Sed0024834 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATATCGAATGGCTGGTATTCGTGGACGGTGTTGGGATTAGTTATACGAGGAGCAACTGACTGGGTACTCGGCTTATGTTGCTGTTCTTGAATGAATCAGAAAATGAGCATGGATGATATTATTACAATAATCTTTTGTCCCTCTTTTGTAGCTGGATGGATATGCAGGCAGGAAATTTGGAATGAATTCTGTTGTGGGTTCTTATTTGGATCCCTTAGCTGACAAGATAAGTTTTGTATTGCATAACTCTACTAGTTATGTGTATTTGAATTGGGTTGCTTATAATGACTCTGGTTCTGGTTATGGATTCGGGTTCTTATTGGATGCTTTGCATTGGCAATGGTGGAGAATGATCTTCACCATCGTAAGTGTTCTATTCCCTCTAATCTAATACTTGCTGATTCTTGTTGGGTTGTAATGTATATAACTGTAAGATAGAACTCTCGACTGTTGGAGAAAATCATTGTTCATAGCATTTAATTTTTCTTGTTTCGAGTCTCCATTCTAGTCACTCCATGGATGTAGCCAACTGGGTTATCATGTTTTGATGTTGAAGATTGAACAAGTTTGCAAATTTTCTTAACATGCACTTATGGGGCTGTTTGTTTGACATATTTAGGTAGGATTTAGCTCCAAGAATTATCTTGAGTAGTTAAAAATTGAGGGTGGAAGCCAAAAACTTGTTTGGATGTAGTTATTGTGTAGAGTAGTTAGAGTCAAAACCTTGTTTAGATGTAAATTTAAAATGAATAGTCATTTTTAGTAGTTAAAAAGAAATGATTAAAAATAAGTTATTTTGATTGATTTAAAATGAGTGGTTAGAAATTGATTAAAAATGAATTGTTAGAAATGAAACTTATTTTTAAAAGTAAAAATGAAGATGAGTTAGTAAAAATTCGTTAAGTTGTAGGTTTGCAAGGAGGAGTTAATAAATCCTAAAACTAAATCCTACCTAAATATGCCAAACAAACAGCCCCTAGCAACACTATATAGTCAGGCACTCGATGGGATTCTCTGGCAGATGTAGATATTTCTTGATTGACCTATGACAATATTTTGTAGATATTTTCTGTGTCTCCATTCTTTTGATGTCTCCCATGTCTCCATTTTAAGGAAAAGGCGTGGTTACCCAAATATAGCGAAGCAATGTTCCGATTTCCTAGTTTCCAAAAAATAATAAAAAACATAACTCTAGCATTTTGTTAGGTCAACACTGTTTTTCAATTAGTATCGGTGACTGCCGCCCTTATGCAACCTGAGATTGGAACACAGGAGACCGAGCTGTAGAATGGAGATTCTTAATACCTTTGCATATCACATCATTAAATCACATTATTAGAAAACTTACCCTTATTTTGACCCGGTTGCAGTTTGCTAGAAGCATAA ATGATATCGAATGGCTGGTATTCGTGGACGGTGTTGGGATTAGTTATACGAGGAGCAACTGACTGGCTGGATGGATATGCAGGCAGGAAATTTGGAATGAATTCTGTTGTGGGTTCTTATTTGGATCCCTTAGCTGACAAGATAAGGTGGAAGCCAAAAACTTGCACTCGATGGGATTCTCTGGCAGATGTCAACACTGTTTTTCAATTAGTATCGGTGACTGCCGCCCTTATGCAACCTGAGATTGGAACACAGGAGACCGAGCTTTTGCTAGAAGCATAA ATGATATCGAATGGCTGGTATTCGTGGACGGTGTTGGGATTAGTTATACGAGGAGCAACTGACTGGCTGGATGGATATGCAGGCAGGAAATTTGGAATGAATTCTGTTGTGGGTTCTTATTTGGATCCCTTAGCTGACAAGATAAGGTGGAAGCCAAAAACTTGCACTCGATGGGATTCTCTGGCAGATGTCAACACTGTTTTTCAATTAGTATCGGTGACTGCCGCCCTTATGCAACCTGAGATTGGAACACAGGAGACCGAGCTTTTGCTAGAAGCATAA MISNGWYSWTVLGLVIRGATDWLDGYAGRKFGMNSVVGSYLDPLADKIRWKPKTCTRWDSLADVNTVFQLVSVTAALMQPEIGTQETELLLEA Homology
BLAST of Sed0024834 vs. NCBI nr
Match: XP_038882798.1 (cardiolipin synthase (CMP-forming), mitochondrial [Benincasa hispida]) HSP 1 Score: 102.1 bits (253), Expect = 2.7e-18 Identity = 63/146 (43.15%), Postives = 72/146 (49.32%), Query Frame = 0
BLAST of Sed0024834 vs. NCBI nr
Match: XP_023544055.1 (cardiolipin synthase (CMP-forming), mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 101.3 bits (251), Expect = 4.7e-18 Identity = 63/144 (43.75%), Postives = 73/144 (50.69%), Query Frame = 0
BLAST of Sed0024834 vs. NCBI nr
Match: XP_004134756.1 (cardiolipin synthase (CMP-forming), mitochondrial isoform X1 [Cucumis sativus] >KGN49121.1 hypothetical protein Csa_002858 [Cucumis sativus]) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17 Identity = 62/147 (42.18%), Postives = 71/147 (48.30%), Query Frame = 0
BLAST of Sed0024834 vs. NCBI nr
Match: XP_031743178.1 (cardiolipin synthase (CMP-forming), mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17 Identity = 62/147 (42.18%), Postives = 71/147 (48.30%), Query Frame = 0
BLAST of Sed0024834 vs. NCBI nr
Match: XP_022977724.1 (cardiolipin synthase (CMP-forming), mitochondrial [Cucurbita maxima]) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17 Identity = 62/144 (43.06%), Postives = 72/144 (50.00%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy Swiss-Prot
Match: Q93YW7 (Cardiolipin synthase (CMP-forming), mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLS PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 4.2e-14 Identity = 51/143 (35.66%), Postives = 64/143 (44.76%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy Swiss-Prot
Match: Q5N9A1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0789100 PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13 Identity = 50/143 (34.97%), Postives = 63/143 (44.06%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy Swiss-Prot
Match: P44528 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=pgsA PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 3.6e-05 Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy Swiss-Prot
Match: O80952 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGPS1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04 Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy Swiss-Prot
Match: Q8H8U0 (Cardiolipin synthase (CMP-forming), mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0283600 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.3e-04 Identity = 19/44 (43.18%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy TrEMBL
Match: A0A0A0KN19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514820 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 5.0e-18 Identity = 62/147 (42.18%), Postives = 71/147 (48.30%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy TrEMBL
Match: A0A6J1IS73 (cardiolipin synthase (CMP-forming), mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477948 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.6e-18 Identity = 62/144 (43.06%), Postives = 72/144 (50.00%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy TrEMBL
Match: A0A6J1GE99 (cardiolipin synthase (CMP-forming), mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111453367 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.6e-18 Identity = 62/144 (43.06%), Postives = 72/144 (50.00%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy TrEMBL
Match: A0A5D3CNC9 (Cardiolipin synthase (CMP-forming) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006570 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.1e-16 Identity = 61/147 (41.50%), Postives = 70/147 (47.62%), Query Frame = 0
BLAST of Sed0024834 vs. ExPASy TrEMBL
Match: A0A6J1CJY2 (cardiolipin synthase (CMP-forming), mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012304 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.1e-16 Identity = 61/144 (42.36%), Postives = 71/144 (49.31%), Query Frame = 0
BLAST of Sed0024834 vs. TAIR 10
Match: AT4G04870.1 (cardiolipin synthase ) HSP 1 Score: 78.6 bits (192), Expect = 3.0e-15 Identity = 51/143 (35.66%), Postives = 64/143 (44.76%), Query Frame = 0
BLAST of Sed0024834 vs. TAIR 10
Match: AT2G39290.1 (phosphatidylglycerolphosphate synthase 1 ) HSP 1 Score: 47.4 bits (111), Expect = 7.4e-06 Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 0
BLAST of Sed0024834 vs. TAIR 10
Match: AT3G55030.1 (phosphatidylglycerolphosphate synthase 2 ) HSP 1 Score: 45.1 bits (105), Expect = 3.7e-05 Identity = 20/45 (44.44%), Postives = 27/45 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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