Sed0025213 (gene) Chayote v1

Overview


Name	Sed0025213
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box family protein, putative
Location	LG05: 19654405 .. 19655879 (-)
RNA-Seq Expression	Sed0025213
Synteny	Sed0025213

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACTTTTACCTATATCTCAAAATCATTTATAAGCTTTACGATATAGCGATTCAACTACAATGTTGACAATTGCTTATTTTACTTTGGTTCTATAAGAACTCTCGACCCTTTCTCCATTTTTTATCCCCAAAAACCTTAACTAATTGTCTACAAAGTCTCCGTCAAAAAAAAAAGATCATGCCTGCTTCCTTCCATCATCGTCCCTCCACTGCTGCCGACGACGGCGGCGCCATTGCCGCCCTGCACTCCGACATTCTTCAGACTCATATTCTGACCCGCCTCGACGGCGCTGCCCTAACCTCCGCCGCCTGTGCCTCTTACCGCTTCCGCCGCCTCTCGGCCGAGGACCAACTCTGGCGCCAGATTTGCTCCGCCTCCTGGCCGTCAATCACTCATCCGCGAGTCTGGCACGCCATATCCGAGTTCCCGTCCAAACACCGATCCTTCTTCTCCGACGTGTTTCCGGTGCTGGATTGCCGGTCGCTGCGGTGCGATCTGGACCGTTTCCCATCCTCTTCGTGGACCTCCGAATTGATCTCCGCCGTGGACATTCACTATGAGGACAAACTCGTGTTCTCGAAAGTCCAACCAATCGAGACGGAGACGAATTGGTTCCTCTACTCCCCGTTTCGCGTGGACCTAATGGATCCAAAAGATTCAACTCCGTGGCCGATTAAAAGAGCAGAGAAATACGAAGAGTGGGTAGGGCACATAGAAGAGAATCTAAGGGTAAGTTGGATCATAATCGACCCAATTAATAACCGAGCGGGGAACGTGTCGAGTAGGCAGGCGGTGAAAGTGCAGCGGCACTGGTTGTCCGGCGAGATACAGGTACAATACACGACGGTGATGGGCGGGGACGGGAGGGCGGGGTCGAGGGCGGAGTTGGTGCAGTGCGCGGTGGTGGTGAGTTGCGGCGAGAGAGCAGAGCATGGCGTGGAGATGAGCGTTACAGAGGTGAGCTTGCAGATGTTGGACATGGGAGGGAAGCATTTGAACGGGAAGGAGAGTTTGAGGATTTTGGGGGAAGCCATGGAAAAGGGGAACAGAATTCGGGCAAACAAAGGGGAACCAAAACTGAGGTTCACAGAATACCAAGAGTTCACGAGGAAGAGGAAAGCCAGGAAGGACAGGATTGAGAATGCTCTCGATATGCTCTGTGTTTTTACTGGAATCCTCATTCTCTTTTCTTTCTTCTCTTTCCTCTTCTTCTTTAGCTAAATACATACATTACCTTTAATTCCATCACAAACAAATACCCTTTTCAAGTTCTTCATGGGACGGGAAATAATTCAAAATTTAACTTTCAAGTTCTTCATGGGACAGGGGAAATAATTCAAAATTTAACTCAGAAGTTTTTTTCGCATTTTTTCGTTATTGTAATTAACATATGACTTTAAGTTATTGTAATTAATTATGGTCTTTATATACTTACTAAATATGAACTACTTATAAAACTCAATGCGAGTTACT

mRNA sequence

ATAACTTTTACCTATATCTCAAAATCATTTATAAGCTTTACGATATAGCGATTCAACTACAATGTTGACAATTGCTTATTTTACTTTGGTTCTATAAGAACTCTCGACCCTTTCTCCATTTTTTATCCCCAAAAACCTTAACTAATTGTCTACAAAGTCTCCGTCAAAAAAAAAAGATCATGCCTGCTTCCTTCCATCATCGTCCCTCCACTGCTGCCGACGACGGCGGCGCCATTGCCGCCCTGCACTCCGACATTCTTCAGACTCATATTCTGACCCGCCTCGACGGCGCTGCCCTAACCTCCGCCGCCTGTGCCTCTTACCGCTTCCGCCGCCTCTCGGCCGAGGACCAACTCTGGCGCCAGATTTGCTCCGCCTCCTGGCCGTCAATCACTCATCCGCGAGTCTGGCACGCCATATCCGAGTTCCCGTCCAAACACCGATCCTTCTTCTCCGACGTGTTTCCGGTGCTGGATTGCCGGTCGCTGCGGTGCGATCTGGACCGTTTCCCATCCTCTTCGTGGACCTCCGAATTGATCTCCGCCGTGGACATTCACTATGAGGACAAACTCGTGTTCTCGAAAGTCCAACCAATCGAGACGGAGACGAATTGGTTCCTCTACTCCCCGTTTCGCGTGGACCTAATGGATCCAAAAGATTCAACTCCGTGGCCGATTAAAAGAGCAGAGAAATACGAAGAGTGGGTAGGGCACATAGAAGAGAATCTAAGGGTAAGTTGGATCATAATCGACCCAATTAATAACCGAGCGGGGAACGTGTCGAGTAGGCAGGCGGTGAAAGTGCAGCGGCACTGGTTGTCCGGCGAGATACAGGTACAATACACGACGGTGATGGGCGGGGACGGGAGGGCGGGGTCGAGGGCGGAGTTGGTGCAGTGCGCGGTGGTGGTGAGTTGCGGCGAGAGAGCAGAGCATGGCGTGGAGATGAGCGTTACAGAGGTGAGCTTGCAGATGTTGGACATGGGAGGGAAGCATTTGAACGGGAAGGAGAGTTTGAGGATTTTGGGGGAAGCCATGGAAAAGGGGAACAGAATTCGGGCAAACAAAGGGGAACCAAAACTGAGGTTCACAGAATACCAAGAGTTCACGAGGAAGAGGAAAGCCAGGAAGGACAGGATTGAGAATGCTCTCGATATGCTCTGTGTTTTTACTGGAATCCTCATTCTCTTTTCTTTCTTCTCTTTCCTCTTCTTCTTTAGCTAAATACATACATTACCTTTAATTCCATCACAAACAAATACCCTTTTCAAGTTCTTCATGGGACGGGAAATAATTCAAAATTTAACTTTCAAGTTCTTCATGGGACAGGGGAAATAATTCAAAATTTAACTCAGAAGTTTTTTTCGCATTTTTTCGTTATTGTAATTAACATATGACTTTAAGTTATTGTAATTAATTATGGTCTTTATATACTTACTAAATATGAACTACTTATAAAACTCAATGCGAGTTACT

Coding sequence (CDS)

ATGCCTGCTTCCTTCCATCATCGTCCCTCCACTGCTGCCGACGACGGCGGCGCCATTGCCGCCCTGCACTCCGACATTCTTCAGACTCATATTCTGACCCGCCTCGACGGCGCTGCCCTAACCTCCGCCGCCTGTGCCTCTTACCGCTTCCGCCGCCTCTCGGCCGAGGACCAACTCTGGCGCCAGATTTGCTCCGCCTCCTGGCCGTCAATCACTCATCCGCGAGTCTGGCACGCCATATCCGAGTTCCCGTCCAAACACCGATCCTTCTTCTCCGACGTGTTTCCGGTGCTGGATTGCCGGTCGCTGCGGTGCGATCTGGACCGTTTCCCATCCTCTTCGTGGACCTCCGAATTGATCTCCGCCGTGGACATTCACTATGAGGACAAACTCGTGTTCTCGAAAGTCCAACCAATCGAGACGGAGACGAATTGGTTCCTCTACTCCCCGTTTCGCGTGGACCTAATGGATCCAAAAGATTCAACTCCGTGGCCGATTAAAAGAGCAGAGAAATACGAAGAGTGGGTAGGGCACATAGAAGAGAATCTAAGGGTAAGTTGGATCATAATCGACCCAATTAATAACCGAGCGGGGAACGTGTCGAGTAGGCAGGCGGTGAAAGTGCAGCGGCACTGGTTGTCCGGCGAGATACAGGTACAATACACGACGGTGATGGGCGGGGACGGGAGGGCGGGGTCGAGGGCGGAGTTGGTGCAGTGCGCGGTGGTGGTGAGTTGCGGCGAGAGAGCAGAGCATGGCGTGGAGATGAGCGTTACAGAGGTGAGCTTGCAGATGTTGGACATGGGAGGGAAGCATTTGAACGGGAAGGAGAGTTTGAGGATTTTGGGGGAAGCCATGGAAAAGGGGAACAGAATTCGGGCAAACAAAGGGGAACCAAAACTGAGGTTCACAGAATACCAAGAGTTCACGAGGAAGAGGAAAGCCAGGAAGGACAGGATTGAGAATGCTCTCGATATGCTCTGTGTTTTTACTGGAATCCTCATTCTCTTTTCTTTCTTCTCTTTCCTCTTCTTCTTTAGCTAA

Protein sequence

MPASFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQICSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAVDIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEENLRVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVVVSCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPKLRFTEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFFFS

Homology

[Close]

BLAST of Sed0025213 vs. NCBI nr
Match: XP_038900570.1 (probable F-box protein At2g36090 [Benincasa hispida])

HSP 1 Score: 525.0 bits (1351), Expect = 4.9e-145
Identity = 265/340 (77.94%), Postives = 296/340 (87.06%), Query Frame = 0


Query: 5   FHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQIC 64
           FHHRPS A DDG AIAALHSDILQTHILTRLDG ALTSAA AS RFRRLS+EDQLWR++C
Sbjct: 8   FHHRPSAADDDGDAIAALHSDILQTHILTRLDGPALTSAASASSRFRRLSSEDQLWRRVC 67

Query: 65  SASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAVD 124
           SASWPSITHP+V  AIS FPS+H+SFFSDVFPVLDCRSLRCDLD   SSS TSE ISAVD
Sbjct: 68  SASWPSITHPKVRQAISAFPSEHQSFFSDVFPVLDCRSLRCDLD-CSSSSSTSESISAVD 127

Query: 125 IHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEENLR 184
           IHY+DKL+FSKV  I TETNWFL SPFRVDL+DPKDS P  I+R+EKYE+W+GH+EENLR
Sbjct: 128 IHYKDKLLFSKVHSIGTETNWFLCSPFRVDLIDPKDSIPSAIRRSEKYEDWLGHLEENLR 187

Query: 185 VSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVVV 244
           VSWI+IDP  NRA N+SSR+AVKV RHWLSG+IQVQYTTVMGGD +AG   E+VQCAVVV
Sbjct: 188 VSWIVIDPNKNRAANISSREAVKVGRHWLSGDIQVQYTTVMGGDRKAGWAMEMVQCAVVV 247

Query: 245 SCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPKLRFT 304
           SCGE+ E G+EM+V EVS+QMLDM GKHLNGKESL ILGEAME+G RIRA KGE KL++ 
Sbjct: 248 SCGEK-EEGMEMNVREVSMQMLDMEGKHLNGKESLGILGEAMERGKRIRAKKGEGKLKYE 307

Query: 305 EYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLF 345
           EY+E  RKRKARK+RIEN LDMLC+FTGI ILFSF  F+F
Sbjct: 308 EYEELKRKRKARKERIENGLDMLCIFTGISILFSFCFFIF 345

[Close]

BLAST of Sed0025213 vs. NCBI nr
Match: TYJ96058.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 521.9 bits (1343), Expect = 4.1e-144
Identity = 267/344 (77.62%), Postives = 297/344 (86.34%), Query Frame = 0


Query: 4   SFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQI 63
           SFHHR S  A+D  AIAALHSDILQTHILTRLDGAALTS A  S RFRRLS+EDQLWR++
Sbjct: 9   SFHHRSS--AED--AIAALHSDILQTHILTRLDGAALTSTASTSSRFRRLSSEDQLWRRV 68

Query: 64  CSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAV 123
           CS SWPSITHP++   IS FPSKH+SFFSDVFPVLDC SLRCDLD   SS  T+ELISAV
Sbjct: 69  CSTSWPSITHPKLQQLISTFPSKHQSFFSDVFPVLDCCSLRCDLDYRYSS--TAELISAV 128

Query: 124 DIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEENL 183
           DIHY++KL+FSKV  IETETNWFL SPFRVDL+DPKDS P PI+R+EKYE+W+GH+EENL
Sbjct: 129 DIHYKNKLLFSKVHSIETETNWFLCSPFRVDLIDPKDSIPSPIRRSEKYEDWLGHLEENL 188

Query: 184 RVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVV 243
            VSWIIIDPINNRA N+SSRQ VKV+RHWLSGEIQVQYTTVMGGD RAGS  E+V+CAVV
Sbjct: 189 TVSWIIIDPINNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVV 248

Query: 244 VSCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPKLRF 303
           VSCGE+ E G+EMSVTEVS+QMLDM GKHLNGKESL IL EAMEKG RIR  KG+ KLR+
Sbjct: 249 VSCGEKEEEGMEMSVTEVSMQMLDMEGKHLNGKESLGILREAMEKGKRIRGRKGDGKLRY 308

Query: 304 TEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFFFS 348
            EY+E  RKRKARK+RIEN LDMLC+FTGI ILFSF SF+FF S
Sbjct: 309 EEYEEMKRKRKARKERIENGLDMLCIFTGIAILFSFSSFIFFSS 346

[Close]

BLAST of Sed0025213 vs. NCBI nr
Match: KAA0061722.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 521.9 bits (1343), Expect = 4.1e-144
Identity = 267/344 (77.62%), Postives = 297/344 (86.34%), Query Frame = 0


Query: 4   SFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQI 63
           SFHHR S  A+D  AIAALHSDILQTHILTRLDGAALTS A  S RFRRLS+EDQLWR++
Sbjct: 8   SFHHRSS--AED--AIAALHSDILQTHILTRLDGAALTSTASTSSRFRRLSSEDQLWRRV 67

Query: 64  CSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAV 123
           CS SWPSITHP++   IS FPSKH+SFFSDVFPVLDC SLRCDLD   SS  T+ELISAV
Sbjct: 68  CSTSWPSITHPKLQQLISTFPSKHQSFFSDVFPVLDCCSLRCDLDYRCSS--TAELISAV 127

Query: 124 DIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEENL 183
           DIHY++KL+FSKV  IETETNWFL SPFRVDL+DPKDS P PI+R+EKYE+W+GH+EENL
Sbjct: 128 DIHYKNKLLFSKVHSIETETNWFLCSPFRVDLIDPKDSIPSPIRRSEKYEDWLGHLEENL 187

Query: 184 RVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVV 243
            VSWIIIDPINNRA N+SSRQ VKV+RHWLSGEIQVQYTTVMGGD RAGS  E+V+CAVV
Sbjct: 188 TVSWIIIDPINNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVV 247

Query: 244 VSCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPKLRF 303
           VSCGE+ E G+EMSVTEVS+QMLDM GKHLNGKESL IL EAMEKG RIR  KG+ KLR+
Sbjct: 248 VSCGEKEEEGMEMSVTEVSMQMLDMEGKHLNGKESLGILREAMEKGKRIRGRKGDGKLRY 307

Query: 304 TEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFFFS 348
            EY+E  RKRKARK+RIEN LDMLC+FTGI ILFSF SF+FF S
Sbjct: 308 EEYEEMKRKRKARKERIENGLDMLCIFTGIAILFSFSSFIFFSS 345

[Close]

BLAST of Sed0025213 vs. NCBI nr
Match: XP_022944112.1 (probable F-box protein At2g36090 [Cucurbita moschata])

HSP 1 Score: 513.8 bits (1322), Expect = 1.1e-141
Identity = 262/345 (75.94%), Postives = 290/345 (84.06%), Query Frame = 0


Query: 2   PASFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWR 61
           P S HH PS A DDG AI ALHSDILQTHILTRLDGAALTSAA AS RFRRLS ED LWR
Sbjct: 35  PYSSHHPPSAADDDGDAIVALHSDILQTHILTRLDGAALTSAASASSRFRRLSREDLLWR 94

Query: 62  QICSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELIS 121
           ++CS SWPS THPRV  AIS FPS+HRSFFSDVFPVLDCRSLRCDL+R  SSS TSELIS
Sbjct: 95  RVCSTSWPSTTHPRVQQAISAFPSEHRSFFSDVFPVLDCRSLRCDLNRSSSSS-TSELIS 154

Query: 122 AVDIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEE 181
           AVDIHY+DKL+FSKV  IET+TNWFL SPFRVDL+DPKDS P PI+R EKYE+W+GH+EE
Sbjct: 155 AVDIHYKDKLLFSKVDSIETKTNWFLGSPFRVDLIDPKDSIPSPIRRTEKYEDWLGHLEE 214

Query: 182 NLRVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCA 241
           NL VSWI+IDPI NRA NVSSRQAVK +  WLSG+I+V+YTTVMGGDGR GS  E+V+CA
Sbjct: 215 NLTVSWIVIDPIKNRAANVSSRQAVKARWQWLSGDIEVEYTTVMGGDGRIGSAEEMVECA 274

Query: 242 VVVSCGER-AEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPK 301
           VVVSCGE+  E G+EMSV EVS++MLDM GKHL GKES+ ILGEAME+G RIR  K E K
Sbjct: 275 VVVSCGEKEEEEGMEMSVREVSMRMLDMEGKHLKGKESMEILGEAMERGKRIRGKKWEGK 334

Query: 302 LRFTEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFF 346
           LRF EY+E  R RKARK+R ENALDMLC+FTGI ILFSF SF  F
Sbjct: 335 LRFREYEERRRLRKARKERTENALDMLCIFTGIAILFSFCSFFLF 378

[Close]

BLAST of Sed0025213 vs. NCBI nr
Match: KAG7010341.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 513.5 bits (1321), Expect = 1.5e-141
Identity = 261/345 (75.65%), Postives = 291/345 (84.35%), Query Frame = 0


Query: 2   PASFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWR 61
           P S HH PS A DDG AI ALHSDILQTHILTRLDGAALTSAA AS RFRRLS+ED LWR
Sbjct: 35  PYSSHHPPSAADDDGDAIVALHSDILQTHILTRLDGAALTSAASASSRFRRLSSEDLLWR 94

Query: 62  QICSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELIS 121
           ++CS SWPS THPRV  AIS FPS+HRSFFSDVFPVLDCRSLRCDL+R   SS TSELIS
Sbjct: 95  RVCSTSWPSTTHPRVQQAISAFPSEHRSFFSDVFPVLDCRSLRCDLNRSSCSS-TSELIS 154

Query: 122 AVDIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEE 181
           AVDIHY+DKL+FSKV  IET+TNWFL SPFRVDL+DPKDS P PI+R EKYE+W+GH+EE
Sbjct: 155 AVDIHYKDKLLFSKVHSIETKTNWFLGSPFRVDLIDPKDSIPSPIRRTEKYEDWLGHLEE 214

Query: 182 NLRVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCA 241
           NL VSWI+IDPI NRA NVSSRQAVK +  WLSG+I+V+YTTVMGGDGR GS  E+V+CA
Sbjct: 215 NLTVSWIVIDPIKNRAANVSSRQAVKARWQWLSGDIEVEYTTVMGGDGRIGSAEEMVECA 274

Query: 242 VVVSCGERAEH-GVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPK 301
           VVVSCGE+ E  G+EMSV EVS++MLDM GKHL GKES++ILGEAME+G RIR  K E K
Sbjct: 275 VVVSCGEKEEEKGMEMSVREVSMRMLDMEGKHLKGKESMKILGEAMERGKRIRGKKWEGK 334

Query: 302 LRFTEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFF 346
           LRF EY+E  R RKARK+R ENALDMLC+FTGI ILFSF SF  F
Sbjct: 335 LRFREYEERRRLRKARKERTENALDMLCIFTGIAILFSFCSFFLF 378

[Close]

BLAST of Sed0025213 vs. ExPASy Swiss-Prot
Match: Q9SIH5 (Probable F-box protein At2g36090 OS=Arabidopsis thaliana OX=3702 GN=At2g36090 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-64
Identity = 146/338 (43.20%), Postives = 201/338 (59.47%), Query Frame = 0


Query: 1   MPASFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLW 60
           M  S    PST   D   I+ +H DI+++HILTRLDGA L S +CAS     L++ + LW
Sbjct: 1   MANSSSFSPSTTVTD--LISTVHDDIIESHILTRLDGATLASVSCASSHLHHLASNEILW 60

Query: 61  RQICSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDR-FPSSSWTSEL 120
            +IC ++WPS +               RSFFSD + +++      DLDR FP      EL
Sbjct: 61  SKICRSTWPSCS------------GGSRSFFSDAYSMVETAGTVSDLDRPFP------EL 120

Query: 121 ISAVDIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHI 180
           ISAVD+HY  KL+FS+V   ET T WF  SP R+DL+D KD+   PIKR ++ E+    +
Sbjct: 121 ISAVDLHYRGKLIFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDL 180

Query: 181 EENLRVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQ 240
           E++L +SWI+IDPI  RA N+SS + V VQR+W+SGE++ Q+ TV+G           V+
Sbjct: 181 EKDLTLSWIVIDPIGKRAANISSHRPVSVQRNWISGEVEAQFATVVGA----------VE 240

Query: 241 CAV-VVSCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKG- 300
           C + VV+CGE      EM V EVSL++  M G HLNG++SL IL   ME G R+  ++  
Sbjct: 241 CVITVVTCGEE-----EMHVREVSLKVEKMEGTHLNGRDSLVILRSVME-GKRVNGSRRE 300

Query: 301 -EPKLRFTEYQEFTRKRKARKDRIENALDMLCVFTGIL 335
            E K R  E+ E  R+ K +K R+E+  D+L V  GIL
Sbjct: 301 VESKKRHEEFMEKKREMKEKKMRVESVFDILTVAFGIL 302

[Close]

BLAST of Sed0025213 vs. ExPASy Swiss-Prot
Match: Q9XIN8 (F-box protein At2g27310 OS=Arabidopsis thaliana OX=3702 GN=At2g27310 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.0e-60
Identity = 140/349 (40.11%), Postives = 207/349 (59.31%), Query Frame = 0


Query: 15  DGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQICSASWPSITHP 74
           +G +I+ LHSDI+QT ILTRLDG  L S A  S   + L  E++LW+++   +WPSI  P
Sbjct: 8   NGDSISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTLCTEEKLWQELSIDTWPSINDP 67

Query: 75  RVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSE-------LISAVDIHY 134
           RV  AIS FPS +RSFF+D +P             F   +W SE       LISAVD++Y
Sbjct: 68  RVVQAISSFPSGYRSFFADSYP-------------FTEHTWQSEKHDPPTGLISAVDLYY 127

Query: 135 EDKLVFSKVQPIETE---TNWFLYSPFRVDLMDPKDSTPWPIK-RAEKYEEWVGHIEENL 194
             ++++SKVQ +ETE   + WFL SPFRVD++DPK+S    I+     YE WV  +EE++
Sbjct: 128 RGEIIYSKVQEMETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESM 187

Query: 195 RVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVV 254
           +++WI+IDPI  RA N+SSR+AV  +R+WL+G+++++++TV+         AE  + A V
Sbjct: 188 KLNWILIDPIKKRAANISSRKAVSARRNWLTGDLEIRFSTVV--------TAEAAEVAAV 247

Query: 255 VSCGER-------AEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANK 314
           VSCG          E G E+ V +V LQ+ D+ GK + G++SL IL + +  G R   + 
Sbjct: 248 VSCGSAEAWKEVDEEVGGEIHVRDVRLQVEDIEGKCMKGRDSLVIL-QGLLDGKRSCKDD 307

Query: 315 GE--PKLRFTEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFL 344
            E   K R+ EY     + +  K+R E A D +C+  G  +    +SF+
Sbjct: 308 EERRAKERYEEYVRMKIQWRENKERREKAQDTICMIFGFSMFVLLWSFI 334

[Close]

BLAST of Sed0025213 vs. ExPASy Swiss-Prot
Match: Q2V3R1 (F-box protein At3g44326 OS=Arabidopsis thaliana OX=3702 GN=At3g44326 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 5.2e-57
Identity = 137/344 (39.83%), Postives = 197/344 (57.27%), Query Frame = 0


Query: 8   RPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQICSAS 67
           +PS     G  I A+ SD+L+++ILTRLDG++L + +C         +++ LWRQ CSA+
Sbjct: 12  QPSRGGSPG--INAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSFCSDESLWRQQCSAT 71

Query: 68  WPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAVDIHY 127
           WPS +  RV   IS FP  HR+FFSD FP L+   +  +L   P S  TSELISAVDI Y
Sbjct: 72  WPSTSDTRVQSIISTFPDGHRTFFSDSFPFLE-HDVGINL---PPSVDTSELISAVDIFY 131

Query: 128 EDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAE--KYEEWVGHIEENLRV 187
           +D ++FS+V   ET + WFL SP RVDL++PK+  P  +   +  K + W   +EENL +
Sbjct: 132 KDDVIFSRVHVTETVSGWFLCSPMRVDLVEPKELIPTRVLVTDQCKDDTWKSDLEENLSL 191

Query: 188 SWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTV-MGGDGRAGSRAELVQCAVVV 247
           SWI+IDP   RA +VS+R+ V V RHWL+GE+ V+++++ + G+ +   + E     V+ 
Sbjct: 192 SWILIDPTCKRAADVSTRKPVSVHRHWLTGEVHVKFSSIFVVGNKKRSEQVEFTVTVVLA 251

Query: 248 SCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRA-NKGEPKLRF 307
               R E    M + EVSL   D  G++L GK SL IL  AM    R RA  + E K ++
Sbjct: 252 VFNRREEETAVMQIREVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGGEEEGKEKY 311

Query: 308 TEYQEFTRKRKARKDR--IENALDMLCVFTGILILFSFFSFLFF 346
            EY E    +   K R   E A++    +  +L+L     F  F
Sbjct: 312 IEYMERKTAKAEMKWRRGKETAMETAACWIAVLLLGFLLCFYLF 349

[Close]

BLAST of Sed0025213 vs. ExPASy TrEMBL
Match: A0A5A7V0L4 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00970 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 2.0e-144
Identity = 267/344 (77.62%), Postives = 297/344 (86.34%), Query Frame = 0


Query: 4   SFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQI 63
           SFHHR S  A+D  AIAALHSDILQTHILTRLDGAALTS A  S RFRRLS+EDQLWR++
Sbjct: 8   SFHHRSS--AED--AIAALHSDILQTHILTRLDGAALTSTASTSSRFRRLSSEDQLWRRV 67

Query: 64  CSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAV 123
           CS SWPSITHP++   IS FPSKH+SFFSDVFPVLDC SLRCDLD   SS  T+ELISAV
Sbjct: 68  CSTSWPSITHPKLQQLISTFPSKHQSFFSDVFPVLDCCSLRCDLDYRCSS--TAELISAV 127

Query: 124 DIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEENL 183
           DIHY++KL+FSKV  IETETNWFL SPFRVDL+DPKDS P PI+R+EKYE+W+GH+EENL
Sbjct: 128 DIHYKNKLLFSKVHSIETETNWFLCSPFRVDLIDPKDSIPSPIRRSEKYEDWLGHLEENL 187

Query: 184 RVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVV 243
            VSWIIIDPINNRA N+SSRQ VKV+RHWLSGEIQVQYTTVMGGD RAGS  E+V+CAVV
Sbjct: 188 TVSWIIIDPINNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVV 247

Query: 244 VSCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPKLRF 303
           VSCGE+ E G+EMSVTEVS+QMLDM GKHLNGKESL IL EAMEKG RIR  KG+ KLR+
Sbjct: 248 VSCGEKEEEGMEMSVTEVSMQMLDMEGKHLNGKESLGILREAMEKGKRIRGRKGDGKLRY 307

Query: 304 TEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFFFS 348
            EY+E  RKRKARK+RIEN LDMLC+FTGI ILFSF SF+FF S
Sbjct: 308 EEYEEMKRKRKARKERIENGLDMLCIFTGIAILFSFSSFIFFSS 345

[Close]

BLAST of Sed0025213 vs. ExPASy TrEMBL
Match: A0A5D3BCW0 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00170 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 2.0e-144
Identity = 267/344 (77.62%), Postives = 297/344 (86.34%), Query Frame = 0


Query: 4   SFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQI 63
           SFHHR S  A+D  AIAALHSDILQTHILTRLDGAALTS A  S RFRRLS+EDQLWR++
Sbjct: 9   SFHHRSS--AED--AIAALHSDILQTHILTRLDGAALTSTASTSSRFRRLSSEDQLWRRV 68

Query: 64  CSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAV 123
           CS SWPSITHP++   IS FPSKH+SFFSDVFPVLDC SLRCDLD   SS  T+ELISAV
Sbjct: 69  CSTSWPSITHPKLQQLISTFPSKHQSFFSDVFPVLDCCSLRCDLDYRYSS--TAELISAV 128

Query: 124 DIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEENL 183
           DIHY++KL+FSKV  IETETNWFL SPFRVDL+DPKDS P PI+R+EKYE+W+GH+EENL
Sbjct: 129 DIHYKNKLLFSKVHSIETETNWFLCSPFRVDLIDPKDSIPSPIRRSEKYEDWLGHLEENL 188

Query: 184 RVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVV 243
            VSWIIIDPINNRA N+SSRQ VKV+RHWLSGEIQVQYTTVMGGD RAGS  E+V+CAVV
Sbjct: 189 TVSWIIIDPINNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVV 248

Query: 244 VSCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPKLRF 303
           VSCGE+ E G+EMSVTEVS+QMLDM GKHLNGKESL IL EAMEKG RIR  KG+ KLR+
Sbjct: 249 VSCGEKEEEGMEMSVTEVSMQMLDMEGKHLNGKESLGILREAMEKGKRIRGRKGDGKLRY 308

Query: 304 TEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFFFS 348
            EY+E  RKRKARK+RIEN LDMLC+FTGI ILFSF SF+FF S
Sbjct: 309 EEYEEMKRKRKARKERIENGLDMLCIFTGIAILFSFSSFIFFSS 346

[Close]

BLAST of Sed0025213 vs. ExPASy TrEMBL
Match: A0A6J1FUW4 (probable F-box protein At2g36090 OS=Cucurbita moschata OX=3662 GN=LOC111448660 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 5.4e-142
Identity = 262/345 (75.94%), Postives = 290/345 (84.06%), Query Frame = 0


Query: 2   PASFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWR 61
           P S HH PS A DDG AI ALHSDILQTHILTRLDGAALTSAA AS RFRRLS ED LWR
Sbjct: 35  PYSSHHPPSAADDDGDAIVALHSDILQTHILTRLDGAALTSAASASSRFRRLSREDLLWR 94

Query: 62  QICSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELIS 121
           ++CS SWPS THPRV  AIS FPS+HRSFFSDVFPVLDCRSLRCDL+R  SSS TSELIS
Sbjct: 95  RVCSTSWPSTTHPRVQQAISAFPSEHRSFFSDVFPVLDCRSLRCDLNRSSSSS-TSELIS 154

Query: 122 AVDIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEE 181
           AVDIHY+DKL+FSKV  IET+TNWFL SPFRVDL+DPKDS P PI+R EKYE+W+GH+EE
Sbjct: 155 AVDIHYKDKLLFSKVDSIETKTNWFLGSPFRVDLIDPKDSIPSPIRRTEKYEDWLGHLEE 214

Query: 182 NLRVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCA 241
           NL VSWI+IDPI NRA NVSSRQAVK +  WLSG+I+V+YTTVMGGDGR GS  E+V+CA
Sbjct: 215 NLTVSWIVIDPIKNRAANVSSRQAVKARWQWLSGDIEVEYTTVMGGDGRIGSAEEMVECA 274

Query: 242 VVVSCGER-AEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPK 301
           VVVSCGE+  E G+EMSV EVS++MLDM GKHL GKES+ ILGEAME+G RIR  K E K
Sbjct: 275 VVVSCGEKEEEEGMEMSVREVSMRMLDMEGKHLKGKESMEILGEAMERGKRIRGKKWEGK 334

Query: 302 LRFTEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFF 346
           LRF EY+E  R RKARK+R ENALDMLC+FTGI ILFSF SF  F
Sbjct: 335 LRFREYEERRRLRKARKERTENALDMLCIFTGIAILFSFCSFFLF 378

[Close]

BLAST of Sed0025213 vs. ExPASy TrEMBL
Match: A0A6J1JFV7 (probable F-box protein At2g36090 OS=Cucurbita maxima OX=3661 GN=LOC111484036 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 6.0e-141
Identity = 262/352 (74.43%), Postives = 292/352 (82.95%), Query Frame = 0


Query: 2   PASFHHRPSTAA------DDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSA 61
           P +FHH PS AA      DDG AI ALHSDILQTHILTRLDGAALTSAA AS RFRRLS 
Sbjct: 35  PYTFHHPPSAAAAPAAADDDGDAIVALHSDILQTHILTRLDGAALTSAASASSRFRRLSR 94

Query: 62  EDQLWRQICSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSW 121
           EDQLWR++CS SWPS THPRV  AIS FPS+HRSFFSDVFPVLDCRSLRCDL+R  SSS 
Sbjct: 95  EDQLWRRVCSTSWPSTTHPRVQQAISAFPSEHRSFFSDVFPVLDCRSLRCDLNRSSSSS- 154

Query: 122 TSELISAVDIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEW 181
           TSELISAVDIHY+DKL+FSKV  IET+TNWFL SPFRVDL+DPKDS P PI+R EKYE+W
Sbjct: 155 TSELISAVDIHYKDKLLFSKVHSIETKTNWFLGSPFRVDLIDPKDSIPSPIRRTEKYEDW 214

Query: 182 VGHIEENLRVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRA 241
           +GH+EENL VSWI+IDPI NRA NVSSRQ VK +  WLSG+I+V+YTTVMGGDGR GS  
Sbjct: 215 LGHLEENLTVSWIVIDPIKNRAANVSSRQPVKARWQWLSGDIEVEYTTVMGGDGRIGSAE 274

Query: 242 ELVQCAVVVSCGER--AEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIR 301
           E+V+CAVVVSCGE+   E G++MSV EVS++MLDM GKHL GKES+ ILGEAME+G RIR
Sbjct: 275 EMVECAVVVSCGEKEEEEEGMKMSVREVSMRMLDMEGKHLKGKESMEILGEAMERGKRIR 334

Query: 302 ANKGEPKLRFTEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFLFF 346
             K E KLRF EY+E  R RKARK+R ENALD LC+FTGI ILFSF SF FF
Sbjct: 335 GKKWEGKLRFREYEERRRLRKARKERTENALDTLCIFTGIAILFSFCSFFFF 385

[Close]

BLAST of Sed0025213 vs. ExPASy TrEMBL
Match: A0A1S4DYD6 (probable F-box protein At1g60180 OS=Cucumis melo OX=3656 GN=LOC107991005 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.3e-138
Identity = 254/329 (77.20%), Postives = 283/329 (86.02%), Query Frame = 0


Query: 4   SFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQI 63
           SFHHR S  A+D  AIAALHSDILQTHILTRLDGAALTS A  S RFRRLS+EDQLWR++
Sbjct: 9   SFHHRSS--AED--AIAALHSDILQTHILTRLDGAALTSTASTSSRFRRLSSEDQLWRRV 68

Query: 64  CSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAV 123
           CS SWPSITHP++   IS FPSKH+SFFSDVFPVLDC SLRCDLD   SS  T+ELISAV
Sbjct: 69  CSTSWPSITHPKLQQLISTFPSKHQSFFSDVFPVLDCCSLRCDLDYRYSS--TAELISAV 128

Query: 124 DIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHIEENL 183
           DIHY++KL+FSKV  IETETNWFL SPFRVDL+DPKDS P PI+R+EKYE+W+GH+EENL
Sbjct: 129 DIHYKNKLLFSKVHSIETETNWFLCSPFRVDLIDPKDSIPSPIRRSEKYEDWLGHLEENL 188

Query: 184 RVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVV 243
            VSWIIIDPINNRA N+SSRQ VKV+RHWLSGEIQVQYTTVMGGD RAGS  E+V+CAVV
Sbjct: 189 TVSWIIIDPINNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVV 248

Query: 244 VSCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKGEPKLRF 303
           VSCGE+ E G+EMSVTEVS+QMLDM GKHLNGKESL IL EAMEKG RIR  KG+ KLR+
Sbjct: 249 VSCGEKEEEGMEMSVTEVSMQMLDMEGKHLNGKESLGILREAMEKGKRIRGRKGDGKLRY 308

Query: 304 TEYQEFTRKRKARKDRIENALDMLCVFTG 333
            EY+E  RKRKARK+RIEN LDMLC  +G
Sbjct: 309 EEYEEMKRKRKARKERIENGLDMLCRSSG 331

[Close]

BLAST of Sed0025213 vs. TAIR 10
Match: AT2G36090.1 (F-box family protein )

HSP 1 Score: 248.4 bits (633), Expect = 8.2e-66
Identity = 146/338 (43.20%), Postives = 201/338 (59.47%), Query Frame = 0


Query: 1   MPASFHHRPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLW 60
           M  S    PST   D   I+ +H DI+++HILTRLDGA L S +CAS     L++ + LW
Sbjct: 1   MANSSSFSPSTTVTD--LISTVHDDIIESHILTRLDGATLASVSCASSHLHHLASNEILW 60

Query: 61  RQICSASWPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDR-FPSSSWTSEL 120
            +IC ++WPS +               RSFFSD + +++      DLDR FP      EL
Sbjct: 61  SKICRSTWPSCS------------GGSRSFFSDAYSMVETAGTVSDLDRPFP------EL 120

Query: 121 ISAVDIHYEDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAEKYEEWVGHI 180
           ISAVD+HY  KL+FS+V   ET T WF  SP R+DL+D KD+   PIKR ++ E+    +
Sbjct: 121 ISAVDLHYRGKLIFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDL 180

Query: 181 EENLRVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQ 240
           E++L +SWI+IDPI  RA N+SS + V VQR+W+SGE++ Q+ TV+G           V+
Sbjct: 181 EKDLTLSWIVIDPIGKRAANISSHRPVSVQRNWISGEVEAQFATVVGA----------VE 240

Query: 241 CAV-VVSCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANKG- 300
           C + VV+CGE      EM V EVSL++  M G HLNG++SL IL   ME G R+  ++  
Sbjct: 241 CVITVVTCGEE-----EMHVREVSLKVEKMEGTHLNGRDSLVILRSVME-GKRVNGSRRE 300

Query: 301 -EPKLRFTEYQEFTRKRKARKDRIENALDMLCVFTGIL 335
            E K R  E+ E  R+ K +K R+E+  D+L V  GIL
Sbjct: 301 VESKKRHEEFMEKKREMKEKKMRVESVFDILTVAFGIL 302

[Close]

BLAST of Sed0025213 vs. TAIR 10
Match: AT2G27310.1 (F-box family protein )

HSP 1 Score: 235.3 bits (599), Expect = 7.2e-62
Identity = 140/349 (40.11%), Postives = 207/349 (59.31%), Query Frame = 0


Query: 15  DGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQICSASWPSITHP 74
           +G +I+ LHSDI+QT ILTRLDG  L S A  S   + L  E++LW+++   +WPSI  P
Sbjct: 8   NGDSISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTLCTEEKLWQELSIDTWPSINDP 67

Query: 75  RVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSE-------LISAVDIHY 134
           RV  AIS FPS +RSFF+D +P             F   +W SE       LISAVD++Y
Sbjct: 68  RVVQAISSFPSGYRSFFADSYP-------------FTEHTWQSEKHDPPTGLISAVDLYY 127

Query: 135 EDKLVFSKVQPIETE---TNWFLYSPFRVDLMDPKDSTPWPIK-RAEKYEEWVGHIEENL 194
             ++++SKVQ +ETE   + WFL SPFRVD++DPK+S    I+     YE WV  +EE++
Sbjct: 128 RGEIIYSKVQEMETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESM 187

Query: 195 RVSWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTVMGGDGRAGSRAELVQCAVV 254
           +++WI+IDPI  RA N+SSR+AV  +R+WL+G+++++++TV+         AE  + A V
Sbjct: 188 KLNWILIDPIKKRAANISSRKAVSARRNWLTGDLEIRFSTVV--------TAEAAEVAAV 247

Query: 255 VSCGER-------AEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRANK 314
           VSCG          E G E+ V +V LQ+ D+ GK + G++SL IL + +  G R   + 
Sbjct: 248 VSCGSAEAWKEVDEEVGGEIHVRDVRLQVEDIEGKCMKGRDSLVIL-QGLLDGKRSCKDD 307

Query: 315 GE--PKLRFTEYQEFTRKRKARKDRIENALDMLCVFTGILILFSFFSFL 344
            E   K R+ EY     + +  K+R E A D +C+  G  +    +SF+
Sbjct: 308 EERRAKERYEEYVRMKIQWRENKERREKAQDTICMIFGFSMFVLLWSFI 334

[Close]

BLAST of Sed0025213 vs. TAIR 10
Match: AT3G44326.1 (F-box family protein )

HSP 1 Score: 223.0 bits (567), Expect = 3.7e-58
Identity = 137/344 (39.83%), Postives = 197/344 (57.27%), Query Frame = 0


Query: 8   RPSTAADDGGAIAALHSDILQTHILTRLDGAALTSAACASYRFRRLSAEDQLWRQICSAS 67
           +PS     G  I A+ SD+L+++ILTRLDG++L + +C         +++ LWRQ CSA+
Sbjct: 12  QPSRGGSPG--INAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSFCSDESLWRQQCSAT 71

Query: 68  WPSITHPRVWHAISEFPSKHRSFFSDVFPVLDCRSLRCDLDRFPSSSWTSELISAVDIHY 127
           WPS +  RV   IS FP  HR+FFSD FP L+   +  +L   P S  TSELISAVDI Y
Sbjct: 72  WPSTSDTRVQSIISTFPDGHRTFFSDSFPFLE-HDVGINL---PPSVDTSELISAVDIFY 131

Query: 128 EDKLVFSKVQPIETETNWFLYSPFRVDLMDPKDSTPWPIKRAE--KYEEWVGHIEENLRV 187
           +D ++FS+V   ET + WFL SP RVDL++PK+  P  +   +  K + W   +EENL +
Sbjct: 132 KDDVIFSRVHVTETVSGWFLCSPMRVDLVEPKELIPTRVLVTDQCKDDTWKSDLEENLSL 191

Query: 188 SWIIIDPINNRAGNVSSRQAVKVQRHWLSGEIQVQYTTV-MGGDGRAGSRAELVQCAVVV 247
           SWI+IDP   RA +VS+R+ V V RHWL+GE+ V+++++ + G+ +   + E     V+ 
Sbjct: 192 SWILIDPTCKRAADVSTRKPVSVHRHWLTGEVHVKFSSIFVVGNKKRSEQVEFTVTVVLA 251

Query: 248 SCGERAEHGVEMSVTEVSLQMLDMGGKHLNGKESLRILGEAMEKGNRIRA-NKGEPKLRF 307
               R E    M + EVSL   D  G++L GK SL IL  AM    R RA  + E K ++
Sbjct: 252 VFNRREEETAVMQIREVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGGEEEGKEKY 311

Query: 308 TEYQEFTRKRKARKDR--IENALDMLCVFTGILILFSFFSFLFF 346
            EY E    +   K R   E A++    +  +L+L     F  F
Sbjct: 312 IEYMERKTAKAEMKWRRGKETAMETAACWIAVLLLGFLLCFYLF 349

The following BLAST results are available for this feature:

BLAST of Sed0025213 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900570.1	4.9e-145	77.94	probable F-box protein At2g36090 [Benincasa hispida]	[more]
TYJ96058.1	4.1e-144	77.62	putative F-box protein [Cucumis melo var. makuwa]	[more]
KAA0061722.1	4.1e-144	77.62	putative F-box protein [Cucumis melo var. makuwa]	[more]
XP_022944112.1	1.1e-141	75.94	probable F-box protein At2g36090 [Cucurbita moschata]	[more]
KAG7010341.1	1.5e-141	75.65	F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0025213 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIH5	1.2e-64	43.20	Probable F-box protein At2g36090 OS=Arabidopsis thaliana OX=3702 GN=At2g36090 PE...	[more]
Q9XIN8	1.0e-60	40.11	F-box protein At2g27310 OS=Arabidopsis thaliana OX=3702 GN=At2g27310 PE=2 SV=1	[more]
Q2V3R1	5.2e-57	39.83	F-box protein At3g44326 OS=Arabidopsis thaliana OX=3702 GN=At3g44326 PE=2 SV=1	[more]

BLAST of Sed0025213 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0L4	2.0e-144	77.62	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A5D3BCW0	2.0e-144	77.62	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A6J1FUW4	5.4e-142	75.94	probable F-box protein At2g36090 OS=Cucurbita moschata OX=3662 GN=LOC111448660 P...	[more]
A0A6J1JFV7	6.0e-141	74.43	probable F-box protein At2g36090 OS=Cucurbita maxima OX=3661 GN=LOC111484036 PE=...	[more]
A0A1S4DYD6	1.3e-138	77.20	probable F-box protein At1g60180 OS=Cucumis melo OX=3656 GN=LOC107991005 PE=4 SV...	[more]

BLAST of Sed0025213 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36090.1	8.2e-66	43.20	F-box family protein	[more]
AT2G27310.1	7.2e-62	40.11	F-box family protein	[more]
AT3G44326.1	3.7e-58	39.83	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 17..128 e-value: 1.2E-6 score: 30.4
None	No IPR available	PANTHER	PTHR33736:SF18	F-BOX PLANT-LIKE PROTEIN	coord: 17..342
None	No IPR available	PANTHER	PTHR33736	F-BOX PROTEIN-RELATED	coord: 17..342
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 14..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025213.1	Sed0025213.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding