Sed0025141 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGCGTTGCAGTTGCAGTTCCAATTTCAATCTCGCTTTCAAGTCTCCAAGATTTTGTCTTCAACAATCTCGCTGATCCATCATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGCTGCAATCTCGCCGTTTTAGCTCCAATTCCATGGCCGACGATCCAGATCTCTCAAATGATCGGAATCAGCGATTTGATCAACATTCCGAAGGTACATCGTTTCAATTTGCAAATGAACGCTCAATTTCGCTGCAATTGAGTGAGTCTTTGTCTCATAAGGGTTTTAGTTTTCCTGAAAATTTTAAGCTGAATACTGATAATCATAGCAGTAGTGGTAGTAAGGAGAAGATCGAGCAGAGCTATCCTCGTCGGTTTTCGCAACCGCGGCGTCCACCAGAGGCCGATGAGTTGTTCGAGAAAATGAAGGAGACGGGTCTAATTCCCAATGCTGTTGCCATGATCAATGGGCTTTGTGAAGATCAGCTCATCCAAGAAGCAATGGAACTCCTTGGTTTGATTCGTGAGGAGGGTACAATTCCATTAGTTGTGATTTACACTGCTGTTGTTGATGGGTTCTGCCAGGCTTGGAAGCACGGACACTTCTATTTTGACAAAGTATTCTTGTCGTATTTGTGTCTGACACCGATACTTCCGGACACTCGTCGGACACGTGTCCAACACTCAAAATTCTGTATCCTTTTTTATTATTATTATTTACAATTTCAGACACTTCACAGACATACCATGGATACTTCATGGACACCTCAATTAAGATTTATTTGTTTCTAATGATGGATGACATGATAACGGGAAGTGTTGGTGGAGGCCATTGACGACGATGTCTATCGAAGATAGATGGACTAAAATGAAAAAAAGGAAAGAAAGAGAAAAAATATAATGGAAAGAAGAAAAATGAGATAAAAACTAAAATATTTTGAGATTGTTATGGATAGGCTTAATAAGTAACTAAAATATTTTGGATTTCATCTTTTAATAGTATATTATAAAAAACAATAATAAATCACGGGTTCTCGACGTATCCGTATCCAACATTTTTAAATAATGGCGTGTCTACGTATCCGTGTCGTGTCTGTATCTCGTGTCCGTGTCCGTGCTTCTTAACTGCCAGGCTGAGAAGCCTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAGCAATGGCATTTCTCCCAATGCTTTCAGTTTTGGGGTGTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGGGGCTGTAGCATTTGGCATTGAGATGTTGGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTTGGGTTGATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTAAGAGGGTTATAGAAACCTTTAAGCAAAAGGTATCCTTGATTGATGAGAAAGCCTTAAGATATTGTTTGAATAAAAGAGCCTCAGTTTCTCCAACTGTCTGGAAAGAGATCTTTGGGAAGAAAACAAAGGAATTTTTCTGAGATTGTTGTTGTAGACTCGTAGTTATAAAAAGCTGTAAGTCTTCTTTCTTTTCCCTTTTATGTAATTCCTTCGTTTAAGATCTGCTTACCTTAAAATTATATAATTTGAGTTCATGACATGCATGTTTACAATGGAAAGTTCCTTGATCTTTTGATAGTATCTACAAGTTTGTACGAATTGTTCGGTACAAAATTTTAAGGTATAAAATTAGGAAAATATAGCTTGTTTGTTACTTTTGTCTTTACCATCTATTATACCTTAAAATTTTAAAAGGTTAAGTACGGTTTTATTAAAAAACAATTATGCCATTAGCATTCTAGGATGATTATGATTTACAGAAATGGTGGTTGATAACTTGAATGTATTGCTGCCAGCCTGCCACTATTTGGGATATCATCAAAAAGGCATTCTCCTGGTGCATAACTTTACCAAAAGATCCAATCAATATGTTCGCTCAAACTCTATTGAATCACCCGTTCAAGAACGATAAGAAGAGATTGCTATGGGAATATTTCATCAAGGCTTTTTGTTGGAGCGTCTGGTTGGAGAGGAATAATAGGATCTTCAAAGACAAAGCTACCCCCTCTAGATCGTTTCATTGAATGCTTAACCTACACCGTGGTGACCTGGTGTAAATTATCGTCTTTATTTTGTGACTATAGTTATGATGCTCTCATCCGTAATTGGAGAGCTTTATTATAAAGGCTTTTTGTATTTTGAAATTTCATACCATTAATGAAATTGTTTCTTATCCAAAAAAAAAAAAGATAACTCGAATGTAACCTTTTAGGAGCTTTTTGTGATTTAACTGTTACTTATGTTGAGTCGTTGACATAGACTTCTTTTATCTTAATCTTTCATCCTCCCCACCCTCATTTTCTCTTTGGAGGTGTTTGGGGCAAGGAGAATAAGAATGATTATGAGAAATAATTCTCTTATCTATGTTTGGGCCACCCACAATCATTCTCCCAGTTCCCTAATCACTTTTCATGCTCCCCATACAATCACAATTTTGTTTCCCATCGTCATTCTCTACACTCCAAACATAGATAATTATTCTCTACACCCTAAACACAGATGGTCATTCTCTCTATAATCATTTTCTTCACCCCAAATATAGATAATCATATTCCTCTGGTCCACCTCAAAGCCTATTGCACGAATCACTCATGAGTACCCAAACGTAAAGCCAGCCCAACCTAATAACCTAGGCAATAGATAAGCACACACGTTAACAGCTTCCAAAGTCGCTCACATAAGGATATAAGAAAGAATTTAGGTGTAGTTGCTATTCGATTCCCCGACCCTCTCTTTCTCTCATCTTCTTCATCTGCTTCTTTTTATAAACACCAGGCTATGAGTCCAAACTTTTCATGAATAAAATTCATTTTGAGTTCACCTAATTGAAAGGGTTCAAGTTTCCTTTTAATGTTACTCAAAATGTTTTTGTGTGTATCAGCATATTTGTTGGTTGAGATAATTAAATTTACTTCAATCCATGAGCTTAGCCTTTTAGATTGATTGGAGGTTTAACATAATTTAACAATATTCATGATGGTTTTTTACGGAAGCTCCAACCGCAAGTGTCGAACCACCGGTGTATGGTTCGATATGGAAAGAAAATTATCCAAAAAAAAAGTTATGATGTTCTTTCTCTTGGAACGTGCACACAAAGCAATTAATACTCAAGATTTGCTCCAACCATGGCTCCCATACTTGCTTTTGTCTCTTCAACGGTGCGTTCTTTGTGGTCAGGTTCTCCTATGTCAAGCCCTTTGGCATTTCTTCACGTCTTCTCCTCTCACTCGCTCTGGCAGACACCCTTTTAAGAAGGAGATGAAGTATCTTTGGGATTTTTTTTTCGAAACAAGGGTAATAACACCCGTCCCTAGGCCACACACCGAAGACATCGAAAGAGTAATGTCACAGGTGAGTCTCGAACTTGGGACCTTGAAGGGAGCATACCTTCAAAGTCCACGTTGTCAACCACTGTGCCACTTCTTGGGGACAGTATCTTTGGGAGAATTTTATCTGAGCATTTTGTTGGACTACTTGGACGAAAGAAATAAACGATTTTTTCAAGAGTGA ATGGGGGCGTTGCAGTTGCAGTTCCAATTTCAATCTCGCTTTCAAGTCTCCAAGATTTTGTCTTCAACAATCTCGCTGATCCATCATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGCTGCAATCTCGCCGTTTTAGCTCCAATTCCATGGCCGACGATCCAGATCTCTCAAATGATCGGAATCAGCGATTTGATCAACATTCCGAAGGTACATCGTTTCAATTTGCAAATGAACGCTCAATTTCGCTGCAATTGAGTGAGTCTTTGTCTCATAAGGGTTTTAGTTTTCCTGAAAATTTTAAGCTGAATACTGATAATCATAGCAGTAGTGGTAGTAAGGAGAAGATCGAGCAGAGCTATCCTCGTCGGTTTTCGCAACCGCGGCGTCCACCAGAGGCCGATGAGTTGTTCGAGAAAATGAAGGAGACGGGTCTAATTCCCAATGCTGTTGCCATGATCAATGGGCTTTGTGAAGATCAGCTCATCCAAGAAGCAATGGAACTCCTTGGTTTGATTCGTGAGGAGGGTACAATTCCATTAGTTGTGATTTACACTGCTGTTGTTGATGGGTTCTGCCAGGCTTGGAAGCACGGACACTTCTATTTTGACAAAGCTGAGAAGCCTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAGCAATGGCATTTCTCCCAATGCTTTCAGTTTTGGGGTGTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGGGGCTGTAGCATTTGGCATTGAGATGTTGGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTTGGGTTGATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTAAGAGGGTTATAGAAACCTTTAAGCAAAAGGTATCCTTGATTGATGAGAAAGCCTTAAGATATTGTTTGAATAAAAGAGCCTCAGTTTCTCCAACTGAGATGAAGTATCTTTGGGATTTTTTTTTCGAAACAAGGGTAATAACACCCGTCCCTAGGCCACACACCGAAGACATCGAAAGAGTAATGTCACAGGTGAGTCTCGAACTTGGGACCTTGAAGGGAGCATACCTTCAAAGTCCACGTTGTCAACCACTGTGCCACTTCTTGGGGACAGTATCTTTGGGAGAATTTTATCTGAGCATTTTGTTGGACTACTTGGACGAAAGAAATAAACGATTTTTTCAAGAGTGA ATGGGGGCGTTGCAGTTGCAGTTCCAATTTCAATCTCGCTTTCAAGTCTCCAAGATTTTGTCTTCAACAATCTCGCTGATCCATCATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGCTGCAATCTCGCCGTTTTAGCTCCAATTCCATGGCCGACGATCCAGATCTCTCAAATGATCGGAATCAGCGATTTGATCAACATTCCGAAGGTACATCGTTTCAATTTGCAAATGAACGCTCAATTTCGCTGCAATTGAGTGAGTCTTTGTCTCATAAGGGTTTTAGTTTTCCTGAAAATTTTAAGCTGAATACTGATAATCATAGCAGTAGTGGTAGTAAGGAGAAGATCGAGCAGAGCTATCCTCGTCGGTTTTCGCAACCGCGGCGTCCACCAGAGGCCGATGAGTTGTTCGAGAAAATGAAGGAGACGGGTCTAATTCCCAATGCTGTTGCCATGATCAATGGGCTTTGTGAAGATCAGCTCATCCAAGAAGCAATGGAACTCCTTGGTTTGATTCGTGAGGAGGGTACAATTCCATTAGTTGTGATTTACACTGCTGTTGTTGATGGGTTCTGCCAGGCTTGGAAGCACGGACACTTCTATTTTGACAAAGCTGAGAAGCCTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAGCAATGGCATTTCTCCCAATGCTTTCAGTTTTGGGGTGTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGGGGCTGTAGCATTTGGCATTGAGATGTTGGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTTGGGTTGATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTAAGAGGGTTATAGAAACCTTTAAGCAAAAGGTATCCTTGATTGATGAGAAAGCCTTAAGATATTGTTTGAATAAAAGAGCCTCAGTTTCTCCAACTGAGATGAAGTATCTTTGGGATTTTTTTTTCGAAACAAGGGTAATAACACCCGTCCCTAGGCCACACACCGAAGACATCGAAAGAGTAATGTCACAGGTGAGTCTCGAACTTGGGACCTTGAAGGGAGCATACCTTCAAAGTCCACGTTGTCAACCACTGTGCCACTTCTTGGGGACAGTATCTTTGGGAGAATTTTATCTGAGCATTTTGTTGGACTACTTGGACGAAAGAAATAAACGATTTTTTCAAGAGTGA MGALQLQFQFQSRFQVSKILSSTISLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLSNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFFETRVITPVPRPHTEDIERVMSQVSLELGTLKGAYLQSPRCQPLCHFLGTVSLGEFYLSILLDYLDERNKRFFQE Homology
BLAST of Sed0025141 vs. NCBI nr
Match: XP_004144563.1 (pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN43381.1 hypothetical protein Csa_020248 [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 6.5e-101 Identity = 226/369 (61.25%), Postives = 252/369 (68.29%), Query Frame = 0
BLAST of Sed0025141 vs. NCBI nr
Match: XP_023554525.1 (pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554526.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 372.5 bits (955), Expect = 4.6e-99 Identity = 224/375 (59.73%), Postives = 259/375 (69.07%), Query Frame = 0
BLAST of Sed0025141 vs. NCBI nr
Match: XP_008462006.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >XP_008462007.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >KAA0050550.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18790.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 372.5 bits (955), Expect = 4.6e-99 Identity = 223/364 (61.26%), Postives = 249/364 (68.41%), Query Frame = 0
BLAST of Sed0025141 vs. NCBI nr
Match: XP_022136091.1 (pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_022136092.1 pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia]) HSP 1 Score: 370.9 bits (951), Expect = 1.3e-98 Identity = 223/370 (60.27%), Postives = 250/370 (67.57%), Query Frame = 0
BLAST of Sed0025141 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]) HSP 1 Score: 370.2 bits (949), Expect = 2.3e-98 Identity = 221/373 (59.25%), Postives = 255/373 (68.36%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.9e-55 Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q9CAN5 (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.8e-16 Identity = 56/202 (27.72%), Postives = 100/202 (49.50%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.3e-16 Identity = 48/170 (28.24%), Postives = 95/170 (55.88%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.0e-16 Identity = 52/174 (29.89%), Postives = 92/174 (52.87%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2) HSP 1 Score: 87.8 bits (216), Expect = 3.0e-16 Identity = 52/194 (26.80%), Postives = 96/194 (49.48%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A0A0K6C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 3.1e-101 Identity = 226/369 (61.25%), Postives = 252/369 (68.29%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99 Identity = 223/364 (61.26%), Postives = 249/364 (68.41%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99 Identity = 223/364 (61.26%), Postives = 249/364 (68.41%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A6J1C2J3 (pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=3673 GN=LOC111007869 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 6.5e-99 Identity = 223/370 (60.27%), Postives = 250/370 (67.57%), Query Frame = 0
BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98 Identity = 221/373 (59.25%), Postives = 255/373 (68.36%), Query Frame = 0
BLAST of Sed0025141 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 218.0 bits (554), Expect = 1.4e-56 Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 0
BLAST of Sed0025141 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 218.0 bits (554), Expect = 1.4e-56 Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 0
BLAST of Sed0025141 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 107.1 bits (266), Expect = 3.4e-23 Identity = 63/197 (31.98%), Postives = 106/197 (53.81%), Query Frame = 0
BLAST of Sed0025141 vs. TAIR 10
Match: AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-17 Identity = 56/202 (27.72%), Postives = 100/202 (49.50%), Query Frame = 0
BLAST of Sed0025141 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 ) HSP 1 Score: 87.8 bits (216), Expect = 2.1e-17 Identity = 52/194 (26.80%), Postives = 96/194 (49.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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