Sed0024927 (gene) Chayote v1

Overview
NameSed0024927
Typegene
OrganismSechium edule (Chayote v1)
Descriptionribonuclease P protein subunit p25-like protein
LocationLG05: 1149900 .. 1160092 (+)
RNA-Seq ExpressionSed0024927
SyntenySed0024927
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGGTATCAGAAGGTCGAGAAACGCAAACCAGAATCCCCCATTAACGAAAACGAGATCCGAATCACCAGCCAAGGCGCCATTCGAAACTACATAACCTATGCCTCTTCACTGCTCCAGGTTCTCAATCTCCTTCATTGGATTTTGTAACTTCCATCTTCATTTCTTGTCCCAATGTTGTGTCTGTTCTATAAGCTTTTTCATTCAGGAAGTGTCTTTGTGTGCCAATCGATTTGGGTTGCCAGGGATTTTGTTTTTAGTTCTCGATGATTCGGTGTTTTGGGGTCTGCATGTGTAAGAACTTCTTTGATTTTCACTCGTAGTTGTTCATGTCTTGTTGGGCTGTTAGGGTTTTTTTAGGTCAATTAGTTTCAGTGGATGCTTATGCTGGTTTTTGAGGAAACAGATTTCTGAATGAAAAGGATCACACTCTAGTATTTACAACTACAAAATACTCCATTGAACTAGAGCTCTGCAGAGAAGTAACTAAAACATTAGTCCCCAAGCTCTACAAGTTCTCTTAAGAACTTTACATGGCTCCTCTGTTAGTTATCTATTTGTGTGTGTGTGTGCATGTTTTTTTTTTTTTTGTTATTGATGAGTGTCCACTATTTTGTAAGTTCCGGACTCGATGATCATATGGTTATCCTTTCACATACTCTCAATTATTTTTTGGTGTCATGGTTCCCAAGGGGTGGCACGATAGTTGTAGACTTGGACTTTGAGGATATGCTCCCCTCAAGGTCCCAGGTTCGAGACTCAGCTGTGACATTACTTATTTGATGTCTCCCGGTGCCTGGCCTAGGGACGGGCGTGGCTACCCTTATTTTAAAAAAATTATTATTTTTTGGTGTCATGGTGGTCCATCAATTTCATTATAATTATGAAATTATGAAAGGGGGGCTATAAGTCCATGTTACAAAAGAGATCTCCAGCTATTTATAAGAGTATTGATAACATGAAATAGAGGAGATAGTTTACACCAACATGAACCTGTTATGTGGAATTAATTTATCATGAACCGGGTGGTACATCTGTTTTACCACTGTTTATTACTCTATCAGTTCTTACCATCGATTTTTATTTATTGTTTATACATATGTTATTTTACCTTGATTGAGGTGAGGCCCAATTATCATCTGTTGTAGCGATAAATGAATTCTTGAGTATGTTATTGTTGTTGTTGTTGTGTGTGTATATATATATAAAATTTAATCATATTTTGGTTATGAAAAAAAATTGCCACATGTTCTTGGAACTTATTCAGGAAAAACGTGTTAGAGAGATCGTTTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCCATTGCAGAAATTTTAAAGGTTTATTTCCGTTAAAATATGTGTGCATTTGAGTGCAAATATTGTGTATTTCATAAATGATTAACCTTGTGTATTCCCAAAACAGAAGAGAATACCACGGTTGCATCAAGAAACAGCCATCAGCTCAGTTAGCATAACTGACGTATGGGAACCGATTGAAGAGGGTCTTGTACCGTACGTTTTCGAAATATATGGATTTGAAGTTTCTTATATAATAAAGATTTGATAACCTATTTTTGTTTTAGTTTATTTGCACTCACTCTATATGCTTTGCTCACAACTTTGAAGCTTAATACTTTAGACATTCAAGAAATAACTTCTAAAATTGTCACACAGGGTGGAGATGACTCGTCACGTCTCATTGATTTCACTTACTTTGTCCAATCAAGAGCTAAATACAAATTCTCCGGGGTAAGTTGTTTTGAAAACTTCACTTGTACATATTTTGCTGATTTTGCAATTTGCTATGAAATGTGTGTCTTTAGCTACTTTTCCTACATATTTCGTGCTGTTTCTTTCACATGTATGATGAAAATCATGAAATAACGCTTGTTCGTAGGTATCAAGCTCCACTCTTTGTGGAACAGCCAAAACAACAATATAACAATCAGCAGCAGCAACAACAACAACTACCCAGACAGCCTCGCATTTATCACATTGCTGTTAATGAAGGTGATTTCATGTTCGACATCTTACTATTGGATTACGGTACTCGATCATTTACGAGCTTTGACATATTTCTGGCGTTTTTGCAGATCCATATGGCCAAGGCAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGTAACTATCAAGGTGGATACGGGAACTATCAAGGTGGATACGGGAACTACCAAGGTGGATACGGAAACTACCAAGGCGGTTATGGCCACTACCAAGGCGGTTACCGCGACTACCAAGGCGGATCTGACAACTACCAAGGTGGAGCTGGATATTATCAAGGTGAATATGAAACTATCAGATATTTTAAATAGAAGCATAAGTGTTTATTGGATTGCATTAGAGTACAATATGTAACTTCCGTGAGTTTCATTCATCATAGATAATGAGAACTATCAAGGTGGAGGATACTCAAATTGGGGAAGAGGAGGTGGGCGTAGTAGAGGCTGGGCTTACCGCGGTAAGTTTCTTTCTCTAATTGGTCCACACGTCACCGAAATATAATCCAAGTCTGTCCTCGAGTTGACTGTAGAAATGTTTCGAAAATAAATGCAATGCGTTCGAGTTTAGTAACACAGGGTATTAATTTACTTTTCTTCAAAATCATAACTAGTTCTTAAGGTATATCATATCATGTATTTAGATATTTATACTTCTGATCATGTAATGTTTGCAACATGCTCTTGATGAGTTGTGGGAACAAAGCTATTCAAGCATTCATTTTCTTACTGCAGGAGCTGGATATGAAAGGGGCAGAGGAGAAGGGGGTAGAGGTTATGGCTGTGGACGGGGGCGAATGGGTGGTCGAACAAGGGGCGGCGGTGGAAACCAGGCTTAGTCGAAACATATTCGTTTGTTCTTGGCCGATGAGACGAATTATCACATATTTGTTTTGATAGCTTGAAATTCGGTTTTTTACAATTTCCAGCGTTTTTAGGCAGTGCTTTTTTTTTCCAGATAATGTGGGAATGCAGCATTGTGTATTTGTGGGGCAATGTTGTGTTTGGTTCATGTTTTTGCCTTTAGCTGAAGATCATTCAGTTTATTGTTATTAATGTAATTTGTTTTACACATGTCTTTTCTATAACCACTCTTAGTTTCAAGTAGTTAAAAAATATATTGCTTTCTATACAACAGATCATAGTTTTTAGATAGGTCATGAATTCAAATCCTTACATTTAACTACTCTTTTAAATTCAAGAGTATTTGAAGTCAAGTTTATAAACTTTCCTACTCATTATGTCAATTGAGTTTGTTGGGCTTAATTAAATTAAATATTTTTAAAAAATTGAGAAATGGAAGATTCTCTTAACTATACCTCAAACGAATTTCACAGGTAAGTCTTGAACTTAAAGAATAGTATATCTTCAAAAGTCCAAGTCTTCAATTACTGAAAAATTTGTTGGGCTTGATTCAAAACTTCGTGCTTTTATAAGAGATAAAAGTCCATGTTTAAAGACTAAAGTGCCCCCATGACACATTGAAATAACAACATAATCCAAGAATTAAACAACAAAACACAATATGTGGCCAAAGAAGAATCGTTCATTCAACTGAACACTTATCTTTCACTCTTGCTAGGACCAAAGTGGTCAAATTGAGAATAATATTATTGATGTGGGTGTGAAGAAAAATATGTGACAAAAAAGAAAGCATTTAAAAAAAAAAAAAAATAGTTCTTGTCTCTATCTGTTAACATGCCACTAGACAAGTGCCACGTCAACATAAAGTAAGAAAAATGGTGGAAAATGTGACACGTAAGCCAACCTAGTTTATTTAAGAGATTTATGAGAAGGAAAGGTTGTGACACATAAACATGGATCAAAATCCCAAACAATTTTTTTTTTGTTATTTTGTTCATAAATGCATTAATTTAAACGACCAAACAAAAACTTGTCGCCTTCTAAGTATTTGGTTGTCTATTGAAACATGAGTAACTTAAACTATTATATGATAGCGATGTAATATTATCCAATCTACATTCCAATTCAATGGACCACATTAACTTTTTAGTAAAAAGTTCATTTACCAACTTAGCAAAAAGTTAGGTTATTATTATTTCTCAGTTCAATAATAATATTTTGTTGTTGGAGATTTCGAATTTGTGACATATTGCAAGTCTAAAGTTAATATTATTGTACCGAATAGGTCGTGGTGCAATTAGTTATCTAGTTTGGTGTAAATCCATTTTCACTCCACGATCACCGATTCGATCCCTGAAATCAGTATTTGCAATCTTCTTCTCTCAATTTGTACTTAAAAAAAGAAATTAATATTACCGTTACCAATTCAATGAAAGTTTAGCTTCAATAAGTAGTGGCTAGCATGGTAGAACCTAGTTATTAAATTGTTTTTTTAACCTTCTGAATTAAAATATATATATATATATATATATATATATATATATATATATATATATTTATTGTACGATGATCCAATTATGTAGGAGAAAAAGTTTCTTAAGAAATGTATAATTTATTTGGAAAATAAGTAGAATATGATGAACGAATTAAAAAACTGTCTAAAATCCAAACTTTGACTTCCCCAACTCAGATCCATGCCATTTGTTTTTCAAAATTCAAATGGGGAATAACTATAAATCTTACTTAAATATAGTACTACAACTTAATAAAATTTAATTAAATATAAATTTTCAGAATTGAACTCGATCATAAAATTTCATAAAATCGAATTAAATTATAATTACGCCCAACACATCAACAACCCTGGCATAATTTGTTGAAACCAATAAAATAAAATAAAGACCACATGTGAAAATAAAGACCATTTCTCCCGCGAAATTCAGCTTCTGTCCCACACATGATTTTTTTTTTGTCCCACCACATGATTTTCAAAATTTATAATTAACCCCAACTCGCATTAAAAATTTCACCGACATATTTTCAAATAATTAGATGGACGAACCTTTTTTTTTAACAGCACGAACCATATTTATTATATAAAAGAATAACAAGTAAATAAATCATCATAGCAAAAATTCAATATAATTTGCATATATAACCTAACAAATAGGTGGTTGTTAATCCTAATATAGTTCAACTAGTTGAAATATAAGGTTTTTCGACTATGTCGAGTGGATCAGTGGTGCAATAATTTCAGTGGTGCAATAATTTCATTGTTCGATTGTAAACCAGTTCAACACCAACGTCACAAATTCAATCATGAGATCGGTATTTGTCCTTTCTCCCCCGATATATACTCAAAAAAGGTTTTTCGACTATGAAAATACAACATGCATGTTCTAGTTTTAGTAATTAAAGAGTCTTTTGAATCAAATTGTGAATATATCTTGTTGGATGATGTAATTAAGACCTCGTTTGATAACCATTTTATTTTTGTTTTTTGTTTATGAAATTTAAACCTATTTCTATTCAAATTTCCTGACATGTGCTCCATCTTTCCTACAATGTATCCATCTTTCCTTAATAAAGTAGGAGAATACTAACCAAATTTCAAAAACATAAACAAGTTTTTAGAAGCTACTTTTTTTGTTTACAAATTTTGGTTTTGTTTATTAAAATATAGGTAAGATGTAGATATCCAAATAAGAAAAAATGTATAGTAAGATAATTGTTGTAGACTTAAATTTCATAAACAAAAAACGAAAAACAAAATGGTTATCAAACGGGGCCTAAATTTACCACAACCTATTAGGTTAAGCGTTTGAGTTGATTGATGGTTTAACACAATTCTGCTATCAAAGTAGGAGGTATTGAGTTCGAATTCATGCCAAGTTGTTTCCTCCCTAATTAAAATTAAATTCAATTTATAAGGCATTTATCAAATTTCAAAGTCTACAATTAAGGAGGAGTGTCTGCAAATATAATTAAATTTACTTCAATCCATCACCTTAAGTTTTGAGTTGATCGATAGTTTAACATAATTCAAAATATTTGTAACTTCATTTCTTTGATGCTTTCCCGTGCTTCATCTAAATATGGACATGATTATCCTAATGGAGTGAAGCTACCATTTTTTAATGAAAAAAAAACCATTTTTTTTCATAAACTGAAACTATTATATTGTCTTCTTTTTTTTTTTAACTTTATTTTATTTTTGAGTACAAAAAAAAAAAGAAAAAAAAGAAACTTTATTATAACCCATTATGGACCAAACAAAGCAAACATTCCTATGTTCATGTAAAACATATGTTTTTGGGAAACAACTTCTAGGACATTCTCCTTCCAGTTCCAACAATAAATTAGAGGCCAATCAACAACCCATTTCCCAAACTCTCTCCAATGCAAGTTTATACTTCCAACTACCATGAAAAGGCTCAATTTATAACCCATAGGCCAATATCATTTGGCACCAATCCAAATCAACGATCCATATTCATCCAAGTGTATGGCAACCACAAGTGCCACGTGGACCAAATTAAGCTTTTTGATTAACTTCAAAATTGTCCAAATCAACAAAAACCTACCACGTGAAAAAAATATATTCTATAAGATTGCCTTTCTCTTAATAATCAAGGAGAGAAAGTTACATTGGGGCAATCTAAATAATGGATGAGCATGTTCCTTTGGGGCGTTTCTTTAAAGTCTTAGGTTCAAGGTGATTGTGAGAATTAATTTCTCAAACGATCCCCTATTTTCACTTTCGGTCTTATGATATATCTCAATACCATACTTTAAGCACGAGTCAGTGGTGCCCCTGAATTTAGAGGAGAAAAACTCTAAGTTTATGGGTCATAAAAAGAAAAAATTTGAACATGAATTTGGAAATCAACATACCTCTACTAAAAGTTGTAAAAAATTATTTCAATCACAAAGAATAAAACATTCTACTCAAAGCATAAACTACTCACACCCTGCCTCACTCTCCACAAGTCCCACTCTCAAAAGGAATTTAATTAGAGTCGTGTTTGGAGCACACTACCTGTTGAACAAATAAAGTTGTCATACATCACTAAGATAAGAGAAAGATCTTGTATATATAAAGAGAGGATAATACCTCCATCGATATGAGACTTTTTGGGAAATGCCAAAAAACAAAGCCATGAGGGATGATTCTCAAAATGGATAATATCATATCAATGTGAATGTTTATTGTCCCTAACACTATTTTGCATCTTTTCGACATGAGATAAACTTCTAATATTTTGCTAAAAAACCAAGAACTAAATACAAATTCAAAGTACTTTTATAATTTCACATTCAACAGTACAAAAGTTGTCACTATAAAATTCTTAGTACATTATGTTATCTCTTAATAATCGTTGGATATAGATTCGACAACATGCACGTTCTCTGATAACCACTACTTACAAATTTGAAGTATTCTTACCATTTTTGAACGTCGTAAAATTGTCAGTCACATTCGCTCTTGAAATCTCTTAACCACAGGGTAATAATCTTTTCTTTTGGCATGTAATAGTCCTTTGCCTTGTTTATAAATGACTCACATCACATTCCACCTTTCTTGTACTCATTGCTTGGTTGTCTTCAGCATCTTCCTTAGATTCTCATTCCAAAAATTTCTCTCTGTTTTCATTTTCCCCCTCAGCTTTTCACAGTGAAGACAGGGAATCTTCAGCAAAGGGACAGCACAGACAGATCTCTCTAAGTGCTATCCATTTTGACCCAAAGTTTGTCATTTTTCTTTGACATGTGCAAAACCCATTTTAAAAGAAGCTTATTCTACCAATAATAGCCATGCAGGTAGGACTTTCAAACAGGTTTTGTTTGTAAAAGTTTCTAAAAAAAAGGGTTTTCTCTCTGTTTTTTTCTGTTAAAGATTAATGGGGTTTTGTTGTTTTTGATGATCTGCAGCAAGTTCTTCAATGGGTTTTCAAGGAAAGTAATGAAAAAGATGGGCAGAGGACTTCAGATTTCACCAAGAAGAAGGGAACAAGTTGTGGTAAGATGAAATTGCTCAGTAGTCAGTACCTGTTTGATAAAATGTCCAAGTGGTAATGATTTGTTTGAAATGTCACGAGTGTTTGAGTTCAACAATAATTGAGACCAGAAGATTTGAACTCACGACCTTTTTGTTGGGGCACACACTTATGTTGTTGAGCTATTATTATTGTTGACATGTGTCATGTGTGTGTGGGTTTTTTTTTTTAATTCAACAACGTTTGGGGATGGATTGTTTTGAGTATATAACCTATCAGTTACTAGGTCGTAAACAATGAAACTAGAGCACTCTTCTTTTGGCAAGTGTTATAAGTGTTGGACTCAGAGACTTATGTACTTTTCATCTTTTTTGTTTGATAAAGGAATGGGTAGTTGTAGGGTTAGACGATATGTTCTGTGAATAGTCAAAATGCGTATAAATTGCTCCAGACACTCACAAATGAGTTGGGGGATTCAAACTCAATACTTCTTTGTCATGGACGTCTTATTTTTGCTGAGCTATTGCTCTTGTTAGCGAATGTCACGAGTGTTTGAAATTTATGTGTTTTTTTCCTCTTTTTTGTCTGATAAAGGAACTGCTAAATCAAAGGAGATAGTGGTGTCTAGTCCTTGTGGGGCTTCTCAAAGATCAAAGGGATTTGAAGGTAGAAAGTTTGATATTAAGAAGTTGAAGTCATTTGCTTTGTTATGCAGAAAGGATATTGCTAAATCTTGCTTCTATAATACCATTAATATTAAGAGACCAAGAGCTCAAGGCTTTGAAAATATGCAACAATATTGGAACCAAAAGATGAAAAAAGAAGATTTTGCCAAGAGAATCAGAGAGGTTGGTCCAAAAGCAGATTCTTCTTCTGTTCATGCTGGCATCAAAGTTTTGCCAATAACTGATGCCACTATGGTAGAACAATGCAGCAATAAGCATGAAAAAAAAGTTGTGTCCAATGGGGAGAGTAAAACCAAATCTAAATCAAGAGTAAAGGAGCTTTTGAGATGGGCTGTGGCTTCAAAATCAGAAAAAGGAGGGAAGTTCATCACTGGCAAGGTTATTTTCTTGTGTTGAATCTTTAGAAATCAACAATATTTCAGTCACTATCAATTTGTTTGAATAGTTTACTTCTCGAATTATCGCGAAACTGGATAGCTTAAACTTATACGTTACGGTACATGTGACCTTGATGCTCTAGTGAAGTGTGGGCTCGGAGATTGATTTGACTCGCAAAACCCGTAACGTGAACTATATTAACATTAATGGAGAGAAAATGACATGATAAGGACTTGACCCCTATTGTCGGCACCTCGTTGGTTGAGGCTTGGGACCTCCTAGGTATGCTCTCATGGAGGTTTTAGGTTCAAAACCCACAAGTTGAGCTTAATTGTAAAATCCCTTGTTGTTTCTTGGGTCTGGGCCTTGGAATGGTTGCGGGTGCTCCCGAGTATAGTGGGACGAAACTCCAATTTCCGGTTTTCAAAAAATAAATTTCAGCCCTAGGACCTCATAATCTGATAATATGTTAAATTACCCCTAAATCCAAAAAACTTACGCCCCTAAGTTTAAATATATTTTGTTCTTGTTTATATATTTTCTTAGGTTACCAAATTGATATTGAATGGTGACTCGGTCTTGTATCCATGCTGAACATTAAAGAAGCTAATGATTCTAACTAATTGATAGTGACTGAAATTTGTTGTTGAAGAGTTTTCCAACATCACAATTTTTTGCTTTATGATGTTTTAAAAAGTCTTTTCACAGTCAATAAATTAAGAAGCATTTGAAAGACATACAATGCTCAAGTTTCAATGATGCAATAGTGAAGGGAAACTCAAAGATTTCCATACTGAATAGCTTAAACTGATGCAAATTCTTGCAGGTTTCACGAACACGAAACCAAGGAACTCTAAAAGCAGGTCGGGACGATGATCAAGCGAGAGGTGACTCTCCCAAGATCAGTTTTAGATGGGAAGCTGAAAGCTGCTCCTCCATTTCATCAGCCTACTCGTCGGTGTCGGCGGCGACGTCCTTTAAGAACTGTTCCATTACTCTGAATTCCACTGCCATTAAAGAAATCAATCAATATTATCCAAGAAATGGAAGCTGGATCACTACAGATTCTGAATGTAAGGCTCAAACTCCCATTCCACAAACTGACATGAAAATTATTATGAAACAAAAACATGAAGAATTTACTGAATTTCCCTCTCTGCCTTAAAATGAACAGTTGTTGTGCTAGAGCTGTGAAAGAGAAGGAAGACAGATGATCTGCC

mRNA sequence

ATGGATAGGTATCAGAAGGTCGAGAAACGCAAACCAGAATCCCCCATTAACGAAAACGAGATCCGAATCACCAGCCAAGGCGCCATTCGAAACTACATAACCTATGCCTCTTCACTGCTCCAGGAAAAACGTGTTAGAGAGATCGTTTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCCATTGCAGAAATTTTAAAGAAGAGAATACCACGGTTGCATCAAGAAACAGCCATCAGCTCAGTTAGCATAACTGACGTATGGGAACCGATTGAAGAGGGTCTTGTACCGTATCAAGCTCCACTCTTTGTGGAACAGCCAAAACAACAATATAACAATCAGCAGCAGCAACAACAACAACTACCCAGACAGCCTCGCATTTATCACATTGCTGTTAATGAAGGTGATTTCATGTTCGACATCTTACTATTGGATTACGGTACTCGATCATTTACGAGCTTTGACATATTTCTGGCGTTTTTGCAGATCCATATGGCCAAGGCAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGTAACTATCAAGGTGGATACGGGAACTATCAAGGTGGATACGGGAACTACCAAGGTGGATACGGAAACTACCAAGGCGGTTATGGCCACTACCAAGGCGGTTACCGCGACTACCAAGGCGGATCTGACAACTACCAAGGTGGAGCTGGATATTATCAAGATAATGAGAACTATCAAGGTGGAGGATACTCAAATTGGGGAAGAGGAGGTGGGCGTAGTAGAGGCTGGGCTTACCGCGGTAACTATTCAAGCATTCATTTTCTTACTGCAGGAGCTGGATATGAAAGGGGCAGAGGAGAAGGGGGTAGAGGTTATGGCTGTGGACGGGGGCGAATGGGTGGTCGAACAAGGGGCGGCGGTGGAAACCAGGCTTAGTCGAAACATATTCCAAGTTCTTCAATGGGTTTTCAAGGAAAGTAATGAAAAAGATGGGCAGAGGACTTCAGATTTCACCAAGAAGAAGGGAACAAGTTGTGGAACTGCTAAATCAAAGGAGATAGTGGTGTCTAGTCCTTGTGGGGCTTCTCAAAGATCAAAGGGATTTGAAGGTAGAAAGTTTGATATTAAGAAGTTGAAGTCATTTGCTTTGTTATGCAGAAAGGATATTGCTAAATCTTGCTTCTATAATACCATTAATATTAAGAGACCAAGAGCTCAAGGCTTTGAAAATATGCAACAATATTGGAACCAAAAGATGAAAAAAGAAGATTTTGCCAAGAGAATCAGAGAGGTTGGTCCAAAAGCAGATTCTTCTTCTGTTCATGCTGGCATCAAAGTTTTGCCAATAACTGATGCCACTATGGTAGAACAATGCAGCAATAAGCATGAAAAAAAAGTTGTGTCCAATGGGGAGAGTAAAACCAAATCTAAATCAAGAGTAAAGGAGCTTTTGAGATGGGCTGTGGCTTCAAAATCAGAAAAAGGAGGGAAGTTCATCACTGGCAAGGTTTCACGAACACGAAACCAAGGAACTCTAAAAGCAGGTCGGGACGATGATCAAGCGAGAGGTGACTCTCCCAAGATCAGTTTTAGATGGGAAGCTGAAAGCTGCTCCTCCATTTCATCAGCCTACTCGTCGGTGTCGGCGGCGACGTCCTTTAAGAACTGTTCCATTACTCTGAATTCCACTGCCATTAAAGAAATCAATCAATATTATCCAAGAAATGGAAGCTGGATCACTACAGATTCTGAATTTGTTGTGCTAGAGCTGTGAAAGAGAAGGAAGACAGATGATCTGCC

Coding sequence (CDS)

ATGGATAGGTATCAGAAGGTCGAGAAACGCAAACCAGAATCCCCCATTAACGAAAACGAGATCCGAATCACCAGCCAAGGCGCCATTCGAAACTACATAACCTATGCCTCTTCACTGCTCCAGGAAAAACGTGTTAGAGAGATCGTTTTAAAAGCAATGGGACAGGCAATCAGTAAAGCAGTGGCCATTGCAGAAATTTTAAAGAAGAGAATACCACGGTTGCATCAAGAAACAGCCATCAGCTCAGTTAGCATAACTGACGTATGGGAACCGATTGAAGAGGGTCTTGTACCGTATCAAGCTCCACTCTTTGTGGAACAGCCAAAACAACAATATAACAATCAGCAGCAGCAACAACAACAACTACCCAGACAGCCTCGCATTTATCACATTGCTGTTAATGAAGGTGATTTCATGTTCGACATCTTACTATTGGATTACGGTACTCGATCATTTACGAGCTTTGACATATTTCTGGCGTTTTTGCAGATCCATATGGCCAAGGCAGAGGGCGTGGTAGAGGGAGAGGGCGTGGTTGGGGAAGAGGTGGATATGGTAACTATCAAGGTGGATACGGGAACTATCAAGGTGGATACGGGAACTACCAAGGTGGATACGGAAACTACCAAGGCGGTTATGGCCACTACCAAGGCGGTTACCGCGACTACCAAGGCGGATCTGACAACTACCAAGGTGGAGCTGGATATTATCAAGATAATGAGAACTATCAAGGTGGAGGATACTCAAATTGGGGAAGAGGAGGTGGGCGTAGTAGAGGCTGGGCTTACCGCGGTAACTATTCAAGCATTCATTTTCTTACTGCAGGAGCTGGATATGAAAGGGGCAGAGGAGAAGGGGGTAGAGGTTATGGCTGTGGACGGGGGCGAATGGGTGGTCGAACAAGGGGCGGCGGTGGAAACCAGGCTTAGTCGAAACATATTCCAAGTTCTTCAATGGGTTTTCAAGGAAAGTAATGAAAAAGATGGGCAGAGGACTTCAGATTTCACCAAGAAGAAGGGAACAAGTTGTGGAACTGCTAAATCAAAGGAGATAGTGGTGTCTAGTCCTTGTGGGGCTTCTCAAAGATCAAAGGGATTTGAAGGTAGAAAGTTTGATATTAAGAAGTTGAAGTCATTTGCTTTGTTATGCAGAAAGGATATTGCTAAATCTTGCTTCTATAATACCATTAATATTAAGAGACCAAGAGCTCAAGGCTTTGAAAATATGCAACAATATTGGAACCAAAAGATGAAAAAAGAAGATTTTGCCAAGAGAATCAGAGAGGTTGGTCCAAAAGCAGATTCTTCTTCTGTTCATGCTGGCATCAAAGTTTTGCCAATAACTGATGCCACTATGGTAGAACAATGCAGCAATAAGCATGAAAAAAAAGTTGTGTCCAATGGGGAGAGTAAAACCAAATCTAAATCAAGAGTAAAGGAGCTTTTGAGATGGGCTGTGGCTTCAAAATCAGAAAAAGGAGGGAAGTTCATCACTGGCAAGGTTTCACGAACACGAAACCAAGGAACTCTAAAAGCAGGTCGGGACGATGATCAAGCGAGAGGTGACTCTCCCAAGATCAGTTTTAGATGGGAAGCTGAAAGCTGCTCCTCCATTTCATCAGCCTACTCGTCGGTGTCGGCGGCGACGTCCTTTAAGAACTGTTCCATTACTCTGAATTCCACTGCCATTAAAGAAATCAATCAATATTATCCAAGAAATGGAAGCTGGATCACTACAGATTCTGAATTTGTTGTGCTAGAGCTGTGA

Protein sequence

MDRYQKVEKRKPESPINENEIRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKAVAIAEILKKRIPRLHQETAISSVSITDVWEPIEEGLVPYQAPLFVEQPKQQYNNQQQQQQQLPRQPRIYHIAVNEGDFMFDILLLDYGTRSFTSFDIFLAFLQIHMAKAEGVVEGEGVVGEEVDMVTIKVDTGTIKVDTGTTKVDTETTKAVMATTKAVTATTKADLTTTKVELDIIKIMRTIKVEDTQIGEEEVGVVEAGLTAVTIQAFIFLLQELDMKGAEEKGVEVMAVDGGEWVVEQGAAVETRLSRNIFQVLQWVFKESNEKDGQRTSDFTKKKGTSCGTAKSKEIVVSSPCGASQRSKGFEGRKFDIKKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPKADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEKGGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATSFKNCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL
Homology
[Close]
BLAST of Sed0024927 vs. NCBI nr
Match: KAG7011317.1 (Ribonuclease P protein subunit p25-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507.3 bits (1305), Expect = 1.8e-139
Identity = 329/518 (63.51%), Postives = 361/518 (69.69%), Query Frame = 0 

Query: 1   MDRYQKVEKRKPESPINENEIRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKA 60
           MDRYQKVEK KPE PI+ENEIRIT+QGAIRNYITYAS+LLQEKRVR+IVLKAMGQAISKA
Sbjct: 1   MDRYQKVEKPKPELPISENEIRITTQGAIRNYITYASTLLQEKRVRDIVLKAMGQAISKA 60

Query: 61  VAIAEILKKRIPRLHQETAISSVSITDVWEPIEEGLVPYQAPLFVEQPKQQYNNQQQQQQ 120
           VAIAEILKKRI RLHQETAISSVSITDVWEPIEEGLVP            Q NN      
Sbjct: 61  VAIAEILKKRISRLHQETAISSVSITDVWEPIEEGLVP------------QSNNITTSSS 120

Query: 121 QLPRQPRIYHIAVNEGDFMFDILLLDYGTRSFTSFDIFLAFLQIHMAKAEGVVEGEGVVG 180
               +P  +H      + +F  +LL                ++IHMAKAEGVVEGEGVVG
Sbjct: 121 SSSSRPNNHH----PDNLVFITMLL----------------MKIHMAKAEGVVEGEGVVG 180

Query: 181 EEVDMVTIKVDTGTIKVDTGTTKVDTETTKAVMATTKAVTATTKADLTTTKVELDIIKIM 240
           EEVDM       GTIKVDT TTKVD       MATTK  TATTK  LTTTKV L IIKIM
Sbjct: 181 EEVDM-------GTIKVDTATTKVD-------MATTKVATATTKVVLTTTKVVLAIIKIM 240

Query: 241 RTIKVEDTQIGEEEVGVVEAGLTAVTIQAFIFLLQELDMKGAEEKGVEVMAVDGGEWVVE 300
                 DT+IG+EEVG VEAG T            ELD K AEE+ VEV+AVDGGEWVV 
Sbjct: 241 -----VDTRIGDEEVGGVEAGPTV-----------ELDTKEAEEE-VEVIAVDGGEWVVA 300

Query: 301 Q-GAAVETRL---------------SRNIFQVLQWVFKESNEKDGQRTSDFTKKKGTSC- 360
           Q GAA ETRL                    QVLQWVFKE+NEKD       TKKK TSC 
Sbjct: 301 QGGAAGETRLRPLDKCHVNMKSGKWRTKCHQVLQWVFKETNEKDS------TKKKETSCD 360

Query: 361 -GTAKSKEIV--VSSPCGASQRSKGFEGRKFDIKKLKSFALLCRKDIAKSCFYNTINIKR 420
            G+++SKEIV  VS+ CG SQ SKGFEGR+FD+K+LKSFALLCRKDIAKSCFY+TINIKR
Sbjct: 361 KGSSRSKEIVVSVSNHCGGSQGSKGFEGRRFDLKRLKSFALLCRKDIAKSCFYSTINIKR 420

Query: 421 PRAQ--GFENMQQYWNQKMKKEDFAKRIREVGPKADSSSVHAGIKVLPITDATMVEQCSN 480
           PR    G +NM QYW  KMKKED       +G K DS SVHAG KVLPITDAT+VEQC +
Sbjct: 421 PRTTQGGLDNMHQYWIHKMKKED-------IGQKVDSCSVHAGTKVLPITDATLVEQCGS 442

Query: 481 KHEKKVVSNGESKTKSKSRVKELLRWAVASKSEKGGKF 497
           K  KKVV+NGESKTK+KSRVKELLRWA+AS+SEKGGKF
Sbjct: 481 KGVKKVVANGESKTKAKSRVKELLRWAMASRSEKGGKF 442

[Close]
BLAST of Sed0024927 vs. NCBI nr
Match: XP_038888003.1 (uncharacterized protein LOC120077942 [Benincasa hispida])

HSP 1 Score: 434.1 bits (1115), Expect = 1.9e-117
Identity = 227/276 (82.25%), Postives = 249/276 (90.22%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGTSC--GTAKSKEIVVSSPCGASQRSKGFEGRKFD 374
           QVLQWVFKE+NEK GQRTS  T KKGTS   GTA+S+EIVVSSPCG SQRSKGFEGRKFD
Sbjct: 3   QVLQWVFKETNEKQGQRTSHST-KKGTSWGEGTARSEEIVVSSPCGNSQRSKGFEGRKFD 62

Query: 375 IKKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPK 434
           +KKLKSFALLCRKDIAKSCFY+TINIKRPR QGF+NM QYW QKMKKE+ A+ IRE+   
Sbjct: 63  LKKLKSFALLCRKDIAKSCFYSTINIKRPRTQGFDNMHQYWIQKMKKEEIARGIREISQN 122

Query: 435 ADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEK 494
           ADSSSVHAG KVLPITDAT+VEQCS+K EKKV++NGESKTK+KSR+KELLRWA+AS+SEK
Sbjct: 123 ADSSSVHAGTKVLPITDATLVEQCSSKTEKKVLANGESKTKAKSRMKELLRWAMASRSEK 182

Query: 495 GGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATSFK 554
           GGKFITGKVSR RN+GTLKAG DDD+   DSPKISFRWEAESCSSISSAYS+VSA + FK
Sbjct: 183 GGKFITGKVSRQRNRGTLKAGLDDDRGSNDSPKISFRWEAESCSSISSAYSTVSAVSPFK 242

Query: 555 NCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           NCSI LNSTAI+EINQYYPR GSWITTDSEFVVLEL
Sbjct: 243 NCSIALNSTAIQEINQYYPRRGSWITTDSEFVVLEL 277

[Close]
BLAST of Sed0024927 vs. NCBI nr
Match: XP_004152019.2 (uncharacterized protein LOC101208427 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 1.2e-111
Identity = 219/276 (79.35%), Postives = 243/276 (88.04%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGTSC--GTAKSKEIVVSSPCGASQRSKGFEGRKFD 374
           QVLQWVFKE+NEK  +RT   + KK TSC  GTA++KEIVVSS CG SQRSKGFEGRKFD
Sbjct: 19  QVLQWVFKETNEKQRERTQ--STKKRTSCDKGTARTKEIVVSSSCGNSQRSKGFEGRKFD 78

Query: 375 IKKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPK 434
           +KKLKSFALLCRKDI+KSCFY+TINIKRPR QGF+NMQQYW QKMKKED  + I E+G K
Sbjct: 79  LKKLKSFALLCRKDISKSCFYSTINIKRPRTQGFDNMQQYWIQKMKKEDVTRGIIEIGQK 138

Query: 435 ADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEK 494
           AD  SVHAG KVLPITDAT+ EQCSNK EKKV++NGE+KTK+KSR+KELLRWA+AS+SEK
Sbjct: 139 AD--SVHAGTKVLPITDATLAEQCSNKSEKKVLANGENKTKAKSRMKELLRWAMASRSEK 198

Query: 495 GGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATSFK 554
           GGKFITGKVS+ RN+ TLKAG +DDQ   DSPKISFRWEAESCSSISSAYSS+SA + FK
Sbjct: 199 GGKFITGKVSQLRNRATLKAGLNDDQESNDSPKISFRWEAESCSSISSAYSSMSAVSPFK 258

Query: 555 NCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           NCSITLNSTAI EINQYYPR GSWITTDSEFVVLEL
Sbjct: 259 NCSITLNSTAIHEINQYYPRRGSWITTDSEFVVLEL 290

[Close]
BLAST of Sed0024927 vs. NCBI nr
Match: KGN58340.1 (hypothetical protein Csa_017426 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 1.2e-111
Identity = 219/276 (79.35%), Postives = 243/276 (88.04%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGTSC--GTAKSKEIVVSSPCGASQRSKGFEGRKFD 374
           QVLQWVFKE+NEK  +RT   + KK TSC  GTA++KEIVVSS CG SQRSKGFEGRKFD
Sbjct: 77  QVLQWVFKETNEKQRERTQ--STKKRTSCDKGTARTKEIVVSSSCGNSQRSKGFEGRKFD 136

Query: 375 IKKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPK 434
           +KKLKSFALLCRKDI+KSCFY+TINIKRPR QGF+NMQQYW QKMKKED  + I E+G K
Sbjct: 137 LKKLKSFALLCRKDISKSCFYSTINIKRPRTQGFDNMQQYWIQKMKKEDVTRGIIEIGQK 196

Query: 435 ADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEK 494
           AD  SVHAG KVLPITDAT+ EQCSNK EKKV++NGE+KTK+KSR+KELLRWA+AS+SEK
Sbjct: 197 AD--SVHAGTKVLPITDATLAEQCSNKSEKKVLANGENKTKAKSRMKELLRWAMASRSEK 256

Query: 495 GGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATSFK 554
           GGKFITGKVS+ RN+ TLKAG +DDQ   DSPKISFRWEAESCSSISSAYSS+SA + FK
Sbjct: 257 GGKFITGKVSQLRNRATLKAGLNDDQESNDSPKISFRWEAESCSSISSAYSSMSAVSPFK 316

Query: 555 NCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           NCSITLNSTAI EINQYYPR GSWITTDSEFVVLEL
Sbjct: 317 NCSITLNSTAIHEINQYYPRRGSWITTDSEFVVLEL 348

[Close]
BLAST of Sed0024927 vs. NCBI nr
Match: KAA0066288.1 (uncharacterized protein E6C27_scaffold21G003380 [Cucumis melo var. makuwa])

HSP 1 Score: 412.9 bits (1060), Expect = 4.6e-111
Identity = 219/277 (79.06%), Postives = 244/277 (88.09%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGTSC--GTAKSKEIVVSSPCGASQRSKGFEGRKFD 374
           QVLQWVFKE+NEK  +RT   + KKGTSC  GT ++KEIVVSSPCG SQ SKGFEGRKFD
Sbjct: 77  QVLQWVFKETNEKQRERTQ--STKKGTSCDKGTGRTKEIVVSSPCGNSQGSKGFEGRKFD 136

Query: 375 IKKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPK 434
           +KKLK++ALLCRKDIAKSCFY+TINIKRPR QGF+NMQQYW QKMKKED A+ I E+G K
Sbjct: 137 LKKLKTYALLCRKDIAKSCFYSTINIKRPRTQGFDNMQQYWIQKMKKEDIARGIIEIGQK 196

Query: 435 ADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEK 494
           AD  SVHAG KVLPITDAT+ EQCSNK EKKV++NGE+KTK+KSR+KELLRWA+AS+SEK
Sbjct: 197 AD--SVHAGTKVLPITDATLAEQCSNKSEKKVLANGENKTKAKSRMKELLRWAMASRSEK 256

Query: 495 GGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATS-F 554
           GGKFITGKVSR RN+ TLKAG DDD+   DSPKISFRWEAESCSSISSAYSS+SA ++ F
Sbjct: 257 GGKFITGKVSRLRNRATLKAGLDDDEESNDSPKISFRWEAESCSSISSAYSSMSAVSAPF 316

Query: 555 KNCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           KNCSITLNSTAI EINQ YPR GSWITTDSEFVVLEL
Sbjct: 317 KNCSITLNSTAINEINQCYPRRGSWITTDSEFVVLEL 349

[Close]
BLAST of Sed0024927 vs. ExPASy Swiss-Prot
Match: Q91WE3 (Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.7e-07
Identity = 29/82 (35.37%), Postives = 46/82 (56.10%), Query Frame = 0 

Query: 21  IRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKAVAIAEILKKRIPRLHQETAI 80
           +R+     IRN + +A++ + +   R IV    G+A +K V  AEILK+R+  LHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 81  SSVSITDVWEPIEEGLVPYQAP 103
              S+ +VW+ +  G  P Q P
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTP 119

[Close]
BLAST of Sed0024927 vs. ExPASy Swiss-Prot
Match: Q5PPN2 (Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.7e-07
Identity = 29/82 (35.37%), Postives = 46/82 (56.10%), Query Frame = 0 

Query: 21  IRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKAVAIAEILKKRIPRLHQETAI 80
           +R+     IRN + +A++ + +   R IV    G+A +K V  AEILK+R+  LHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 81  SSVSITDVWEPIEEGLVPYQAP 103
              S+ +VW+ +  G  P Q P
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTP 119

[Close]
BLAST of Sed0024927 vs. ExPASy Swiss-Prot
Match: Q8N5L8 (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25L PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.2e-06
Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 0 

Query: 12  PESPINENEIRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKAVAIAEILKKRI 71
           P+ P +  E+R+     IRN +  A   L+    R +V    G+A  KAV+ AEI+K+R+
Sbjct: 19  PQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRV 78

Query: 72  PRLHQETAISSVSITDVWEPI--EEGLVP 99
           P LHQ T +  +   D W P   + GL P
Sbjct: 79  PGLHQLTKLRFLQTEDSWVPASPDTGLDP 107

[Close]
BLAST of Sed0024927 vs. ExPASy Swiss-Prot
Match: Q99JH1 (Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp25l PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.2e-06
Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 0 

Query: 12  PESPINENEIRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKAVAIAEILKKRI 71
           P+ P +  E+R+     IRN +  A   L+    R +V    G+A  KAV+ AEI+K+R+
Sbjct: 19  PQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGSGRAAGKAVSCAEIVKRRV 78

Query: 72  PRLHQETAISSVSITDVWEPI--EEGLVP 99
           P LHQ T +  +   D W P   + GL P
Sbjct: 79  PGLHQLTKLRFLQTEDSWVPTSPDTGLDP 107

[Close]
BLAST of Sed0024927 vs. ExPASy Swiss-Prot
Match: Q9BUL9 (Ribonuclease P protein subunit p25 OS=Homo sapiens OX=9606 GN=RPP25 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.1e-06
Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0 

Query: 21  IRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKAVAIAEILKKRIPRLHQETAI 80
           +R+     IRN + +A++ + +   R IV    G+A +K V  AEILK+R+  LHQ T +
Sbjct: 38  MRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 81  SSVSITDVWEPIEEGLVPYQAP 103
              S+ +VW+ +  G    Q P
Sbjct: 98  RYRSVREVWQSLPPGPTQGQTP 119

[Close]
BLAST of Sed0024927 vs. ExPASy TrEMBL
Match: A0A0A0L8R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G624080 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 5.8e-112
Identity = 219/276 (79.35%), Postives = 243/276 (88.04%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGTSC--GTAKSKEIVVSSPCGASQRSKGFEGRKFD 374
           QVLQWVFKE+NEK  +RT   + KK TSC  GTA++KEIVVSS CG SQRSKGFEGRKFD
Sbjct: 77  QVLQWVFKETNEKQRERTQ--STKKRTSCDKGTARTKEIVVSSSCGNSQRSKGFEGRKFD 136

Query: 375 IKKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPK 434
           +KKLKSFALLCRKDI+KSCFY+TINIKRPR QGF+NMQQYW QKMKKED  + I E+G K
Sbjct: 137 LKKLKSFALLCRKDISKSCFYSTINIKRPRTQGFDNMQQYWIQKMKKEDVTRGIIEIGQK 196

Query: 435 ADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEK 494
           AD  SVHAG KVLPITDAT+ EQCSNK EKKV++NGE+KTK+KSR+KELLRWA+AS+SEK
Sbjct: 197 AD--SVHAGTKVLPITDATLAEQCSNKSEKKVLANGENKTKAKSRMKELLRWAMASRSEK 256

Query: 495 GGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATSFK 554
           GGKFITGKVS+ RN+ TLKAG +DDQ   DSPKISFRWEAESCSSISSAYSS+SA + FK
Sbjct: 257 GGKFITGKVSQLRNRATLKAGLNDDQESNDSPKISFRWEAESCSSISSAYSSMSAVSPFK 316

Query: 555 NCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           NCSITLNSTAI EINQYYPR GSWITTDSEFVVLEL
Sbjct: 317 NCSITLNSTAIHEINQYYPRRGSWITTDSEFVVLEL 348

[Close]
BLAST of Sed0024927 vs. ExPASy TrEMBL
Match: A0A5A7VF02 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003380 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-111
Identity = 219/277 (79.06%), Postives = 244/277 (88.09%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGTSC--GTAKSKEIVVSSPCGASQRSKGFEGRKFD 374
           QVLQWVFKE+NEK  +RT   + KKGTSC  GT ++KEIVVSSPCG SQ SKGFEGRKFD
Sbjct: 77  QVLQWVFKETNEKQRERTQ--STKKGTSCDKGTGRTKEIVVSSPCGNSQGSKGFEGRKFD 136

Query: 375 IKKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPK 434
           +KKLK++ALLCRKDIAKSCFY+TINIKRPR QGF+NMQQYW QKMKKED A+ I E+G K
Sbjct: 137 LKKLKTYALLCRKDIAKSCFYSTINIKRPRTQGFDNMQQYWIQKMKKEDIARGIIEIGQK 196

Query: 435 ADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEK 494
           AD  SVHAG KVLPITDAT+ EQCSNK EKKV++NGE+KTK+KSR+KELLRWA+AS+SEK
Sbjct: 197 AD--SVHAGTKVLPITDATLAEQCSNKSEKKVLANGENKTKAKSRMKELLRWAMASRSEK 256

Query: 495 GGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATS-F 554
           GGKFITGKVSR RN+ TLKAG DDD+   DSPKISFRWEAESCSSISSAYSS+SA ++ F
Sbjct: 257 GGKFITGKVSRLRNRATLKAGLDDDEESNDSPKISFRWEAESCSSISSAYSSMSAVSAPF 316

Query: 555 KNCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           KNCSITLNSTAI EINQ YPR GSWITTDSEFVVLEL
Sbjct: 317 KNCSITLNSTAINEINQCYPRRGSWITTDSEFVVLEL 349

[Close]
BLAST of Sed0024927 vs. ExPASy TrEMBL
Match: A0A1S3BYW0 (uncharacterized protein LOC103494908 OS=Cucumis melo OX=3656 GN=LOC103494908 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-111
Identity = 219/277 (79.06%), Postives = 244/277 (88.09%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGTSC--GTAKSKEIVVSSPCGASQRSKGFEGRKFD 374
           QVLQWVFKE+NEK  +RT   + KKGTSC  GT ++KEIVVSSPCG SQ SKGFEGRKFD
Sbjct: 19  QVLQWVFKETNEKQRERTQ--STKKGTSCDKGTGRTKEIVVSSPCGNSQGSKGFEGRKFD 78

Query: 375 IKKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPK 434
           +KKLK++ALLCRKDIAKSCFY+TINIKRPR QGF+NMQQYW QKMKKED A+ I E+G K
Sbjct: 79  LKKLKTYALLCRKDIAKSCFYSTINIKRPRTQGFDNMQQYWIQKMKKEDIARGIIEIGQK 138

Query: 435 ADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEK 494
           AD  SVHAG KVLPITDAT+ EQCSNK EKKV++NGE+KTK+KSR+KELLRWA+AS+SEK
Sbjct: 139 AD--SVHAGTKVLPITDATLAEQCSNKSEKKVLANGENKTKAKSRMKELLRWAMASRSEK 198

Query: 495 GGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATS-F 554
           GGKFITGKVSR RN+ TLKAG DDD+   DSPKISFRWEAESCSSISSAYSS+SA ++ F
Sbjct: 199 GGKFITGKVSRLRNRATLKAGLDDDEESNDSPKISFRWEAESCSSISSAYSSMSAVSAPF 258

Query: 555 KNCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           KNCSITLNSTAI EINQ YPR GSWITTDSEFVVLEL
Sbjct: 259 KNCSITLNSTAINEINQCYPRRGSWITTDSEFVVLEL 291

[Close]
BLAST of Sed0024927 vs. ExPASy TrEMBL
Match: A0A6J1DRU9 (uncharacterized protein LOC111023725 OS=Momordica charantia OX=3673 GN=LOC111023725 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 7.1e-110
Identity = 209/275 (76.00%), Postives = 239/275 (86.91%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGT-SCGTAKSKEIVVSSPCGASQRSKGFEGRKFDI 374
           QVLQW+ KE++EKD QRTS  +KK+ +   GT +SKEIVVS  CGASQRSKGFEGRKFDI
Sbjct: 3   QVLQWLCKETDEKDAQRTSHSSKKETSWDKGTVRSKEIVVSVHCGASQRSKGFEGRKFDI 62

Query: 375 KKLKSFALLCRKDIAKSCFYNTINIKRPRAQGFENMQQYWNQKMKKEDFAKRIREVGPKA 434
           +KLKSFALLCRKDIAKSCFY+TINIKRPR QGF+NM QYW QKMKKED  + IRE+G KA
Sbjct: 63  RKLKSFALLCRKDIAKSCFYSTINIKRPRTQGFDNMHQYWIQKMKKEDIVREIREIGQKA 122

Query: 435 DSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVASKSEKG 494
           DSSS HAG +VLPITDA++VEQCSNK +KKV+ NGESK K+KSR+KELLRWA+ASKSEKG
Sbjct: 123 DSSSAHAGTRVLPITDASIVEQCSNKTDKKVMPNGESKNKAKSRMKELLRWAMASKSEKG 182

Query: 495 GKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAATSFKN 554
           G+FITGK SR RN+ TLKAG DDD+   DSPKISFRWE ESCS++SSAYSS+SA +S +N
Sbjct: 183 GRFITGKASRMRNRETLKAGPDDDRTSNDSPKISFRWETESCSTVSSAYSSISAVSSLRN 242

Query: 555 CSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           CS+TL STAI+EIN YYPR GSWITTDSEFVVLEL
Sbjct: 243 CSLTLGSTAIQEINHYYPRKGSWITTDSEFVVLEL 277

[Close]
BLAST of Sed0024927 vs. ExPASy TrEMBL
Match: A0A6J1HQH1 (uncharacterized protein LOC111466875 OS=Cucurbita maxima OX=3661 GN=LOC111466875 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.2e-102
Identity = 208/280 (74.29%), Postives = 232/280 (82.86%), Query Frame = 0 

Query: 315 QVLQWVFKESNEKDGQRTSDFTKKKGTSC--GTAKSKEIV--VSSPCGASQRSKGFEGRK 374
           QVLQWVFKE+NEKD        KKK TSC  G+++SKEIV  VS+ CG SQRSKGFEGR+
Sbjct: 3   QVLQWVFKETNEKDS------IKKKETSCDKGSSRSKEIVVSVSNHCGGSQRSKGFEGRR 62

Query: 375 FDIKKLKSFALLCRKDIAKSCFYNTINIKRPRAQ--GFENMQQYWNQKMKKEDFAKRIRE 434
           FD+K+LKSFALLCRKDIAKSCFY+TINIKRPR    GF+NM QYW  KMKKED       
Sbjct: 63  FDLKRLKSFALLCRKDIAKSCFYSTINIKRPRTTQGGFDNMHQYWIHKMKKED------- 122

Query: 435 VGPKADSSSVHAGIKVLPITDATMVEQCSNKHEKKVVSNGESKTKSKSRVKELLRWAVAS 494
           +G K DS SVHAG KVLPITDAT+VEQC +K  KKVV+NGESKTK++SRVKELLRWA+AS
Sbjct: 123 IGQKVDSCSVHAGTKVLPITDATLVEQCGSKGVKKVVANGESKTKARSRVKELLRWAMAS 182

Query: 495 KSEKGGKFITGKVSRTRNQGTLKAGRDDDQARGDSPKISFRWEAESCSSISSAYSSVSAA 554
           +SEKGGKFITGKVSR + +GTL    DDD+A  DSPKISFRWEAESCSSISSAY+SVS A
Sbjct: 183 RSEKGGKFITGKVSRMQKRGTLNTSLDDDRASNDSPKISFRWEAESCSSISSAYTSVSGA 242

Query: 555 TSFKNCSITLNSTAIKEINQYYPRNGSWITTDSEFVVLEL 589
           +SFKNCSITLNSTAI E+N YYPR GSWITTDSEFVVLEL
Sbjct: 243 SSFKNCSITLNSTAIHEMNHYYPRKGSWITTDSEFVVLEL 269

[Close]
BLAST of Sed0024927 vs. TAIR 10
Match: AT3G07030.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 156.4 bits (394), Expect = 7.2e-38
Identity = 114/238 (47.90%), Postives = 128/238 (53.78%), Query Frame = 0 

Query: 1   MDRYQKVEKRKPESPINENEIRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKA 60
           MDRYQ+V K KPESPINENEIRITS+G IRNYI+YA+SLLQEK V++IVLKAMGQAISK 
Sbjct: 1   MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60

Query: 61  VAIAEILKKRIPRLHQETAISSVSITDVWEPIEEGLVP---------------------- 120
           VAI+EILK +IP LHQ+ AISS+SITDVWEP EEGL P                      
Sbjct: 61  VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120

Query: 121 ---YQAPLFVEQPKQQYNNQQQQQQQLPRQPRIYHIAVNEGDFMFDILLLDYGTRSFTSF 180
              YQAP   +Q K QY  QQ +Q +LP                       YG       
Sbjct: 121 SPGYQAPAQSDQSKPQYQPQQGRQARLPYNA--------------------YG------- 180

Query: 181 DIFLAFLQIHMAKAEGVVEGEGVVGEEVDMVTIK-----VDTGTIKVDTGTTKVDTET 209
                         EG V  EG  GEEVDM T K        GTIK    T KV  +T
Sbjct: 181 -------------EEGEVVAEGEAGEEVDMETTKGVMKEKTKGTIKKIIKTMKVGIQT 198

[Close]
BLAST of Sed0024927 vs. TAIR 10
Match: AT1G76010.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 126.3 bits (316), Expect = 8.0e-29
Identity = 62/100 (62.00%), Postives = 78/100 (78.00%), Query Frame = 0 

Query: 1   MDRYQKVEKRKPESPINENEIRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKA 60
           MD+YQ+V K K ++PI+ NEIRITSQG  RNYITYA +LLQ+K   E+V KAMG+AI+K 
Sbjct: 1   MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60

Query: 61  VAIAEILKKRIPRLHQETAISSVSITDVWEPIEEGLVPYQ 101
           V I E++K+RIP LHQ T+I S  ITD WEP EEGL+P +
Sbjct: 61  VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLE 100

[Close]
BLAST of Sed0024927 vs. TAIR 10
Match: AT1G20220.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 125.2 bits (313), Expect = 1.8e-28
Identity = 61/96 (63.54%), Postives = 76/96 (79.17%), Query Frame = 0 

Query: 1  MDRYQKVEKRKPESPINENEIRITSQGAIRNYITYASSLLQEKRVREIVLKAMGQAISKA 60
          MD+YQ+VEK K ++PI ENEIRITS G  RNYITYA +LLQE +  E++ KAMG+AI+K+
Sbjct: 1  MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60

Query: 61 VAIAEILKKRIPRLHQETAISSVSITDVWEPIEEGL 97
          V I E++K+RIP LHQ T+I S  ITD WEP EEGL
Sbjct: 61 VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGL 96

[Close]
BLAST of Sed0024927 vs. TAIR 10
Match: AT3G24750.1 (unknown protein; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 8; Metazoa - 2; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-08
Identity = 54/141 (38.30%), Postives = 79/141 (56.03%), Query Frame = 0 

Query: 457 SNKHEKKVVSNGESKTKSK-SRVKELLRWAVASKSEKGGKFITGKV-SRTRNQGTLKAGR 516
           +NK + K   + +SK K+  SR+KEL++WA A+KS+K  KF T K+    +N+  LK  R
Sbjct: 35  TNKEKSK---SEQSKGKATLSRMKELIKWAAAAKSDKAVKFFTPKIMMELKNRRKLKMMR 94

Query: 517 DDDQARGD------SPKISFRWE-AESCSSISSAYSSVSAATSFKNCSITLNSTAIKEIN 576
           + ++          S  IS RWE +ESC++ SS  S   +  S     ++L+ T +    
Sbjct: 95  EVNEEESTKRMSSVSANISLRWESSESCTTNSS--SDHISIVSSPGILVSLSPTPLYRCR 154

Query: 577 QYYPRNGSWITTDSEFVVLEL 589
               R  +WITTDSEFVVLEL
Sbjct: 155 S---RKCNWITTDSEFVVLEL 167

The following BLAST results are available for this feature:
BLAST of Sed0024927 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7011317.11.8e-13963.51Ribonuclease P protein subunit p25-like protein [Cucurbita argyrosperma subsp. a... [more]
XP_038888003.11.9e-11782.25uncharacterized protein LOC120077942 [Benincasa hispida][more]
XP_004152019.21.2e-11179.35uncharacterized protein LOC101208427 [Cucumis sativus][more]
KGN58340.11.2e-11179.35hypothetical protein Csa_017426 [Cucumis sativus][more]
KAA0066288.14.6e-11179.06uncharacterized protein E6C27_scaffold21G003380 [Cucumis melo var. makuwa][more]
BLAST of Sed0024927 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q91WE33.7e-0735.37Ribonuclease P protein subunit p25 OS=Mus musculus OX=10090 GN=Rpp25 PE=2 SV=1[more]
Q5PPN23.7e-0735.37Ribonuclease P protein subunit p25 OS=Rattus norvegicus OX=10116 GN=Rpp25 PE=2 S... [more]
Q8N5L83.2e-0635.96Ribonuclease P protein subunit p25-like protein OS=Homo sapiens OX=9606 GN=RPP25... [more]
Q99JH13.2e-0635.96Ribonuclease P protein subunit p25-like protein OS=Mus musculus OX=10090 GN=Rpp2... [more]
Q9BUL94.1e-0634.15Ribonuclease P protein subunit p25 OS=Homo sapiens OX=9606 GN=RPP25 PE=1 SV=1[more]
BLAST of Sed0024927 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8R05.8e-11279.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G624080 PE=4 SV=1[more]
A0A5A7VF022.2e-11179.06Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3BYW02.2e-11179.06uncharacterized protein LOC103494908 OS=Cucumis melo OX=3656 GN=LOC103494908 PE=... [more]
A0A6J1DRU97.1e-11076.00uncharacterized protein LOC111023725 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1HQH13.2e-10274.29uncharacterized protein LOC111466875 OS=Cucurbita maxima OX=3661 GN=LOC111466875... [more]
BLAST of Sed0024927 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07030.17.2e-3847.90Alba DNA/RNA-binding protein [more]
AT1G76010.18.0e-2962.00Alba DNA/RNA-binding protein [more]
AT1G20220.11.8e-2863.54Alba DNA/RNA-binding protein [more]
AT3G24750.12.0e-0838.30unknown protein; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002775DNA/RNA-binding protein Alba-likePFAMPF01918Albacoord: 19..80
e-value: 2.7E-17
score: 62.3
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 14..104
e-value: 2.4E-27
score: 96.7
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 16..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..523
NoneNo IPR availablePANTHERPTHR36038OS06G0102750 PROTEINcoord: 315..588
NoneNo IPR availablePANTHERPTHR36038:SF3OS06G0102750 PROTEINcoord: 315..588

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0024927.1Sed0024927.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding