Homology
BLAST of Sed0025020 vs. NCBI nr
Match:
XP_038881915.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida] >XP_038881917.1 pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])
HSP 1 Score: 1453.0 bits (3760), Expect = 0.0e+00
Identity = 724/849 (85.28%), Postives = 777/849 (91.52%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPITCSELR 60
MLFIFNYYYR GRKQIRFHELN+L+K QK SANS F++NG +YKC HF LH + CSE
Sbjct: 1 MLFIFNYYYRIGRKQIRFHELNYLNKFQKGSANSAFVLNGVIYKCLGHFCLHLLACSEHC 60
Query: 61 AFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQKT-----GDSSFFGNSDEECE 120
AFFS S RD F R LRTYC+ +G N+ FD A++EFQKT GDSSFFGN +EE E
Sbjct: 61 AFFSSSSRRDSSFGRSLRTYCTDTYGRNNRFDAANDEFQKTDLEDSGDSSFFGNPNEEHE 120
Query: 121 RDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFR 180
+DR KFGDD+V EES++EEEE GD+ D DLLG+ S RNHG+GNDFK+VEIGED+FR
Sbjct: 121 KDRHLKFGDDIVAEESNDEEEEDGDL-GDAADLLGFNLSIRNHGQGNDFKRVEIGEDIFR 180
Query: 181 YPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRL 240
YPLVR+ CKLI+LSSSW+RKFE ELR+LVRSL+P Q+CAVLLSQ+DER+AL+FFYWADRL
Sbjct: 181 YPLVRDTCKLIKLSSSWSRKFEGELRYLVRSLNPQQVCAVLLSQEDERIALQFFYWADRL 240
Query: 241 WRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRD 300
WRYRHDSSVYLVML+ILSKTKLCQGAKRVLRLM+RRGIQLWPEAFGFVMVSYSRAGRLRD
Sbjct: 241 WRYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRD 300
Query: 301 AMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIK 360
AMKVLTLMQ AGVEPNLSICNTAIHILVVGNEL+KALKFAERMVLIGI+PNVVTYNCLIK
Sbjct: 301 AMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALKFAERMVLIGIAPNVVTYNCLIK 360
Query: 361 GYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLL 420
GYCN HQV QAMELIDQM SKGC PDKVSYYT MGFLCRDKR+NEIRELMKKM+M+SNLL
Sbjct: 361 GYCNVHQVGQAMELIDQMPSKGCFPDKVSYYTVMGFLCRDKRVNEIRELMKKMQMDSNLL 420
Query: 421 PDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKEL 480
PDHVTYNSLIQMLSK+GHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEG +KKAKEL
Sbjct: 421 PDHVTYNSLIQMLSKYGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGKIKKAKEL 480
Query: 481 VGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCR 540
VGEMFSKGC PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH CKPNAVTYT LLNGLCR
Sbjct: 481 VGEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCR 540
Query: 541 NGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVE 600
NGKSLEAR MMNMSEEEWWTPNAITYSVVVHGLRRE KLNEACDVVREMIGKGFFPNPVE
Sbjct: 541 NGKSLEARNMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 600
Query: 601 INLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMY 660
INLL+QSLCR+GKP+EA QLLKECMNKGCAVN VN+TTVIHGFCQKDDLEAALSL DDMY
Sbjct: 601 INLLIQSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLFDDMY 660
Query: 661 LCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
LCNKHPDSVTYTT+IDALGKTGR+EEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE
Sbjct: 661 LCNKHPDSVTYTTVIDALGKTGRMEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
Query: 721 DLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMES 780
DLL +LKKM KSRFQTAYN VIEKLCKFG+LEEA+SL+GEVLRTASRTDAKTCHVLMES
Sbjct: 721 DLLKILKKMLLKSRFQTAYNLVIEKLCKFGYLEEASSLLGEVLRTASRTDAKTCHVLMES 780
Query: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVNS 840
YL GIPMSAYKVACRMFNRNL+PDLKLCEKVSK+L+ EGKLEEADRL+ RFVERGCV S
Sbjct: 781 YLRVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLMIEGKLEEADRLVFRFVERGCV-S 840
Query: 841 VQNNKHLQD 845
Q KHLQD
Sbjct: 841 AQEQKHLQD 847
BLAST of Sed0025020 vs. NCBI nr
Match:
KAG6581451.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1440.2 bits (3727), Expect = 0.0e+00
Identity = 716/849 (84.33%), Postives = 775/849 (91.28%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPITCSELR 60
MLFIFNYYYR GR+QIR HELN+L+K QK AN F+VN VYKCFD F+ PI CSE+
Sbjct: 1 MLFIFNYYYRIGRRQIRVHELNYLNKFQKGGANFAFVVNEVVYKCFDRFTSQPIACSEVG 60
Query: 61 AFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQKT-----GDSSFFGNSDEECE 120
AFFS SWRD F +RTYCS +G N+G DDA++E QKT GDSSFF N +E+ E
Sbjct: 61 AFFSSSSWRDSSFGCSVRTYCSDTYGRNNGLDDANDELQKTDLEDSGDSSFFRNPNEDYE 120
Query: 121 RDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFR 180
+DR ++FGDD+ EES++EE+EGGDV DD DLL SN+NHG+GNDFK+VEIGEDVFR
Sbjct: 121 KDRHFQFGDDIEAEESNDEEDEGGDV-DDAADLLWPNLSNKNHGQGNDFKRVEIGEDVFR 180
Query: 181 YPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRL 240
P VR+ CKLIQLSSSWNRKFE ELRHLVRSL+P Q+CAVLLS +DER++LRFFYWADRL
Sbjct: 181 SPSVRDTCKLIQLSSSWNRKFEGELRHLVRSLTPVQVCAVLLSLEDERLSLRFFYWADRL 240
Query: 241 WRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRD 300
WRYRHDSSVYLVML+ILS+TKLCQGAKRVLRLM+RRGIQLWPEAFGFVMVSYSRAGRLRD
Sbjct: 241 WRYRHDSSVYLVMLEILSRTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRD 300
Query: 301 AMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIK 360
AMKVLTLMQ AGVEPNLSICNTAIHILVVGNEL+KAL+FAERMVLIGI+PNVVTYNCLIK
Sbjct: 301 AMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIK 360
Query: 361 GYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLL 420
GYCN +QV+QAME+IDQM SKGCSPDKVSYYT MGFLCRDKR+NEIRELMKKM+ +SNLL
Sbjct: 361 GYCNTYQVDQAMEMIDQMPSKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMQTDSNLL 420
Query: 421 PDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKEL 480
PDHVTYNSLI MLSKHGHGDEALEILREAE LRFKVDKVEYSAIVHAYC+EG + KAKEL
Sbjct: 421 PDHVTYNSLIHMLSKHGHGDEALEILREAEALRFKVDKVEYSAIVHAYCREGKINKAKEL 480
Query: 481 VGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCR 540
VGEMFS GCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH CKPNAVTYT LLNGLCR
Sbjct: 481 VGEMFSNGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCR 540
Query: 541 NGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVE 600
NGKSLEAR+MMNMSEEEWWTPNAITYSVVVHGLRRE KLNEACD+VREMIGKGFFPNPVE
Sbjct: 541 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVE 600
Query: 601 INLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMY 660
INLL+QSLCR+GKPHEA QLLKECMNKGCAVN VN+TTVIHG+CQKDDLEAALSLLDDMY
Sbjct: 601 INLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 660
Query: 661 LCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
LCNKHPD++TYTTLIDALGKTGRIEEATE TMKMLRQGLVPSPVT+RSVIHQYCRKGRVE
Sbjct: 661 LCNKHPDTMTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 720
Query: 721 DLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMES 780
DLL LL KM +KSRFQTAYN VIEKLCKFG+LEEANSL+G+VLRTASRTDA+TCHVLMES
Sbjct: 721 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLLGKVLRTASRTDARTCHVLMES 780
Query: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVNS 840
YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSK+LL EG LEEADRLILRFVERGCV+S
Sbjct: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLIEGNLEEADRLILRFVERGCVSS 840
Query: 841 VQNNKHLQD 845
QN KHLQD
Sbjct: 841 -QNQKHLQD 847
BLAST of Sed0025020 vs. NCBI nr
Match:
XP_023543307.1 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1439.5 bits (3725), Expect = 0.0e+00
Identity = 717/849 (84.45%), Postives = 773/849 (91.05%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPITCSELR 60
MLFIFNYYYR GR+QIR HELN+L+K QK AN F+VNG VYKCFD F+ PI CSE+
Sbjct: 1 MLFIFNYYYRIGRRQIRVHELNYLNKFQKGGANFAFVVNGVVYKCFDRFTSQPIACSEVG 60
Query: 61 AFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQKT-----GDSSFFGNSDEECE 120
AFFS SWRD F RTYCS HG N+G DDA++E QKT GDSSFF N +E+ E
Sbjct: 61 AFFSSSSWRDSSFGCSSRTYCSDTHGRNNGLDDANDELQKTDLEDSGDSSFFENPNEDYE 120
Query: 121 RDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFR 180
+DR ++FGDD+ EES++EE+EGGDV DD D+L SN+NHG+GNDFK+VEIGEDVFR
Sbjct: 121 KDRHFQFGDDIDAEESNDEEDEGGDV-DDAADILWPNLSNKNHGQGNDFKRVEIGEDVFR 180
Query: 181 YPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRL 240
P VR+ CKLIQLSSSWNRKFE ELRHLVRSL+P Q+CAVLLS +DER++LRFFYWADRL
Sbjct: 181 SPSVRDTCKLIQLSSSWNRKFEGELRHLVRSLTPVQVCAVLLSLEDERLSLRFFYWADRL 240
Query: 241 WRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRD 300
WRYRHDSSVYLVML+ILS+TKLCQGAKRVLRLM+RRGIQLWPEAFGFVMVSYSRAGRLRD
Sbjct: 241 WRYRHDSSVYLVMLEILSRTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRD 300
Query: 301 AMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIK 360
AMKVLTLMQ AGVEPNLSICNTAIHILVVGNEL+KAL+FAERMVLIGI+PNVVTYNCLIK
Sbjct: 301 AMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIK 360
Query: 361 GYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLL 420
GYCN +QV+QAME+IDQM SKGCSPDKVSYYT MG LCRDKR+NEIRELMKKM+ +SNLL
Sbjct: 361 GYCNTYQVDQAMEMIDQMPSKGCSPDKVSYYTVMGCLCRDKRVNEIRELMKKMQTDSNLL 420
Query: 421 PDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKEL 480
PDHVTYNSLI MLSKHGHGDEALEILREAE LRFKVDKVE SAIVHAYC+EG + KAKEL
Sbjct: 421 PDHVTYNSLIHMLSKHGHGDEALEILREAEALRFKVDKVECSAIVHAYCREGKINKAKEL 480
Query: 481 VGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCR 540
VGEMFS GCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH CKPNAVTYT LLNGLCR
Sbjct: 481 VGEMFSNGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHNCKPNAVTYTTLLNGLCR 540
Query: 541 NGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVE 600
NG+SLEAR+MMNMSEEEWWTPNAITYSVVVHGLRRE KLNEACD+VREMIGKGFFPNPVE
Sbjct: 541 NGRSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVE 600
Query: 601 INLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMY 660
INLL+QSLCR+GKPHEA QLLKECMNKGCAVN VN+TTVIHG+CQKDDLEAALSLLDDMY
Sbjct: 601 INLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 660
Query: 661 LCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
LCNKHPD+VTYTTLIDALGKTGRIEEATE TMKMLRQGLVPSPVT+RSVIHQYCRKGRVE
Sbjct: 661 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 720
Query: 721 DLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMES 780
DLL LL KM +KSRFQTAYN VIEKLCKFG+LEEANSL+GEVLRTASRTDAKTCHVLMES
Sbjct: 721 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMES 780
Query: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVNS 840
YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSK+LL EG LEEADRLILRFVERGCV+S
Sbjct: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLIEGNLEEADRLILRFVERGCVSS 840
Query: 841 VQNNKHLQD 845
QN KHLQD
Sbjct: 841 -QNQKHLQD 847
BLAST of Sed0025020 vs. NCBI nr
Match:
XP_022977402.1 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1435.6 bits (3715), Expect = 0.0e+00
Identity = 714/849 (84.10%), Postives = 773/849 (91.05%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPITCSELR 60
MLFIFNYYYR GR+QIR HELN+L+K QK AN F+VNG VYKCFD F+ PI CSE+
Sbjct: 83 MLFIFNYYYRIGRRQIRVHELNYLNKFQKGGANFSFVVNGVVYKCFDRFTSQPIACSEVG 142
Query: 61 AFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQKT-----GDSSFFGNSDEECE 120
AFFS SWRD F LRTYCS +G N+G DD ++E QKT GDSSFFGN +E +
Sbjct: 143 AFFSSSSWRDSSFGCSLRTYCSDTYGRNNGLDDGNDELQKTDLENSGDSSFFGNPNENYK 202
Query: 121 RDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFR 180
+DR +++GDD+ EES++EE+EGGDV DD DLL SN+NHG+GNDFK+VEIGE+VFR
Sbjct: 203 KDRHFQYGDDIEAEESNDEEDEGGDV-DDAADLLWPNLSNKNHGQGNDFKRVEIGENVFR 262
Query: 181 YPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRL 240
P VR+ CKLIQLSSSWNRKFE ELRHLVRSL+P Q+CAVLLS +DER++LRFFYWADRL
Sbjct: 263 NPSVRDTCKLIQLSSSWNRKFEGELRHLVRSLTPVQVCAVLLSLEDERLSLRFFYWADRL 322
Query: 241 WRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRD 300
WRYRHDSSVYLVML+ILS+TKLCQGAKRVLRLM+RRGIQLWPEAFGFVMVSYSRAGRLRD
Sbjct: 323 WRYRHDSSVYLVMLEILSRTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRD 382
Query: 301 AMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIK 360
AMKVLTLMQ AGVEPNLSICNTAIHILVVGNEL+KAL+FAE MVLIGI+PNVVTYNCLIK
Sbjct: 383 AMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAECMVLIGIAPNVVTYNCLIK 442
Query: 361 GYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLL 420
GYCN +QV+QAME+IDQM SKGCSPDKVSYYT MGFLCRDKR+NEIRELMKKM+ +SNLL
Sbjct: 443 GYCNTYQVDQAMEMIDQMPSKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMQTDSNLL 502
Query: 421 PDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKEL 480
PDHVTYNSLI MLSKHGHGDEALEILREAE LRFKVDKVEYSAIVHAYC+EG +KKAKEL
Sbjct: 503 PDHVTYNSLIHMLSKHGHGDEALEILREAEALRFKVDKVEYSAIVHAYCREGKIKKAKEL 562
Query: 481 VGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCR 540
VGEMFS GCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH CKPNAVTYT LLNGLCR
Sbjct: 563 VGEMFSNGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCR 622
Query: 541 NGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVE 600
NGKSLEAR+MMNMS+EEWWTPNAITYSVVVHGLR E KLNEACD+VREMIGKGFFPNPVE
Sbjct: 623 NGKSLEARKMMNMSDEEWWTPNAITYSVVVHGLRWEGKLNEACDLVREMIGKGFFPNPVE 682
Query: 601 INLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMY 660
INLL+QSLCR+GKPHEA QLLKECMNKGCAVN VN+TTVIHG+CQKDDLEAALSLLDDMY
Sbjct: 683 INLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 742
Query: 661 LCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
LCNKHPD+VTYTTLIDALGKTGRIEEATE TMKMLRQGLVPSPVT+RSVIHQYCRKG+VE
Sbjct: 743 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGQVE 802
Query: 721 DLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMES 780
DLL LL KM +KSRFQTAYN VIEKLCKFG+LEEANSL+GEVLRTASR DAKTCHVLMES
Sbjct: 803 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRNDAKTCHVLMES 862
Query: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVNS 840
YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSK+LL EG LEEADRLILRFVERGCV+S
Sbjct: 863 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLMEGNLEEADRLILRFVERGCVSS 922
Query: 841 VQNNKHLQD 845
QN KHLQD
Sbjct: 923 -QNQKHLQD 929
BLAST of Sed0025020 vs. NCBI nr
Match:
XP_022146665.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])
HSP 1 Score: 1433.3 bits (3709), Expect = 0.0e+00
Identity = 716/851 (84.14%), Postives = 771/851 (90.60%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPI--TCSE 60
MLF+FNY YR GRKQIRFHELN+L K QK A F+VNG VYKCFD+ LHPI CSE
Sbjct: 1 MLFVFNYSYRIGRKQIRFHELNYLDKFQKGGAKYDFVVNGVVYKCFDNLCLHPIAVVCSE 60
Query: 61 LRAFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQKT-----GDSSFFGNSDEE 120
L AF SF SWRD F RC RTYCS ++G N+GFDD +EEF+KT G SSFFGN D +
Sbjct: 61 LGAFSSFSSWRDASFGRCFRTYCSDIYGSNNGFDDENEEFRKTDLVGSGVSSFFGNPDGD 120
Query: 121 CERDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDV 180
E+D+ +KFGDD+ ES++EEEEG DV DDDGDLL SNRNH +GNDFK+VEIG+
Sbjct: 121 YEKDQHFKFGDDIEGVESNDEEEEGVDV-DDDGDLLASNLSNRNHEQGNDFKRVEIGDGE 180
Query: 181 FRYPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWAD 240
FR+PLVR CKLIQL SSWNRK E ELRHLVRSLSPPQ+CAVLLSQDDER+ALRFFYWAD
Sbjct: 181 FRHPLVRETCKLIQLRSSWNRKLEGELRHLVRSLSPPQVCAVLLSQDDERIALRFFYWAD 240
Query: 241 RLWRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRL 300
RLWRYRHDSSVY VML+ILSKTKLCQGAKRVLRLM+RRGIQLWPEAFGFVMVSYSRAGRL
Sbjct: 241 RLWRYRHDSSVYSVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRL 300
Query: 301 RDAMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCL 360
RDAMKVLTLMQ AGVEP+LSICNTAIHILVVGN+L+KAL+FAERMVLIGI+PNVVTYNCL
Sbjct: 301 RDAMKVLTLMQKAGVEPSLSICNTAIHILVVGNKLEKALRFAERMVLIGIAPNVVTYNCL 360
Query: 361 IKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSN 420
IKG+CN HQV QAMELIDQM SKGCSPDKVSYYT MGFLCRDKRMNEIRELMKKMK + N
Sbjct: 361 IKGHCNVHQVEQAMELIDQMPSKGCSPDKVSYYTIMGFLCRDKRMNEIRELMKKMKRDGN 420
Query: 421 LLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAK 480
LLPDHVTYNSLIQMLSKHGH DEALEIL+EAEELRFKVDKVEYSAIVHAYCKEG +KKAK
Sbjct: 421 LLPDHVTYNSLIQMLSKHGHADEALEILKEAEELRFKVDKVEYSAIVHAYCKEGRIKKAK 480
Query: 481 ELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGL 540
E+VGEMFSKGC PDVVTYTSVLDGFCRIGKLDQAKK+MQQMYKH CKPNAVTYT LLNGL
Sbjct: 481 EIVGEMFSKGCVPDVVTYTSVLDGFCRIGKLDQAKKIMQQMYKHHCKPNAVTYTTLLNGL 540
Query: 541 CRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNP 600
CRNGKSL AREMMNMSEEEWWTPNAITYSVVVHGLRRE KL+EACDVVREMIGKGFFPNP
Sbjct: 541 CRNGKSLAAREMMNMSEEEWWTPNAITYSVVVHGLRREGKLSEACDVVREMIGKGFFPNP 600
Query: 601 VEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDD 660
VEINLL+QSLCR+GKP+EA+QLLKECMNKGCAVN VN+TTVIHGFCQKDDLEAALSLLDD
Sbjct: 601 VEINLLVQSLCRDGKPYEAEQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDD 660
Query: 661 MYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGR 720
MYLCNKHPD+VTYTTLIDALGKTGRIEEA+ELTMKMLRQGLVPSPVT+R+VIHQYC+ GR
Sbjct: 661 MYLCNKHPDTVTYTTLIDALGKTGRIEEASELTMKMLRQGLVPSPVTYRTVIHQYCQMGR 720
Query: 721 VEDLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLM 780
VEDLL LLKKM KS+F+TAYN VIEKLCKFG+LEEA+SL+ EVLRTASR DAKTCHVLM
Sbjct: 721 VEDLLILLKKMLLKSKFRTAYNLVIEKLCKFGYLEEADSLLCEVLRTASRIDAKTCHVLM 780
Query: 781 ESYLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCV 840
ESYLS GIPMSAYKVACRMFNRNLLPDLKLCEKVSK+LL EGKLEEADRLIL+FVERGCV
Sbjct: 781 ESYLSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLMEGKLEEADRLILQFVERGCV 840
Query: 841 NSVQNNKHLQD 845
S Q+ K+LQD
Sbjct: 841 -SAQDQKYLQD 849
BLAST of Sed0025020 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 276.9 bits (707), Expect = 7.4e-73
Identity = 160/536 (29.85%), Postives = 288/536 (53.73%), Query Frame = 0
Query: 245 YLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRDAMKVLTLMQ 304
Y V+L+IL + A V M R I FG VM ++ + A+ +L M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 305 MAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIKGYCNAHQVN 364
G PN I T IH L N + +AL+ E M L+G P+ T+N +I G C ++N
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 365 QAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLLPDHVTYNSL 424
+A +++++M +G +PD ++Y M LC+ R++ ++L ++ P+ V +N+L
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTL 364
Query: 425 IQMLSKHGHGDEALEILRE-AEELRFKVDKVEYSAIVHAYCKEGNVKKAKELVGEMFSKG 484
I HG D+A +L + D Y+++++ Y KEG V A E++ +M +KG
Sbjct: 365 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 424
Query: 485 CAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCRNGKSLEAR 544
C P+V +YT ++DGFC++GK+D+A ++ +M KPN V + L++ C+ + EA
Sbjct: 425 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 484
Query: 545 EMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVEINLLMQSL 604
E+ + P+ T++ ++ GL +++ A ++R+MI +G N V N L+ +
Sbjct: 485 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 544
Query: 605 CREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDS 664
R G+ EA++L+ E + +G ++ + Y ++I G C+ +++ A SL + M P +
Sbjct: 545 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604
Query: 665 VTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVEDLLNLLKK 724
++ LI+ L ++G +EEA E +M+ +G P VTF S+I+ CR GR+ED L + +K
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664
Query: 725 MHSKS--RFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMESYL 778
+ ++ +N ++ LCK GF+ +A L+ E + + +T +L++S +
Sbjct: 665 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
BLAST of Sed0025020 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 2.4e-71
Identity = 171/624 (27.40%), Postives = 313/624 (50.16%), Query Frame = 0
Query: 216 LLSQDDERVALRFFYWADRLWRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQL 275
L SQ D+ ALR F A + + + ++Y +L L ++ K++L M ++
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 276 WPEAFGFVMVSYSRAGRLRDAMKVLT-LMQMAGVEPNLSICNTAIHILVVGNELQKALKF 335
F ++ SY++ + + V+ ++ G++P+ N +++LV GN L+
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 336 AERMVLIGISPNVVTYNCLIKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCR 395
+M + GI P+V T+N LIK C AHQ+ A+ +++ M S G PD+ ++ T M
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 396 DKRMNEIRELMKKMKMNSNLLPDHVTYNSLIQMLSKHGHGDEALEILRE-AEELRFKVDK 455
+ ++ + ++M + +V+ N ++ K G ++AL ++E + + F D+
Sbjct: 237 EGDLDGALRIREQM-VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 296
Query: 456 VEYSAIVHAYCKEGNVKKAKELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQ 515
++ +V+ CK G+VK A E++ M +G PDV TY SV+ G C++G++ +A +++ Q
Sbjct: 297 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 356
Query: 516 MYKHQCKPNAVTYTALLNGLCRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEK 575
M C PN VTY L++ LC+ + EA E+ + + P+ T++ ++ GL
Sbjct: 357 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 416
Query: 576 LNEACDVVREMIGKGFFPNPVEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTT 635
A ++ EM KG P+ N+L+ SLC +GK EA +LK+ GCA + + Y T
Sbjct: 417 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 476
Query: 636 VIHGFCQKDDLEAALSLLDDMYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQG 695
+I GFC+ + A + D+M + +SVTY TLID L K+ R+E+A +L +M+ +G
Sbjct: 477 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 536
Query: 696 LVPSPVTFRSVIHQYCRKGRVEDLLNLLKKMHSKSRFQ--TAYNFVIEKLCKFGFLEEAN 755
P T+ S++ +CR G ++ ++++ M S Y +I LCK G +E A+
Sbjct: 537 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 596
Query: 756 SLIGEVLRTASRTDAKTCHVLMESYLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKL 815
L+ + + +++ A + M +N P + ++ +
Sbjct: 597 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 656
Query: 816 LKE--GKLEEADRLILRFVERGCV 834
L G + EA ++ +E+G V
Sbjct: 657 LCNGGGPIREAVDFLVELLEKGFV 679
BLAST of Sed0025020 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 2.4e-71
Identity = 173/579 (29.88%), Postives = 292/579 (50.43%), Query Frame = 0
Query: 220 DDERVALRFFYWADRLWRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEA 279
DDE +L F + SSV+ ++++ S+ L A ++ L G +
Sbjct: 112 DDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 171
Query: 280 FGFVMVSYSRAGR-LRDAMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERM 339
+ V+ + R+ R + A V M + V PN+ N I + AL ++M
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 340 VLIGISPNVVTYNCLIKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRM 399
G PNVVTYN LI GYC +++ +L+ M KG P+ +SY + LCR+ RM
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 400 NEIRELMKKMKMNSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSA 459
E+ ++ +M L D VTYN+LI+ K G+ +AL + E + Y++
Sbjct: 292 KEVSFVLTEMNRRGYSL-DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 351
Query: 460 IVHAYCKEGNVKKAKELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQ 519
++H+ CK GN+ +A E + +M +G P+ TYT+++DGF + G +++A +++++M +
Sbjct: 352 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 411
Query: 520 CKPNAVTYTALLNGLCRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEAC 579
P+ VTY AL+NG C GK +A ++ +E+ +P+ ++YS V+ G R ++EA
Sbjct: 412 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 471
Query: 580 DVVREMIGKGFFPNPVEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGF 639
V REM+ KG P+ + + L+Q C + + EA L +E + G + YT +I+ +
Sbjct: 472 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 531
Query: 640 CQKDDLEAALSLLDDMYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSP 699
C + DLE AL L ++M PD VTY+ LI+ L K R EA L +K+ + VPS
Sbjct: 532 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 591
Query: 700 VTFR---------------SVIHQYCRKGRVEDLLNLLKKMHSKSRFQ--TAYNFVIEKL 759
VT+ S+I +C KG + + + + M K+ TAYN +I
Sbjct: 592 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 651
Query: 760 CKFGFLEEANSLIGEVLRTASRTDAKTCHVLMESYLSAG 781
C+ G + +A +L E++++ T L+++ G
Sbjct: 652 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
BLAST of Sed0025020 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.5e-70
Identity = 142/471 (30.15%), Postives = 258/471 (54.78%), Query Frame = 0
Query: 289 RAGRLRDAMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVV 348
R G L + K L M G P++ C T I + +KA K E + G P+V+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 349 TYNCLIKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKM 408
TYN +I GYC A ++N A+ ++D+M SPD V+Y T + LC ++ + E++ +M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 233
Query: 409 KMNSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGN 468
+ + PD +TY LI+ + A+++L E + D V Y+ +V+ CKEG
Sbjct: 234 -LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 293
Query: 469 VKKAKELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTA 528
+ +A + + +M S GC P+V+T+ +L C G+ A+K++ M + P+ VT+
Sbjct: 294 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 353
Query: 529 LLNGLCRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKG 588
L+N LCR G A +++ + PN+++Y+ ++HG +E+K++ A + + M+ +G
Sbjct: 354 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 413
Query: 589 FFPNPVEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAAL 648
+P+ V N ++ +LC++GK +A ++L + +KGC+ + Y TVI G + A+
Sbjct: 414 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 473
Query: 649 SLLDDMYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQY 708
LLD+M + PD++TY++L+ L + G+++EA + + R G+ P+ VTF S++
Sbjct: 474 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 533
Query: 709 CRKGRVEDLLNLLKKMHSK--SRFQTAYNFVIEKLCKFGFLEEANSLIGEV 758
C+ + + ++ L M ++ +T+Y +IE L G +EA L+ E+
Sbjct: 534 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
BLAST of Sed0025020 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 266.9 bits (681), Expect = 7.6e-70
Identity = 146/473 (30.87%), Postives = 255/473 (53.91%), Query Frame = 0
Query: 289 RAGRLRDAMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVV 348
R+G +++ +L M G P++ +C I + KA++ E + G P+V
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 160
Query: 349 TYNCLIKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKM 408
YN LI G+C ++++ A ++D+M+SK SPD V+Y +G LC +++ +++ ++
Sbjct: 161 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 220
Query: 409 KMNSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGN 468
++ N P +TY LI+ G DEAL+++ E K D Y+ I+ CKEG
Sbjct: 221 -LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 280
Query: 469 VKKAKELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTA 528
V +A E+V + KGC PDV++Y +L GK ++ +K+M +M+ +C PN VTY+
Sbjct: 281 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 340
Query: 529 LLNGLCRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKG 588
L+ LCR+GK EA ++ + +E+ TP+A +Y ++ RE +L+ A + + MI G
Sbjct: 341 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 400
Query: 589 FFPNPVEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAAL 648
P+ V N ++ +LC+ GK +A ++ + GC+ N+ +Y T+ D AL
Sbjct: 401 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 460
Query: 649 SLLDDMYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQY 708
++ +M PD +TY ++I L + G ++EA EL + M PS VT+ V+ +
Sbjct: 461 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 520
Query: 709 CRKGRVEDLLNLLKKM--HSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLR 760
C+ R+ED +N+L+ M + +T Y +IE + G+ EA L +++R
Sbjct: 521 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
BLAST of Sed0025020 vs. ExPASy TrEMBL
Match:
A0A6J1IIC2 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477747 PE=4 SV=1)
HSP 1 Score: 1435.6 bits (3715), Expect = 0.0e+00
Identity = 714/849 (84.10%), Postives = 773/849 (91.05%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPITCSELR 60
MLFIFNYYYR GR+QIR HELN+L+K QK AN F+VNG VYKCFD F+ PI CSE+
Sbjct: 83 MLFIFNYYYRIGRRQIRVHELNYLNKFQKGGANFSFVVNGVVYKCFDRFTSQPIACSEVG 142
Query: 61 AFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQKT-----GDSSFFGNSDEECE 120
AFFS SWRD F LRTYCS +G N+G DD ++E QKT GDSSFFGN +E +
Sbjct: 143 AFFSSSSWRDSSFGCSLRTYCSDTYGRNNGLDDGNDELQKTDLENSGDSSFFGNPNENYK 202
Query: 121 RDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFR 180
+DR +++GDD+ EES++EE+EGGDV DD DLL SN+NHG+GNDFK+VEIGE+VFR
Sbjct: 203 KDRHFQYGDDIEAEESNDEEDEGGDV-DDAADLLWPNLSNKNHGQGNDFKRVEIGENVFR 262
Query: 181 YPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRL 240
P VR+ CKLIQLSSSWNRKFE ELRHLVRSL+P Q+CAVLLS +DER++LRFFYWADRL
Sbjct: 263 NPSVRDTCKLIQLSSSWNRKFEGELRHLVRSLTPVQVCAVLLSLEDERLSLRFFYWADRL 322
Query: 241 WRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRD 300
WRYRHDSSVYLVML+ILS+TKLCQGAKRVLRLM+RRGIQLWPEAFGFVMVSYSRAGRLRD
Sbjct: 323 WRYRHDSSVYLVMLEILSRTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRD 382
Query: 301 AMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIK 360
AMKVLTLMQ AGVEPNLSICNTAIHILVVGNEL+KAL+FAE MVLIGI+PNVVTYNCLIK
Sbjct: 383 AMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAECMVLIGIAPNVVTYNCLIK 442
Query: 361 GYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLL 420
GYCN +QV+QAME+IDQM SKGCSPDKVSYYT MGFLCRDKR+NEIRELMKKM+ +SNLL
Sbjct: 443 GYCNTYQVDQAMEMIDQMPSKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMQTDSNLL 502
Query: 421 PDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKEL 480
PDHVTYNSLI MLSKHGHGDEALEILREAE LRFKVDKVEYSAIVHAYC+EG +KKAKEL
Sbjct: 503 PDHVTYNSLIHMLSKHGHGDEALEILREAEALRFKVDKVEYSAIVHAYCREGKIKKAKEL 562
Query: 481 VGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCR 540
VGEMFS GCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH CKPNAVTYT LLNGLCR
Sbjct: 563 VGEMFSNGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCR 622
Query: 541 NGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVE 600
NGKSLEAR+MMNMS+EEWWTPNAITYSVVVHGLR E KLNEACD+VREMIGKGFFPNPVE
Sbjct: 623 NGKSLEARKMMNMSDEEWWTPNAITYSVVVHGLRWEGKLNEACDLVREMIGKGFFPNPVE 682
Query: 601 INLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMY 660
INLL+QSLCR+GKPHEA QLLKECMNKGCAVN VN+TTVIHG+CQKDDLEAALSLLDDMY
Sbjct: 683 INLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 742
Query: 661 LCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
LCNKHPD+VTYTTLIDALGKTGRIEEATE TMKMLRQGLVPSPVT+RSVIHQYCRKG+VE
Sbjct: 743 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGQVE 802
Query: 721 DLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMES 780
DLL LL KM +KSRFQTAYN VIEKLCKFG+LEEANSL+GEVLRTASR DAKTCHVLMES
Sbjct: 803 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRNDAKTCHVLMES 862
Query: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVNS 840
YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSK+LL EG LEEADRLILRFVERGCV+S
Sbjct: 863 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLMEGNLEEADRLILRFVERGCVSS 922
Query: 841 VQNNKHLQD 845
QN KHLQD
Sbjct: 923 -QNQKHLQD 929
BLAST of Sed0025020 vs. ExPASy TrEMBL
Match:
A0A6J1CXV8 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111015813 PE=4 SV=1)
HSP 1 Score: 1433.3 bits (3709), Expect = 0.0e+00
Identity = 716/851 (84.14%), Postives = 771/851 (90.60%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPI--TCSE 60
MLF+FNY YR GRKQIRFHELN+L K QK A F+VNG VYKCFD+ LHPI CSE
Sbjct: 1 MLFVFNYSYRIGRKQIRFHELNYLDKFQKGGAKYDFVVNGVVYKCFDNLCLHPIAVVCSE 60
Query: 61 LRAFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQKT-----GDSSFFGNSDEE 120
L AF SF SWRD F RC RTYCS ++G N+GFDD +EEF+KT G SSFFGN D +
Sbjct: 61 LGAFSSFSSWRDASFGRCFRTYCSDIYGSNNGFDDENEEFRKTDLVGSGVSSFFGNPDGD 120
Query: 121 CERDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDV 180
E+D+ +KFGDD+ ES++EEEEG DV DDDGDLL SNRNH +GNDFK+VEIG+
Sbjct: 121 YEKDQHFKFGDDIEGVESNDEEEEGVDV-DDDGDLLASNLSNRNHEQGNDFKRVEIGDGE 180
Query: 181 FRYPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWAD 240
FR+PLVR CKLIQL SSWNRK E ELRHLVRSLSPPQ+CAVLLSQDDER+ALRFFYWAD
Sbjct: 181 FRHPLVRETCKLIQLRSSWNRKLEGELRHLVRSLSPPQVCAVLLSQDDERIALRFFYWAD 240
Query: 241 RLWRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRL 300
RLWRYRHDSSVY VML+ILSKTKLCQGAKRVLRLM+RRGIQLWPEAFGFVMVSYSRAGRL
Sbjct: 241 RLWRYRHDSSVYSVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRL 300
Query: 301 RDAMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCL 360
RDAMKVLTLMQ AGVEP+LSICNTAIHILVVGN+L+KAL+FAERMVLIGI+PNVVTYNCL
Sbjct: 301 RDAMKVLTLMQKAGVEPSLSICNTAIHILVVGNKLEKALRFAERMVLIGIAPNVVTYNCL 360
Query: 361 IKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSN 420
IKG+CN HQV QAMELIDQM SKGCSPDKVSYYT MGFLCRDKRMNEIRELMKKMK + N
Sbjct: 361 IKGHCNVHQVEQAMELIDQMPSKGCSPDKVSYYTIMGFLCRDKRMNEIRELMKKMKRDGN 420
Query: 421 LLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAK 480
LLPDHVTYNSLIQMLSKHGH DEALEIL+EAEELRFKVDKVEYSAIVHAYCKEG +KKAK
Sbjct: 421 LLPDHVTYNSLIQMLSKHGHADEALEILKEAEELRFKVDKVEYSAIVHAYCKEGRIKKAK 480
Query: 481 ELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGL 540
E+VGEMFSKGC PDVVTYTSVLDGFCRIGKLDQAKK+MQQMYKH CKPNAVTYT LLNGL
Sbjct: 481 EIVGEMFSKGCVPDVVTYTSVLDGFCRIGKLDQAKKIMQQMYKHHCKPNAVTYTTLLNGL 540
Query: 541 CRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNP 600
CRNGKSL AREMMNMSEEEWWTPNAITYSVVVHGLRRE KL+EACDVVREMIGKGFFPNP
Sbjct: 541 CRNGKSLAAREMMNMSEEEWWTPNAITYSVVVHGLRREGKLSEACDVVREMIGKGFFPNP 600
Query: 601 VEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDD 660
VEINLL+QSLCR+GKP+EA+QLLKECMNKGCAVN VN+TTVIHGFCQKDDLEAALSLLDD
Sbjct: 601 VEINLLVQSLCRDGKPYEAEQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDD 660
Query: 661 MYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGR 720
MYLCNKHPD+VTYTTLIDALGKTGRIEEA+ELTMKMLRQGLVPSPVT+R+VIHQYC+ GR
Sbjct: 661 MYLCNKHPDTVTYTTLIDALGKTGRIEEASELTMKMLRQGLVPSPVTYRTVIHQYCQMGR 720
Query: 721 VEDLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLM 780
VEDLL LLKKM KS+F+TAYN VIEKLCKFG+LEEA+SL+ EVLRTASR DAKTCHVLM
Sbjct: 721 VEDLLILLKKMLLKSKFRTAYNLVIEKLCKFGYLEEADSLLCEVLRTASRIDAKTCHVLM 780
Query: 781 ESYLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCV 840
ESYLS GIPMSAYKVACRMFNRNLLPDLKLCEKVSK+LL EGKLEEADRLIL+FVERGCV
Sbjct: 781 ESYLSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLMEGKLEEADRLILQFVERGCV 840
Query: 841 NSVQNNKHLQD 845
S Q+ K+LQD
Sbjct: 841 -SAQDQKYLQD 849
BLAST of Sed0025020 vs. ExPASy TrEMBL
Match:
A0A6J1EJG8 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433162 PE=4 SV=1)
HSP 1 Score: 1429.8 bits (3700), Expect = 0.0e+00
Identity = 713/849 (83.98%), Postives = 771/849 (90.81%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPITCSELR 60
MLFIFNYYYR GR+QIR HELN+L+K +K AN F+VN VYKCFD F+ PI CSE+
Sbjct: 1 MLFIFNYYYRIGRRQIRVHELNYLNKFRKGGANFAFVVNEVVYKCFDRFTSQPIACSEVG 60
Query: 61 AFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQKT-----GDSSFFGNSDEECE 120
AFFS SWRD F +RTYCS +G N+G DDA++E QKT GDSSFF N +E+ E
Sbjct: 61 AFFSSSSWRDSSFGCSVRTYCSDTYGRNNGLDDANDELQKTDLEDSGDSSFFRNPNEDYE 120
Query: 121 RDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFR 180
+DR ++FGDD+ EES++E++EG DD DLL SN+NHG+GNDFK+VEIGEDVFR
Sbjct: 121 KDRHFQFGDDIEAEESNDEDDEGH--VDDAADLLWPNLSNKNHGQGNDFKRVEIGEDVFR 180
Query: 181 YPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRL 240
P VR+ CKLIQLSSSWNRKFE ELRHLVRSL+P Q+CAVLLS +DER++LRFFYWADRL
Sbjct: 181 SPSVRDTCKLIQLSSSWNRKFEGELRHLVRSLTPVQVCAVLLSLEDERLSLRFFYWADRL 240
Query: 241 WRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRD 300
WRYRHDSSVYLVML+ILS+TKLCQGAKRVLRLM+RRGIQLWPEAFGFVMVSYSRAGRLRD
Sbjct: 241 WRYRHDSSVYLVMLEILSRTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRD 300
Query: 301 AMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIK 360
AMKVLTLMQ AGVEPNLSICNTAIHILVVGNEL+KAL+FAERMVLIGI+PNVVTYNCLIK
Sbjct: 301 AMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIK 360
Query: 361 GYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLL 420
GYCN +QV+QAME+IDQM SKGCSPDKVSYYT MGFLCRDKR+NEIRELMKKM+ +SNLL
Sbjct: 361 GYCNTYQVDQAMEMIDQMPSKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMQTDSNLL 420
Query: 421 PDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKEL 480
PDHVTYNSLI MLSKHGHGDEALEILREAE LRFKVDKVEYSAIVHAYC+EG + KAKEL
Sbjct: 421 PDHVTYNSLIHMLSKHGHGDEALEILREAEALRFKVDKVEYSAIVHAYCREGKINKAKEL 480
Query: 481 VGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCR 540
VGEM S GCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH CKPNAVTYT LLNGLCR
Sbjct: 481 VGEMLSNGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCR 540
Query: 541 NGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVE 600
NGKSLEAR+MMNMSEEEWWTPNAITYSVVVHGLRRE KLNEACD+VREMIGKGFFPNPVE
Sbjct: 541 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVE 600
Query: 601 INLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMY 660
INLL+QSLCR+GKPHEA QLLKECMNKGCAVN VN+TTVIHG+CQKDDLEAALSLLDDMY
Sbjct: 601 INLLVQSLCRDGKPHEATQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMY 660
Query: 661 LCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
LCNKHPD+VTYTTLIDALGKTGRIEEATE TMKMLRQGLVPSPVT+RSVIHQYCRKGRVE
Sbjct: 661 LCNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 720
Query: 721 DLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMES 780
DLL LL KM +KSRFQTAYN VIEKLCKFG+LEEANSL+GEVLRTASRTDAKTCHVLMES
Sbjct: 721 DLLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMES 780
Query: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVNS 840
YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSK+LL EG LEEADRLILRFVERGCV+S
Sbjct: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLIEGNLEEADRLILRFVERGCVSS 840
Query: 841 VQNNKHLQD 845
QN KHLQD
Sbjct: 841 -QNQKHLQD 846
BLAST of Sed0025020 vs. ExPASy TrEMBL
Match:
A0A5D3CSD4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009280 PE=4 SV=1)
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 704/849 (82.92%), Postives = 769/849 (90.58%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPITCSELR 60
MLFI N+Y++ GR+QIRFHELN+ +K +K ANS F++NG VY+CF HF LHP+ C+EL
Sbjct: 1 MLFILNFYFKIGRRQIRFHELNYPNKFKKGGANSDFVLNGVVYQCFGHFCLHPLACTELG 60
Query: 61 AFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQK-----TGDSSFFGNSDEECE 120
AFFS SWRD F R LRTYC+ ++G N+ D A++EFQK TGDSS FGN EE
Sbjct: 61 AFFSSSSWRDSSFGRSLRTYCTDIYGRNNASDAANDEFQKTDLEDTGDSSLFGNPSEEHG 120
Query: 121 RDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFR 180
++R +KFGDD+ EES++EEEE GD+ D DLLG SNRNHG GNDFKKVEIGEDV R
Sbjct: 121 KERHFKFGDDIEAEESNDEEEEDGDL-GDAADLLGSNLSNRNHGRGNDFKKVEIGEDVLR 180
Query: 181 YPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRL 240
+ LVR+ CKLIQLS+SWNRKFE ELR+LVRSL+P Q+CAVLLSQ+DER+ALRFFYWADRL
Sbjct: 181 HSLVRDTCKLIQLSTSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERIALRFFYWADRL 240
Query: 241 WRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRD 300
WRYRHDSSVYLVML+ILSKTKLCQGAKRVLRLM+RRGIQL PEAFGFVMVSYSRAGRLRD
Sbjct: 241 WRYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLCPEAFGFVMVSYSRAGRLRD 300
Query: 301 AMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIK 360
AMKVLTLMQ AGVEPNLSICNTAIHILV+GNEL+KAL+FAERMVLIGI+PNVVTYNCLIK
Sbjct: 301 AMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIK 360
Query: 361 GYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLL 420
GYCN HQV+QAMELIDQM S GCSPDKVSYY+ MGFLCRDKR+NEIRELMKKM +SNL+
Sbjct: 361 GYCNVHQVDQAMELIDQMPSNGCSPDKVSYYSVMGFLCRDKRLNEIRELMKKMHKDSNLV 420
Query: 421 PDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKEL 480
PDHVTYNSLIQMLSKH HGDEALEI+REAE+L+FKVDKVEYSAIVHAYCKEG ++KAKEL
Sbjct: 421 PDHVTYNSLIQMLSKHSHGDEALEIMREAEKLQFKVDKVEYSAIVHAYCKEGKIQKAKEL 480
Query: 481 VGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCR 540
V EMFSKGC PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH CKPNAVTYT LLNGLCR
Sbjct: 481 VSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCR 540
Query: 541 NGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVE 600
NGKSLEAR+MMNMSEEEWWTPNAITYSVVVHGLRRE KLNEACDVVREMIGKGFFPNPVE
Sbjct: 541 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 600
Query: 601 INLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMY 660
INLL+ SLCR+GKP+EA QLLKECMNKGCAVN VN+TTVIHGFCQKDDLEAALSLLDDMY
Sbjct: 601 INLLVHSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 660
Query: 661 LCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
LCNKHPD+VTYTTLIDALGKT RIEEATELTMKMLRQGLVPSPVT+RSVIHQYCRKGRVE
Sbjct: 661 LCNKHPDTVTYTTLIDALGKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 720
Query: 721 DLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMES 780
DLL LLKKM KSRFQTAYN VIEKLCKFG+LEEANSL+GEVLRTASRTDAKTCHVLMES
Sbjct: 721 DLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMES 780
Query: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVNS 840
YL+ GIPMSAYKVACRMFNRNL+PDLKLCEKVSK+L+ EGKLEEADRL+LRFVERG V S
Sbjct: 781 YLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVLEGKLEEADRLVLRFVERGHV-S 840
Query: 841 VQNNKHLQD 845
Q +KHL +
Sbjct: 841 AQESKHLHN 847
BLAST of Sed0025020 vs. ExPASy TrEMBL
Match:
A0A1S3AYP8 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103484342 PE=4 SV=1)
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 704/849 (82.92%), Postives = 768/849 (90.46%), Query Frame = 0
Query: 1 MLFIFNYYYRFGRKQIRFHELNFLSKIQKSSANSVFLVNGDVYKCFDHFSLHPITCSELR 60
M FI N+Y++ GR+QIRFHELN+ +K +K ANS F++NG VY+CF HF LHP+ C+EL
Sbjct: 1 MFFILNFYFKIGRRQIRFHELNYPNKFKKGGANSDFVLNGVVYQCFGHFCLHPLACTELG 60
Query: 61 AFFSFFSWRDLGFYRCLRTYCSYVHGGNHGFDDASEEFQK-----TGDSSFFGNSDEECE 120
AFFS SWRD F R LRTYC+ ++G N+ D A++EFQK TGDSS FGN EE
Sbjct: 61 AFFSSSSWRDSSFDRSLRTYCTDIYGRNNASDAANDEFQKTDLEDTGDSSLFGNPSEEHG 120
Query: 121 RDRDYKFGDDLVDEESSEEEEEGGDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFR 180
++R +KFGDD+ EES++EEEE GD+ D DLLG SNRNHG GNDFKKVEIGEDV R
Sbjct: 121 KERHFKFGDDIEAEESNDEEEEDGDL-GDAADLLGSNLSNRNHGRGNDFKKVEIGEDVLR 180
Query: 181 YPLVRNACKLIQLSSSWNRKFEAELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRL 240
+ LVR+ CKLIQLS+SWNRKFE ELR+LVRSL+P Q+CAVLLSQ+DER+ALRFFYWADRL
Sbjct: 181 HSLVRDTCKLIQLSTSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERIALRFFYWADRL 240
Query: 241 WRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRD 300
WRYRHDSSVYLVML+ILSKTKLCQGAKRVLRLM+RRGIQL PEAFGFVMVSYSRAGRLRD
Sbjct: 241 WRYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLCPEAFGFVMVSYSRAGRLRD 300
Query: 301 AMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIK 360
AMKVLTLMQ AGVEPNLSICNTAIHILV+GNEL+KAL+FAERMVLIGI+PNVVTYNCLIK
Sbjct: 301 AMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIK 360
Query: 361 GYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLL 420
GYCN HQV+QAMELIDQM S GCSPDKVSYY+ MGFLCRDKR+NEIRELMKKM +SNL+
Sbjct: 361 GYCNVHQVDQAMELIDQMPSNGCSPDKVSYYSVMGFLCRDKRLNEIRELMKKMHKDSNLV 420
Query: 421 PDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKEL 480
PDHVTYNSLIQMLSKH HGDEALEI+REAE+LRFKVDKVEYSAIVHAYCKEG ++KAKEL
Sbjct: 421 PDHVTYNSLIQMLSKHSHGDEALEIMREAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKEL 480
Query: 481 VGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCR 540
V EMFSKGC PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH CKPNAVTYT LLNGLCR
Sbjct: 481 VSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCR 540
Query: 541 NGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVE 600
NGKSLEAR+MMNMSEEEWWTPNAITYSVVVHGLRRE KLNEACDVVREMIGKGFFPNPVE
Sbjct: 541 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 600
Query: 601 INLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMY 660
INLL+ SLCR+GKP+EA QLLKECMNKGCAVN VN+TTVIHGFCQKDDLEAALSLLDDMY
Sbjct: 601 INLLVHSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 660
Query: 661 LCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVE 720
LCNKHPD+VTYTTLIDALGKT RIEEATELTMKMLRQGLVPSPVT+RSVIHQYCRKGRVE
Sbjct: 661 LCNKHPDTVTYTTLIDALGKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 720
Query: 721 DLLNLLKKMHSKSRFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMES 780
DLL LLKKM KSRFQTAYN VIEKLCKFG+LEEANSL+GEVLRTASRTDAKTCHVLMES
Sbjct: 721 DLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMES 780
Query: 781 YLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVNS 840
YL+ GIPMSAYKVACRMFNRNL+PDLKLCEKVSK+L+ EGKLEEADRL+LRFVERG V S
Sbjct: 781 YLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVLEGKLEEADRLVLRFVERGHV-S 840
Query: 841 VQNNKHLQD 845
Q +KHL +
Sbjct: 841 AQESKHLHN 847
BLAST of Sed0025020 vs. TAIR 10
Match:
AT1G30290.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 944.5 bits (2440), Expect = 5.8e-275
Identity = 468/757 (61.82%), Postives = 597/757 (78.86%), Query Frame = 0
Query: 92 DDASEEFQKTGDSSFFGNS---------DEECERDRDYKFGD-DLVDEESSEEE---EEG 151
DD EF++ G FG S D E R+ +F + D + E+ +EE G
Sbjct: 51 DDHFGEFRQLG----FGKSSALNATSVGDPEFGEIRNPRFNEIDELGEDDDDEEGNVTSG 110
Query: 152 GDVDDDDGDLLGYKFSNRNHGEGNDFKKVEIGEDVFRYPLVRNACKLIQLSSSWNRKFEA 211
++DDD+ K ++ E F ++ ED R+PLVR +LI L SSWN K E
Sbjct: 111 DELDDDNDGFAVLKSIPQSREEAGRF---DVEEDESRHPLVREVGRLIGLRSSWNPKHEG 170
Query: 212 ELRHLVRSLSPPQICAVLLSQDDERVALRFFYWADRLWRYRHDSSVYLVMLQILSKTKLC 271
++R+L+RSL P Q+CAVL SQDDERVAL+FFYWADR WRYRHD VY ML++LSKTKLC
Sbjct: 171 QMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLC 230
Query: 272 QGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRDAMKVLTLMQMAGVEPNLSICNTA 331
QG++RVL LM RRGI PEAF VMVSYSRAG+LRDA+KVLTLMQ AGVEPNL ICNT
Sbjct: 231 QGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTT 290
Query: 332 IHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIKGYCNAHQVNQAMELIDQMQSKGC 391
I + V N L+KAL+F ERM ++GI PNVVTYNC+I+GYC+ H+V +A+EL++ M SKGC
Sbjct: 291 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC 350
Query: 392 SPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLLPDHVTYNSLIQMLSKHGHGDEAL 451
PDKVSYYT MG+LC++KR+ E+R+LMKKM L+PD VTYN+LI ML+KH H DEAL
Sbjct: 351 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL 410
Query: 452 EILREAEELRFKVDKVEYSAIVHAYCKEGNVKKAKELVGEMFSKG-CAPDVVTYTSVLDG 511
L++A+E F++DK+ YSAIVHA CKEG + +AK+L+ EM SKG C PDVVTYT+V++G
Sbjct: 411 WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNG 470
Query: 512 FCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCRNGKSLEAREMMNMSEEEWWTPN 571
FCR+G++D+AKK++Q M+ H KPN V+YTALLNG+CR GKSLEAREMMNMSEE WW+PN
Sbjct: 471 FCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPN 530
Query: 572 AITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVEINLLMQSLCREGKPHEAKQLLK 631
+ITYSV++HGLRRE KL+EACDVVREM+ KGFFP PVEINLL+QSLCR+G+ HEA++ ++
Sbjct: 531 SITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFME 590
Query: 632 ECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDSVTYTTLIDALGKTG 691
EC+NKGCA+N VN+TTVIHGFCQ D+L+AALS+LDDMYL NKH D TYTTL+D LGK G
Sbjct: 591 ECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKG 650
Query: 692 RIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVEDLLNLLKKMHSKSRFQTAYNFV 751
RI EATEL KML +G+ P+PVT+R+VIH+YC+ G+V+DL+ +L+KM S+ + +T YN V
Sbjct: 651 RIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQV 710
Query: 752 IEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMESYLSAGIPMSAYKVACRMFNRNL 811
IEKLC G LEEA++L+G+VLRTASR+DAKTC+ LME YL G+P+SAYKVACRMFNRNL
Sbjct: 711 IEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNL 770
Query: 812 LPDLKLCEKVSKKLLKEGKLEEADRLILRFVERGCVN 835
+PD+K+CEK+SK+L+ +GK++EAD+L+LR VERG ++
Sbjct: 771 IPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHIS 800
BLAST of Sed0025020 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 276.9 bits (707), Expect = 5.2e-74
Identity = 160/536 (29.85%), Postives = 288/536 (53.73%), Query Frame = 0
Query: 245 YLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEAFGFVMVSYSRAGRLRDAMKVLTLMQ 304
Y V+L+IL + A V M R I FG VM ++ + A+ +L M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 305 MAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVVTYNCLIKGYCNAHQVN 364
G PN I T IH L N + +AL+ E M L+G P+ T+N +I G C ++N
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 365 QAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKMKMNSNLLPDHVTYNSL 424
+A +++++M +G +PD ++Y M LC+ R++ ++L ++ P+ V +N+L
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTL 364
Query: 425 IQMLSKHGHGDEALEILRE-AEELRFKVDKVEYSAIVHAYCKEGNVKKAKELVGEMFSKG 484
I HG D+A +L + D Y+++++ Y KEG V A E++ +M +KG
Sbjct: 365 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 424
Query: 485 CAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTALLNGLCRNGKSLEAR 544
C P+V +YT ++DGFC++GK+D+A ++ +M KPN V + L++ C+ + EA
Sbjct: 425 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 484
Query: 545 EMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKGFFPNPVEINLLMQSL 604
E+ + P+ T++ ++ GL +++ A ++R+MI +G N V N L+ +
Sbjct: 485 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 544
Query: 605 CREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDS 664
R G+ EA++L+ E + +G ++ + Y ++I G C+ +++ A SL + M P +
Sbjct: 545 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604
Query: 665 VTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVEDLLNLLKK 724
++ LI+ L ++G +EEA E +M+ +G P VTF S+I+ CR GR+ED L + +K
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664
Query: 725 MHSKS--RFQTAYNFVIEKLCKFGFLEEANSLIGEVLRTASRTDAKTCHVLMESYL 778
+ ++ +N ++ LCK GF+ +A L+ E + + +T +L++S +
Sbjct: 665 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
BLAST of Sed0025020 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 271.9 bits (694), Expect = 1.7e-72
Identity = 171/624 (27.40%), Postives = 313/624 (50.16%), Query Frame = 0
Query: 216 LLSQDDERVALRFFYWADRLWRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQL 275
L SQ D+ ALR F A + + + ++Y +L L ++ K++L M ++
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 276 WPEAFGFVMVSYSRAGRLRDAMKVLT-LMQMAGVEPNLSICNTAIHILVVGNELQKALKF 335
F ++ SY++ + + V+ ++ G++P+ N +++LV GN L+
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 336 AERMVLIGISPNVVTYNCLIKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCR 395
+M + GI P+V T+N LIK C AHQ+ A+ +++ M S G PD+ ++ T M
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 396 DKRMNEIRELMKKMKMNSNLLPDHVTYNSLIQMLSKHGHGDEALEILRE-AEELRFKVDK 455
+ ++ + ++M + +V+ N ++ K G ++AL ++E + + F D+
Sbjct: 237 EGDLDGALRIREQM-VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 296
Query: 456 VEYSAIVHAYCKEGNVKKAKELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQ 515
++ +V+ CK G+VK A E++ M +G PDV TY SV+ G C++G++ +A +++ Q
Sbjct: 297 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 356
Query: 516 MYKHQCKPNAVTYTALLNGLCRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEK 575
M C PN VTY L++ LC+ + EA E+ + + P+ T++ ++ GL
Sbjct: 357 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 416
Query: 576 LNEACDVVREMIGKGFFPNPVEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTT 635
A ++ EM KG P+ N+L+ SLC +GK EA +LK+ GCA + + Y T
Sbjct: 417 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 476
Query: 636 VIHGFCQKDDLEAALSLLDDMYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQG 695
+I GFC+ + A + D+M + +SVTY TLID L K+ R+E+A +L +M+ +G
Sbjct: 477 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 536
Query: 696 LVPSPVTFRSVIHQYCRKGRVEDLLNLLKKMHSKSRFQ--TAYNFVIEKLCKFGFLEEAN 755
P T+ S++ +CR G ++ ++++ M S Y +I LCK G +E A+
Sbjct: 537 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 596
Query: 756 SLIGEVLRTASRTDAKTCHVLMESYLSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKKL 815
L+ + + +++ A + M +N P + ++ +
Sbjct: 597 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 656
Query: 816 LKE--GKLEEADRLILRFVERGCV 834
L G + EA ++ +E+G V
Sbjct: 657 LCNGGGPIREAVDFLVELLEKGFV 679
BLAST of Sed0025020 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 271.9 bits (694), Expect = 1.7e-72
Identity = 173/579 (29.88%), Postives = 292/579 (50.43%), Query Frame = 0
Query: 220 DDERVALRFFYWADRLWRYRHDSSVYLVMLQILSKTKLCQGAKRVLRLMSRRGIQLWPEA 279
DDE +L F + SSV+ ++++ S+ L A ++ L G +
Sbjct: 112 DDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLS 171
Query: 280 FGFVMVSYSRAGR-LRDAMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERM 339
+ V+ + R+ R + A V M + V PN+ N I + AL ++M
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 340 VLIGISPNVVTYNCLIKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRM 399
G PNVVTYN LI GYC +++ +L+ M KG P+ +SY + LCR+ RM
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 400 NEIRELMKKMKMNSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSA 459
E+ ++ +M L D VTYN+LI+ K G+ +AL + E + Y++
Sbjct: 292 KEVSFVLTEMNRRGYSL-DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 351
Query: 460 IVHAYCKEGNVKKAKELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQ 519
++H+ CK GN+ +A E + +M +G P+ TYT+++DGF + G +++A +++++M +
Sbjct: 352 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 411
Query: 520 CKPNAVTYTALLNGLCRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEAC 579
P+ VTY AL+NG C GK +A ++ +E+ +P+ ++YS V+ G R ++EA
Sbjct: 412 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 471
Query: 580 DVVREMIGKGFFPNPVEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGF 639
V REM+ KG P+ + + L+Q C + + EA L +E + G + YT +I+ +
Sbjct: 472 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 531
Query: 640 CQKDDLEAALSLLDDMYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSP 699
C + DLE AL L ++M PD VTY+ LI+ L K R EA L +K+ + VPS
Sbjct: 532 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 591
Query: 700 VTFR---------------SVIHQYCRKGRVEDLLNLLKKMHSKSRFQ--TAYNFVIEKL 759
VT+ S+I +C KG + + + + M K+ TAYN +I
Sbjct: 592 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 651
Query: 760 CKFGFLEEANSLIGEVLRTASRTDAKTCHVLMESYLSAG 781
C+ G + +A +L E++++ T L+++ G
Sbjct: 652 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
BLAST of Sed0025020 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 269.2 bits (687), Expect = 1.1e-71
Identity = 142/471 (30.15%), Postives = 258/471 (54.78%), Query Frame = 0
Query: 289 RAGRLRDAMKVLTLMQMAGVEPNLSICNTAIHILVVGNELQKALKFAERMVLIGISPNVV 348
R G L + K L M G P++ C T I + +KA K E + G P+V+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 349 TYNCLIKGYCNAHQVNQAMELIDQMQSKGCSPDKVSYYTAMGFLCRDKRMNEIRELMKKM 408
TYN +I GYC A ++N A+ ++D+M SPD V+Y T + LC ++ + E++ +M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 233
Query: 409 KMNSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGN 468
+ + PD +TY LI+ + A+++L E + D V Y+ +V+ CKEG
Sbjct: 234 -LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 293
Query: 469 VKKAKELVGEMFSKGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHQCKPNAVTYTA 528
+ +A + + +M S GC P+V+T+ +L C G+ A+K++ M + P+ VT+
Sbjct: 294 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 353
Query: 529 LLNGLCRNGKSLEAREMMNMSEEEWWTPNAITYSVVVHGLRREEKLNEACDVVREMIGKG 588
L+N LCR G A +++ + PN+++Y+ ++HG +E+K++ A + + M+ +G
Sbjct: 354 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 413
Query: 589 FFPNPVEINLLMQSLCREGKPHEAKQLLKECMNKGCAVNAVNYTTVIHGFCQKDDLEAAL 648
+P+ V N ++ +LC++GK +A ++L + +KGC+ + Y TVI G + A+
Sbjct: 414 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 473
Query: 649 SLLDDMYLCNKHPDSVTYTTLIDALGKTGRIEEATELTMKMLRQGLVPSPVTFRSVIHQY 708
LLD+M + PD++TY++L+ L + G+++EA + + R G+ P+ VTF S++
Sbjct: 474 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 533
Query: 709 CRKGRVEDLLNLLKKMHSK--SRFQTAYNFVIEKLCKFGFLEEANSLIGEV 758
C+ + + ++ L M ++ +T+Y +IE L G +EA L+ E+
Sbjct: 534 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038881915.1 | 0.0e+00 | 85.28 | pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida] >XP_03... | [more] |
KAG6581451.1 | 0.0e+00 | 84.33 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023543307.1 | 0.0e+00 | 84.45 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isofor... | [more] |
XP_022977402.1 | 0.0e+00 | 84.10 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isofor... | [more] |
XP_022146665.1 | 0.0e+00 | 84.14 | pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Q9FMF6 | 7.4e-73 | 29.85 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9LFF1 | 2.4e-71 | 27.40 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FIX3 | 2.4e-71 | 29.88 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q3EDF8 | 1.5e-70 | 30.15 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 7.6e-70 | 30.87 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IIC2 | 0.0e+00 | 84.10 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isofor... | [more] |
A0A6J1CXV8 | 0.0e+00 | 84.14 | pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... | [more] |
A0A6J1EJG8 | 0.0e+00 | 83.98 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like OS=Cuc... | [more] |
A0A5D3CSD4 | 0.0e+00 | 82.92 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3AYP8 | 0.0e+00 | 82.92 | pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT1G30290.1 | 5.8e-275 | 61.82 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G64320.1 | 5.2e-74 | 29.85 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 1.7e-72 | 27.40 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 1.7e-72 | 29.88 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G09900.1 | 1.1e-71 | 30.15 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |