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Sed0024862 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCAAACTAAGCTAAAGCCAACATCACCAAAGCCATGGGAGCAGCTCGTGGTGTCATCGTACTCCAATGCGCAAATGATTGGGAACCTCATTTCGAGAACTCGAAGAGAAATAATAAACTGGTAGGCGCGTTTTTGGTTTTGTTTAGGGTTTACGATGGTCTTAAAACTTTTATCTGTCTCTTGTTTCTATTTTTTTTTTTAAACTAGGGTAACTATGCTCATTCCTAGGCCAGGCAGCAATACTCTTATTTCTATTTTTATATCTTATACTTTTACTACAAAAATCAAATCTTTCGCCGATGGTAAAAACAGTTGATGTATACAAGACCGATGGTTTTTTCGCCGATGGCAAGAACGTCGGCATATCCGGTTAGTGTAACATACACATGAATTAAAATATTTTCTTTCCTTTATTTGTACAAATATTTAACATATTATAAGTAAATAAATTGGGGGAGGGGGACCCAAACTCTACATAGAGTGTATCGCTGCTTTCAACTATAACTAATTTACTAACAAACTATGAAACTAACGTTGTTGAAGATATATTTTCAATGTATTAATGTCTTGCGATTAGTAGTTGGGGGTCTCGCTACCCGGTCTGCAAGTGGGAGTGGGGGGCAACACTCCCGTTGCACAAACGTTTTTTTGCATTGCATACAATTGCTTTGAAAATAGCAGCAATGCATTTCGCATGCGTTTAGCGCAACCAGCATTTGCACCCCGTAAGGCTAGTACTTCTGCATTATGTTGTGCGTTTCTCGTGTGCTAGCGCATCCGCATTATATGCACTCTCATTAAACCTTAGCTGTATAAATGACATTCATTCTGTAATTTGCATTTGTTCGCCTCTCCTTAATAAAATATCGCTCTCTCTTTGCCTGTAGACTAGTAACACTACGTTAGTGAACCACGTAACTTTTTGTATGTTAGTTCTTCTTCTCTCACGTTTCTTTATTTTTCGAACGGTTGTTGATTGCGATTTTTCATAACAAACGCACTACTAAACCTTTCGGTTTTAACGAATAAATTTTTTGGTGGTTGAATGAAGGTTGTGATAGATTTCAAAGCTGGTTGGTGCGGACCGTGTAGGCTTATGAAGCCTGTATTTGCAGAGTTTGCTTCCAAGTACACAAATGCTGTATTCCTTGAGATCGATGTGGATAAGTTGCAGGTGATCAAGCCTTTTCCCTTCTCTTATTATTCCTTCTATAAATAAATAAATTTAGTATTCTACTTTGGAAAGAGTATATTCTATTTAGTCTAAAAACATTATGTTTTAATAGGTTTCTCAACTCTCAATAATTTTTTTTTTAAAGTTCAATAAATTCTTTTTTAATAAGTTTAAGTCGCTTTAAAAATAAAGCGTTAACAACTATGGTTGTTTGTCTTCAAGGAGTGACACAGTAGTTGAAGACTTGGGTTTTGAGGGTATCTTTCCCTCAAGGTACCAGGTTCGGAATTCATTGTGACACTACTTCTTTAATGTCTTTGATGTCGAAATGGGTGTGATTACCTTGTTTAAAACAAAATTATGATTGCTTGAGGTAAAAAACATTAAACATGTTTTTTTTATTCAATAATAATTGGAAAAGATGTGATTTGATTCTGAACCTATAATCTTATGGTTATATATTAAACAAGATGCAACTACAAATATGTTTTTGGTTGACAACATTATTACACATGTTAAGAGTTGGATTGAAGAGACTAAATTTAAAAATCTATAAATATGTGAGCCTAAAACATATATTTAGCCAAACAAAAAATCATGTATGAGATGTGTACTATAATCCAATTATTATGTCCTTTTTGTTGTTTTATGTTTTTTTTTTCAAAATATCACGTATTAAAACAAAAAAGGAAAAAAAATGCACAAACCATCAAGAATAGTGTTTATAACATTTAACCCCCTAAACTGTCAATTTGTACAATCATTAAACTTTGATAAGTGTTGTAATTAACTCATTTATGCTATTCTAAAAAAAAAAAAAACATTTATGCTAAATTTGAAGAATTCTCACGTGTGAAAAGAATAAACTTGTCACTTTTTTTCTTTTAGCATGCTCTATTTCTTTGGTCTAGAGATTTTGTTTTTGTAACATTTTAATAGAAGAATATAAAAAGGAAAAAAAATGACAAATTTATCCTTCTCGCAGTGTAAAAATCCTTCAAATTTAGTATAAAAGGTTAATTGAAATACTTATCAAAGTTGAGGAGTAGTGATTACTCGAATTAAAATTTTAAGTAGTTGATTGTTACAAACAACATATTTTAGGAGTGTTTTATACTTTTTCTCGAACAAAAACAAGGTATTATCATTAGTTTATTCAGAAAAAATAAATTATTTCTTGAAAGGAAAGTACGTTGGATGTTCAAACTTGTTATTAGATTCTATAGCACGGCCACAATAAAGAGAAATCAACTTTTTATCAACGTGTCAACATTTTGAGTCACACAACCAATTACTTTTTTCTCATAAAAATGTATGGTTCAAAATGTTAACTCGTTAATAAAAAGTTGAACTTACCTACATATTCAAGGTAAGTTTTTTCTCGAAAACAAATAAAATCAGCTTGAAATATAAGTACAAATAAACAGAATACTTGACTGCTTATGTGTGAGCGGACAAACCTACTTTTGACCCACGTGTCATTTTGCTGTGCTACACAGTTTTTTTTATTAATATTATTTTATATATAAAATAATAATAATAATAATAAGTAAATAAATAAATAAATTGTGTACTACATAGTTGCGCCACGTACCTATGTTGCTTTTATGCAAGTATTCCTCCGAAATGAACAGGTTTTTTCATTGTATAAGGAATATATTTTTTTTTACAATGGAATAAGTCGTTATTTTTGCTTAAAAAAGTCCGATAACTATTTTATTTTTTATTTTTTAAATTTAATTCTACATCAAGTATCTTATTATATATTTTTTGTTGTTGAAACTAAATTAAAATTTAGAAACAAAAAAAGTAGTTTCTAAAAATTTGTTTTTGTTTTTAAAAGTTAGTTAGCACTACGTATTTTTTTTAAGGAAAAATGAATATATTGTAGGAAAGGTGGAACACATTATAAAAAATTTGAGTAAAAATAAGTTTAAATTTCAAAAACTAAAACCAAATAGTTATCCAACGAAATCTTAATTTTGGGTCGATAAGACTTAATTTTGAGAGTAAACATAAAAGTGAGTTTGTGTTAATATTTGAATTTGTAGGTTTTGGCTGAAAGATTTGGGGTGAATGAGATGCCGACATTTCTACTAATTAAACAAGGGCACGTGGTTGATAAAGTGATTGGTGCAGATAAGATTGATCTCGAGAGAGCAATCCTAAAGCACTTAAATACTTGTAATGCATAATCTCTAACATCTCCCAATCACCCAATCTCTATTTAATAATAAAAAGTTACAACTTATTATATATGCTTACCAACTCTATGTTACAACAGATTAATTTTTAGTGTCAAGAGTACTTTTTGAATTCATCGATCAAACTAGTGATGTTACCAAAGATTATCTGCACAATCTAAGGTTGACGTGTATAGGTTTGACGAGGGTGTACCCGTGAAGGTCAAAATGGCATCATTGTTGCTCGAGGTAGCTTAGACTACGTCGAGACTGCATGTGTCATTTTACCTAGCGAAAAGAGCAAACGTCACTCCCCCTCTTCCTTTTTTTTTTTTTAAAAAAAAACAATTGAAAGTTATTTCCCCTTCGATTAGGATAAAAGATCTATGACCATTGTGAGTTTATTTAAACGAATGGCT TTTCAAACTAAGCTAAAGCCAACATCACCAAAGCCATGGGAGCAGCTCGTGGTGTCATCGTACTCCAATGCGCAAATGATTGGGAACCTCATTTCGAGAACTCGAAGAGAAATAATAAACTGGTTGTGATAGATTTCAAAGCTGGTTGGTGCGGACCGTGTAGGCTTATGAAGCCTGTATTTGCAGAGTTTGCTTCCAAGTACACAAATGCTGTATTCCTTGAGATCGATGTGGATAAGTTGCAGGTTTTGGCTGAAAGATTTGGGGTGAATGAGATGCCGACATTTCTACTAATTAAACAAGGGCACGTGGTTGATAAAGTGATTGGTGCAGATAAGATTGATCTCGAGAGAGCAATCCTAAAGCACTTAAATACTTGTAATGCATAATCTCTAACATCTCCCAATCACCCAATCTCTATTTAATAATAAAAAGTTACAACTTATTATATATGCTTACCAACTCTATGTTACAACAGATTAATTTTTAGTGTCAAGAGTACTTTTTGAATTCATCGATCAAACTAGTGATGTTACCAAAGATTATCTGCACAATCTAAGGTTGACGTGTATAGGTTTGACGAGGGTGTACCCGTGAAGGTCAAAATGGCATCATTGTTGCTCGAGGTAGCTTAGACTACGTCGAGACTGCATGTGTCATTTTACCTAGCGAAAAGAGCAAACGTCACTCCCCCTCTTCCTTTTTTTTTTTTTAAAAAAAAACAATTGAAAGTTATTTCCCCTTCGATTAGGATAAAAGATCTATGACCATTGTGAGTTTATTTAAACGAATGGCT ATGGGAGCAGCTCGTGGTGTCATCGTACTCCAATGCGCAAATGATTGGGAACCTCATTTCGAGAACTCGAAGAGAAATAATAAACTGGTTGTGATAGATTTCAAAGCTGGTTGGTGCGGACCGTGTAGGCTTATGAAGCCTGTATTTGCAGAGTTTGCTTCCAAGTACACAAATGCTGTATTCCTTGAGATCGATGTGGATAAGTTGCAGGTTTTGGCTGAAAGATTTGGGGTGAATGAGATGCCGACATTTCTACTAATTAAACAAGGGCACGTGGTTGATAAAGTGATTGGTGCAGATAAGATTGATCTCGAGAGAGCAATCCTAAAGCACTTAAATACTTGTAATGCATAA MGAARGVIVLQCANDWEPHFENSKRNNKLVVIDFKAGWCGPCRLMKPVFAEFASKYTNAVFLEIDVDKLQVLAERFGVNEMPTFLLIKQGHVVDKVIGADKIDLERAILKHLNTCNA Homology
BLAST of Sed0024862 vs. NCBI nr
Match: KAB1220726.1 (Thioredoxin H2 [Morella rubra]) HSP 1 Score: 136.3 bits (342), Expect = 1.6e-28 Identity = 59/105 (56.19%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of Sed0024862 vs. NCBI nr
Match: KAF3791626.1 (Thioredoxin H2 [Nymphaea thermarum]) HSP 1 Score: 134.0 bits (336), Expect = 8.2e-28 Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of Sed0024862 vs. NCBI nr
Match: TMX00056.1 (hypothetical protein EJD97_001449 [Solanum chilense]) HSP 1 Score: 134.0 bits (336), Expect = 8.2e-28 Identity = 57/105 (54.29%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of Sed0024862 vs. NCBI nr
Match: PHT57211.1 (Thioredoxin H2 [Capsicum baccatum]) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27 Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of Sed0024862 vs. NCBI nr
Match: XP_009803170.1 (PREDICTED: thioredoxin H2-like [Nicotiana sylvestris] >XP_016478272.1 PREDICTED: thioredoxin H2-like [Nicotiana tabacum]) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27 Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.5e-28 Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.5e-28 Identity = 56/117 (47.86%), Postives = 78/117 (66.67%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy Swiss-Prot
Match: Q39362 (Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.9e-27 Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 2.5e-27 Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.6e-26 Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy TrEMBL
Match: A0A6A1W8T2 (Thioredoxin H2 OS=Morella rubra OX=262757 GN=CJ030_MR3G002937 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 8.0e-29 Identity = 59/105 (56.19%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy TrEMBL
Match: A0A6N2BZK6 (Thioredoxin domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_001449 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.9e-28 Identity = 57/105 (54.29%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy TrEMBL
Match: A0A2G2XIN7 (Thioredoxin H2 OS=Capsicum baccatum OX=33114 GN=CQW23_05697 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.2e-28 Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy TrEMBL
Match: A0A1S4ANG8 (thioredoxin H2-like OS=Nicotiana tabacum OX=4097 GN=LOC107799645 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.2e-28 Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of Sed0024862 vs. ExPASy TrEMBL
Match: A0A1U7YWN9 (thioredoxin H2-like OS=Nicotiana sylvestris OX=4096 GN=LOC104248584 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.2e-28 Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of Sed0024862 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein ) HSP 1 Score: 122.9 bits (307), Expect = 1.8e-28 Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of Sed0024862 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 ) HSP 1 Score: 119.0 bits (297), Expect = 2.5e-27 Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of Sed0024862 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 111.3 bits (277), Expect = 5.3e-25 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of Sed0024862 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 ) HSP 1 Score: 108.2 bits (269), Expect = 4.5e-24 Identity = 42/95 (44.21%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of Sed0024862 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 ) HSP 1 Score: 107.1 bits (266), Expect = 9.9e-24 Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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