+VRK MR + ++KKPGCSWIEV ++ H+FVAED HP+I
Sbjct: 549 ATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608
Query: 604 TKIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSRE 663
+++EYLEEM++K+KKVGY D + A V D + +EE+RLGHHSEKLAVAFGLM +R+
Sbjct: 609 REVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRD 668
Query: 664 GEPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
GE ++VVKNLRIC DCHNAIK++SAV REI VRD RFHCFKDG+CSCGDYW
Sbjct: 669 GEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
BLAST of Sed0025228 vs. ExPASy Swiss-Prot
Match:
Q9CAA8 (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)
HSP 1 Score: 508.4 bits (1308), Expect = 1.3e-142
Identity = 272/740 (36.76%), Postives = 425/740 (57.43%), Query Frame = 0
Query: 10 LKTCI---AERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFDQTQD 69
+K CI A R K +H I++ T+L N+ V Y+ + + ARRVFD+
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 70 CNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLF-LE 129
N+FS+N L+ AY+K + F+K+P D V++N LI Y+ + A + +
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 130 MREAFLDMDGFTLSGV--ITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNGF 189
MR+ ++ TL + +++ HV+L Q+H + GF+ Y VG+ LL Y+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 190 LNGAQRIFYEM-----------------------------GVDRDEVSWNSMVVAYMQHR 249
++ A+++FY + G+++D VSW +M+ Q+
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 250 EGSKALELYLEMTARGLVVDMFTLASVLTAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGS 309
+A+E + EM +GL +D + SVL A + ++ G Q HA +I++ + + +VGS
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 310 GLIDLYSKCGGCMLDCRKVFDEICKPDLVLWNTMISGYSLFEELSDEALECFRQMQGFGH 369
LID+Y KC C+ + VFD + + ++V W M+ GY ++EA++ F MQ G
Sbjct: 310 ALIDMYCKC-KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR-AEEAVKIFLDMQRSGI 369
Query: 370 SPDDCSLVCVISACSNMSSPSQGRQVHALAFKLDIPSNRISVNNALVAMYSKCGNLRDAR 429
PD +L ISAC+N+SS +G Q H A + + ++V+N+LV +Y KCG++ D+
Sbjct: 370 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVTLYGKCGDIDDST 429
Query: 430 RLFDTMPEHNVVSFNSMIAGYAQHGMGFQSLDLFQRMLEMGFTPTNITFISVLAACAHTG 489
RLF+ M + VS+ +M++ YAQ G +++ LF +M++ G P +T V++AC+ G
Sbjct: 430 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 489
Query: 490 RVENGKTYFNMMKQKFGIEPEAEHFSCLIDLLGRAGKFGEAERLIATIPFNPGSIFWSAL 549
VE G+ YF +M ++GI P H+SC+IDL R+G+ EA R I +PF P +I W+ L
Sbjct: 490 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 549
Query: 550 LGACRTHGNMELAVKAANHLLQLEPSNAAPYVMLANIYADNGRWEDVATVRKLMRDRGMK 609
L ACR GN+E+ AA L++L+P + A Y +L++IYA G+W+ VA +R+ MR++ +K
Sbjct: 550 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 609
Query: 610 KKPGCSWIEVNRRIHIFVAEDVFHPLITKIHEYLEEMVRKIKKVGYSPDVRSASVGGDGI 669
K+PG SWI+ ++H F A+D P + +I+ LEE+ KI GY PD S +
Sbjct: 610 KEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPD---TSFVHHDV 669
Query: 670 RQREEELRLGHHSEKLAVAFGLMCSREGEPILVVKNLRICVDCHNAIKYISAVVKREITV 715
+ + L +HSE+LA+AFGL+ G+PI V KNLR+CVDCHNA K+IS+V REI V
Sbjct: 670 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 729
BLAST of Sed0025228 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 484.6 bits (1246), Expect = 2.0e-135
Identity = 286/780 (36.67%), Postives = 428/780 (54.87%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLR-TGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVF 62
L+ ++L+ + + N R T + +H IKS + S YL N+ + +YSK AR++F
Sbjct: 13 LELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLF 72
Query: 63 DQTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQ 122
D+ FS+NT++SAY+K ++ + FD++PQ DSVS+ T+I Y A +
Sbjct: 73 DEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIR 132
Query: 123 LFLEMREAFLDMDGFTLSGVI--TACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYS 182
+ +M + ++ FTL+ V+ A + ++H+ V G SV N+LL Y+
Sbjct: 133 VMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYA 192
Query: 183 KNGFLNGAQRIF------------------------------YEMGVDRDEVSWNSMVVA 242
K G A+ +F +E +RD V+WNSM+
Sbjct: 193 KCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISG 252
Query: 243 YMQHREGSKALELYLEMTARGLV-VDMFTLASVLTAFTNVQDLSGGLQFHAKMIKSGYHQ 302
+ Q +AL+++ +M L+ D FTLASVL+A N++ L G Q H+ ++ +G+
Sbjct: 253 FNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI 312
Query: 303 NCHVGSGLIDLYSKCGGC--------------------------------MLDCRKVFDE 362
+ V + LI +YS+CGG M + +F
Sbjct: 313 SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVS 372
Query: 363 ICKPDLVLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQ 422
+ D+V W MI GY EA+ FR M G G P+ +L ++S S+++S S
Sbjct: 373 LKDRDVVAWTAMIVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSH 432
Query: 423 GRQVHALAFKL-DIPSNRISVNNALVAMYSKCGNLRDARRLFDTMP-EHNVVSFNSMIAG 482
G+Q+H A K +I S +SV+NAL+ MY+K GN+ A R FD + E + VS+ SMI
Sbjct: 433 GKQIHGSAVKSGEIYS--VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 492
Query: 483 YAQHGMGFQSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEP 542
AQHG ++L+LF+ ML G P +IT++ V +AC H G V G+ YF+MMK I P
Sbjct: 493 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP 552
Query: 543 EAEHFSCLIDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHL 602
H++C++DL GRAG EA+ I +P P + W +LL ACR H N++L AA L
Sbjct: 553 TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERL 612
Query: 603 LQLEPSNAAPYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAE 662
L LEP N+ Y LAN+Y+ G+WE+ A +RK M+D +KK+ G SWIEV ++H+F E
Sbjct: 613 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 672
Query: 663 DVFHPLITKIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAF 715
D HP +I+ ++++ +IKK+GY PD +ASV D + + +E L HHSEKLA+AF
Sbjct: 673 DGTHPEKNEIYMTMKKIWDEIKKMGYVPD--TASVLHD-LEEEVKEQILRHHSEKLAIAF 732
BLAST of Sed0025228 vs. ExPASy Swiss-Prot
Match:
Q9S7F4 (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)
HSP 1 Score: 480.7 bits (1236), Expect = 2.8e-134
Identity = 263/645 (40.78%), Postives = 389/645 (60.31%), Query Frame = 0
Query: 73 NTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLFLEMREAFLD 132
N L+ +Y + +++A LF+++P+ DSV++NTLI Y + + LFL+MR++
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 133 MDGFTLSGVITA-CGDH-VALIHQLHALSVVAGFDCYASVGNALLTNYSKNGFLNGAQRI 192
FT SGV+ A G H AL QLHALSV GF ASVGN +L YSK+ + + +
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 193 FYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVLTAFTNVQD 252
F EM + D VS+N ++ +Y Q + +L + EM G F A++L+ N+
Sbjct: 308 FDEM-PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 367
Query: 253 LSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDLVLWNTMIS 312
L G Q H + + + HVG+ L+D+Y+KC + +F + + V W +IS
Sbjct: 368 LQMGRQLHCQALLATADSILHVGNSLVDMYAKC-EMFEEAELIFKSLPQRTTVSWTALIS 427
Query: 313 GYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHALAFKLDIP 372
GY + + L L+ F +M+G D + V+ A ++ +S G+Q+HA +
Sbjct: 428 GY-VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 487
Query: 373 SNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGFQSLDLFQR 432
N S + LV MY+KCG+++DA ++F+ MP+ N VS+N++I+ +A +G G ++ F +
Sbjct: 488 ENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 547
Query: 433 MLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCLIDLLGRAG 492
M+E G P +++ + VL AC+H G VE G YF M +GI P+ +H++C++DLLGR G
Sbjct: 548 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 607
Query: 493 KFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEP-SNAAPYVMLA 552
+F EAE+L+ +PF P I WS++L ACR H N LA +AA L +E +AA YV ++
Sbjct: 608 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 667
Query: 553 NIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLITKIHEYLE 612
NIYA G WE V V+K MR+RG+KK P SW+EVN +IH+F + D HP +I +
Sbjct: 668 NIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKIN 727
Query: 613 EMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREGEPILVVK 672
E+ +I++ GY PD ++SV D Q + E L +HSE+LAVAF L+ + EG PI+V+K
Sbjct: 728 ELTAEIEREGYKPD--TSSVVQDVDEQMKIE-SLKYHSERLAVAFALISTPEGCPIVVMK 787
Query: 673 NLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
NLR C DCH AIK IS +VKREITVRD RFH F +G CSCGDYW
Sbjct: 788 NLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
BLAST of Sed0025228 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 471.1 bits (1211), Expect = 2.3e-131
Identity = 257/645 (39.84%), Postives = 379/645 (58.76%), Query Frame = 0
Query: 73 NTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLFLEMREAFLD 132
N+LI+ Y K AR +FD M + D +S+N++IA AQ A LF+++ L
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 133 MDGFTLSGVITACG---DHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNGFLNGAQR 192
D +T++ V+ A + ++L Q+H ++ + V AL+ YS+N + A+
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 193 IFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVLTAFTNVQ 252
+F D V+WN+M+ Y Q +G K L+L+ M +G D FTLA+V +
Sbjct: 474 LFERHNFDL--VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 533
Query: 253 DLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDLVLWNTMI 312
++ G Q HA IKSGY + V SG++D+Y KCG M + FD I PD V W TMI
Sbjct: 534 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD-MSAAQFAFDSIPVPDDVAWTTMI 593
Query: 313 SGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHALAFKLDI 372
SG + + A F QM+ G PD+ ++ + A S +++ QGRQ+HA A KL+
Sbjct: 594 SG-CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 653
Query: 373 PSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGFQSLDLFQ 432
+N V +LV MY+KCG++ DA LF + N+ ++N+M+ G AQHG G ++L LF+
Sbjct: 654 -TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 713
Query: 433 RMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCLIDLLGRA 492
+M +G P +TFI VL+AC+H+G V + M +GI+PE EH+SCL D LGRA
Sbjct: 714 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 773
Query: 493 GKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNAAPYVMLA 552
G +AE LI ++ + + LL ACR G+ E + A LL+LEP +++ YV+L+
Sbjct: 774 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 833
Query: 553 NIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLITKIHEYLE 612
N+YA +W+++ R +M+ +KK PG SWIEV +IHIFV +D + I+ ++
Sbjct: 834 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 893
Query: 613 EMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREGEPILVVK 672
+M+R IK+ GY P+ V + + E+E L +HSEKLAVAFGL+ + PI V+K
Sbjct: 894 DMIRDIKQEGYVPETDFTLV---DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIK 953
Query: 673 NLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
NLR+C DCHNA+KYI+ V REI +RD +RFH FKDG CSCGDYW
Sbjct: 954 NLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of Sed0025228 vs. ExPASy TrEMBL
Match:
A0A6J1FSH2 (pentatricopeptide repeat-containing protein At3g49710 OS=Cucurbita moschata OX=3662 GN=LOC111448028 PE=3 SV=1)
HSP 1 Score: 1325.5 bits (3429), Expect = 0.0e+00
Identity = 637/712 (89.47%), Postives = 673/712 (94.52%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQSFRH+LKTCIA+R+LRTG +LHALYIKSF+P STY SNHF+LLYSKCRRLSAARRVFD
Sbjct: 8 LQSFRHVLKTCIAQRDLRTGMSLHALYIKSFVPASTYFSNHFILLYSKCRRLSAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
QTQ+CN+FSFN LI+AYAKESFVEVAR+LFDKM QPD VSYNTLIAAYAQR D+E AFQL
Sbjct: 68 QTQECNIFSFNALIAAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
F+EMREA LDMDGFTLSG+ITACGD VALI QLHALSV AGFDCYASVGNAL+T YSKNG
Sbjct: 128 FVEMREALLDMDGFTLSGIITACGDDVALIRQLHALSVAAGFDCYASVGNALITYYSKNG 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FLN AQRIFY MG D+DEVSWNSMVVAYMQHREGSKAL LY+EMT RGLVVDMFTLASVL
Sbjct: 188 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALGLYMEMTLRGLVVDMFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDLSGGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGG ML CRKVFDEICKPDL
Sbjct: 248 TAFTNVQDLSGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGSMLSCRKVFDEICKPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSLFEE SDEALECFR++QG GH PDDCSLVCVISAC+NMSSPSQGRQVHA
Sbjct: 308 VLWNTMISGYSLFEEFSDEALECFRRLQGVGHLPDDCSLVCVISACANMSSPSQGRQVHA 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
L FKLDIPSNRISVNNAL+AMYSKCGNLRDARRLFDTMPEHN VSFNS+IAGYAQHGMGF
Sbjct: 368 LTFKLDIPSNRISVNNALIAMYSKCGNLRDARRLFDTMPEHNTVSFNSIIAGYAQHGMGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL+LFQRML+MGFTPTNITFISVLAACAHTGRV++GK YFNMMKQKFGIEPEAEHFSCL
Sbjct: 428 QSLNLFQRMLDMGFTPTNITFISVLAACAHTGRVQDGKIYFNMMKQKFGIEPEAEHFSCL 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLLGRAGK EAERLI TIPFNPGSIFWSALLGACRTHGNMELA KAANHLLQLEPSNA
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFNPGSIFWSALLGACRTHGNMELAAKAANHLLQLEPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIYADNGRWEDVA+VRKLMRDRG+KKKPGCSWIEV+RR HIFVAED HP+I
Sbjct: 548 APYVMLANIYADNGRWEDVASVRKLMRDRGVKKKPGCSWIEVDRRTHIFVAEDTSHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREG 662
KIHEYLEEM+RKIKK GY PDVRS S+G +GIR+REEELRLGHHSEKLAVAFGLMC+REG
Sbjct: 608 KIHEYLEEMMRKIKKAGYVPDVRSISIGTNGIRKREEELRLGHHSEKLAVAFGLMCTREG 667
Query: 663 EPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
EPILVVKNLRICVDCHNAIK+ISAVVKREITVRD HRFHCFKDGQCSCGDYW
Sbjct: 668 EPILVVKNLRICVDCHNAIKFISAVVKREITVRDTHRFHCFKDGQCSCGDYW 719
BLAST of Sed0025228 vs. ExPASy TrEMBL
Match:
A0A6J1KGE1 (pentatricopeptide repeat-containing protein At3g49710-like OS=Cucurbita maxima OX=3661 GN=LOC111494876 PE=3 SV=1)
HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 637/712 (89.47%), Postives = 671/712 (94.24%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQSFRH+LKTCIA+R++RTGK+LHALYIKSF+P STY+SNHF+LLYSKCRRLSAARRVFD
Sbjct: 8 LQSFRHVLKTCIAQRDVRTGKSLHALYIKSFVPASTYISNHFILLYSKCRRLSAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
QTQ+CN+FSFN LISAYAKESFVEVAR+LFDKM QPD VSYNTLIAAYAQR D+E AFQL
Sbjct: 68 QTQECNIFSFNALISAYAKESFVEVARELFDKMSQPDPVSYNTLIAAYAQRGDVESAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
F+EMREA LDMDGFTLSG+ITACGD VALI QLHALSVVAGFDCY SVGNAL+T YSKN
Sbjct: 128 FVEMREALLDMDGFTLSGIITACGDDVALIRQLHALSVVAGFDCYVSVGNALITYYSKNR 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FLN AQRIFY MG D+DEVSWNSMVVAYMQHREGSKALELY+EMT RGLVVDMFTLASVL
Sbjct: 188 FLNEAQRIFYGMGEDKDEVSWNSMVVAYMQHREGSKALELYMEMTLRGLVVDMFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDLSGGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGG ML CRKVFDEICKPDL
Sbjct: 248 TAFTNVQDLSGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGSMLSCRKVFDEICKPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSLFEE SDEALECFR++QG GH PDDCSLVCVISAC+NMSSPSQGRQVHA
Sbjct: 308 VLWNTMISGYSLFEEFSDEALECFRRLQGVGHLPDDCSLVCVISACANMSSPSQGRQVHA 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
L FKLDIPSNRISVNNAL+AMYSKCGNLRDARRLFDTMPEHN VSFNSMIAGYAQHGMGF
Sbjct: 368 LTFKLDIPSNRISVNNALIAMYSKCGNLRDARRLFDTMPEHNTVSFNSMIAGYAQHGMGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL+LFQRMLEMGFTPT ITFISVLAACAHTGRV++GK YFNMMKQKFGIEPEAEHFSCL
Sbjct: 428 QSLNLFQRMLEMGFTPTKITFISVLAACAHTGRVQDGKIYFNMMKQKFGIEPEAEHFSCL 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLLGRAGK EAERLI TIPFNPGSI WSALLGACRTHGNMELA KAANHLLQLEPSNA
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFNPGSILWSALLGACRTHGNMELAAKAANHLLQLEPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIYADNGRWEDV +VRKLMRDRG+KKKPGCSWIEV+RR HIFVAED HP+I
Sbjct: 548 APYVMLANIYADNGRWEDVGSVRKLMRDRGVKKKPGCSWIEVDRRTHIFVAEDTSHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREG 662
KIHEYLEEM+RKIKK GY PDVRS S+ DGIR+REEELRLGHHSEKLAVAFGLMC+REG
Sbjct: 608 KIHEYLEEMMRKIKKAGYVPDVRSISIVTDGIRKREEELRLGHHSEKLAVAFGLMCTREG 667
Query: 663 EPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
EPILVVKNLRICVDCHNAIK+ISAVVKREITVRD HRFHCFKDGQCSCGDYW
Sbjct: 668 EPILVVKNLRICVDCHNAIKFISAVVKREITVRDTHRFHCFKDGQCSCGDYW 719
BLAST of Sed0025228 vs. ExPASy TrEMBL
Match:
A0A6J1C5E0 (pentatricopeptide repeat-containing protein At3g49710 OS=Momordica charantia OX=3673 GN=LOC111008109 PE=3 SV=1)
HSP 1 Score: 1282.3 bits (3317), Expect = 0.0e+00
Identity = 626/716 (87.43%), Postives = 663/716 (92.60%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQ+FR ILKTCIAER+L TGK+LHA+YIKSF+PTSTYLSNHFVLLYSKCRRL+AARRVFD
Sbjct: 8 LQTFRQILKTCIAERDLLTGKSLHAMYIKSFVPTSTYLSNHFVLLYSKCRRLAAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
QTQ+CN+FSFN LISAYAKES VEVA QLFD+MPQPDSVSYNTLIAAYAQR DIEPAFQL
Sbjct: 68 QTQECNIFSFNALISAYAKESCVEVAHQLFDEMPQPDSVSYNTLIAAYAQRGDIEPAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
F+EMREAFLDMDGFTLSG+ITACGD + LI QLHAL+VVAGFD YAS+ NAL+T YSKNG
Sbjct: 128 FVEMREAFLDMDGFTLSGIITACGDDIGLIRQLHALTVVAGFDSYASIHNALITYYSKNG 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FLN AQ IFY MG +DEVSWNSMVVAYMQHREGSKAL+LY EM RGLV+DMFTLASVL
Sbjct: 188 FLNEAQGIFYGMGEIKDEVSWNSMVVAYMQHREGSKALDLYREMGVRGLVIDMFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDL GGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEIC PDL
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICNPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSL+EELSD+ALECFRQ+Q GH PDDCSLVCVISACSNMSSPSQGRQVHA
Sbjct: 308 VLWNTMISGYSLYEELSDKALECFRQLQCVGHRPDDCSLVCVISACSNMSSPSQGRQVHA 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
LAFKLDIPSNRISVNNAL+AMYSKCGNL+ ARR+FDTM HN VSFNSMI+ YAQHG+GF
Sbjct: 368 LAFKLDIPSNRISVNNALIAMYSKCGNLQAARRVFDTMRVHNTVSFNSMISSYAQHGLGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL LFQRMLEM FTPTNITFISVLAACAHTGRVE+GK YFNMMKQKFGIEPEAEHFSCL
Sbjct: 428 QSLHLFQRMLEMSFTPTNITFISVLAACAHTGRVEDGKLYFNMMKQKFGIEPEAEHFSCL 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLLGRAGK EAERLI T+PFNPGSIFWSALLGACRTHGNM+LAVKAAN LLQLEPSNA
Sbjct: 488 IDLLGRAGKLSEAERLIETLPFNPGSIFWSALLGACRTHGNMKLAVKAANQLLQLEPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIYADNGRWEDVATVRKLMRDRG+KKKPGCSW EVNRRIH+FVAED HP+I
Sbjct: 548 APYVMLANIYADNGRWEDVATVRKLMRDRGVKKKPGCSWTEVNRRIHVFVAEDTSHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSA---SVGGDGIRQR-EEELRLGHHSEKLAVAFGLMC 662
KIHEYLEEM+RKIKK GY P +RSA SVG DGIRQR EEELRLGHHSEKLAVAFGLM
Sbjct: 608 KIHEYLEEMMRKIKKAGYRPGIRSAMSVSVGDDGIRQREEEELRLGHHSEKLAVAFGLMS 667
Query: 663 SREGEPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
SREGEPILVVKNLRIC+DCHNAIKYISAVV+REITVRD HRFHCFK QCSCGDYW
Sbjct: 668 SREGEPILVVKNLRICMDCHNAIKYISAVVEREITVRDSHRFHCFKGEQCSCGDYW 723
BLAST of Sed0025228 vs. ExPASy TrEMBL
Match:
A0A5A7TIR2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00970 PE=3 SV=1)
HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 614/713 (86.12%), Postives = 660/713 (92.57%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQSFR ILKTCIA+R+LRTGK+LHALYIKSF+PTSTYLSNHF+LLYSKCRRLSAARRVFD
Sbjct: 8 LQSFRKILKTCIAQRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
T DCNVFSFNTLISAYAKES+VEVAR+LFD+MPQPDSVSYNTLIAAYAQ D +PAFQL
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVARKLFDEMPQPDSVSYNTLIAAYAQLGDTQPAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
FLEMREAFLDMDGFTLSG+ITACG +VALI QLHALSVV G D Y SVGN L+T YSKNG
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACGVNVALITQLHALSVVTGLDSYVSVGNTLITCYSKNG 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FL A+RIF+ + DRDEVSWNSMVVAYMQHREGSKALELYLEMT RGL+VD+FTLASVL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDL GGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVF+EIC PDL
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFEEICNPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSL+E+LS+EALECFRQ+Q GH PDDCSLVCVISACSNMSSPSQGRQVH
Sbjct: 308 VLWNTMISGYSLYEDLSNEALECFRQLQRVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
LA KLDIPSNRISVNNAL+AMYSKCGNLRDA+ LFDTMPEHN+VS+NSMIAGYAQHG+GF
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNIVSYNSMIAGYAQHGIGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL LFQRMLEMGFTPTNITFISVLAACAHTGRVE+GK YFNMMKQKFGIEPEA HFSC+
Sbjct: 428 QSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCM 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLL RAGK EAERLI TIPF+PGS FWSALLGACR HGN+ELAVKAAN LLQL+PSNA
Sbjct: 488 IDLLSRAGKLNEAERLIETIPFDPGSFFWSALLGACRIHGNVELAVKAANRLLQLDPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIY+DNGR +D A+VRKLMRDRG+KKKPGCSWIEVNRRIHIFVAED FHP+I
Sbjct: 548 APYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSASVGGDG-IRQREEELRLGHHSEKLAVAFGLMCSRE 662
KI EYLEEM+RKIKKVGY+P+VRSA VG D + QREEELRLG+HSEKLAV+FGLM +RE
Sbjct: 608 KIQEYLEEMIRKIKKVGYTPEVRSALVGDDDRVTQREEELRLGYHSEKLAVSFGLMSTRE 667
Query: 663 GEPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
GEPILV KNLRICVDCHNAI+YIS VVKREITVRD HRFHCFKDGQCSCG YW
Sbjct: 668 GEPILVFKNLRICVDCHNAIRYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
BLAST of Sed0025228 vs. ExPASy TrEMBL
Match:
A0A1S3B5M8 (pentatricopeptide repeat-containing protein At3g49710 OS=Cucumis melo OX=3656 GN=LOC103486047 PE=3 SV=1)
HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 614/713 (86.12%), Postives = 660/713 (92.57%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFD 62
LQSFR ILKTCIA+R+LRTGK+LHALYIKSF+PTSTYLSNHF+LLYSKCRRLSAARRVFD
Sbjct: 8 LQSFRKILKTCIAQRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67
Query: 63 QTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQL 122
T DCNVFSFNTLISAYAKES+VEVAR+LFD+MPQPDSVSYNTLIAAYAQ D +PAFQL
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVARKLFDEMPQPDSVSYNTLIAAYAQLGDTQPAFQL 127
Query: 123 FLEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNG 182
FLEMREAFLDMDGFTLSG+ITACG +VALI QLHALSVV G D Y SVGN L+T YSKNG
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACGVNVALITQLHALSVVTGLDSYVSVGNTLITCYSKNG 187
Query: 183 FLNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVL 242
FL A+RIF+ + DRDEVSWNSMVVAYMQHREGSKALELYLEMT RGL+VD+FTLASVL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247
Query: 243 TAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDL 302
TAFTNVQDL GGLQFHAK+IKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVF+EIC PDL
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFEEICNPDL 307
Query: 303 VLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHA 362
VLWNTMISGYSL+E+LS+EALECFRQ+Q GH PDDCSLVCVISACSNMSSPSQGRQVH
Sbjct: 308 VLWNTMISGYSLYEDLSNEALECFRQLQRVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367
Query: 363 LAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGF 422
LA KLDIPSNRISVNNAL+AMYSKCGNLRDA+ LFDTMPEHN+VS+NSMIAGYAQHG+GF
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNIVSYNSMIAGYAQHGIGF 427
Query: 423 QSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCL 482
QSL LFQRMLEMGFTPTNITFISVLAACAHTGRVE+GK YFNMMKQKFGIEPEA HFSC+
Sbjct: 428 QSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCM 487
Query: 483 IDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNA 542
IDLL RAGK EAERLI TIPF+PGS FWSALLGACR HGN+ELAVKAAN LLQL+PSNA
Sbjct: 488 IDLLSRAGKLNEAERLIETIPFDPGSFFWSALLGACRIHGNVELAVKAANRLLQLDPSNA 547
Query: 543 APYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLIT 602
APYVMLANIY+DNGR +D A+VRKLMRDRG+KKKPGCSWIEVNRRIHIFVAED FHP+I
Sbjct: 548 APYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIK 607
Query: 603 KIHEYLEEMVRKIKKVGYSPDVRSASVGGDG-IRQREEELRLGHHSEKLAVAFGLMCSRE 662
KI EYLEEM+RKIKKVGY+P+VRSA VG D + QREEELRLG+HSEKLAV+FGLM +RE
Sbjct: 608 KIQEYLEEMIRKIKKVGYTPEVRSALVGDDDRVTQREEELRLGYHSEKLAVSFGLMSTRE 667
Query: 663 GEPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
GEPILV KNLRICVDCHNAI+YIS VVKREITVRD HRFHCFKDGQCSCG YW
Sbjct: 668 GEPILVFKNLRICVDCHNAIRYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
BLAST of Sed0025228 vs. TAIR 10
Match:
AT3G49710.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 935.6 bits (2417), Expect = 2.3e-272
Identity = 452/713 (63.39%), Postives = 554/713 (77.70%), Query Frame = 0
Query: 4 QSFRHILKTCIAERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFDQ 63
++FR +L +AER+L TGK+LHALY+KS + +STYLSNHFV LYSKC RLS AR F
Sbjct: 9 KTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS 68
Query: 64 TQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLF 123
T++ NVFS+N ++ AYAK+S + +ARQLFD++PQPD+VSYNTLI+ YA + A LF
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF 128
Query: 124 LEMREAFLDMDGFTLSGVITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNGF 183
MR+ ++DGFTLSG+I AC D V LI QLH SV GFD Y+SV NA +T YSK G
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 184 LNGAQRIFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVLT 243
L A +FY M RDEVSWNSM+VAY QH+EG+KAL LY EM +G +DMFTLASVL
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 244 AFTNVQDLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGC--MLDCRKVFDEICKPD 303
A T++ L GG QFH K+IK+G+HQN HVGSGLID YSKCGGC M D KVF EI PD
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 304 LVLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVH 363
LV+WNTMISGYS+ EELS+EA++ FRQMQ GH PDDCS VCV SACSN+SSPSQ +Q+H
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 364 ALAFKLDIPSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMG 423
LA K IPSNRISVNNAL+++Y K GNL+DAR +FD MPE N VSFN MI GYAQHG G
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 424 FQSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSC 483
++L L+QRML+ G P ITF++VL+ACAH G+V+ G+ YFN MK+ F IEPEAEH+SC
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC 488
Query: 484 LIDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSN 543
+IDLLGRAGK EAER I +P+ PGS+ W+ALLGACR H NM LA +AAN L+ ++P
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLA 548
Query: 544 AAPYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLI 603
A PYVMLAN+YAD +WE++A+VRK MR + ++KKPGCSWIEV ++ H+FVAED HP+I
Sbjct: 549 ATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608
Query: 604 TKIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSRE 663
+++EYLEEM++K+KKVGY D + A V D + +EE+RLGHHSEKLAVAFGLM +R+
Sbjct: 609 REVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRD 668
Query: 664 GEPILVVKNLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
GE ++VVKNLRIC DCHNAIK++SAV REI VRD RFHCFKDG+CSCGDYW
Sbjct: 669 GEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
BLAST of Sed0025228 vs. TAIR 10
Match:
AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 508.4 bits (1308), Expect = 9.0e-144
Identity = 272/740 (36.76%), Postives = 425/740 (57.43%), Query Frame = 0
Query: 10 LKTCI---AERNLRTGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVFDQTQD 69
+K CI A R K +H I++ T+L N+ V Y+ + + ARRVFD+
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 70 CNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLF-LE 129
N+FS+N L+ AY+K + F+K+P D V++N LI Y+ + A + +
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 130 MREAFLDMDGFTLSGV--ITACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNGF 189
MR+ ++ TL + +++ HV+L Q+H + GF+ Y VG+ LL Y+ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 190 LNGAQRIFYEM-----------------------------GVDRDEVSWNSMVVAYMQHR 249
++ A+++FY + G+++D VSW +M+ Q+
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 250 EGSKALELYLEMTARGLVVDMFTLASVLTAFTNVQDLSGGLQFHAKMIKSGYHQNCHVGS 309
+A+E + EM +GL +D + SVL A + ++ G Q HA +I++ + + +VGS
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 310 GLIDLYSKCGGCMLDCRKVFDEICKPDLVLWNTMISGYSLFEELSDEALECFRQMQGFGH 369
LID+Y KC C+ + VFD + + ++V W M+ GY ++EA++ F MQ G
Sbjct: 310 ALIDMYCKC-KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR-AEEAVKIFLDMQRSGI 369
Query: 370 SPDDCSLVCVISACSNMSSPSQGRQVHALAFKLDIPSNRISVNNALVAMYSKCGNLRDAR 429
PD +L ISAC+N+SS +G Q H A + + ++V+N+LV +Y KCG++ D+
Sbjct: 370 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVTLYGKCGDIDDST 429
Query: 430 RLFDTMPEHNVVSFNSMIAGYAQHGMGFQSLDLFQRMLEMGFTPTNITFISVLAACAHTG 489
RLF+ M + VS+ +M++ YAQ G +++ LF +M++ G P +T V++AC+ G
Sbjct: 430 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 489
Query: 490 RVENGKTYFNMMKQKFGIEPEAEHFSCLIDLLGRAGKFGEAERLIATIPFNPGSIFWSAL 549
VE G+ YF +M ++GI P H+SC+IDL R+G+ EA R I +PF P +I W+ L
Sbjct: 490 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 549
Query: 550 LGACRTHGNMELAVKAANHLLQLEPSNAAPYVMLANIYADNGRWEDVATVRKLMRDRGMK 609
L ACR GN+E+ AA L++L+P + A Y +L++IYA G+W+ VA +R+ MR++ +K
Sbjct: 550 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 609
Query: 610 KKPGCSWIEVNRRIHIFVAEDVFHPLITKIHEYLEEMVRKIKKVGYSPDVRSASVGGDGI 669
K+PG SWI+ ++H F A+D P + +I+ LEE+ KI GY PD S +
Sbjct: 610 KEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPD---TSFVHHDV 669
Query: 670 RQREEELRLGHHSEKLAVAFGLMCSREGEPILVVKNLRICVDCHNAIKYISAVVKREITV 715
+ + L +HSE+LA+AFGL+ G+PI V KNLR+CVDCHNA K+IS+V REI V
Sbjct: 670 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 729
BLAST of Sed0025228 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 484.6 bits (1246), Expect = 1.4e-136
Identity = 286/780 (36.67%), Postives = 428/780 (54.87%), Query Frame = 0
Query: 3 LQSFRHILKTCIAERNLR-TGKTLHALYIKSFIPTSTYLSNHFVLLYSKCRRLSAARRVF 62
L+ ++L+ + + N R T + +H IKS + S YL N+ + +YSK AR++F
Sbjct: 13 LELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLF 72
Query: 63 DQTQDCNVFSFNTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQ 122
D+ FS+NT++SAY+K ++ + FD++PQ DSVS+ T+I Y A +
Sbjct: 73 DEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIR 132
Query: 123 LFLEMREAFLDMDGFTLSGVI--TACGDHVALIHQLHALSVVAGFDCYASVGNALLTNYS 182
+ +M + ++ FTL+ V+ A + ++H+ V G SV N+LL Y+
Sbjct: 133 VMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYA 192
Query: 183 KNGFLNGAQRIF------------------------------YEMGVDRDEVSWNSMVVA 242
K G A+ +F +E +RD V+WNSM+
Sbjct: 193 KCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISG 252
Query: 243 YMQHREGSKALELYLEMTARGLV-VDMFTLASVLTAFTNVQDLSGGLQFHAKMIKSGYHQ 302
+ Q +AL+++ +M L+ D FTLASVL+A N++ L G Q H+ ++ +G+
Sbjct: 253 FNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI 312
Query: 303 NCHVGSGLIDLYSKCGGC--------------------------------MLDCRKVFDE 362
+ V + LI +YS+CGG M + +F
Sbjct: 313 SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVS 372
Query: 363 ICKPDLVLWNTMISGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQ 422
+ D+V W MI GY EA+ FR M G G P+ +L ++S S+++S S
Sbjct: 373 LKDRDVVAWTAMIVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSH 432
Query: 423 GRQVHALAFKL-DIPSNRISVNNALVAMYSKCGNLRDARRLFDTMP-EHNVVSFNSMIAG 482
G+Q+H A K +I S +SV+NAL+ MY+K GN+ A R FD + E + VS+ SMI
Sbjct: 433 GKQIHGSAVKSGEIYS--VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 492
Query: 483 YAQHGMGFQSLDLFQRMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEP 542
AQHG ++L+LF+ ML G P +IT++ V +AC H G V G+ YF+MMK I P
Sbjct: 493 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP 552
Query: 543 EAEHFSCLIDLLGRAGKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHL 602
H++C++DL GRAG EA+ I +P P + W +LL ACR H N++L AA L
Sbjct: 553 TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERL 612
Query: 603 LQLEPSNAAPYVMLANIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAE 662
L LEP N+ Y LAN+Y+ G+WE+ A +RK M+D +KK+ G SWIEV ++H+F E
Sbjct: 613 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 672
Query: 663 DVFHPLITKIHEYLEEMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAF 715
D HP +I+ ++++ +IKK+GY PD +ASV D + + +E L HHSEKLA+AF
Sbjct: 673 DGTHPEKNEIYMTMKKIWDEIKKMGYVPD--TASVLHD-LEEEVKEQILRHHSEKLAIAF 732
BLAST of Sed0025228 vs. TAIR 10
Match:
AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 480.7 bits (1236), Expect = 2.0e-135
Identity = 263/645 (40.78%), Postives = 389/645 (60.31%), Query Frame = 0
Query: 73 NTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLFLEMREAFLD 132
N L+ +Y + +++A LF+++P+ DSV++NTLI Y + + LFL+MR++
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 133 MDGFTLSGVITA-CGDH-VALIHQLHALSVVAGFDCYASVGNALLTNYSKNGFLNGAQRI 192
FT SGV+ A G H AL QLHALSV GF ASVGN +L YSK+ + + +
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 193 FYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVLTAFTNVQD 252
F EM + D VS+N ++ +Y Q + +L + EM G F A++L+ N+
Sbjct: 308 FDEM-PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 367
Query: 253 LSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDLVLWNTMIS 312
L G Q H + + + HVG+ L+D+Y+KC + +F + + V W +IS
Sbjct: 368 LQMGRQLHCQALLATADSILHVGNSLVDMYAKC-EMFEEAELIFKSLPQRTTVSWTALIS 427
Query: 313 GYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHALAFKLDIP 372
GY + + L L+ F +M+G D + V+ A ++ +S G+Q+HA +
Sbjct: 428 GY-VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 487
Query: 373 SNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGFQSLDLFQR 432
N S + LV MY+KCG+++DA ++F+ MP+ N VS+N++I+ +A +G G ++ F +
Sbjct: 488 ENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 547
Query: 433 MLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCLIDLLGRAG 492
M+E G P +++ + VL AC+H G VE G YF M +GI P+ +H++C++DLLGR G
Sbjct: 548 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 607
Query: 493 KFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEP-SNAAPYVMLA 552
+F EAE+L+ +PF P I WS++L ACR H N LA +AA L +E +AA YV ++
Sbjct: 608 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 667
Query: 553 NIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLITKIHEYLE 612
NIYA G WE V V+K MR+RG+KK P SW+EVN +IH+F + D HP +I +
Sbjct: 668 NIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKIN 727
Query: 613 EMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREGEPILVVK 672
E+ +I++ GY PD ++SV D Q + E L +HSE+LAVAF L+ + EG PI+V+K
Sbjct: 728 ELTAEIEREGYKPD--TSSVVQDVDEQMKIE-SLKYHSERLAVAFALISTPEGCPIVVMK 787
Query: 673 NLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
NLR C DCH AIK IS +VKREITVRD RFH F +G CSCGDYW
Sbjct: 788 NLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
BLAST of Sed0025228 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 471.1 bits (1211), Expect = 1.6e-132
Identity = 257/645 (39.84%), Postives = 379/645 (58.76%), Query Frame = 0
Query: 73 NTLISAYAKESFVEVARQLFDKMPQPDSVSYNTLIAAYAQRADIEPAFQLFLEMREAFLD 132
N+LI+ Y K AR +FD M + D +S+N++IA AQ A LF+++ L
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 133 MDGFTLSGVITACG---DHVALIHQLHALSVVAGFDCYASVGNALLTNYSKNGFLNGAQR 192
D +T++ V+ A + ++L Q+H ++ + V AL+ YS+N + A+
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 193 IFYEMGVDRDEVSWNSMVVAYMQHREGSKALELYLEMTARGLVVDMFTLASVLTAFTNVQ 252
+F D V+WN+M+ Y Q +G K L+L+ M +G D FTLA+V +
Sbjct: 474 LFERHNFDL--VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 533
Query: 253 DLSGGLQFHAKMIKSGYHQNCHVGSGLIDLYSKCGGCMLDCRKVFDEICKPDLVLWNTMI 312
++ G Q HA IKSGY + V SG++D+Y KCG M + FD I PD V W TMI
Sbjct: 534 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD-MSAAQFAFDSIPVPDDVAWTTMI 593
Query: 313 SGYSLFEELSDEALECFRQMQGFGHSPDDCSLVCVISACSNMSSPSQGRQVHALAFKLDI 372
SG + + A F QM+ G PD+ ++ + A S +++ QGRQ+HA A KL+
Sbjct: 594 SG-CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 653
Query: 373 PSNRISVNNALVAMYSKCGNLRDARRLFDTMPEHNVVSFNSMIAGYAQHGMGFQSLDLFQ 432
+N V +LV MY+KCG++ DA LF + N+ ++N+M+ G AQHG G ++L LF+
Sbjct: 654 -TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 713
Query: 433 RMLEMGFTPTNITFISVLAACAHTGRVENGKTYFNMMKQKFGIEPEAEHFSCLIDLLGRA 492
+M +G P +TFI VL+AC+H+G V + M +GI+PE EH+SCL D LGRA
Sbjct: 714 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 773
Query: 493 GKFGEAERLIATIPFNPGSIFWSALLGACRTHGNMELAVKAANHLLQLEPSNAAPYVMLA 552
G +AE LI ++ + + LL ACR G+ E + A LL+LEP +++ YV+L+
Sbjct: 774 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 833
Query: 553 NIYADNGRWEDVATVRKLMRDRGMKKKPGCSWIEVNRRIHIFVAEDVFHPLITKIHEYLE 612
N+YA +W+++ R +M+ +KK PG SWIEV +IHIFV +D + I+ ++
Sbjct: 834 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 893
Query: 613 EMVRKIKKVGYSPDVRSASVGGDGIRQREEELRLGHHSEKLAVAFGLMCSREGEPILVVK 672
+M+R IK+ GY P+ V + + E+E L +HSEKLAVAFGL+ + PI V+K
Sbjct: 894 DMIRDIKQEGYVPETDFTLV---DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIK 953
Query: 673 NLRICVDCHNAIKYISAVVKREITVRDCHRFHCFKDGQCSCGDYW 715
NLR+C DCHNA+KYI+ V REI +RD +RFH FKDG CSCGDYW
Sbjct: 954 NLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023547019.1 | 0.0e+00 | 89.75 | pentatricopeptide repeat-containing protein At3g49710 [Cucurbita pepo subsp. pep... | [more] |
KAG6600674.1 | 0.0e+00 | 89.75 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG7031312.1 | 0.0e+00 | 89.72 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022943237.1 | 0.0e+00 | 89.47 | pentatricopeptide repeat-containing protein At3g49710 [Cucurbita moschata] | [more] |
XP_023000646.1 | 0.0e+00 | 89.47 | pentatricopeptide repeat-containing protein At3g49710-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9M2Y7 | 3.2e-271 | 63.39 | Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX... | [more] |
Q9CAA8 | 1.3e-142 | 36.76 | Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th... | [more] |
Q9SHZ8 | 2.0e-135 | 36.67 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Q9S7F4 | 2.8e-134 | 40.78 | Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th... | [more] |
Q9SMZ2 | 2.3e-131 | 39.84 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FSH2 | 0.0e+00 | 89.47 | pentatricopeptide repeat-containing protein At3g49710 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KGE1 | 0.0e+00 | 89.47 | pentatricopeptide repeat-containing protein At3g49710-like OS=Cucurbita maxima O... | [more] |
A0A6J1C5E0 | 0.0e+00 | 87.43 | pentatricopeptide repeat-containing protein At3g49710 OS=Momordica charantia OX=... | [more] |
A0A5A7TIR2 | 0.0e+00 | 86.12 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3B5M8 | 0.0e+00 | 86.12 | pentatricopeptide repeat-containing protein At3g49710 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT3G49710.1 | 2.3e-272 | 63.39 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G68930.1 | 9.0e-144 | 36.76 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT2G22070.1 | 1.4e-136 | 36.67 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT3G02010.1 | 2.0e-135 | 40.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G33170.1 | 1.6e-132 | 39.84 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |