Sed0025047 (gene) Chayote v1

Overview


Name	Sed0025047
Type	gene
Organism	Sechium edule (Chayote v1)
Description	VQ motif-containing protein
Location	LG01: 15851640 .. 15852639 (+)
RNA-Seq Expression	Sed0025047
Synteny	Sed0025047

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAATTCAAAACTTACACAGTAAAACATTTCTCACCAAATCTCTCCTTCTCAACACCTTCCTTCCTTCTTTCCTTCCCCCTTTTTCTCTCTCTGCTCTGCAACTTCTTCATTAATGGAAACCTAATTTCGCCACCAAAACCCCACCACCATGGCCGCCAGCTCCGGCAATGGAGTCCGATCCGAATCTCTCAACCCTTACCCCACCACCTTCGTCCAAGCCGATTCCTCCTCTTTCAAGCAAGTCGTTCAAATCCTCACCGGTTCCCCTCAAACCGCCAAGCAAGCCTCCGATTCCCATTCCAAAACCCACATTCCGCCCGTTAAATCCTTGCAACCCAGAACCCACCAATCTGGGTTTAAGCTCTACGAGCGTAGGAACTCTTTGAATAAACTTAATATCAATCCCTTGATTCCCGGTTCTAATTCTTCTGGGTTTTCTCCGAGGAAGCCTGAGATTCTGTCTCCGAGTATTCTGGAATTTCCGGCTCTTTCTCTCAGTCCGGTTACGCCGCTTATTCCTGACCCGTTTGATCGATCTGGGTTGGGGAATTGTAGCCATTTGAGAAATGGGAATGCTGATTTGGAAGCTGAGGTTGAAGATAAAGCGATTAAGGAAAAGGGGTTTTACTTGCATCCATCCCCGACCACTACTCCTCGAGACTCCGAGCCGAGGTTGTTGCCATTGTTTCCATTGACGTCGCCTAGAGCTCCAGGTTCATCTTCCACTTCTTGAATTACCCTTTTCTTTTTTTTCATTTATGGATTTTGGGTTTTTCTTGTTCTTTCAATTTCGAATTTATATGTTGCTGCTGGGTGATGACATTTGATGATAATGAAAAAGGAGGTGACAGTGTTAAGGGTTTTAGTTGTAACGATGTATTTTTATTGTTGGTTCAATTGTATAATTTGATGTTCTGTATCGTTTCTTCTCATGAAAAGAGTACAAAATTAGCCCTCATTTTCCCCTTTGTTTTGCCCTTTCATAACTTGAAGAAGG

mRNA sequence

TAAAAATTCAAAACTTACACAGTAAAACATTTCTCACCAAATCTCTCCTTCTCAACACCTTCCTTCCTTCTTTCCTTCCCCCTTTTTCTCTCTCTGCTCTGCAACTTCTTCATTAATGGAAACCTAATTTCGCCACCAAAACCCCACCACCATGGCCGCCAGCTCCGGCAATGGAGTCCGATCCGAATCTCTCAACCCTTACCCCACCACCTTCGTCCAAGCCGATTCCTCCTCTTTCAAGCAAGTCGTTCAAATCCTCACCGGTTCCCCTCAAACCGCCAAGCAAGCCTCCGATTCCCATTCCAAAACCCACATTCCGCCCGTTAAATCCTTGCAACCCAGAACCCACCAATCTGGGTTTAAGCTCTACGAGCGTAGGAACTCTTTGAATAAACTTAATATCAATCCCTTGATTCCCGGTTCTAATTCTTCTGGGTTTTCTCCGAGGAAGCCTGAGATTCTGTCTCCGAGTATTCTGGAATTTCCGGCTCTTTCTCTCAGTCCGGTTACGCCGCTTATTCCTGACCCGTTTGATCGATCTGGGTTGGGGAATTGTAGCCATTTGAGAAATGGGAATGCTGATTTGGAAGCTGAGGTTGAAGATAAAGCGATTAAGGAAAAGGGGTTTTACTTGCATCCATCCCCGACCACTACTCCTCGAGACTCCGAGCCGAGGTTGTTGCCATTGTTTCCATTGACGTCGCCTAGAGCTCCAGGTTCATCTTCCACTTCTTGAATTACCCTTTTCTTTTTTTTCATTTATGGATTTTGGGTTTTTCTTGTTCTTTCAATTTCGAATTTATATGTTGCTGCTGGGTGATGACATTTGATGATAATGAAAAAGGAGGTGACAGTGTTAAGGGTTTTAGTTGTAACGATGTATTTTTATTGTTGGTTCAATTGTATAATTTGATGTTCTGTATCGTTTCTTCTCATGAAAAGAGTACAAAATTAGCCCTCATTTTCCCCTTTGTTTTGCCCTTTCATAACTTGAAGAAGG

Coding sequence (CDS)

ATGGCCGCCAGCTCCGGCAATGGAGTCCGATCCGAATCTCTCAACCCTTACCCCACCACCTTCGTCCAAGCCGATTCCTCCTCTTTCAAGCAAGTCGTTCAAATCCTCACCGGTTCCCCTCAAACCGCCAAGCAAGCCTCCGATTCCCATTCCAAAACCCACATTCCGCCCGTTAAATCCTTGCAACCCAGAACCCACCAATCTGGGTTTAAGCTCTACGAGCGTAGGAACTCTTTGAATAAACTTAATATCAATCCCTTGATTCCCGGTTCTAATTCTTCTGGGTTTTCTCCGAGGAAGCCTGAGATTCTGTCTCCGAGTATTCTGGAATTTCCGGCTCTTTCTCTCAGTCCGGTTACGCCGCTTATTCCTGACCCGTTTGATCGATCTGGGTTGGGGAATTGTAGCCATTTGAGAAATGGGAATGCTGATTTGGAAGCTGAGGTTGAAGATAAAGCGATTAAGGAAAAGGGGTTTTACTTGCATCCATCCCCGACCACTACTCCTCGAGACTCCGAGCCGAGGTTGTTGCCATTGTTTCCATTGACGTCGCCTAGAGCTCCAGGTTCATCTTCCACTTCTTGA

Protein sequence

MAASSGNGVRSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQASDSHSKTHIPPVKSLQPRTHQSGFKLYERRNSLNKLNINPLIPGSNSSGFSPRKPEILSPSILEFPALSLSPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRLLPLFPLTSPRAPGSSSTS

Homology

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BLAST of Sed0025047 vs. NCBI nr
Match: KAA0056997.1 (VQ motif-containing protein 4 isoform X2 [Cucumis melo var. makuwa] >TYK26424.1 VQ motif-containing protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-78
Identity = 160/198 (80.81%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA----------SDSHSKTHIPPVK 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA          SDSHSKTHIPP+K
Sbjct: 54  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASVKSAPGVPNSDSHSKTHIPPIK 113

Query: 70  SLQPRTHQSGFKLYERRNSLNKLNINPLIP--GSNS-SGFSPRKPEILSPSILEFPALSL 129
           SL PR  QSGFKLYERRNSLNKL INP+ P  GS + SGFSPRK EILSPSIL+FPAL+L
Sbjct: 114 SL-PRRQQSGFKLYERRNSLNKLKINPVFPVFGSGAHSGFSPRKHEILSPSILDFPALAL 173

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGN  L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 174 SPVTPLIPDPFDRSGLANCSYLKNGNGKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 233

Query: 190 LPLFPLTSPRAPGSSSTS 195
           LPLFPLTSPR PGSSSTS
Sbjct: 234 LPLFPLTSPRVPGSSSTS 250

[Close]

BLAST of Sed0025047 vs. NCBI nr
Match: XP_031736090.1 (VQ motif-containing protein 4 [Cucumis sativus] >KAE8652719.1 hypothetical protein Csa_014219 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 4.9e-78
Identity = 158/198 (79.80%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA----------SDSHSKTHIPPVK 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA          SDSHSKTHIPP+K
Sbjct: 54  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASVKSAPGVPNSDSHSKTHIPPIK 113

Query: 70  SLQPRTHQSGFKLYERRNSLNKLNINPLIP---GSNSSGFSPRKPEILSPSILEFPALSL 129
           SL PR  QSGFKLYERRNSLNKL INP+ P       SGFSPRK EILSPSIL+FPAL+L
Sbjct: 114 SL-PRRQQSGFKLYERRNSLNKLKINPVFPVFASGAHSGFSPRKHEILSPSILDFPALAL 173

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGN  L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 174 SPVTPLIPDPFDRSGLANCSYLKNGNGKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 233

Query: 190 LPLFPLTSPRAPGSSSTS 195
           LPLFPLTSPR PGSSSTS
Sbjct: 234 LPLFPLTSPRVPGSSSTS 250

[Close]

BLAST of Sed0025047 vs. NCBI nr
Match: XP_023520333.1 (VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 157/198 (79.29%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA----------SDSHSKTHIPPVK 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA          SDS SKTHIPPVK
Sbjct: 58  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASVNPAAAPSNSDSVSKTHIPPVK 117

Query: 70  SLQPRTHQSGFKLYERRNSLNKLNINPLIP---GSNSSGFSPRKPEILSPSILEFPALSL 129
           SL P+  QSGFKLYERRNSLNKL INP+ P    +  SGFSPRKPEILSPSIL+FPAL+L
Sbjct: 118 SL-PKRQQSGFKLYERRNSLNKLKINPVFPVFGSTTHSGFSPRKPEILSPSILDFPALAL 177

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGNA L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 178 SPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 237

Query: 190 LPLFPLTSPRAPGSSSTS 195
           LPLFP+TSPR PGSSS S
Sbjct: 238 LPLFPMTSPRVPGSSSIS 254

[Close]

BLAST of Sed0025047 vs. NCBI nr
Match: XP_022140262.1 (VQ motif-containing protein 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 156/195 (80.00%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA-----------SDSHSKTHIPPV 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA           S+S SK+HIPP+
Sbjct: 65  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASAKPAATASQNSESVSKSHIPPI 124

Query: 70  KSLQPRTHQSGFKLYERRNSLNKLNINPLIP--GSNSSGFSPRKPEILSPSILEFPALSL 129
           KSL PR  QSGFKLYERRNSLNKL INPLIP  GS +SGFSPRKPEILSPSIL+FPAL+L
Sbjct: 125 KSL-PRRQQSGFKLYERRNSLNKLRINPLIPVFGSCNSGFSPRKPEILSPSILDFPALAL 184

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGNA L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 185 SPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 244

Query: 190 LPLFPLTSPRAPGSS 192
           LPLFP+TSPR PGS+
Sbjct: 245 LPLFPMTSPRVPGST 258

[Close]

BLAST of Sed0025047 vs. NCBI nr
Match: KAG6583990.1 (VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019612.1 VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-77
Identity = 156/198 (78.79%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA----------SDSHSKTHIPPVK 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA          SDS SKTHIPP+K
Sbjct: 58  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASVNPAAAPSNSDSVSKTHIPPIK 117

Query: 70  SLQPRTHQSGFKLYERRNSLNKLNINPLIP---GSNSSGFSPRKPEILSPSILEFPALSL 129
           SL P+  QSGFKLYERRNSLNKL INP+ P    +  SGFSPRKPEILSPSIL+FPAL+L
Sbjct: 118 SL-PKRQQSGFKLYERRNSLNKLKINPVFPVFGSTTHSGFSPRKPEILSPSILDFPALAL 177

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGNA L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 178 SPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 237

Query: 190 LPLFPLTSPRAPGSSSTS 195
           LPLFP+TSPR PGSSS S
Sbjct: 238 LPLFPMTSPRVPGSSSIS 254

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BLAST of Sed0025047 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-54
Identity = 123/205 (60.00%), Postives = 141/205 (68.78%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQAS--------------DSHSKTHI 69
           RSES NPYPTTFVQAD+SSFKQVVQ+LTGS +  K  S               + S   I
Sbjct: 48  RSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSI 107

Query: 70  PPVKSL----QPRTHQSGFKLYERRNSLNKLNINPLIPGSN--SSGFSPRKPEILSPSIL 129
           PP+K++    Q  +  SGF+LYERRNS+  L INPL P  N  +S FSPRKPEILSPSIL
Sbjct: 108 PPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSIL 167

Query: 130 EFPALSLSPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTP 189
           +FP+L LSPVTPLIPDPFDRSG  N        +  E   E+KA+KE+GFYLHPSP TTP
Sbjct: 168 DFPSLVLSPVTPLIPDPFDRSGSSN-------QSPNELAAEEKAMKERGFYLHPSPATTP 227

Query: 190 RDSEPRLLPLFPLTSPRAPGSSSTS 195
            D EPRLLPLFP+TSPR  GSSS S
Sbjct: 228 MDPEPRLLPLFPVTSPRVSGSSSAS 245

[Close]

BLAST of Sed0025047 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.5e-34
Identity = 98/195 (50.26%), Postives = 118/195 (60.51%), Query Frame = 0


Query: 17  YPTTFVQADSSSFKQVVQILTG-----SPQTAKQASDSHSKTH--IPPVKSLQPRTHQSG 76
           YPTTFVQADSSSFKQVVQ+LTG     SP + +  +    K +  IPP+K+ QP+ H SG
Sbjct: 35  YPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQPKKH-SG 94

Query: 77  FKLYERR-------NSLNKLNINPLIPGSNSSG---FSPRKPEILSPSILEFPALSL-SP 136
            KLYERR       N  N L IN L+ G   +G   FSPR  EILSPS L+FP L+L SP
Sbjct: 95  NKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNSP 154

Query: 137 VTPLIP-------DPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRD 187
           VTPL         DPFD+                    E++ I +KG+YLH SP +TPRD
Sbjct: 155 VTPLKQGTNGNEGDPFDKMS--------------PLSEEERGIADKGYYLHRSPISTPRD 214

[Close]

BLAST of Sed0025047 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-33
Identity = 86/178 (48.31%), Postives = 112/178 (62.92%), Query Frame = 0


Query: 17  YPTTFVQADSSSFKQVVQILTGSPQTAKQASDSHSKT--HIPPVKSLQPRTHQSGFKLYE 76
           Y TTF++ D SSFKQVVQ+LTG P+      D        IPP+K++  +   S F+L E
Sbjct: 34  YETTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSE 93

Query: 77  RRNSL-NKLNINPLIPGSNSSGFSPRKPEILSPSILEFPALSLSPVTPLIPDPFDRSGLG 136
           RRNS+ + LNINP   G          PEIL+P+IL FPAL LSP TPL+ DPF R   G
Sbjct: 94  RRNSMKHYLNINPTHSG---------PPEILTPTILNFPALDLSPDTPLMSDPFYRP--G 153

Query: 137 NCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRLLPLFPLTSPRAPGSS 192
           + S   + +     + ++++IKEKGFYL PSP+TTPRD+EPRLL LFP+T   +P  S
Sbjct: 154 SFSQSPSDSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPS 200

[Close]

BLAST of Sed0025047 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-29
Identity = 100/210 (47.62%), Postives = 118/210 (56.19%), Query Frame = 0


Query: 15  NPYPTTFVQADSSSFKQVVQILTGS---PQTAK--------QASDSHSKTHIPPVKSLQP 74
           NPYPTTFVQAD+S+FKQVVQ+LTGS     T K          ++  S   IPP+K    
Sbjct: 45  NPYPTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKK--- 104

Query: 75  RTHQSGFKLYERRN------SLNKLNINPL---------IPGSNSS-----GFSPRKPE- 134
               + FKLYERR       + N L IN L           G NSS      FSPR    
Sbjct: 105 ---TNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSS 164

Query: 135 ----ILSPSILEFPALSL-SPVTPL--IPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIK 186
               +LSPS+L+FP L L SPVTPL    DPF++S     S L  GN    +  EDKAI 
Sbjct: 165 SENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKS-----SPLSLGN----SSEEDKAIA 224

[Close]

BLAST of Sed0025047 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 64/179 (35.75%), Postives = 85/179 (47.49%), Query Frame = 0


Query: 19  TTFVQADSSSFKQVVQILTGSPQTAKQASDSHSKTHIPPVKSLQPRTHQSGFKLYERRNS 78
           TTFVQ D+++F+++VQ LTG P     A+ +   T I      +P +     KL+ERR  
Sbjct: 17  TTFVQTDTNTFREIVQRLTG-PTENNAAAATPEATVIKTAIQKRPTS-----KLHERRQC 76

Query: 79  LNKLNINPLIPGSNSSGFSPRKPEILSPSILEFPA----LSLSPVTPLIPDPFDR-SGLG 138
           +                    K EI+ P +   P      S S  T L+  P    S L 
Sbjct: 77  MRP------------------KLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLF 136

Query: 139 NCSHLRNGNAD---LEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRLLPLFPLTSPRAPG 190
           +   L  G  D      E E+KAIKE+ FYLHPSP + P  +EP LL LFPLTSP + G
Sbjct: 137 SNLSLIEGEPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSPNSSG 171

[Close]

BLAST of Sed0025047 vs. ExPASy TrEMBL
Match: A0A5A7UQT0 (VQ motif-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00880 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 160/198 (80.81%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA----------SDSHSKTHIPPVK 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA          SDSHSKTHIPP+K
Sbjct: 54  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASVKSAPGVPNSDSHSKTHIPPIK 113

Query: 70  SLQPRTHQSGFKLYERRNSLNKLNINPLIP--GSNS-SGFSPRKPEILSPSILEFPALSL 129
           SL PR  QSGFKLYERRNSLNKL INP+ P  GS + SGFSPRK EILSPSIL+FPAL+L
Sbjct: 114 SL-PRRQQSGFKLYERRNSLNKLKINPVFPVFGSGAHSGFSPRKHEILSPSILDFPALAL 173

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGN  L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 174 SPVTPLIPDPFDRSGLANCSYLKNGNGKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 233

Query: 190 LPLFPLTSPRAPGSSSTS 195
           LPLFPLTSPR PGSSSTS
Sbjct: 234 LPLFPLTSPRVPGSSSTS 250

[Close]

BLAST of Sed0025047 vs. ExPASy TrEMBL
Match: A0A6J1CGC6 (VQ motif-containing protein 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010970 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 9.0e-78
Identity = 156/195 (80.00%), Postives = 172/195 (88.21%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA-----------SDSHSKTHIPPV 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA           S+S SK+HIPP+
Sbjct: 65  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASAKPAATASQNSESVSKSHIPPI 124

Query: 70  KSLQPRTHQSGFKLYERRNSLNKLNINPLIP--GSNSSGFSPRKPEILSPSILEFPALSL 129
           KSL PR  QSGFKLYERRNSLNKL INPLIP  GS +SGFSPRKPEILSPSIL+FPAL+L
Sbjct: 125 KSL-PRRQQSGFKLYERRNSLNKLRINPLIPVFGSCNSGFSPRKPEILSPSILDFPALAL 184

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGNA L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 185 SPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 244

Query: 190 LPLFPLTSPRAPGSS 192
           LPLFP+TSPR PGS+
Sbjct: 245 LPLFPMTSPRVPGST 258

[Close]

BLAST of Sed0025047 vs. ExPASy TrEMBL
Match: A0A6J1KRE6 (VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495788 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 155/198 (78.28%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA----------SDSHSKTHIPPVK 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA          SDS SKTHIPP+K
Sbjct: 61  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASVNPAAAPSNSDSVSKTHIPPIK 120

Query: 70  SLQPRTHQSGFKLYERRNSLNKLNINPLIP---GSNSSGFSPRKPEILSPSILEFPALSL 129
           SL P+  QSGFKLYERRNS+NKL INP+ P    +  SGFSPRKPEILSPSIL+FPAL+L
Sbjct: 121 SL-PKRQQSGFKLYERRNSMNKLKINPVFPVFGSTTHSGFSPRKPEILSPSILDFPALAL 180

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGNA L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 181 SPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 240

Query: 190 LPLFPLTSPRAPGSSSTS 195
           LPLFP+TSPR PGSSS S
Sbjct: 241 LPLFPMTSPRVPGSSSIS 257

[Close]

BLAST of Sed0025047 vs. ExPASy TrEMBL
Match: A0A6J1CHL5 (VQ motif-containing protein 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010970 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.6e-77
Identity = 155/195 (79.49%), Postives = 171/195 (87.69%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA-----------SDSHSKTHIPPV 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA           S+S SK+HIPP+
Sbjct: 65  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASAKPAATASQNSESVSKSHIPPI 124

Query: 70  KSLQPRTHQSGFKLYERRNSLNKLNINPLIP--GSNSSGFSPRKPEILSPSILEFPALSL 129
           KSL PR  QSGFKLYERRNSLNKL INPLIP  GS +SGFSPRKPEILSPSIL+FPAL+L
Sbjct: 125 KSL-PRRQQSGFKLYERRNSLNKLRINPLIPVFGSCNSGFSPRKPEILSPSILDFPALAL 184

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGNA L+AE E+KAIKEKGFYLHPSPTTTPRDSEPRL
Sbjct: 185 SPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAIKEKGFYLHPSPTTTPRDSEPRL 244

Query: 190 LPLFPLTSPRAPGSS 192
           LPLFP+TSPR P +S
Sbjct: 245 LPLFPMTSPRVPENS 258

[Close]

BLAST of Sed0025047 vs. ExPASy TrEMBL
Match: A0A6J1EII3 (VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111434386 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.0e-76
Identity = 154/198 (77.78%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQA----------SDSHSKTHIPPVK 69
           RSES+NPYPTTFVQAD+SSFKQVVQ+LTGSP+TAKQA          SDS SKTHIPP+K
Sbjct: 58  RSESVNPYPTTFVQADTSSFKQVVQMLTGSPETAKQASVNPAAAPSNSDSVSKTHIPPIK 117

Query: 70  SLQPRTHQSGFKLYERRNSLNKLNINPLIP---GSNSSGFSPRKPEILSPSILEFPALSL 129
           SL P+  QSGFKLYERRNS+NKL INP+ P    +  SGFSPRKPEILSPSIL+FPAL+L
Sbjct: 118 SL-PKRQQSGFKLYERRNSMNKLKINPVFPVFGSTTHSGFSPRKPEILSPSILDFPALAL 177

Query: 130 SPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRL 189
           SPVTPLIPDPFDRSGL NCS+L+NGNA L+AE E+KAIKEKGFYLHPSPTTTPRD EPRL
Sbjct: 178 SPVTPLIPDPFDRSGLANCSYLKNGNAKLDAEAEEKAIKEKGFYLHPSPTTTPRDYEPRL 237

Query: 190 LPLFPLTSPRAPGSSSTS 195
           LPLFP+TSPR PGSSS S
Sbjct: 238 LPLFPMTSPRVPGSSSIS 254

[Close]

BLAST of Sed0025047 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55
Identity = 123/205 (60.00%), Postives = 141/205 (68.78%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQAS--------------DSHSKTHI 69
           RSES NPYPTTFVQAD+SSFKQVVQ+LTGS +  K  S               + S   I
Sbjct: 48  RSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSI 107

Query: 70  PPVKSL----QPRTHQSGFKLYERRNSLNKLNINPLIPGSN--SSGFSPRKPEILSPSIL 129
           PP+K++    Q  +  SGF+LYERRNS+  L INPL P  N  +S FSPRKPEILSPSIL
Sbjct: 108 PPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSIL 167

Query: 130 EFPALSLSPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTP 189
           +FP+L LSPVTPLIPDPFDRSG  N        +  E   E+KA+KE+GFYLHPSP TTP
Sbjct: 168 DFPSLVLSPVTPLIPDPFDRSGSSN-------QSPNELAAEEKAMKERGFYLHPSPATTP 227

Query: 190 RDSEPRLLPLFPLTSPRAPGSSSTS 195
            D EPRLLPLFP+TSPR  GSSS S
Sbjct: 228 MDPEPRLLPLFPVTSPRVSGSSSAS 245

[Close]

BLAST of Sed0025047 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 206.5 bits (524), Expect = 2.0e-53
Identity = 118/197 (59.90%), Postives = 136/197 (69.04%), Query Frame = 0


Query: 10  RSESLNPYPTTFVQADSSSFKQVVQILTGSPQTAKQAS--------------DSHSKTHI 69
           RSES NPYPTTFVQAD+SSFKQVVQ+LTGS +  K  S               + S   I
Sbjct: 48  RSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSI 107

Query: 70  PPVKSL----QPRTHQSGFKLYERRNSLNKLNINPLIPGSN--SSGFSPRKPEILSPSIL 129
           PP+K++    Q  +  SGF+LYERRNS+  L INPL P  N  +S FSPRKPEILSPSIL
Sbjct: 108 PPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSIL 167

Query: 130 EFPALSLSPVTPLIPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTP 187
           +FP+L LSPVTPLIPDPFDRSG  N        +  E   E+KA+KE+GFYLHPSP TTP
Sbjct: 168 DFPSLVLSPVTPLIPDPFDRSGSSN-------QSPNELAAEEKAMKERGFYLHPSPATTP 227

[Close]

BLAST of Sed0025047 vs. TAIR 10
Match: AT3G15300.1 (VQ motif-containing protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-35
Identity = 98/195 (50.26%), Postives = 118/195 (60.51%), Query Frame = 0


Query: 17  YPTTFVQADSSSFKQVVQILTG-----SPQTAKQASDSHSKTH--IPPVKSLQPRTHQSG 76
           YPTTFVQADSSSFKQVVQ+LTG     SP + +  +    K +  IPP+K+ QP+ H SG
Sbjct: 35  YPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQPKKH-SG 94

Query: 77  FKLYERR-------NSLNKLNINPLIPGSNSSG---FSPRKPEILSPSILEFPALSL-SP 136
            KLYERR       N  N L IN L+ G   +G   FSPR  EILSPS L+FP L+L SP
Sbjct: 95  NKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNSP 154

Query: 137 VTPLIP-------DPFDRSGLGNCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRD 187
           VTPL         DPFD+                    E++ I +KG+YLH SP +TPRD
Sbjct: 155 VTPLKQGTNGNEGDPFDKMS--------------PLSEEERGIADKGYYLHRSPISTPRD 214

[Close]

BLAST of Sed0025047 vs. TAIR 10
Match: AT2G33780.1 (VQ motif-containing protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-34
Identity = 86/178 (48.31%), Postives = 112/178 (62.92%), Query Frame = 0


Query: 17  YPTTFVQADSSSFKQVVQILTGSPQTAKQASDSHSKT--HIPPVKSLQPRTHQSGFKLYE 76
           Y TTF++ D SSFKQVVQ+LTG P+      D        IPP+K++  +   S F+L E
Sbjct: 34  YETTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSE 93

Query: 77  RRNSL-NKLNINPLIPGSNSSGFSPRKPEILSPSILEFPALSLSPVTPLIPDPFDRSGLG 136
           RRNS+ + LNINP   G          PEIL+P+IL FPAL LSP TPL+ DPF R   G
Sbjct: 94  RRNSMKHYLNINPTHSG---------PPEILTPTILNFPALDLSPDTPLMSDPFYRP--G 153

Query: 137 NCSHLRNGNADLEAEVEDKAIKEKGFYLHPSPTTTPRDSEPRLLPLFPLTSPRAPGSS 192
           + S   + +     + ++++IKEKGFYL PSP+TTPRD+EPRLL LFP+T   +P  S
Sbjct: 154 SFSQSPSDSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPS 200

[Close]

BLAST of Sed0025047 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30
Identity = 100/210 (47.62%), Postives = 118/210 (56.19%), Query Frame = 0


Query: 15  NPYPTTFVQADSSSFKQVVQILTGS---PQTAK--------QASDSHSKTHIPPVKSLQP 74
           NPYPTTFVQAD+S+FKQVVQ+LTGS     T K          ++  S   IPP+K    
Sbjct: 45  NPYPTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKK--- 104

Query: 75  RTHQSGFKLYERRN------SLNKLNINPL---------IPGSNSS-----GFSPRKPE- 134
               + FKLYERR       + N L IN L           G NSS      FSPR    
Sbjct: 105 ---TNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSS 164

Query: 135 ----ILSPSILEFPALSL-SPVTPL--IPDPFDRSGLGNCSHLRNGNADLEAEVEDKAIK 186
               +LSPS+L+FP L L SPVTPL    DPF++S     S L  GN    +  EDKAI 
Sbjct: 165 SENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKS-----SPLSLGN----SSEEDKAIA 224

The following BLAST results are available for this feature:

BLAST of Sed0025047 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056997.1	2.2e-78	80.81	VQ motif-containing protein 4 isoform X2 [Cucumis melo var. makuwa] >TYK26424.1 ...	[more]
XP_031736090.1	4.9e-78	79.80	VQ motif-containing protein 4 [Cucumis sativus] >KAE8652719.1 hypothetical prote...	[more]
XP_023520333.1	1.9e-77	79.29	VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022140262.1	1.9e-77	80.00	VQ motif-containing protein 4-like isoform X1 [Momordica charantia]	[more]
KAG6583990.1	2.4e-77	78.79	VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]

BLAST of Sed0025047 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5M750	2.3e-54	60.00	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9LDZ1	3.5e-34	50.26	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]
O23660	2.9e-33	48.31	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]
Q9FHZ3	2.0e-29	47.62	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
Q9FNP0	2.4e-11	35.75	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]

BLAST of Sed0025047 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQT0	1.1e-78	80.81	VQ motif-containing protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1CGC6	9.0e-78	80.00	VQ motif-containing protein 4-like isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1KRE6	2.0e-77	78.28	VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495788 P...	[more]
A0A6J1CHL5	7.6e-77	79.49	VQ motif-containing protein 4-like isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1EII3	1.0e-76	77.78	VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111434386...	[more]

BLAST of Sed0025047 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28280.1	1.6e-55	60.00	VQ motif-containing protein	[more]
AT1G28280.2	2.0e-53	59.90	VQ motif-containing protein	[more]
AT3G15300.1	2.5e-35	50.26	VQ motif-containing protein	[more]
AT2G33780.1	2.1e-34	48.31	VQ motif-containing protein	[more]
AT5G53830.1	1.4e-30	47.62	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 16..42 e-value: 5.5E-10 score: 38.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..194
IPR039827	VQ motif-containing protein 4/13	PANTHER	PTHR33402:SF16	VQ MOTIF-CONTAINING PROTEIN 13-RELATED	coord: 9..191
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 9..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025047.1	Sed0025047.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus