Sed0025092 (gene) Chayote v1

Overview


Name	Sed0025092
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Carbohydrate-responsive element-binding protein
Location	LG06: 43176255 .. 43177766 (-)
RNA-Seq Expression	Sed0025092
Synteny	Sed0025092

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTCAAATTTCCAAGAAGCGGAACCGGGACGACTCGGCAGAGTTTTCCGAGTTGGCCGAGTCGGAAACAGGTTCGCCGGAGGTGAAGCGGCTCAGAGACGATCTTCTCGGGTTTCTCGACGAGTTCGACCCGGAACCGGCGACTCAGGATCTGGACTCGCTGATGAAGAGTTTCGAGGAAGAAATCGCCACCGCGTCGTCGTCGCCGGCGCCGGCGGTGGAGTTGGGGGCGGAATCCGGCGAGTCTCAGCCGGAGTTAGGTTATTTGTTGGAAGCCTCCGACGACGAGCTCGGCCTTCCGCCGTCTGTGACGTCGGCGGAGTCGCTGCCGGAGATCGGAGAGATGTGGAGGTTGGAGGATCAGATTCCGAATTACGATGCTTTCGAACTGGAAGGCGGAGATGTGTACGGCGGCGGCGATGCGGCGGCGTATGTGGCTCTTGACGGACTTTTTGAGTATTCGAATTTGTATTTGGATGCGTAGGAGTGGTCGGAGTTTCGCCGGCGAAGTAGGTAGAATTGCCGCCGATCTGTAAATGTTTTTTTTCTTTTCGTTGATGGAAAAGATTGTAGGAATAGACTGATACAAATGGCCACAGATGAAATCTGAAATTGGTTCGTTTTTTGAAAAAAAAATTTCTTTGAATACACAGGATTAGACCAATTAATTTTCACATGGTTTTATACAGTGGAATTATGTGGATTTCGTTTCTGTTCTGGATTGCTAATTTTCAAGTCTTGAAATGGTGTTTGGTTGGTGATGTACTCAGACGCCGATAATTTCTTTAAAAATATATATACCATATAATATACCATATCTTTTATCTAATTTTATCAAATATTAAATCTTAAAAAAAAAATTATCAATTATCATATTAAACTCTATGTAATTTTTAACTATATAATATAAAATAAAATATAATTATCAATCAATAAATTTATAATCATTGTATTATAAAAAATTAATATAAAATAAATAATTTTATAATATTAATCTTCAAATAATTACTTCAAATTTTCAAATCACTCTATTTCTTTTTTTTTCGACTTTATAAAAGGTTAGACACCATTTTTATTATTAATTTTTTTTATAAGACAAAAATATTGTTTTAATCTCTAGATTGAACTCATCTCAATATCTTTTTTAACCAATTAAACTATTCATGGTGGTTGTTTTTAATTTCAAAACATAATTACGGTAATATAACTAAACCATAGATATAAAGATTAGAAATATATATTTTCTAAAAAGAAATTAATTCAACCACTAGCTTATTAAATGGCAACATGAGCTATAGATAAAGTAGGGATGTATATGGTTTGGATTGATTTTTTTTTTGTTATCAATTTAAATTTTTTGGTTTATCAATCCTTTACCGTGTTTAACTTTATGCATTAGAGTAATTCAATTTAATCCAGTACTATATTTTTTGTTTGAATTGAGTTTTCGAGATTGATATACTCCTCTTTCTTCTATATATATATATATATATATATATATATATAA

mRNA sequence

ATGGAGATTCAAATTTCCAAGAAGCGGAACCGGGACGACTCGGCAGAGTTTTCCGAGTTGGCCGAGTCGGAAACAGGTTCGCCGGAGGTGAAGCGGCTCAGAGACGATCTTCTCGGGTTTCTCGACGAGTTCGACCCGGAACCGGCGACTCAGGATCTGGACTCGCTGATGAAGAGTTTCGAGGAAGAAATCGCCACCGCGTCGTCGTCGCCGGCGCCGGCGGTGGAGTTGGGGGCGGAATCCGGCGAGTCTCAGCCGGAGTTAGGTTATTTGTTGGAAGCCTCCGACGACGAGCTCGGCCTTCCGCCGTCTGTGACGTCGGCGGAGTCGCTGCCGGAGATCGGAGAGATGTGGAGGTTGGAGGATCAGATTCCGAATTACGATGCTTTCGAACTGGAAGGCGGAGATGTGTACGGCGGCGGCGATGCGGCGGCGTATGTGGCTCTTGACGGACTTTTTGAATTGATATACTCCTCTTTCTTCTATATATATATATATATATATATATATATATAA

Coding sequence (CDS)

ATGGAGATTCAAATTTCCAAGAAGCGGAACCGGGACGACTCGGCAGAGTTTTCCGAGTTGGCCGAGTCGGAAACAGGTTCGCCGGAGGTGAAGCGGCTCAGAGACGATCTTCTCGGGTTTCTCGACGAGTTCGACCCGGAACCGGCGACTCAGGATCTGGACTCGCTGATGAAGAGTTTCGAGGAAGAAATCGCCACCGCGTCGTCGTCGCCGGCGCCGGCGGTGGAGTTGGGGGCGGAATCCGGCGAGTCTCAGCCGGAGTTAGGTTATTTGTTGGAAGCCTCCGACGACGAGCTCGGCCTTCCGCCGTCTGTGACGTCGGCGGAGTCGCTGCCGGAGATCGGAGAGATGTGGAGGTTGGAGGATCAGATTCCGAATTACGATGCTTTCGAACTGGAAGGCGGAGATGTGTACGGCGGCGGCGATGCGGCGGCGTATGTGGCTCTTGACGGACTTTTTGAATTGATATACTCCTCTTTCTTCTATATATATATATATATATATATATATATATAA

Protein sequence

MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSFEEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVTSAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFELIYSSFFYIYIYIYIYI

Homology

[Close]

BLAST of Sed0025092 vs. NCBI nr
Match: XP_023542043.1 (uncharacterized protein LOC111802016 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234.2 bits (596), Expect = 8.5e-58
Identity = 129/170 (75.88%), Postives = 137/170 (80.59%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME QISKKR+RDDSAEF+   ESE GSPEVKRLRDDLLGF DE DPEPATQDLDSLM+SF
Sbjct: 1   MENQISKKRDRDDSAEFT---ESENGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVT-------------- 120
           EEEIATASSSP P V+L  +SGESQPELGYLLEASDDELGLPPSVT              
Sbjct: 61  EEEIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFA 120

Query: 121 --SAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
             S++SL E+GEMWR EDQIPNYDAFELEGGDVY G D AAYVA DGLFE
Sbjct: 121 RVSSDSL-EVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAAYVAFDGLFE 166

[Close]

BLAST of Sed0025092 vs. NCBI nr
Match: XP_022967994.1 (uncharacterized protein LOC111467364 [Cucurbita maxima])

HSP 1 Score: 233.0 bits (593), Expect = 1.9e-57
Identity = 129/170 (75.88%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME QISKKR+RDDSAEF+   ESE GSPEVKRLRDDLLGF DE DPEPATQ+LDSLM+SF
Sbjct: 1   MENQISKKRDRDDSAEFT---ESENGSPEVKRLRDDLLGFFDESDPEPATQELDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVT-------------- 120
           EEEIATASSSPAP V+L  ESGESQPELGYLLEASDDELGLPPSVT              
Sbjct: 61  EEEIATASSSPAPVVDLTVESGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFA 120

Query: 121 --SAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
             S +SL E+GEMWR EDQIPNYDAFELEGGDVY G D A YVA DGLFE
Sbjct: 121 RVSTDSL-EVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFE 166

[Close]

BLAST of Sed0025092 vs. NCBI nr
Match: KAG7013029.1 (hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232.3 bits (591), Expect = 3.2e-57
Identity = 128/170 (75.29%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME QISKKR+RDDSAEF+   ESE GSPEVKRLRDDLLGF DE DPEPATQDLDSLM+SF
Sbjct: 1   MENQISKKRDRDDSAEFT---ESENGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVT-------------- 120
           EEEIATASSSP P V+L  +SGESQPELGYLLEASDDELGLPPSVT              
Sbjct: 61  EEEIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFA 120

Query: 121 --SAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
             S++SL E+GEMWR EDQIPNYDAFELEGGDVY G D A YVA DGLFE
Sbjct: 121 RVSSDSL-EVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFE 166

[Close]

BLAST of Sed0025092 vs. NCBI nr
Match: KAG6573972.1 (hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.9 bits (590), Expect = 4.2e-57
Identity = 128/170 (75.29%), Postives = 135/170 (79.41%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME QISKKR+RDDSAEF+   ESE GSPEVKRLRDDLLGF DE DPEPATQDLDSLM+SF
Sbjct: 1   MENQISKKRDRDDSAEFT---ESENGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVT-------------- 120
           EEEIATASSSP P V+L  +SGESQPELGYLLEASDDELGLPPSVT              
Sbjct: 61  EEEIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFA 120

Query: 121 --SAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
             S +SL E+GEMWR EDQIPNYDAFELEGGDVY G D A YVA DGLFE
Sbjct: 121 RVSCDSL-EVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFE 166

[Close]

BLAST of Sed0025092 vs. NCBI nr
Match: XP_022945766.1 (uncharacterized protein LOC111449910 [Cucurbita moschata])

HSP 1 Score: 229.2 bits (583), Expect = 2.7e-56
Identity = 127/170 (74.71%), Postives = 135/170 (79.41%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME QISKKR+RDDSAEF+   ESE GS EVKRLRDDLLGF DE DPEPATQDLDSLM+SF
Sbjct: 1   MENQISKKRDRDDSAEFT---ESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVT-------------- 120
           EEEIATASSSP P V+L  +SGESQPELGYLLEASDDELGLPPSVT              
Sbjct: 61  EEEIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFA 120

Query: 121 --SAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
             S++SL E+GEMWR EDQIPNYDAFELEGGDVY G D A YVA DGLFE
Sbjct: 121 RVSSDSL-EVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFE 166

[Close]

BLAST of Sed0025092 vs. ExPASy TrEMBL
Match: A0A6J1HYB6 (uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 9.1e-58
Identity = 129/170 (75.88%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME QISKKR+RDDSAEF+   ESE GSPEVKRLRDDLLGF DE DPEPATQ+LDSLM+SF
Sbjct: 1   MENQISKKRDRDDSAEFT---ESENGSPEVKRLRDDLLGFFDESDPEPATQELDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVT-------------- 120
           EEEIATASSSPAP V+L  ESGESQPELGYLLEASDDELGLPPSVT              
Sbjct: 61  EEEIATASSSPAPVVDLTVESGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFA 120

Query: 121 --SAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
             S +SL E+GEMWR EDQIPNYDAFELEGGDVY G D A YVA DGLFE
Sbjct: 121 RVSTDSL-EVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFE 166

[Close]

BLAST of Sed0025092 vs. ExPASy TrEMBL
Match: A0A6J1G1T4 (uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC111449910 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.3e-56
Identity = 127/170 (74.71%), Postives = 135/170 (79.41%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME QISKKR+RDDSAEF+   ESE GS EVKRLRDDLLGF DE DPEPATQDLDSLM+SF
Sbjct: 1   MENQISKKRDRDDSAEFT---ESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVT-------------- 120
           EEEIATASSSP P V+L  +SGESQPELGYLLEASDDELGLPPSVT              
Sbjct: 61  EEEIATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSISKEEFDESAVFA 120

Query: 121 --SAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
             S++SL E+GEMWR EDQIPNYDAFELEGGDVY G D A YVA DGLFE
Sbjct: 121 RVSSDSL-EVGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLFE 166

[Close]

BLAST of Sed0025092 vs. ExPASy TrEMBL
Match: A0A5A7SV83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00920 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 7.2e-55
Identity = 122/160 (76.25%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME Q SKKR+RDDS      AESETGSPEVKRLRDDLLGF DE DPEPATQDLDSLM+SF
Sbjct: 1   MENQNSKKRDRDDS------AESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVTSAE------SLPEI 120
           EEEIATASSSP P V+L A+SGESQPELGYLLEASDDELGLPPS +  E         +I
Sbjct: 61  EEEIATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSNSQEEFARISTDSSDI 120

Query: 121 GEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
           GEMWR EDQIPNYDAFELEGGDVY G D A YVA DGL E
Sbjct: 121 GEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLE 154

[Close]

BLAST of Sed0025092 vs. ExPASy TrEMBL
Match: A0A1S3BEX2 (uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 7.2e-55
Identity = 122/160 (76.25%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME Q SKKR+RDDS      AESETGSPEVKRLRDDLLGF DE DPEPATQDLDSLM+SF
Sbjct: 1   MENQNSKKRDRDDS------AESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVTSAE------SLPEI 120
           EEEIATASSSP P V+L A+SGESQPELGYLLEASDDELGLPPS +  E         +I
Sbjct: 61  EEEIATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSNSQEEFARISTDSSDI 120

Query: 121 GEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
           GEMWR EDQIPNYDAFELEGGDVY G D A YVA DGL E
Sbjct: 121 GEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLE 154

[Close]

BLAST of Sed0025092 vs. ExPASy TrEMBL
Match: A0A0A0KR57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608610 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.8e-52
Identity = 116/160 (72.50%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSF 60
           ME Q SKKR+RDDS      AESETGSPEVKRLRDDLLGF D+ DPEP TQDLDSLM+SF
Sbjct: 1   MENQNSKKRDRDDS------AESETGSPEVKRLRDDLLGFFDDSDPEPPTQDLDSLMRSF 60

Query: 61  EEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVTSAE------SLPEI 120
           EEEIATASSSP P V+L A+S +SQPELGYLLEASDDELGLPPS +  +         +I
Sbjct: 61  EEEIATASSSPVPVVDLTADSADSQPELGYLLEASDDELGLPPSNSQQDFARISTDSSDI 120

Query: 121 GEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
           GEMWR  DQIPNYDAFELEGGDVY G D A YVA DGL E
Sbjct: 121 GEMWRFVDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLE 154

[Close]

BLAST of Sed0025092 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 77/169 (45.56%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 7   KKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSFEEEIAT 66
           KKR RD+S +     E+   SPEVKRLRDDL   LD+ DPEP +QDLDS+MKSFE+E++T
Sbjct: 16  KKRVRDESFD-----EAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELST 75

Query: 67  ASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPS---------------------V 126
            +++ A      + +GE+QP+LGYLLEASDDELGLPP                      V
Sbjct: 76  VTTTTAQG---SSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLV 135

Query: 127 TSAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
            ++     I E+W  ED + NY   +  G  V  GGD   YVA++GLFE
Sbjct: 136 RASSDSSGIDEIWGFEDHVSNYGGLDF-GSGVGDGGD---YVAVEGLFE 172

[Close]

BLAST of Sed0025092 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 78/179 (43.58%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 7   KKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSFEEEIAT 66
           KKR RD+S +     E+   SPEVKRLRDDL   LD+ DPEP +QDLDS+MKSFE+E++T
Sbjct: 16  KKRVRDESFD-----EAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELST 75

Query: 67  ASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPS---------------------V 126
            +++ A      + +GE+QP+LGYLLEASDDELGLPP                      V
Sbjct: 76  VTTTTAQG---SSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLV 135

Query: 127 TSAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFELIYSSFFYIY 165
            ++     I E+W  ED + NY   +  G  V  GGD   YVA++G F   Y +F + Y
Sbjct: 136 RASSDSSGIDEIWGFEDHVSNYGGLDF-GSGVGDGGD---YVAVEGFF---YYTFSFTY 179

[Close]

BLAST of Sed0025092 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-25
Identity = 78/179 (43.58%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 7   KKRNRDDSAEFSELAESETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKSFEEEIAT 66
           KKR RD+S +     E+   SPEVKRLRDDL   LD+ DPEP +QDLDS+MKSFE+E++T
Sbjct: 16  KKRVRDESFD-----EAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELST 75

Query: 67  ASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPS---------------------V 126
            +++ A      + +GE+QP+LGYLLEASDDELGLPP                      V
Sbjct: 76  VTTTTAQG---SSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLV 135

Query: 127 TSAESLPEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFELIYSSFFYIY 165
            ++     I E+W  ED + NY   +  G  V  GGD   YVA++GL      SFF+ +
Sbjct: 136 RASSDSSGIDEIWGFEDHVSNYGGLDF-GSGVGDGGD---YVAVEGL------SFFHSF 176

[Close]

BLAST of Sed0025092 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-17
Identity = 64/174 (36.78%), Postives = 90/174 (51.72%), Query Frame = 0


Query: 1   MEIQISKKRNRDDSAEFSELAES-ETGSPEVKRLRDDLLGFLDEFDPEPATQDLDSLMKS 60
           ME  + ++  R DS     + +  +  SP+VKRLRDDL    D+   +P +QDLDS+MKS
Sbjct: 1   MEDLLEERLTRTDSVGNKRVRDGLDLDSPDVKRLRDDL---FDDSGLDPVSQDLDSVMKS 60

Query: 61  FEEEIATASSSPAPAVELGAESGESQPELGYLLEASDDELGLPPSVTSAESL-------- 120
           FE E++T +++          SGE+QP+LGYL EASDDELGLPP +T  ++L        
Sbjct: 61  FENELSTTTAA--------LSSGETQPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEET 120

Query: 121 -----------PEIGEMWRLEDQIPNYDAFELEGGDVYGGGDAAAYVALDGLFE 155
                       E+GE+   ED +  +   +L        GD       DGLFE
Sbjct: 121 VTELVRASSDSSEVGELCGFEDHVTEFGPCDL--------GD-------DGLFE 148

The following BLAST results are available for this feature:

BLAST of Sed0025092 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542043.1	8.5e-58	75.88	uncharacterized protein LOC111802016 [Cucurbita pepo subsp. pepo]	[more]
XP_022967994.1	1.9e-57	75.88	uncharacterized protein LOC111467364 [Cucurbita maxima]	[more]
KAG7013029.1	3.2e-57	75.29	hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6573972.1	4.2e-57	75.29	hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945766.1	2.7e-56	74.71	uncharacterized protein LOC111449910 [Cucurbita moschata]	[more]

BLAST of Sed0025092 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0025092 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYB6	9.1e-58	75.88	uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364...	[more]
A0A6J1G1T4	1.3e-56	74.71	uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]
A0A5A7SV83	7.2e-55	76.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BEX2	7.2e-55	76.25	uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=...	[more]
A0A0A0KR57	9.8e-52	72.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608610 PE=4 SV=1	[more]

BLAST of Sed0025092 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	2.2e-27	45.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	1.2e-25	43.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	2.0e-25	43.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	2.0e-17	36.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 5..154
None	No IPR available	PANTHER	PTHR34539:SF19	T6J4.11 PROTEIN	coord: 5..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025092.1	Sed0025092.1	mRNA