Sed0025141 (gene) Chayote v1

Overview
NameSed0025141
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG12: 27675725 .. 27679314 (-)
RNA-Seq ExpressionSed0025141
SyntenySed0025141
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCGTTGCAGTTGCAGTTCCAATTTCAATCTCGCTTTCAAGTCTCCAAGATTTTGTCTTCAACAATCTCGCTGATCCATCATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGCTGCAATCTCGCCGTTTTAGCTCCAATTCCATGGCCGACGATCCAGATCTCTCAAATGATCGGAATCAGCGATTTGATCAACATTCCGAAGGTACATCGTTTCAATTTGCAAATGAACGCTCAATTTCGCTGCAATTGAGTGAGTCTTTGTCTCATAAGGGTTTTAGTTTTCCTGAAAATTTTAAGCTGAATACTGATAATCATAGCAGTAGTGGTAGTAAGGAGAAGATCGAGCAGAGCTATCCTCGTCGGTTTTCGCAACCGCGGCGTCCACCAGAGGCCGATGAGTTGTTCGAGAAAATGAAGGAGACGGGTCTAATTCCCAATGCTGTTGCCATGATCAATGGGCTTTGTGAAGATCAGCTCATCCAAGAAGCAATGGAACTCCTTGGTTTGATTCGTGAGGAGGGTACAATTCCATTAGTTGTGATTTACACTGCTGTTGTTGATGGGTTCTGCCAGGCTTGGAAGCACGGACACTTCTATTTTGACAAAGTATTCTTGTCGTATTTGTGTCTGACACCGATACTTCCGGACACTCGTCGGACACGTGTCCAACACTCAAAATTCTGTATCCTTTTTTATTATTATTATTTACAATTTCAGACACTTCACAGACATACCATGGATACTTCATGGACACCTCAATTAAGATTTATTTGTTTCTAATGATGGATGACATGATAACGGGAAGTGTTGGTGGAGGCCATTGACGACGATGTCTATCGAAGATAGATGGACTAAAATGAAAAAAAGGAAAGAAAGAGAAAAAATATAATGGAAAGAAGAAAAATGAGATAAAAACTAAAATATTTTGAGATTGTTATGGATAGGCTTAATAAGTAACTAAAATATTTTGGATTTCATCTTTTAATAGTATATTATAAAAAACAATAATAAATCACGGGTTCTCGACGTATCCGTATCCAACATTTTTAAATAATGGCGTGTCTACGTATCCGTGTCGTGTCTGTATCTCGTGTCCGTGTCCGTGCTTCTTAACTGCCAGGCTGAGAAGCCTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAGCAATGGCATTTCTCCCAATGCTTTCAGTTTTGGGGTGTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGGGGCTGTAGCATTTGGCATTGAGATGTTGGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTTGGGTTGATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTAAGAGGGTTATAGAAACCTTTAAGCAAAAGGTATCCTTGATTGATGAGAAAGCCTTAAGATATTGTTTGAATAAAAGAGCCTCAGTTTCTCCAACTGTCTGGAAAGAGATCTTTGGGAAGAAAACAAAGGAATTTTTCTGAGATTGTTGTTGTAGACTCGTAGTTATAAAAAGCTGTAAGTCTTCTTTCTTTTCCCTTTTATGTAATTCCTTCGTTTAAGATCTGCTTACCTTAAAATTATATAATTTGAGTTCATGACATGCATGTTTACAATGGAAAGTTCCTTGATCTTTTGATAGTATCTACAAGTTTGTACGAATTGTTCGGTACAAAATTTTAAGGTATAAAATTAGGAAAATATAGCTTGTTTGTTACTTTTGTCTTTACCATCTATTATACCTTAAAATTTTAAAAGGTTAAGTACGGTTTTATTAAAAAACAATTATGCCATTAGCATTCTAGGATGATTATGATTTACAGAAATGGTGGTTGATAACTTGAATGTATTGCTGCCAGCCTGCCACTATTTGGGATATCATCAAAAAGGCATTCTCCTGGTGCATAACTTTACCAAAAGATCCAATCAATATGTTCGCTCAAACTCTATTGAATCACCCGTTCAAGAACGATAAGAAGAGATTGCTATGGGAATATTTCATCAAGGCTTTTTGTTGGAGCGTCTGGTTGGAGAGGAATAATAGGATCTTCAAAGACAAAGCTACCCCCTCTAGATCGTTTCATTGAATGCTTAACCTACACCGTGGTGACCTGGTGTAAATTATCGTCTTTATTTTGTGACTATAGTTATGATGCTCTCATCCGTAATTGGAGAGCTTTATTATAAAGGCTTTTTGTATTTTGAAATTTCATACCATTAATGAAATTGTTTCTTATCCAAAAAAAAAAAAGATAACTCGAATGTAACCTTTTAGGAGCTTTTTGTGATTTAACTGTTACTTATGTTGAGTCGTTGACATAGACTTCTTTTATCTTAATCTTTCATCCTCCCCACCCTCATTTTCTCTTTGGAGGTGTTTGGGGCAAGGAGAATAAGAATGATTATGAGAAATAATTCTCTTATCTATGTTTGGGCCACCCACAATCATTCTCCCAGTTCCCTAATCACTTTTCATGCTCCCCATACAATCACAATTTTGTTTCCCATCGTCATTCTCTACACTCCAAACATAGATAATTATTCTCTACACCCTAAACACAGATGGTCATTCTCTCTATAATCATTTTCTTCACCCCAAATATAGATAATCATATTCCTCTGGTCCACCTCAAAGCCTATTGCACGAATCACTCATGAGTACCCAAACGTAAAGCCAGCCCAACCTAATAACCTAGGCAATAGATAAGCACACACGTTAACAGCTTCCAAAGTCGCTCACATAAGGATATAAGAAAGAATTTAGGTGTAGTTGCTATTCGATTCCCCGACCCTCTCTTTCTCTCATCTTCTTCATCTGCTTCTTTTTATAAACACCAGGCTATGAGTCCAAACTTTTCATGAATAAAATTCATTTTGAGTTCACCTAATTGAAAGGGTTCAAGTTTCCTTTTAATGTTACTCAAAATGTTTTTGTGTGTATCAGCATATTTGTTGGTTGAGATAATTAAATTTACTTCAATCCATGAGCTTAGCCTTTTAGATTGATTGGAGGTTTAACATAATTTAACAATATTCATGATGGTTTTTTACGGAAGCTCCAACCGCAAGTGTCGAACCACCGGTGTATGGTTCGATATGGAAAGAAAATTATCCAAAAAAAAAGTTATGATGTTCTTTCTCTTGGAACGTGCACACAAAGCAATTAATACTCAAGATTTGCTCCAACCATGGCTCCCATACTTGCTTTTGTCTCTTCAACGGTGCGTTCTTTGTGGTCAGGTTCTCCTATGTCAAGCCCTTTGGCATTTCTTCACGTCTTCTCCTCTCACTCGCTCTGGCAGACACCCTTTTAAGAAGGAGATGAAGTATCTTTGGGATTTTTTTTTCGAAACAAGGGTAATAACACCCGTCCCTAGGCCACACACCGAAGACATCGAAAGAGTAATGTCACAGGTGAGTCTCGAACTTGGGACCTTGAAGGGAGCATACCTTCAAAGTCCACGTTGTCAACCACTGTGCCACTTCTTGGGGACAGTATCTTTGGGAGAATTTTATCTGAGCATTTTGTTGGACTACTTGGACGAAAGAAATAAACGATTTTTTCAAGAGTGA

mRNA sequence

ATGGGGGCGTTGCAGTTGCAGTTCCAATTTCAATCTCGCTTTCAAGTCTCCAAGATTTTGTCTTCAACAATCTCGCTGATCCATCATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGCTGCAATCTCGCCGTTTTAGCTCCAATTCCATGGCCGACGATCCAGATCTCTCAAATGATCGGAATCAGCGATTTGATCAACATTCCGAAGGTACATCGTTTCAATTTGCAAATGAACGCTCAATTTCGCTGCAATTGAGTGAGTCTTTGTCTCATAAGGGTTTTAGTTTTCCTGAAAATTTTAAGCTGAATACTGATAATCATAGCAGTAGTGGTAGTAAGGAGAAGATCGAGCAGAGCTATCCTCGTCGGTTTTCGCAACCGCGGCGTCCACCAGAGGCCGATGAGTTGTTCGAGAAAATGAAGGAGACGGGTCTAATTCCCAATGCTGTTGCCATGATCAATGGGCTTTGTGAAGATCAGCTCATCCAAGAAGCAATGGAACTCCTTGGTTTGATTCGTGAGGAGGGTACAATTCCATTAGTTGTGATTTACACTGCTGTTGTTGATGGGTTCTGCCAGGCTTGGAAGCACGGACACTTCTATTTTGACAAAGCTGAGAAGCCTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAGCAATGGCATTTCTCCCAATGCTTTCAGTTTTGGGGTGTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGGGGCTGTAGCATTTGGCATTGAGATGTTGGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTTGGGTTGATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTAAGAGGGTTATAGAAACCTTTAAGCAAAAGGTATCCTTGATTGATGAGAAAGCCTTAAGATATTGTTTGAATAAAAGAGCCTCAGTTTCTCCAACTGAGATGAAGTATCTTTGGGATTTTTTTTTCGAAACAAGGGTAATAACACCCGTCCCTAGGCCACACACCGAAGACATCGAAAGAGTAATGTCACAGGTGAGTCTCGAACTTGGGACCTTGAAGGGAGCATACCTTCAAAGTCCACGTTGTCAACCACTGTGCCACTTCTTGGGGACAGTATCTTTGGGAGAATTTTATCTGAGCATTTTGTTGGACTACTTGGACGAAAGAAATAAACGATTTTTTCAAGAGTGA

Coding sequence (CDS)

ATGGGGGCGTTGCAGTTGCAGTTCCAATTTCAATCTCGCTTTCAAGTCTCCAAGATTTTGTCTTCAACAATCTCGCTGATCCATCATCCATTGCGAACGCCGGATTTCTCACTCTCGCCGCTGCAATCTCGCCGTTTTAGCTCCAATTCCATGGCCGACGATCCAGATCTCTCAAATGATCGGAATCAGCGATTTGATCAACATTCCGAAGGTACATCGTTTCAATTTGCAAATGAACGCTCAATTTCGCTGCAATTGAGTGAGTCTTTGTCTCATAAGGGTTTTAGTTTTCCTGAAAATTTTAAGCTGAATACTGATAATCATAGCAGTAGTGGTAGTAAGGAGAAGATCGAGCAGAGCTATCCTCGTCGGTTTTCGCAACCGCGGCGTCCACCAGAGGCCGATGAGTTGTTCGAGAAAATGAAGGAGACGGGTCTAATTCCCAATGCTGTTGCCATGATCAATGGGCTTTGTGAAGATCAGCTCATCCAAGAAGCAATGGAACTCCTTGGTTTGATTCGTGAGGAGGGTACAATTCCATTAGTTGTGATTTACACTGCTGTTGTTGATGGGTTCTGCCAGGCTTGGAAGCACGGACACTTCTATTTTGACAAAGCTGAGAAGCCTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAGCAATGGCATTTCTCCCAATGCTTTCAGTTTTGGGGTGTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGGGGCTGTAGCATTTGGCATTGAGATGTTGGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTTGGGTTGATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTAAGAGGGTTATAGAAACCTTTAAGCAAAAGGTATCCTTGATTGATGAGAAAGCCTTAAGATATTGTTTGAATAAAAGAGCCTCAGTTTCTCCAACTGAGATGAAGTATCTTTGGGATTTTTTTTTCGAAACAAGGGTAATAACACCCGTCCCTAGGCCACACACCGAAGACATCGAAAGAGTAATGTCACAGGTGAGTCTCGAACTTGGGACCTTGAAGGGAGCATACCTTCAAAGTCCACGTTGTCAACCACTGTGCCACTTCTTGGGGACAGTATCTTTGGGAGAATTTTATCTGAGCATTTTGTTGGACTACTTGGACGAAAGAAATAAACGATTTTTTCAAGAGTGA

Protein sequence

MGALQLQFQFQSRFQVSKILSSTISLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLSNDRNQRFDQHSEGTSFQFANERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLWDFFFETRVITPVPRPHTEDIERVMSQVSLELGTLKGAYLQSPRCQPLCHFLGTVSLGEFYLSILLDYLDERNKRFFQE
Homology
BLAST of Sed0025141 vs. NCBI nr
Match: XP_004144563.1 (pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN43381.1 hypothetical protein Csa_020248 [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 6.5e-101
Identity = 226/369 (61.25%), Postives = 252/369 (68.29%), Query Frame = 0

Query: 8   FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLS-- 67
           FQ QSR QVSKILSSTI        L+H+PLRTPDFSL P QSRRF+SNSM DD   S  
Sbjct: 4   FQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDS 63

Query: 68  ------------------------------NDRNQRFDQHSEGTSFQFANERSISLQLSE 127
                                         ++RNQRF++HSEG+S +F NE S S Q SE
Sbjct: 64  EPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQRSE 123

Query: 128 SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQS----------YPRRFSQPRRPPEADELF 187
           SLS K FSF E FKLNTDN SS   KEK E++            ++ S+P+RPPEADE+F
Sbjct: 124 SLSQKDFSFLEKFKLNTDNQSS--GKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIF 183

Query: 188 EKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKH 247
            KMKETGLIPNAVAM++GLC+D LIQEAM+L GLIRE+GTIP VVIYTAVVDGFC     
Sbjct: 184 GKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC----- 243

Query: 248 GHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESG 307
                 KAEK DEAIRIFRKMQ NGI PNAFSFGVLIQGLYKCKKL+ AVAF  EMLESG
Sbjct: 244 ------KAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESG 303

Query: 308 HSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKY 328
           H PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     
Sbjct: 304 HLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPD---- 355

BLAST of Sed0025141 vs. NCBI nr
Match: XP_023554525.1 (pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554526.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 4.6e-99
Identity = 224/375 (59.73%), Postives = 259/375 (69.07%), Query Frame = 0

Query: 1   MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMAD 60
           MGALQ+  Q QSR +VSKILSSTI        L+H PLRTPD SLSP++SR FSSNSM D
Sbjct: 1   MGALQM--QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDD 60

Query: 61  D------------------------------------PDLSNDRNQRFDQHSEGTSFQFA 120
           D                                    P   ++RNQRF++HSEG+S +FA
Sbjct: 61  DWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEGSAPYPEDNRNQRFNRHSEGSSSRFA 120

Query: 121 NERSISLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPR 180
           NE  +S + +ESLS K FSF E FKLNTDN S+  S EKIE S   +F        SQP+
Sbjct: 121 NEGPMSRRRNESLSQKDFSFLEKFKLNTDNQST--STEKIEPSSSAQFSESMQGEQSQPQ 180

Query: 181 RPPEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVV 240
            PPEADE+F KMKETGLIPNAVAM++GLC+D LIQEAM+L GLIRE+GTIP VV+YTAVV
Sbjct: 181 CPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVV 240

Query: 241 DGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVA 300
           DGFC           KAEK DEAIRIFRKMQ+NGISPNAFS+G+LIQGLYK K+LE AV+
Sbjct: 241 DGFC-----------KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVS 300

Query: 301 FGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRA 325
           F IEMLESGHSPNLTTFVGLIDELCKE+G +EA  VIET KQK  LI+EKALR  LNKRA
Sbjct: 301 FCIEMLESGHSPNLTTFVGLIDELCKEKGEDEAHTVIETLKQKGFLINEKALREFLNKRA 356

BLAST of Sed0025141 vs. NCBI nr
Match: XP_008462006.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >XP_008462007.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >KAA0050550.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18790.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 372.5 bits (955), Expect = 4.6e-99
Identity = 223/364 (61.26%), Postives = 249/364 (68.41%), Query Frame = 0

Query: 8   FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------ 67
           FQFQSR QVSKILSS+I        L+H+PLRTPDFSLSP  SRRFSSNSM DD      
Sbjct: 4   FQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSES 63

Query: 68  --------------------------PDLSNDRNQRFDQHSEGTSFQFANERSISLQLSE 127
                                      D  ++RNQRF++HSEG+S +F NE S S Q SE
Sbjct: 64  EPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQRSE 123

Query: 128 SLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEK 187
           SLS K FSF E FKLNTDN SS   K E+   S P       ++ SQ +RPP ADE+F K
Sbjct: 124 SLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEIFRK 183

Query: 188 MKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGH 247
           MKE+GLIPNAVAM++GLC+D LIQEAM+L  LIRE+GTIP VVIYTAVVDGFC       
Sbjct: 184 MKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFC------- 243

Query: 248 FYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS 307
               KAEK DEAIRIFRKMQ+ GISPNAFSFGVLIQGLYKCKKL+ AVAF  EMLESGH 
Sbjct: 244 ----KAEKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHL 303

Query: 308 PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLW 325
           PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     +W
Sbjct: 304 PNLTTFVGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPD----IW 352

BLAST of Sed0025141 vs. NCBI nr
Match: XP_022136091.1 (pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_022136092.1 pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia])

HSP 1 Score: 370.9 bits (951), Expect = 1.3e-98
Identity = 223/370 (60.27%), Postives = 250/370 (67.57%), Query Frame = 0

Query: 6   LQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLS 65
           LQ Q QSR ++SKI+SS+I        L+H  LRT DFSL P QSR FSSNSM DD  +S
Sbjct: 4   LQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAIS 63

Query: 66  N------------------------------------DRNQRFDQHSEGTSFQFANERSI 125
           N                                    DRN+R ++ SEG+SF+F NE  I
Sbjct: 64  NSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGI 123

Query: 126 SLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPRRPPEA 185
           S Q SE LS K FSF E FKLNTDN SS  SKEK EQS   RF        SQP+RPPEA
Sbjct: 124 SRQRSEFLSQKDFSFLEKFKLNTDNQSS--SKEKTEQSSAPRFSESVQEKQSQPQRPPEA 183

Query: 186 DELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQ 245
           DE+F+KMKETGLIPNAVAM++GLC+D LIQEAM+L GLIRE+GTIP VVIYTAVVDGFC 
Sbjct: 184 DEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC- 243

Query: 246 AWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEM 305
                     KAEK DEAIRIFRKMQ NGISPNAFSFGVLIQGLYKC KLE A+ F IEM
Sbjct: 244 ----------KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEM 303

Query: 306 LESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPT 325
           LESGHSPN+TT VGL+DELCKERG EEA+ VIET KQK  L++EKALR  LNKRA  SP 
Sbjct: 304 LESGHSPNVTTLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPN 356

BLAST of Sed0025141 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 370.2 bits (949), Expect = 2.3e-98
Identity = 221/373 (59.25%), Postives = 255/373 (68.36%), Query Frame = 0

Query: 1   MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMAD 60
           MGALQ+  Q QSR +VSKIL STI        L+H PLRTPD SLSP++SR FSSNSM D
Sbjct: 1   MGALQM--QLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDD 60

Query: 61  D------------------------------------PDLSNDRNQRFDQHSEGTSFQFA 120
           D                                    P   ++RNQRF++H EG+  +FA
Sbjct: 61  DWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFA 120

Query: 121 NERSISLQLSESLSHKGFSFPENFKLNTDNHSSS------GSKEKIEQSYPRRFSQPRRP 180
           NE  +S + SESLS K FSF E FKLNTDN S+S       S  +  +S   + SQP+ P
Sbjct: 121 NEGPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCP 180

Query: 181 PEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDG 240
           PEADE+F KMKETGLIPNAVAM++GLC+D LIQEAM+L GLIRE+GTIP VV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFG 300
           FC           KAE  DEAIRIFRKMQ+NGISPNAFS+GVLIQGLYKCKKLE AV+F 
Sbjct: 241 FC-----------KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFC 300

Query: 301 IEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASV 325
           IEMLESGHSPNLTTFVGLIDELCKE+GV+EA  VIET KQK  LI+EKALR  LNKRA  
Sbjct: 301 IEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPF 356

BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.9e-55
Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 0

Query: 89  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLI 148
           +LS  GF   E FKL  +  S    K    + YP+   +P  PPE +DE+F+KMKE GLI
Sbjct: 80  TLSDDGFL--EQFKLGVNQDSRETPK---PEQYPQ---EPLPPPEDSDEIFKKMKEGGLI 139

Query: 149 PNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAE 208
           PNAVAM++GLC+D L+QEAM+L GL+R++GTIP VVIYTAVV+ FC           KA 
Sbjct: 140 PNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC-----------KAH 199

Query: 209 KPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFV 268
           K ++A RIFRKMQ+NGI+PNAFS+GVL+QGLY C  L+ AVAF  EMLESGHSPN+ TFV
Sbjct: 200 KIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFV 259

Query: 269 GLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRA 310
            L+D LC+ +GVE+A+  I+T  QK   ++ KA++  ++KRA
Sbjct: 260 ELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRA 282

BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q9CAN5 (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-16
Identity = 56/202 (27.72%), Postives = 100/202 (49.50%), Query Frame = 0

Query: 125 FSQPRRPPEADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPL 184
           F++  +  EA++LF++M +  + PN V   ++ING C    + EA ++  L+  +  +P 
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379

Query: 185 VVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKC 244
           VV Y  +++GFC           KA+K  + + +FR M   G+  N  ++  LI G ++ 
Sbjct: 380 VVTYNTLINGFC-----------KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 439

Query: 245 KKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKAL 304
              + A     +M+  G  PN+ T+  L+D LCK   +E+A  V E + QK S ++    
Sbjct: 440 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE-YLQK-SKMEPDIY 499

Query: 305 RYCLNKRASVSPTEMKYLWDFF 324
            Y +         +++  WD F
Sbjct: 500 TYNIMSEGMCKAGKVEDGWDLF 508

BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-16
Identity = 48/170 (28.24%), Postives = 95/170 (55.88%), Query Frame = 0

Query: 133 EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVV 192
           E+++LFE M   G+ PN +    +ING C    + EAM+LL  +   G  P  V Y+ ++
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 193 DGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVA 252
           +G+C           K  + ++A+ +F++M+S+G+SP+  ++ +++QGL++ ++   A  
Sbjct: 554 NGYC-----------KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 613

Query: 253 FGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEK 300
             + + ESG    L+T+  ++  LCK +  ++A ++     Q + L+D K
Sbjct: 614 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF----QNLCLMDLK 648

BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-16
Identity = 52/174 (29.89%), Postives = 92/174 (52.87%), Query Frame = 0

Query: 134 ADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVD 193
           AD+  ++M+E G++PN V    +IN  C+   + EA      + ++G +     YT +++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600

Query: 194 GFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAF 253
           G             K +K D+A  IFR+M+  GI+P+ FS+GVLI G  K   ++ A + 
Sbjct: 601 GLF-----------KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 660

Query: 254 GIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYC 305
             EM+E G +PN+  +  L+   C+   +E+AK +++  +  V  +   A+ YC
Sbjct: 661 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD--EMSVKGLHPNAVTYC 701

BLAST of Sed0025141 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-16
Identity = 52/194 (26.80%), Postives = 96/194 (49.48%), Query Frame = 0

Query: 133 EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVV 192
           EA++L+++M +  + P+ V   ++ING C    + EA ++   +  +   P VV Y  ++
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403

Query: 193 DGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVA 252
            GFC           K ++ +E + +FR+M   G+  N  ++ +LIQGL++    + A  
Sbjct: 404 KGFC-----------KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 463

Query: 253 FGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRA 312
              EM+  G  PN+ T+  L+D LCK   +E+A  V E  ++  S ++     Y +    
Sbjct: 464 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR--SKMEPTIYTYNIMIEG 523

Query: 313 SVSPTEMKYLWDFF 324
                +++  WD F
Sbjct: 524 MCKAGKVEDGWDLF 524

BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A0A0K6C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 3.1e-101
Identity = 226/369 (61.25%), Postives = 252/369 (68.29%), Query Frame = 0

Query: 8   FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLS-- 67
           FQ QSR QVSKILSSTI        L+H+PLRTPDFSL P QSRRF+SNSM DD   S  
Sbjct: 4   FQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAFSDS 63

Query: 68  ------------------------------NDRNQRFDQHSEGTSFQFANERSISLQLSE 127
                                         ++RNQRF++HSEG+S +F NE S S Q SE
Sbjct: 64  EPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQRSE 123

Query: 128 SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQS----------YPRRFSQPRRPPEADELF 187
           SLS K FSF E FKLNTDN SS   KEK E++            ++ S+P+RPPEADE+F
Sbjct: 124 SLSQKDFSFLEKFKLNTDNQSS--GKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEIF 183

Query: 188 EKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKH 247
            KMKETGLIPNAVAM++GLC+D LIQEAM+L GLIRE+GTIP VVIYTAVVDGFC     
Sbjct: 184 GKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC----- 243

Query: 248 GHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESG 307
                 KAEK DEAIRIFRKMQ NGI PNAFSFGVLIQGLYKCKKL+ AVAF  EMLESG
Sbjct: 244 ------KAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESG 303

Query: 308 HSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKY 328
           H PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     
Sbjct: 304 HLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPD---- 355

BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 223/364 (61.26%), Postives = 249/364 (68.41%), Query Frame = 0

Query: 8   FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------ 67
           FQFQSR QVSKILSS+I        L+H+PLRTPDFSLSP  SRRFSSNSM DD      
Sbjct: 4   FQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSES 63

Query: 68  --------------------------PDLSNDRNQRFDQHSEGTSFQFANERSISLQLSE 127
                                      D  ++RNQRF++HSEG+S +F NE S S Q SE
Sbjct: 64  EPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQRSE 123

Query: 128 SLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEK 187
           SLS K FSF E FKLNTDN SS   K E+   S P       ++ SQ +RPP ADE+F K
Sbjct: 124 SLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEIFRK 183

Query: 188 MKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGH 247
           MKE+GLIPNAVAM++GLC+D LIQEAM+L  LIRE+GTIP VVIYTAVVDGFC       
Sbjct: 184 MKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFC------- 243

Query: 248 FYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS 307
               KAEK DEAIRIFRKMQ+ GISPNAFSFGVLIQGLYKCKKL+ AVAF  EMLESGH 
Sbjct: 244 ----KAEKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHL 303

Query: 308 PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLW 325
           PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     +W
Sbjct: 304 PNLTTFVGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPD----IW 352

BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-99
Identity = 223/364 (61.26%), Postives = 249/364 (68.41%), Query Frame = 0

Query: 8   FQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADD------ 67
           FQFQSR QVSKILSS+I        L+H+PLRTPDFSLSP  SRRFSSNSM DD      
Sbjct: 4   FQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSES 63

Query: 68  --------------------------PDLSNDRNQRFDQHSEGTSFQFANERSISLQLSE 127
                                      D  ++RNQRF++HSEG+S +F NE S S Q SE
Sbjct: 64  EPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQRSE 123

Query: 128 SLSHKGFSFPENFKLNTDNHSSSGSK-EKIEQSYP-------RRFSQPRRPPEADELFEK 187
           SLS K FSF E FKLNTDN SS   K E+   S P       ++ SQ +RPP ADE+F K
Sbjct: 124 SLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEIFRK 183

Query: 188 MKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGH 247
           MKE+GLIPNAVAM++GLC+D LIQEAM+L  LIRE+GTIP VVIYTAVVDGFC       
Sbjct: 184 MKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFC------- 243

Query: 248 FYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHS 307
               KAEK DEAIRIFRKMQ+ GISPNAFSFGVLIQGLYKCKKL+ AVAF  EMLESGH 
Sbjct: 244 ----KAEKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHL 303

Query: 308 PNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPTEMKYLW 325
           PNLTTFVGLID LC E+GV+EA  V+ETFKQK  LIDEKALR  LNKRA  SP     +W
Sbjct: 304 PNLTTFVGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPD----IW 352

BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A6J1C2J3 (pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=3673 GN=LOC111007869 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 6.5e-99
Identity = 223/370 (60.27%), Postives = 250/370 (67.57%), Query Frame = 0

Query: 6   LQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMADDPDLS 65
           LQ Q QSR ++SKI+SS+I        L+H  LRT DFSL P QSR FSSNSM DD  +S
Sbjct: 4   LQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAIS 63

Query: 66  N------------------------------------DRNQRFDQHSEGTSFQFANERSI 125
           N                                    DRN+R ++ SEG+SF+F NE  I
Sbjct: 64  NSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNEGGI 123

Query: 126 SLQLSESLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRF--------SQPRRPPEA 185
           S Q SE LS K FSF E FKLNTDN SS  SKEK EQS   RF        SQP+RPPEA
Sbjct: 124 SRQRSEFLSQKDFSFLEKFKLNTDNQSS--SKEKTEQSSAPRFSESVQEKQSQPQRPPEA 183

Query: 186 DELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQ 245
           DE+F+KMKETGLIPNAVAM++GLC+D LIQEAM+L GLIRE+GTIP VVIYTAVVDGFC 
Sbjct: 184 DEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC- 243

Query: 246 AWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEM 305
                     KAEK DEAIRIFRKMQ NGISPNAFSFGVLIQGLYKC KLE A+ F IEM
Sbjct: 244 ----------KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEM 303

Query: 306 LESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASVSPT 325
           LESGHSPN+TT VGL+DELCKERG EEA+ VIET KQK  L++EKALR  LNKRA  SP 
Sbjct: 304 LESGHSPNVTTLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPN 356

BLAST of Sed0025141 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98
Identity = 221/373 (59.25%), Postives = 255/373 (68.36%), Query Frame = 0

Query: 1   MGALQLQFQFQSRFQVSKILSSTI-------SLIHHPLRTPDFSLSPLQSRRFSSNSMAD 60
           MGALQ+  Q QSR +VSKIL STI        L+H PLRTPD SLSP++SR FSSNSM D
Sbjct: 1   MGALQM--QLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDD 60

Query: 61  D------------------------------------PDLSNDRNQRFDQHSEGTSFQFA 120
           D                                    P   ++RNQRF++H EG+  +FA
Sbjct: 61  DWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFA 120

Query: 121 NERSISLQLSESLSHKGFSFPENFKLNTDNHSSS------GSKEKIEQSYPRRFSQPRRP 180
           NE  +S + SESLS K FSF E FKLNTDN S+S       S  +  +S   + SQP+ P
Sbjct: 121 NEGPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCP 180

Query: 181 PEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDG 240
           PEADE+F KMKETGLIPNAVAM++GLC+D LIQEAM+L GLIRE+GTIP VV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFG 300
           FC           KAE  DEAIRIFRKMQ+NGISPNAFS+GVLIQGLYKCKKLE AV+F 
Sbjct: 241 FC-----------KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFC 300

Query: 301 IEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRASV 325
           IEMLESGHSPNLTTFVGLIDELCKE+GV+EA  VIET KQK  LI+EKALR  LNKRA  
Sbjct: 301 IEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPF 356

BLAST of Sed0025141 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-56
Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 0

Query: 89  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLI 148
           +LS  GF   E FKL  +  S    K    + YP+   +P  PPE +DE+F+KMKE GLI
Sbjct: 80  TLSDDGFL--EQFKLGVNQDSRETPK---PEQYPQ---EPLPPPEDSDEIFKKMKEGGLI 139

Query: 149 PNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAE 208
           PNAVAM++GLC+D L+QEAM+L GL+R++GTIP VVIYTAVV+ FC           KA 
Sbjct: 140 PNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC-----------KAH 199

Query: 209 KPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFV 268
           K ++A RIFRKMQ+NGI+PNAFS+GVL+QGLY C  L+ AVAF  EMLESGHSPN+ TFV
Sbjct: 200 KIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFV 259

Query: 269 GLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRA 310
            L+D LC+ +GVE+A+  I+T  QK   ++ KA++  ++KRA
Sbjct: 260 ELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRA 282

BLAST of Sed0025141 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-56
Identity = 121/222 (54.50%), Postives = 158/222 (71.17%), Query Frame = 0

Query: 89  SLSHKGFSFPENFKLNTDNHSSSGSKEKIEQSYPRRFSQPRRPPE-ADELFEKMKETGLI 148
           +LS  GF   E FKL  +  S    K    + YP+   +P  PPE +DE+F+KMKE GLI
Sbjct: 80  TLSDDGFL--EQFKLGVNQDSRETPK---PEQYPQ---EPLPPPEDSDEIFKKMKEGGLI 139

Query: 149 PNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVVDGFCQAWKHGHFYFDKAE 208
           PNAVAM++GLC+D L+QEAM+L GL+R++GTIP VVIYTAVV+ FC           KA 
Sbjct: 140 PNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC-----------KAH 199

Query: 209 KPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVAFGIEMLESGHSPNLTTFV 268
           K ++A RIFRKMQ+NGI+PNAFS+GVL+QGLY C  L+ AVAF  EMLESGHSPN+ TFV
Sbjct: 200 KIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFV 259

Query: 269 GLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRA 310
            L+D LC+ +GVE+A+  I+T  QK   ++ KA++  ++KRA
Sbjct: 260 ELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRA 282

BLAST of Sed0025141 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-23
Identity = 63/197 (31.98%), Postives = 106/197 (53.81%), Query Frame = 0

Query: 127 QPRRPPEADELFEKMKETGLIPNAVAMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYT 186
           +P  P    E+F KM+  G    AV M + L +D    EA+EL   I+++  +P VV +T
Sbjct: 177 EPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHT 236

Query: 187 AVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKL-E 246
           A+V+ +             A +  E +++F +M ++G+SPNA+++ VLI+GL    K  +
Sbjct: 237 AIVEAYA-----------NAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHK 296

Query: 247 GAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCL 306
            A  + +EM+ +G SPN  T+  + +   +E   E A+ +++  K K  + DEKA+R  L
Sbjct: 297 DAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREAL 356

Query: 307 N-KRASVSPTEMKYLWD 322
             KR  V  T +  L+D
Sbjct: 357 EYKRGQVFRTVINLLFD 362

BLAST of Sed0025141 vs. TAIR 10
Match: AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-17
Identity = 56/202 (27.72%), Postives = 100/202 (49.50%), Query Frame = 0

Query: 125 FSQPRRPPEADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPL 184
           F++  +  EA++LF++M +  + PN V   ++ING C    + EA ++  L+  +  +P 
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379

Query: 185 VVIYTAVVDGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKC 244
           VV Y  +++GFC           KA+K  + + +FR M   G+  N  ++  LI G ++ 
Sbjct: 380 VVTYNTLINGFC-----------KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 439

Query: 245 KKLEGAVAFGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKAL 304
              + A     +M+  G  PN+ T+  L+D LCK   +E+A  V E + QK S ++    
Sbjct: 440 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE-YLQK-SKMEPDIY 499

Query: 305 RYCLNKRASVSPTEMKYLWDFF 324
            Y +         +++  WD F
Sbjct: 500 TYNIMSEGMCKAGKVEDGWDLF 508

BLAST of Sed0025141 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-17
Identity = 52/194 (26.80%), Postives = 96/194 (49.48%), Query Frame = 0

Query: 133 EADELFEKMKETGLIPNAV---AMINGLCEDQLIQEAMELLGLIREEGTIPLVVIYTAVV 192
           EA++L+++M +  + P+ V   ++ING C    + EA ++   +  +   P VV Y  ++
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403

Query: 193 DGFCQAWKHGHFYFDKAEKPDEAIRIFRKMQSNGISPNAFSFGVLIQGLYKCKKLEGAVA 252
            GFC           K ++ +E + +FR+M   G+  N  ++ +LIQGL++    + A  
Sbjct: 404 KGFC-----------KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 463

Query: 253 FGIEMLESGHSPNLTTFVGLIDELCKERGVEEAKRVIETFKQKVSLIDEKALRYCLNKRA 312
              EM+  G  PN+ T+  L+D LCK   +E+A  V E  ++  S ++     Y +    
Sbjct: 464 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR--SKMEPTIYTYNIMIEG 523

Query: 313 SVSPTEMKYLWDFF 324
                +++  WD F
Sbjct: 524 MCKAGKVEDGWDLF 524

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004144563.16.5e-10161.25pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN4338... [more]
XP_023554525.14.6e-9959.73pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita... [more]
XP_008462006.14.6e-9961.26PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] ... [more]
XP_022136091.11.3e-9860.27pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_... [more]
XP_022969144.12.3e-9859.25pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X... [more]
Match NameE-valueIdentityDescription
Q9SZL51.9e-5554.50Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX... [more]
Q9CAN51.8e-1627.72Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop... [more]
Q76C992.3e-1628.24Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... [more]
Q9FIT73.0e-1629.89Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop... [more]
Q9SXD13.0e-1626.80Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0K6C03.1e-10161.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1[more]
A0A1S3CFW02.2e-9961.26pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3D5J52.2e-9961.26Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1C2J36.5e-9960.27pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=... [more]
A0A6J1I1Q21.1e-9859.25pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
AT4G38150.11.4e-5654.50Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G38150.21.4e-5654.50Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G03560.23.4e-2331.98Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G63080.11.2e-1727.72Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62670.12.1e-1726.80rna processing factor 2 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 123..201
e-value: 9.6E-12
score: 46.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 202..318
e-value: 4.5E-19
score: 71.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 152..177
e-value: 0.034
score: 14.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 205..228
e-value: 1.4E-4
score: 19.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 182..240
e-value: 6.5E-12
score: 45.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 227..261
score: 9.328124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..56
NoneNo IPR availablePANTHERPTHR45613:SF39PPR CONTAINING PLANT-LIKE PROTEINcoord: 77..314
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 77..314

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025141.1Sed0025141.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding