Sed0024832 (gene) Chayote v1

Overview


Name	Sed0024832
Type	gene
Organism	Sechium edule (Chayote v1)
Description	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1
Location	LG08: 1492695 .. 1500031 (+)
RNA-Seq Expression	Sed0024832
Synteny	Sed0024832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAAATTGCTAGAGAGGTTAAACGACGAAGAATTTCCAGTTCAGGATTAGACGATGGATCTGAGGTATTATTATACTTAATTACTTGTCTAATCTTAGTTTATGTTCTTATTTATTAATTTTGTTTTTCTAGTCATTTTTTGCGCACTAATGTAGCTTGACGTACTGCAATTTGTAGTTTAAAAAAAATAGTGTTAATTTGTTCATAATAATCATGTTTAATTAATGTATTTGAAATTACTTAAAATGCAGTCCGAAGAACAGCGATTGTTGAGCGATCAAATACAAAGGGAGCAATTAGAGCACAATATACGACAACGGGATGCAGCTCGAACCAAAAAGCCATATTATAAGAATTCCCAGAATTTGACCGACAAAGATCCGCAAGGTTTGATTAGTTAACTAATTAATTTTATTCATCAATTATACAATAACCGATTTGTAACTAGGGGTGAACATGGGTTGACTTGGGTTAGGTTGAGAGGGGTTTTCAACCCAACCCAAATTTTCGGGTTGTTTCCAATTCAACCCAATTAAATAGACAACCTGGTTGGGTTATCGGGCCCAATAATAAATTATAAATATAAATATTTTTTTATCAAATTATTCCTACATTATACAAAGGGGTTTTTACATGTATATTTTTTTTAAAAAAATAATTCTATGTATAACACAATTTCCAAACTTATTCATTTGTGGCACAAAAGTGATTGAAGTCTACCAGTTTGCCGATTGAAGTCTATCAGTTGAATTGATAGAAGTCTAAAGTCTATCAGTTGAACTAATAGAAGCCTATTAGTTGACTTTAGAAGTCTAAAGTCTATCAGCTGAGCTGATAGAAATCTAAAATCTATCAGTTGAATTGATAGAAGTCTAAATAGGAATTTTGGGCAAAATGTACTATAAGTGAAATTATTTTAAAAAATGGGTTACAATTGTAATATAGAGCAAAAAATATGCTATGGAGGATAAATTCCCGAAGTATTATTATAAGGGAATTTTGCATGTATATTAAAAAAAACAAAATAATTATCCCAAACTTGTTCATTTGTGGCATAAAAATGATTGAAATCTATCAATTTGCATTGTTCAATCACTTAAAATCGATTGAAGTCTATCAATTGAACGGATAGAAGTCTAAAGTCTGTTGGTTGAACTGACAGAAGTCTATTAGTTGAAGCGATAGAAGTCTATCAATTGAGCTGATAGAAATCTAAAGTCTATTAGTTGAACTGATAGAAGTCTGATGATGTTAGAATAACAATTTTGGGCAAAATGTGCTATGGATGAAATTATTTTTAAAAAATGTGTTATAATTATAATGAAGAGCAAAAAATATGCTATGGAGGATAAATTCACTTATACAAATACACGATGCAATCTTGAATCAAGGTAATAAATTAATATAAATATTACATAAAGTCACACACTATTAATCCTACAATCATAATTCATATAGAAAAAATTTCAAAAATAAAACATTAAACAAAAGATATATAACATAATTTGATAGTATAGTTTATATGATATATAAATTATAAAGACTTGAAAAAATATTAAAGAATATACGAAAATAAAAAGTCTAACAATAATAATTAAATAAATATAGTATATAAAGTTATGTGATAAGTAAAAATATATATTTTCTTAAAGTAAATAATCATTTCGGATTGGTCGGGTTGGGTTGTTTCGGATTGGTCGGGTTGGGTTGGGTTAATTTTAGATCAACCCTTGACCCAACCCAATCCATAAAAATTTCATGATCTTTTGAACTCAACCCAATCCAAAATTGTATTCAACCCAACCCAACCCGTCAAATTGGGTTGGGTTGGTTCGGGTTATTCGGGTTGTATGAACACCCCTATTTGTAACTACATTATAATATCATTGTCCTGCCTTTAATATTCTTAAACAGAAGAGGCATTAATTCGGAGATCAAAAGCTAATTTGGAGAATAGTAATGATGGAGTTCATGTTTTGAGGAAAGTTTCAAGACAAGAATATTTAAAGAAAAGGGAGCAAAAGAAAATAGAAGAAATGAGAGATGATATTGAAGATGATAATCATCTTTTTCAAGGCGTGAAACTTACTGAATCAGAACATGGAGAGCTAAGGTTCTTTTAAATTTTAAATTTTTTTTCTGAAATGGTTTGGTCTATATTGTGAAAATGAAACATTGTGTTTGTTGCAGGTATAAGAAGGAAATATATGACGTCCTTGTGAAGAACCAGACCAATGAGGCTGATGACATTAATGAGGTTATTATATCTTTGATATTTGTTCATTTAAGCTTTTGTCACTAAGATACATCTTAACTATTTATTGATTAATTACCATATTTCAGTACCGAATGCCCGAACCTTATGATCAAGGAATTGTTGATCAAGATAAGAGGTTTGCAGTTCGGGCAGTGCAGCAGCGAACGGATTCGAGTACAGCAAATGAACAACACAAATGGGAGGAACACCAACTAAGGAAAGGAACTATGAAATTTGGTTCCAAAAATAAAAGGCAAGCATCCGGTGATGATTATCAGTAAGTATTTTACGTTTATGACTTTTGTTTACAATATTTTAAGCTATTACTACTTTTATATATAAGTCGTATCATTGTAATGTAATTTTTTTGTTTTTGTTTTTGTTTTAGGTTTGTATTTGAGGACCAGATTGAGTTTATCAAGGCCTCAGTTATGGGAGGTGATGAGGTATATTGACTTTAAACTTTCTTGTGTGCAGTTGTGGTAATTAATGTAGTAAAAAAATCTTGTTTATATCATTTGTTCTTGCCAGTTTATCAATGAAACTCAATCACTTGATCACAAGTCCAAGGCTAAGTCTGCTATGGAGAAGTTGCAGGTAATTTTGACTCTCATTACTCTCTATCAAGTTCATAATTCACATAGATACAAATATATTGTAAATAGATCTTAGTATTTACTGACCTTTTTTTTTTTTTTTAAGATAATGCTTGTTGGTTACAGAGATTTTTTGTGTTCTTTTAGGAGGAGAGGAAAACATTGCCAATCTACCCGTATCGCGATCAACTACTCCAAGCTATTAATGATTATCAGGTTGGTTTCTTTTTAGATTCAAGACTATTGCAATATTCTACTCAAATATGTTTAAGTCTTATATGCCTGCCACTTTTGTAGGTTATTGTAATCGTTGGTGAAACTGGTTCTGGAAAGACAACACAAATACCTCAATACCTTCATGAAGCTGGATAAACAAAGCGAGGGAAAGTAAGATATTTGATACTCATCATCAAGTGAATAATTTATTGAAGTTTTTCTTAGTTTCCCCAATGTAAAATTCATTCTTTTTTACTATCTAGGTTGGATGTACACAGCCGCGTCGTGTTGCTGCTATGAGCATTGCTTCTCGAGTATCTCAAGAACTAGGGGTCAAGCTTGGGCATGAGGTGATGTATTATGGCATATTTTATATGCTTTACATTATTGGCTTTTTTATTTGTTGTTTAAAGAATACAACAAACAACACCTCTCTCATTCTTTGGATTTTCTACCTTTTGTTTCATATGAATTCCTTGAATTTATTTCTCTTAACACCCATCTGTTTTTTAATATTAATAGGTTGGTTATTCAATACGTTTTGAAGATTGCACGTCAGATAAGACTGTTTTGAAGTACATGACAGATGGGATGTTGTTACGAGAATTTCTCGTTGAACCCGACCTTGCAAGCTACAGGTGCACCACCTTACCATTACTATATGTTTTATGTTTATTGACTCCTGTTTTCTAACATATTTTGAAACCTTTTTTAGTGCTATAATGGTGGACGAGGCTCACGAAAGAACATTATCAACCGACGTTCTATTTGGGTTAGTGAAGGCGAGTTCGAGACCCTATTACCGTTTTATTTTATGCATGATGCAGGTGCACCTCTATTGCTAGCGTTGTTTTTTCAAAACTCTTTTTCTAATTATACATGTTTTTTCCTCGTAGGATATTGCAAGGTTCCGACCTGATTTGAAGTTGCTAATTTCAAGTGCAACCCTTGATGCTGAGAAGTTCAGTGATTACTTTGATTCAGCTCCAATATTTAGGATTCCGGGCAGACGATATCCAGTCGAAATTCACTTTACAAAAGCTCCAGAAGCAGACTATTTAGATGCAGCCATGTCACAAAGCCTCCAGGAGATATACTGGTGTTTCTCACCGGTCAAGAAGAGATCGAAGATGCTGAGGAAATTTTAAAACATAGAACTCGAGGACTCGGCACAAAAATTGCAGAACTCATTATCTGTCCCGTATATGCTAACTTACCAACCGAGTTACAGGCTAAGATATTTGAACCCACGCCCATTGGAGCAAGGAAAGTTGTCCTAGCAACAAATATAGCAGAGACATCATTGACGATTGATGGGATAAGCTATGTTGTCGATCCTGGATTTCAAAAAATTAAAACATACAATCCAAGGACGAGGACAGAGTCGTTACAAGTGATTCCCATCTCTAAAGCATCAGCTAATCAGAGAGCAGGTCGTTGTGGACGAACAGGCCCTGGAATGTGCTTTCGTTTATATACCGCTTTTAGTTATTATAATGAGATGGAAGACAATGTTGTACCAGAAATACAAAGAACAAATCTTGCACATGTCGTGCTTATCCTCAAGACCCTTGGTATTCATGAGTTAGTAAATTTTGATTTTATGGACCAACCACCCGTCGAAACATTGCTAGAAGCCTTGGAACTGCTCCAGTGTTTTTAAAGGCGCAAGGCGCACAAAGGCGCAAAAGCTCTCTGGAGCCTGAGGCGCAAGGCGCAAAAAAGGCGCGGGCTTTATATTCTAGGCGCACCATATATAAAAAAATATTTTGAAAAATTATATTTACCACAAAACATATATGTTAATCTATTAAATTATAAAAACATCAATCAAGTCTCTAAAGTTTAAAATATCCAATAAAATATAAAAGCAATAAGTAAATAAGTTCAATAACTATTAAATTTAGTTCAAACAAAAAGACATATAAAAGAAGGGGACACATAATAAATAAAATATTTATTAATACGTATATAATATATTGTACATTGAAATTTTAAATATATAATAAATAAAATTTTAGTTGAAAATTGTGAAAGACATCTTAATAATAATATTTTGGTTAAAATGGTATCTAATGAAAATAGGTCATAATGATAATATTTAATTAAGTAAATTAAACAACTATGGAAAGAATTGAGAGAGATATCAAATTTTAAATGTAAATAAATTCTATTTGAATCAAATATGTATTAATTGTGAGTGGTCAAATCAATAATTTCCATCAATGTCACCTTTCTATTTTCTTTTATTTTATACAAAACTTACTTTTCACTTCATCTTCTTATGACATTTCATCATCTTCTTCTTCTTCTTCTTTCTTTGGTTTGGTTACATTTTGAGGATGTAAAAAAAAAGAAAAGAAAAAGCCCTTGAGGCGCGCGCCTTTTGCGCCAGGGAGCCTCGAGGAAAGGCGCGGTAAGGCGCGCGCCTTATCTTATGCGCTGCGCCTGAGCAAGGCGAGGCGCAAGCATGGCGCCTTGCGCCTTTCTGTGCCTTTTTGGGGCTTTATGGGGCTTTTTAAAACACTGAACTGCTCTATGCACTCAATGCTCTAAATAAACGTAGTGAACTAACTAAGTTGGGCAGGCGGATGGCAGAGTTTCCCGTCGATCCTATGCTTTCGAAAATGATCGTTGCTTCTGAAAAGTTCAAGTGTTCGGAGGAGGCTATTTCTATTGCAGCTATGCTTTCTGTTGGTAATTCGATCTTTTATCGTCCAAAAGACAAACAAGTACATGCCGACAATGCTCGAATGAATTTTCACACTGGGAATGTTGGGGATCACATTGCACTTATGAAGGTTCAATTTCTCTTCTTACCTTCTCAGTATTATTATTTTACATTCTTAACCTTGCATTTATAATTTATCTATTGTTTGATACTTTTTAAAATATAAAAGCACTATTTTTCTCATAACTTAACTTTTATATTTATTACTTAGGTCTACAACTCTTGGAGGGAAACTAATTACTCTACACAATGGTGCTACGAGAATTACATTCAGGTTAGTCCGGTATAATATTTAGCACATTGTGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGAATCTGTTCGTGTGAAGGCTAATATCTTGTTCTTTGTGTTTGATAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTCAAGGGTCTTTTAGAAAGGGTTGAAATCGAACTAACTTCAAATTTCAATGACTTGGACTCAATAAAAAAGACTATAATATCTGGTATGTATCATGCAGCAACATGATGAAAATTTTAATGACTTATTAATAGTTTGGATTTATTGAATTATGATTAAAATTATTTTTCAGGATTTTTCCCTCACGCTGCGAAGTTACAAAAGAACGGTTCTTATCAGACAGCTAAGTCTCCACAGACAGTTCATATACATCCTGGCTCAGGATTGCCTCAGGTAATTAAGTCCTAACTGATGTAAACAAAAAATATCATAGATTAATTTTTTAAGGGGCTGTTTGTTTGACATATTGAGGTAGTTTTTAGGTTAAGGAGTTATATTGAGTAGTTAAAAATTGAGACTTGTGTCAAAAACTCGTTTGGATGTAGTTTTTGTGTAGAAGAGTTAAAGTCAAAATCTTGTTTGGATGTAGAGTTAAAAATGAGTAGTTATTTTTAGTTCTTAAAAAGAAATAATTAAAAATGAATGGTTAAAAATAAGTTATTTTGATTGATTTGAAATGAATGACTAAAAATAAGTGGTTAGAAATGATTGAGTAGTTATAAATGATAATGAATGATTAAAAATGAATTGTTAGGAATGAGAGTTATTTTTTAAAAGTAAAAATGATGAGGAGTTAATAAAAACTCATTTGGATGTAGGTTTTAGAGGAGAAGTTGATAACTCCTACCTATATACGTCAAACAAACACCTAAGGGAACTATTAACTTTTATATGGTTTCTTTGTTGTAAATCGTCATCTCAGGTTCGTCCAAGGTGGGCTATATACCATGAATTGGTATGTACCTCGAAAGAATATATGAGACAGATCACGGAACTCAAGCCTGAATGGTTGATTGAAATTGCTCCACATTTCTATCAGCTCAAGGATGTCGAAGATTGTATGTAAACTTTCTCGAATGTATACCATTTTTTTTATTCGTGAATGTTCGGACTAACTTATGTGTACTTTTTTGTTTGTTGGATAGTGAGTCAAAGGAAGATGCCTCGTGGACAAGGTCGTGCAAGTGCTATTGACAATAAAGATGCAACCAGATGTCGATGA

mRNA sequence

ATGGGAGAAATTGCTAGAGAGGTTAAACGACGAAGAATTTCCAGTTCAGGATTAGACGATGGATCTGAGTCCGAAGAACAGCGATTGTTGAGCGATCAAATACAAAGGGAGCAATTAGAGCACAATATACGACAACGGGATGCAGCTCGAACCAAAAAGCCATATTATAAGAATTCCCAGAATTTGACCGACAAAGATCCGCAAGAAGAGGCATTAATTCGGAGATCAAAAGCTAATTTGGAGAATAGTAATGATGGAGTTCATGTTTTGAGGAAAGTTTCAAGACAAGAATATTTAAAGAAAAGGGAGCAAAAGAAAATAGAAGAAATGAGAGATGATATTGAAGATGATAATCATCTTTTTCAAGGCGTGAAACTTACTGAATCAGAACATGGAGAGCTAAGGTATAAGAAGGAAATATATGACGTCCTTGTGAAGAACCAGACCAATGAGGCTGATGACATTAATGAGTACCGAATGCCCGAACCTTATGATCAAGGAATTGTTGATCAAGATAAGAGGTTTGCAGTTCGGGCAGTGCAGCAGCGAACGGATTCGAGTACAGCAAATGAACAACACAAATGGGAGGAACACCAACTAAGGAAAGGAACTATGAAATTTGGTTCCAAAAATAAAAGGCAAGCATCCGGTGATGATTATCAGTTTGTATTTGAGGACCAGATTGAGTTTATCAAGGCCTCAGTTATGGGAGGTGATGAGTTTATCAATGAAACTCAATCACTTGATCACAAGTCCAAGGCTAAGTCTGCTATGGAGAAGTTGCAGGAGGAGAGGAAAACATTGCCAATCTACCCGTATCGCGATCAACTACTCCAAGCTATTAATGATTATCAGGTTATTGTAATCGTTGGTGAAACTGGTTCTGGAAAGACAACACAAATACCTCAATACCTTCATGAAGTTGGATGTACACAGCCGCGTCGTGTTGCTGCTATGAGCATTGCTTCTCGAGTATCTCAAGAACTAGGGGTCAAGCTTGGGCATGAGGTTGGTTATTCAATACGTTTTGAAGATTGCACGTCAGATAAGACTGTTTTGAAGTACATGACAGATGGGATGTTGTTACGAGAATTTCTCGTTGAACCCGACCTTGCAAGCTACAGTGCTATAATGGTGGACGAGGCTCACGAAAGAACATTATCAACCGACGTTCTATTTGGGTTAGTGAAGGATATTGCAAGGTTCCGACCTGATTTGAAGTTGCTAATTTCAAGTGCAACCCTTGATGCTGAGAAGTTCAGTGATTACTTTGATTCAGCTCCAATATTTAGGATTCCGGGCAGACGATATCCAGTCGAAATTCACTTTACAAAAGCTCCAGAAGCAGACTATTTAGATGCAGCCATGTCACAAAGCCTCCAGGAGATATACTGGTATGCTGAGGAAATTTTAAAACATAGAACTCGAGGACTCGGCACAAAAATTGCAGAACTCATTATCTGTCCCGTATATGCTAACTTACCAACCGAGTTACAGGCTAAGATATTTGAACCCACGCCCATTGGAGCAAGGAAAGTTGTCCTAGCAACAAATATAGCAGAGACATCATTGACGATTGATGGGATAAGCTATGTTGTCGATCCTGGATTTCAAAAAATTAAAACATACAATCCAAGGACGAGGACAGAGTCGTTACAAGTGATTCCCATCTCTAAAGCATCAGCTAATCAGAGAGCAGGTCGTTGTGGACGAACAGGCCCTGGAATGTGCTTTCGTTTATATACCGCTTTTAGTTATTATAATGAGATGGAAGACAATGTTGTACCAGAAATACAAAGAACAAATCTTGCACATGTCGTGCTTATCCTCAAGACCCTTGGTATTCATGAGTTAGTAAATTTTGATTTTATGGACCAACCACCCGTCGAAACATTGCTAGAAGCCTTGGAACTGCTCCATGAACTAACTAAGTTGGGCAGGCGGATGGCAGAGTTTCCCGTCGATCCTATGCTTTCGAAAATGATCGTTGCTTCTGAAAAGTTCAAGTGTTCGGAGGAGGCTATTTCTATTGCAGCTATGCTTTCTGTTGGTAATTCGATCTTTTATCGTCCAAAAGACAAACAAGTACATGCCGACAATGCTCGAATGAATTTTCACACTGGGAATGTTGGGGATCACATTGCACTTATGAAGGTCTACAACTCTTGGAGGGAAACTAATTACTCTACACAATGGTGCTACGAGAATTACATTCAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTCAAGGGTCTTTTAGAAAGGGTTGAAATCGAACTAACTTCAAATTTCAATGACTTGGACTCAATAAAAAAGACTATAATATCTGGATTTTTCCCTCACGCTGCGAAGTTACAAAAGAACGGTTCTTATCAGACAGCTAAGTCTCCACAGACAGTTCATATACATCCTGGCTCAGGATTGCCTCAGGTTCGTCCAAGGTGGGCTATATACCATGAATTGGTATGTACCTCGAAAGAATATATGAGACAGATCACGGAACTCAAGCCTGAATGGTTGATTGAAATTGCTCCACATTTCTATCAGCTCAAGGATGTCGAAGATTTGAGTCAAAGGAAGATGCCTCGTGGACAAGGTCGTGCAAGTGCTATTGACAATAAAGATGCAACCAGATGTCGATGA

Coding sequence (CDS)

ATGGGAGAAATTGCTAGAGAGGTTAAACGACGAAGAATTTCCAGTTCAGGATTAGACGATGGATCTGAGTCCGAAGAACAGCGATTGTTGAGCGATCAAATACAAAGGGAGCAATTAGAGCACAATATACGACAACGGGATGCAGCTCGAACCAAAAAGCCATATTATAAGAATTCCCAGAATTTGACCGACAAAGATCCGCAAGAAGAGGCATTAATTCGGAGATCAAAAGCTAATTTGGAGAATAGTAATGATGGAGTTCATGTTTTGAGGAAAGTTTCAAGACAAGAATATTTAAAGAAAAGGGAGCAAAAGAAAATAGAAGAAATGAGAGATGATATTGAAGATGATAATCATCTTTTTCAAGGCGTGAAACTTACTGAATCAGAACATGGAGAGCTAAGGTATAAGAAGGAAATATATGACGTCCTTGTGAAGAACCAGACCAATGAGGCTGATGACATTAATGAGTACCGAATGCCCGAACCTTATGATCAAGGAATTGTTGATCAAGATAAGAGGTTTGCAGTTCGGGCAGTGCAGCAGCGAACGGATTCGAGTACAGCAAATGAACAACACAAATGGGAGGAACACCAACTAAGGAAAGGAACTATGAAATTTGGTTCCAAAAATAAAAGGCAAGCATCCGGTGATGATTATCAGTTTGTATTTGAGGACCAGATTGAGTTTATCAAGGCCTCAGTTATGGGAGGTGATGAGTTTATCAATGAAACTCAATCACTTGATCACAAGTCCAAGGCTAAGTCTGCTATGGAGAAGTTGCAGGAGGAGAGGAAAACATTGCCAATCTACCCGTATCGCGATCAACTACTCCAAGCTATTAATGATTATCAGGTTATTGTAATCGTTGGTGAAACTGGTTCTGGAAAGACAACACAAATACCTCAATACCTTCATGAAGTTGGATGTACACAGCCGCGTCGTGTTGCTGCTATGAGCATTGCTTCTCGAGTATCTCAAGAACTAGGGGTCAAGCTTGGGCATGAGGTTGGTTATTCAATACGTTTTGAAGATTGCACGTCAGATAAGACTGTTTTGAAGTACATGACAGATGGGATGTTGTTACGAGAATTTCTCGTTGAACCCGACCTTGCAAGCTACAGTGCTATAATGGTGGACGAGGCTCACGAAAGAACATTATCAACCGACGTTCTATTTGGGTTAGTGAAGGATATTGCAAGGTTCCGACCTGATTTGAAGTTGCTAATTTCAAGTGCAACCCTTGATGCTGAGAAGTTCAGTGATTACTTTGATTCAGCTCCAATATTTAGGATTCCGGGCAGACGATATCCAGTCGAAATTCACTTTACAAAAGCTCCAGAAGCAGACTATTTAGATGCAGCCATGTCACAAAGCCTCCAGGAGATATACTGGTATGCTGAGGAAATTTTAAAACATAGAACTCGAGGACTCGGCACAAAAATTGCAGAACTCATTATCTGTCCCGTATATGCTAACTTACCAACCGAGTTACAGGCTAAGATATTTGAACCCACGCCCATTGGAGCAAGGAAAGTTGTCCTAGCAACAAATATAGCAGAGACATCATTGACGATTGATGGGATAAGCTATGTTGTCGATCCTGGATTTCAAAAAATTAAAACATACAATCCAAGGACGAGGACAGAGTCGTTACAAGTGATTCCCATCTCTAAAGCATCAGCTAATCAGAGAGCAGGTCGTTGTGGACGAACAGGCCCTGGAATGTGCTTTCGTTTATATACCGCTTTTAGTTATTATAATGAGATGGAAGACAATGTTGTACCAGAAATACAAAGAACAAATCTTGCACATGTCGTGCTTATCCTCAAGACCCTTGGTATTCATGAGTTAGTAAATTTTGATTTTATGGACCAACCACCCGTCGAAACATTGCTAGAAGCCTTGGAACTGCTCCATGAACTAACTAAGTTGGGCAGGCGGATGGCAGAGTTTCCCGTCGATCCTATGCTTTCGAAAATGATCGTTGCTTCTGAAAAGTTCAAGTGTTCGGAGGAGGCTATTTCTATTGCAGCTATGCTTTCTGTTGGTAATTCGATCTTTTATCGTCCAAAAGACAAACAAGTACATGCCGACAATGCTCGAATGAATTTTCACACTGGGAATGTTGGGGATCACATTGCACTTATGAAGGTCTACAACTCTTGGAGGGAAACTAATTACTCTACACAATGGTGCTACGAGAATTACATTCAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTCAAGGGTCTTTTAGAAAGGGTTGAAATCGAACTAACTTCAAATTTCAATGACTTGGACTCAATAAAAAAGACTATAATATCTGGATTTTTCCCTCACGCTGCGAAGTTACAAAAGAACGGTTCTTATCAGACAGCTAAGTCTCCACAGACAGTTCATATACATCCTGGCTCAGGATTGCCTCAGGTTCGTCCAAGGTGGGCTATATACCATGAATTGGTATGTACCTCGAAAGAATATATGAGACAGATCACGGAACTCAAGCCTGAATGGTTGATTGAAATTGCTCCACATTTCTATCAGCTCAAGGATGTCGAAGATTTGAGTCAAAGGAAGATGCCTCGTGGACAAGGTCGTGCAAGTGCTATTGACAATAAAGATGCAACCAGATGTCGATGA

Protein sequence

MGEIAREVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQGIVDQDKRFAVRAVQQRTDSSTANEQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFINETQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQIPQYLHEVGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSLQEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEALELLHELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMPRGQGRASAIDNKDATRCR

Homology

[Close]

BLAST of Sed0024832 vs. NCBI nr
Match: XP_038879655.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879656.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879657.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879658.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879659.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879660.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida])

HSP 1 Score: 1372.8 bits (3552), Expect = 0.0e+00
Identity = 733/912 (80.37%), Postives = 797/912 (87.39%), Query Frame = 0


Query: 6    REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
            R+VKRR  +SS  DDGSESEE+R L DQ +REQLE N+R+RDAA TKK      Q L+ K
Sbjct: 150  RQVKRR--ASSSEDDGSESEEER-LRDQREREQLEQNMRERDAAGTKK---LTEQKLSRK 209

Query: 66   DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
              +EE  IRRS+A LE  N+G+  LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 210  --EEEEAIRRSEA-LE--NNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 269

Query: 126  LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
            LTE+E+ ELRYKKEIY+ LVK +T+EADDINEYRMPE YDQ G V+QDKRFAV A+Q+  
Sbjct: 270  LTEAEYRELRYKKEIYE-LVKKRTDEADDINEYRMPEAYDQEGGVNQDKRFAV-ALQRYR 329

Query: 186  DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
            DS  A+      EQ  WEEHQ+ K TMKFGSKNK+QAS DDYQFVFEDQIEFIKASVM G
Sbjct: 330  DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQAS-DDYQFVFEDQIEFIKASVMEG 389

Query: 246  DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
            DEF++E  T+SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 390  DEFVDERQTESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 449

Query: 306  KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
            KTTQIPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 450  KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 509

Query: 366  DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
            DKTVLKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 510  DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 569

Query: 426  LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
            LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+  +L        
Sbjct: 570  LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 629

Query: 486  ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
                     QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTPIGAR
Sbjct: 630  GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 689

Query: 546  KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
            KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT  E+LQV PISKASANQRAGR GR
Sbjct: 690  KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 749

Query: 606  TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
            TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E 
Sbjct: 750  TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 809

Query: 666  LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
            LL+ALELL+         ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 810  LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 869

Query: 726  VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
            +GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 870  IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 929

Query: 786  MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
            MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 930  MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 989

Query: 846  TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
            TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS 
Sbjct: 990  TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1046

[Close]

BLAST of Sed0024832 vs. NCBI nr
Match: XP_022134864.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia] >XP_022134865.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia] >XP_022134866.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia])

HSP 1 Score: 1372.1 bits (3550), Expect = 0.0e+00
Identity = 729/911 (80.02%), Postives = 794/911 (87.16%), Query Frame = 0


Query: 10   RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
            RRR +SS  DDG ESEE+R L DQ +REQLE NIR+RDAA T+K        L+ K  +E
Sbjct: 164  RRRTTSSEDDDGYESEEER-LRDQREREQLEQNIRERDAAGTRK---LTEPKLSRK--EE 223

Query: 70   EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
            +  IRRSKA LE  NDG+  LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVKLTE+
Sbjct: 224  DEAIRRSKA-LE--NDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEA 283

Query: 130  EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRTDSST 189
            E+ ELRYKKEIY+ LVK +T+EADDI+EYRMPE YDQ G V+QDKRFAV A+Q+  DS T
Sbjct: 284  EYRELRYKKEIYE-LVKKRTDEADDIDEYRMPEAYDQEGGVNQDKRFAV-AMQRYRDSGT 343

Query: 190  AN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFI 249
            A+      EQ  WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM GDEF+
Sbjct: 344  ADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEGDEFV 403

Query: 250  N--ETQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQ 309
            +  ET+SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSGKTTQ
Sbjct: 404  DERETESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQ 463

Query: 310  IPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTV 369
            IPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTSDKTV
Sbjct: 464  IPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTV 523

Query: 370  LKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS 429
            LKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS
Sbjct: 524  LKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS 583

Query: 430  ATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL------------ 489
            ATLDAEKFSDYFDSAPIF+IPGRRYPVEIHFTKAPEADYLDAA+  +L            
Sbjct: 584  ATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKPPGDIL 643

Query: 490  -----QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVL 549
                 QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP+GARKVVL
Sbjct: 644  VFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGARKVVL 703

Query: 550  ATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPG 609
            ATNIAETSLTIDGI YV+DPGF KIK+YNPRT  ESLQV PISKASANQRAGR GRTGPG
Sbjct: 704  ATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPG 763

Query: 610  MCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEA 669
            MCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E LL+A
Sbjct: 764  MCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKA 823

Query: 670  LELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNS 729
            LELL+         ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS+GNS
Sbjct: 824  LELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNS 883

Query: 730  IFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRA 789
            IFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRSMKRA
Sbjct: 884  IFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRA 943

Query: 790  RDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHI 849
            RDIRDQL+GLLERVEIELTSN NDLD+IKKTIISG+FPH+ KLQKNGSY+T K PQTVHI
Sbjct: 944  RDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHI 1003

Query: 850  HPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMP 878
            HP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS +KMP
Sbjct: 1004 HPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSSKKMP 1061

[Close]

BLAST of Sed0024832 vs. NCBI nr
Match: XP_011660328.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus] >KGN63716.1 hypothetical protein Csa_013602 [Cucumis sativus])

HSP 1 Score: 1369.0 bits (3542), Expect = 0.0e+00
Identity = 727/912 (79.71%), Postives = 797/912 (87.39%), Query Frame = 0


Query: 6    REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
            R+VKRR+ +SS  D+ SESEE+R L DQ +REQLE NIR+RDAA TKK      Q L+ K
Sbjct: 151  RQVKRRQRASSSEDESSESEEER-LRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210

Query: 66   DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
              +EE  IRRS+A LE  NDG+  LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 211  --EEEEAIRRSEA-LE--NDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 270

Query: 126  LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
            LT++E+ EL+YKKEIY+ LVK +T+EADDINEYRMPE YDQ G V+QDKRFAV A+Q+  
Sbjct: 271  LTDAEYRELKYKKEIYE-LVKKRTDEADDINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330

Query: 186  DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
            DS  A+      EQ  WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM G
Sbjct: 331  DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEG 390

Query: 246  DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
            DEF++E  T+SL+ KSKA+SA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391  DEFVDERQTESLE-KSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450

Query: 306  KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
            KTTQIPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451  KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510

Query: 366  DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
            DKTVLKYMTDGMLLREFL EPDLASYS +MVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511  DKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570

Query: 426  LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
            LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+  +L        
Sbjct: 571  LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630

Query: 486  ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
                     QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP GAR
Sbjct: 631  GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPDGAR 690

Query: 546  KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
            KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT  E+LQV PISKASANQRAGR GR
Sbjct: 691  KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 750

Query: 606  TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
            TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E 
Sbjct: 751  TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810

Query: 666  LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
            LL+ALELL+         ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 811  LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 870

Query: 726  VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
            +GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 871  IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 930

Query: 786  MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
            MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISG+FPH+AKLQKNGSY+T K PQ
Sbjct: 931  MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSAKLQKNGSYRTVKHPQ 990

Query: 846  TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
            TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS 
Sbjct: 991  TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1049

[Close]

BLAST of Sed0024832 vs. NCBI nr
Match: XP_008453258.1 (PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo] >XP_008453259.1 PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo])

HSP 1 Score: 1365.9 bits (3534), Expect = 0.0e+00
Identity = 727/912 (79.71%), Postives = 796/912 (87.28%), Query Frame = 0


Query: 6    REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
            R+VKRR  +SS  DD SESEE+R L DQ +REQLE NIR+RDAA TKK      Q L+ K
Sbjct: 151  RQVKRR--ASSSEDDSSESEEER-LRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210

Query: 66   DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
              +EE  IRRS+A LE  N+G+  LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 211  --EEEEAIRRSEA-LE--NNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 270

Query: 126  LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
            LT++E+ ELRYKKEIY+ LVK +T+EADD+NEYRMPE YDQ G V+QDKRFAV A+Q+  
Sbjct: 271  LTDAEYRELRYKKEIYE-LVKKRTDEADDVNEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330

Query: 186  DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
            DS  A+      EQ  WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM G
Sbjct: 331  DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEG 390

Query: 246  DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
            DEF++E  T+SL+ KSKA+SA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391  DEFVDERQTESLE-KSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450

Query: 306  KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
            KTTQIPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451  KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510

Query: 366  DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
            DKTVLKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511  DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570

Query: 426  LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
            LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+  +L        
Sbjct: 571  LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630

Query: 486  ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
                     QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP+GAR
Sbjct: 631  GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGAR 690

Query: 546  KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
            KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT  E+LQV PISKASANQRAGR GR
Sbjct: 691  KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 750

Query: 606  TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
            TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E 
Sbjct: 751  TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810

Query: 666  LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
            LL+ALELL+         ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 811  LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 870

Query: 726  VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
            +GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETN+STQWCYENYIQVRS
Sbjct: 871  IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNFSTQWCYENYIQVRS 930

Query: 786  MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
            MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 931  MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTVKHPQ 990

Query: 846  TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
            TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS 
Sbjct: 991  TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1047

[Close]

BLAST of Sed0024832 vs. NCBI nr
Match: KAG6587574.1 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 729/909 (80.20%), Postives = 790/909 (86.91%), Query Frame = 0


Query: 6    REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
            R+VKRR  +SS  DDGSESEE+R   DQ +REQLE NIR+RDAA TKK      Q L+ K
Sbjct: 233  RQVKRR--TSSSEDDGSESEEER-QRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 292

Query: 66   DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
              +EE  IRRSKA LE  NDG   LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF GVK
Sbjct: 293  --EEEEAIRRSKA-LE--NDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDGVK 352

Query: 126  LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
            LTE E+ ELRYKKEIY+ LVK +T+EAD+INEYRMPE YDQ G V+QDKRFAV A+Q+  
Sbjct: 353  LTEVEYRELRYKKEIYE-LVKKRTDEADEINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 412

Query: 186  DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
            DS  A+      EQ  WE+HQ+ K +MKFGSKNK+QA  DDYQFVFEDQIEFIKASVM G
Sbjct: 413  DSGAADKMNPFAEQEAWEDHQIGKASMKFGSKNKKQA--DDYQFVFEDQIEFIKASVMEG 472

Query: 246  DEFINETQ--SLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
            DEF++E Q  SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 473  DEFVDEHQIESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 532

Query: 306  KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
            KTTQIPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 533  KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 592

Query: 366  DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
            DKT+LKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 593  DKTILKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 652

Query: 426  LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
            LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+  +L        
Sbjct: 653  LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 712

Query: 486  ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
                     QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTPIGAR
Sbjct: 713  GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 772

Query: 546  KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
            KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT  ESLQV PISKASANQRAGR GR
Sbjct: 773  KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGR 832

Query: 606  TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
            TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E 
Sbjct: 833  TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 892

Query: 666  LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
            LL+ALELL+         ELTK+GRRMAEFP+DPMLSKM+VASEK KCS+E ISIAAMLS
Sbjct: 893  LLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLS 952

Query: 726  VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
            +GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 953  IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 1012

Query: 786  MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
            MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 1013 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 1072

Query: 846  TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 872
            TVHIHP SGL QV PRWA+YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLSQ
Sbjct: 1073 TVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQ 1125

[Close]

BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match: Q8VY00 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1)

HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 628/909 (69.09%), Postives = 742/909 (81.63%), Query Frame = 0


Query: 10   RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
            RR++S    DDGSESEE+R + DQ +RE+LE +++ RD ART+K      Q L+ K+ +E
Sbjct: 152  RRKVSEE--DDGSESEEER-VRDQKEREELEQHLKDRDTARTRK---LTEQTLSKKEKEE 211

Query: 70   EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
               +RR+ A LE   D ++ LRKVSRQEYLKKREQKK++E+RD+IED+ +LF G KLTE+
Sbjct: 212  --AVRRANA-LE--KDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTET 271

Query: 130  EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRTDSST 189
            E  E RYKKE+YD LVK +T + D++ EYR+P+ YDQ G VDQ+KRF+V   + R   ST
Sbjct: 272  ELREFRYKKELYD-LVKKRTQDEDNVEEYRIPDAYDQEGGVDQEKRFSVAVQRYRDLDST 331

Query: 190  AN-----EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFIN 249
                   EQ  WE+HQ+ K T+KFG+KNK+  + DDYQFVFEDQI FIK SVM G+   N
Sbjct: 332  EKMNPFAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGE---N 391

Query: 250  ETQSLDHKSKA-----KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKT 309
               ++D K K+     K+A+E+LQE R++LPIY YRDQLL+A+ ++QV+VIVG+TGSGKT
Sbjct: 392  YEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKT 451

Query: 310  TQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDK 369
            TQIPQYLHE        VGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDK
Sbjct: 452  TQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDK 511

Query: 370  TVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLI 429
            TVLKYMTDGMLLRE L EPDLASYS ++VDEAHERTLSTD+LFGLVKDIARFRPDLKLLI
Sbjct: 512  TVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLI 571

Query: 430  SSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL---------- 489
            SSAT+DAEKFSDYFD+APIF  PGRRYPVEI++T APEADY+DAA+   L          
Sbjct: 572  SSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGD 631

Query: 490  -------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKV 549
                   QE    AEEILKHR RGLGTKI ELIICP+YANLP+ELQAKIFEPTP GARKV
Sbjct: 632  ILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKV 691

Query: 550  VLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTG 609
            VLATNIAETSLTIDGI YVVDPGF K+K+YNPRT  ESL + PISKASA QRAGR GRT 
Sbjct: 692  VLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTS 751

Query: 610  PGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLL 669
            PG C+RLYTAF+Y N++E+N VPE+QRTNLA VVL LK+LGIH+L+NFDFMD PP E L+
Sbjct: 752  PGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALV 811

Query: 670  EALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVG 729
            ++LELL          ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAAMLS+G
Sbjct: 812  KSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIG 871

Query: 730  NSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMK 789
             SIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVY+SW+ETN+STQWCYENYIQVRSMK
Sbjct: 872  GSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMK 931

Query: 790  RARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTV 849
            RARDIRDQL+GLLERVEI+++SN N+LDS++K+I++GFFPH AKLQKNGSY+T K PQTV
Sbjct: 932  RARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTV 991

Query: 850  HIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRK 874
            HIHP SGL QV PRW +YHELV TSKEYMRQ+TELKPEWLIE+APH+YQLKDVED + +K
Sbjct: 992  HIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1043

[Close]

BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match: F4IJV4 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsis thaliana OX=3702 GN=MEE29 PE=2 SV=1)

HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 618/913 (67.69%), Postives = 718/913 (78.64%), Query Frame = 0


Query: 4    IAREVKR--RRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQN 63
            I RE KR  RR  S   DDG+ESEE+R L DQ +RE+LE ++R+RD ART+    K ++ 
Sbjct: 143  IVREDKRNVRRKVSEDEDDGTESEEER-LRDQREREELEQHLRERDTARTR----KLTEP 202

Query: 64   LTDKDPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLF 123
               K  QEE  +RR  A        +  LRK S QEY+KKR+QKK+ E++DDIED+ +LF
Sbjct: 203  KMSKKEQEE-FVRRDSA---VDKGDIESLRKFSWQEYMKKRKQKKVLELKDDIEDEPYLF 262

Query: 124  QGVKLTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYD-QGIVDQDKRFAVRAV 183
               KLTE E  E RYK+EIY+ L+K  T E D++ EYRMP+ YD QG VDQ+KRFAV +V
Sbjct: 263  GDEKLTEREIREFRYKREIYE-LIKKSTQEEDNVGEYRMPDAYDQQGSVDQEKRFAV-SV 322

Query: 184  QQRTDSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKAS 243
            Q+  D  +A       EQ  WE+HQ+    +KFG+KNK  +  D+Y+FVFEDQI+FIKAS
Sbjct: 323  QRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKEVS--DNYEFVFEDQIDFIKAS 382

Query: 244  VMGGDEFINETQSLDHKSKA-KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGET 303
            V+ GD + +E  +   +  A KSA   LQE+RK LPIY YRDQLL A+ D+QV++IVGET
Sbjct: 383  VLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGET 442

Query: 304  GSGKTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFED 363
            GSGKTTQIPQYLHE        VGCTQPRRVAAMS+A+RV+QE+G KLGHEVGYSIRFED
Sbjct: 443  GSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFED 502

Query: 364  CTSDKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPD 423
            CTS+KT+LKYMTDGMLLRE L EPDL SYS I+VDEAHERTL TD+LFGLVKDIAR RPD
Sbjct: 503  CTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPD 562

Query: 424  LKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL----- 483
            LKLLISSAT+DAEKFSD+FD APIFR PGRRYPV+I FT APEADY+DAA++  L     
Sbjct: 563  LKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVK 622

Query: 484  ------------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPI 543
                        QE     EE LKH+ RGLGTKI ELIICP+YANLP+ELQAKIFEPTP 
Sbjct: 623  EPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPE 682

Query: 544  GARKVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGR 603
            GARKVVLATNIAETSLTIDGI YVVDPGF K+K+YNPRT  ESL V PISKASA QR GR
Sbjct: 683  GARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGR 742

Query: 604  CGRTGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPP 663
             GRT PG C+RLYTAF+YYN++EDN VPEIQRTNLA VVL LK+LGIH L+NFDFMD PP
Sbjct: 743  AGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPP 802

Query: 664  VETLLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAA 723
             E L+++LELL          ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAA
Sbjct: 803  SEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAA 862

Query: 724  MLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQ 783
            MLS+G SIFYRPKDKQVHADNA  NFH GNVGDHIA +K+YNSW+ETNYSTQWCYENYIQ
Sbjct: 863  MLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQ 922

Query: 784  VRSMKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAK 843
            VRSMKRARDIRDQL+GLLERVEI+++SN N+LDSI+K+I++GFFPH AKLQKNGSY+T K
Sbjct: 923  VRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVK 982

Query: 844  SPQTVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVED 873
             PQTVHIHP SGL QV PRW +YH+LV TSKEYMRQ+TELKPEWLIEIAPH+YQLKDVED
Sbjct: 983  HPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVED 1042

[Close]

BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match: F4JMJ3 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsis thaliana OX=3702 GN=At4g16680 PE=2 SV=2)

HSP 1 Score: 914.1 bits (2361), Expect = 1.2e-264
Identity = 493/863 (57.13%), Postives = 616/863 (71.38%), Query Frame = 0


Query: 64  DKDPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQG 123
           +++ ++E   + S      S+D +  LR+VSR++YL  RE KK+EE+RD+ +DD      
Sbjct: 57  EEEEEDENKTKLSSWEKVLSSDEILRLREVSRRKYLTDRENKKVEELRDERKDD------ 116

Query: 124 VKLTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAV---RA 183
                                        DD+  YR P+ YDQ G +DQ KRF V   R 
Sbjct: 117 -----------------------------DDVEGYRFPDAYDQEGCIDQKKRFDVAKERY 176

Query: 184 VQQRTDSSTANEQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGD 243
            ++R       EQ  WE+HQ +K  ++FG+K+K+Q   D Y+FVF+D   F++ S     
Sbjct: 177 CERRRSGRVVTEQEAWEDHQAQKARVRFGAKDKKQVV-DGYEFVFDDLTGFVEES----- 236

Query: 244 EFINETQSLDHKS-KAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKT 303
              +E ++  H+   +K+A EK +E R+ LPI+ YR++LL+ I + QV+VIVGETGSGKT
Sbjct: 237 ---SEAETGKHRGCYSKTAAEKAREGREFLPIHGYREELLKLIEENQVLVIVGETGSGKT 296

Query: 304 TQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDK 363
           TQIPQYL E        +GCTQPRRVAAMS+ASRV+QE+GVKLGHEVGYSIRFEDCTS+K
Sbjct: 297 TQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEK 356

Query: 364 TVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLI 423
           TV+KYMTDGMLLRE L+EP L SYS I++DEAHERTLSTD+LF LVKD+A+ RPDL+L+I
Sbjct: 357 TVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLII 416

Query: 424 SSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAM--------SQSLQE 483
           SSATL+A+KFS+YFDSA I+ IPGRRYPVE  F K PE DYL+  +        ++++ +
Sbjct: 417 SSATLEAKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAIGD 476

Query: 484 IYWY---AEEI------LKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKV 543
           I  +    EEI      LK R   LGTK +E+IICP+Y+NLPT LQAK+FEP P G RKV
Sbjct: 477 ILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKV 536

Query: 544 VLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTG 603
           VLATNIAETSLTIDG+ YV+DPG+ KI +YNPRT  ESL V PISKASA QRAGR GRTG
Sbjct: 537 VLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTG 596

Query: 604 PGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLL 663
           PG CFRLY       ++E   +PEIQR NLA VVL LK+LGI ++ NFDFMD PP   LL
Sbjct: 597 PGKCFRLYN----IKDLEPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALL 656

Query: 664 EALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVG 723
           +ALELL+         E+TK+G RM EFPVDPMLSKMIV SEK+KCS+E I+IAAMLSVG
Sbjct: 657 KALELLYALGALDEIGEITKVGERMVEFPVDPMLSKMIVGSEKYKCSKEIITIAAMLSVG 716

Query: 724 NSIFYRPKDKQVHADNARMNFH--TGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 783
           NS+FYRPK++QV AD ARM+F+  T NVGDHIAL++VYNSW+E NYSTQWC E +IQ +S
Sbjct: 717 NSVFYRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKEENYSTQWCCEKFIQSKS 776

Query: 784 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 843
           MKRARDIRDQL GLL ++ +ELTSN NDLD+IKK I++GFFPH+AKLQKNGSY+  K PQ
Sbjct: 777 MKRARDIRDQLLGLLNKIGVELTSNPNDLDAIKKAILAGFFPHSAKLQKNGSYRRVKEPQ 836

Query: 844 TVHIHPGSGLPQVRP-RWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLS 883
           TV++HP SGL    P +W +YHELV T+KEYMR  TE+KPEWLIEIAPH+Y+LKD+ED  
Sbjct: 837 TVYVHPNSGLFGASPSKWLVYHELVLTTKEYMRHTTEMKPEWLIEIAPHYYKLKDIEDTR 871

[Close]

BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match: Q54MH3 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum OX=44689 GN=dhx16 PE=3 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 7.3e-257
Identity = 485/901 (53.83%), Postives = 642/901 (71.25%), Query Frame = 0


Query: 19   DDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQEEALIRRSKA 78
            ++G E E +R   +Q + ++L   I++RD   TKK        + D    +E++ R+++ 
Sbjct: 223  NNGEEDEYER---EQREVKELSDRIKKRDEKSTKK-------KIVDDSETKESIERKNRL 282

Query: 79   NLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTESEHGELRYKK 138
                 N+ +   R  SR++YL   EQK++  ++ +IE++  LF+  KLTE E  +   KK
Sbjct: 283  ---EQNEQLETERTKSRRKYLVGEEQKRLILLKREIEEEYELFKDQKLTEQEIKDFEKKK 342

Query: 139  EIYDVLVK--NQTNEADDINEYRMP-EPYDQGIVDQDKRFAVRAVQQRTDSSTAN----E 198
            ++Y++  +  N++ ++DD   Y++P E  D+  + +         ++  DSS+++    E
Sbjct: 343  KLYELASQRINESQQSDDY--YQLPSEIKDKDSLLKSSYINDNKNKKGNDSSSSSSYNPE 402

Query: 199  QHKWEEHQLRKGTMKFGSKNKRQASG--DDYQFVFEDQIEFIKASVM----GGDEFINET 258
            Q +WE+++++    +    +     G  ++Y++VFEDQIEFIK  V+     GD  +   
Sbjct: 403  QKEWEQNRMKSAISENRGLSTANIGGGNEEYEYVFEDQIEFIKEEVLKQGQKGDGVMILK 462

Query: 259  QSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQIPQYL 318
               D  ++AK     +QE RK+LP+YPYR+QL+ A+ +YQV++IVGETGSGKTTQIPQYL
Sbjct: 463  PGDDGSAQAKMT---IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYL 522

Query: 319  HE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMT 378
            HE        +GCTQPRRVAAMS+A+RV++E+G KLG+EVGYSIRFEDCTS KTVL+YMT
Sbjct: 523  HEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMT 582

Query: 379  DGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDA 438
            DGML+REFL  PDLASYS +++DEAHERTL TD+LFGL+KDI RFRPDLKLLISSAT+DA
Sbjct: 583  DGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDA 642

Query: 439  EKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL----------------- 498
            E+FSDYFD AP F IPGR+Y V  H+T+APEADYLDAA+   L                 
Sbjct: 643  ERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTG 702

Query: 499  QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVLATNIA 558
            QE    A E+L+ RTRGLGTKI ELII  +Y+ LPT+LQAKIFEPTP  ARKVVLATNIA
Sbjct: 703  QEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIA 762

Query: 559  ETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPGMCFRL 618
            ETSLTIDGI YV+DPGF K K +NPRT  ESL + P+S+ASANQR GR GR  PG CFRL
Sbjct: 763  ETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRL 822

Query: 619  YTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEALELLH 678
            +TA+++ NE+E+N +PEIQRTNL +VVL+LK++GI++L+NFDFMD PP +TL+ ALE L+
Sbjct: 823  FTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLY 882

Query: 679  ---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNSIFYRP 738
                     +LTKLGR+MAEFPVDP LSKMI+ASEK+KCSEE ++I AMLSVGN+IFYRP
Sbjct: 883  ALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRP 942

Query: 739  KDKQVHADNAR-MNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRARDIR 798
            KDK   AD AR + FH    GDH+ LM V+N WRE+ Y+ QWC+EN+IQ RSMKRA+D+R
Sbjct: 943  KDKAFAADAARKLFFHP--QGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVR 1002

Query: 799  DQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGS 858
            DQL+ LLERVEI L SN +D DSI+K I SGFF ++AKL+K+G ++T K  Q+V IHP S
Sbjct: 1003 DQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSS 1062

Query: 859  GLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMPRGQG 872
             L Q  P+W +YHELV T+KE+MRQI E++  WL EIAPH Y+ KDV D   +K+P+  G
Sbjct: 1063 CLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVND--NQKLPKNIG 1101

[Close]

BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match: Q767K6 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 GN=DHX16 PE=3 SV=1)

HSP 1 Score: 884.8 bits (2285), Expect = 8.1e-256
Identity = 476/896 (53.12%), Postives = 636/896 (70.98%), Query Frame = 0


Query: 19   DDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQEEALIRRSKA 78
            +D  E  E+  L D  +R+     +RQRD  RT     +N    +DK   EEA  +R K 
Sbjct: 165  EDEWERTERERLQDLEERDAFAERVRQRDKDRT-----RNVLERSDKKAYEEAQ-KRLKM 224

Query: 79   NLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTESEHGELRYKK 138
              E+    V  LRK SR+EYL KRE++K+E++  ++ D+  LF  V+L+  E  EL+YK+
Sbjct: 225  AEEDRKAMVPELRKKSRREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKR 284

Query: 139  EIYDVL----VKNQTNEADDINEYRMPEPYDQGIVDQDKRFAVRAVQQRTDSSTA--NEQ 198
             + D+        +  + +  N Y MPE        + +    RAV    + S A   EQ
Sbjct: 285  RVRDLAREYRAAGEQEKLEATNRYHMPE--------ETRGQPTRAVDLVEEESGAPGEEQ 344

Query: 199  HKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQ--IEFIKASVMGGDEFINETQSLDH 258
             +WEE +L   ++KFG+++   +    YQ V E++  IEF++A+ + GDE   E  +   
Sbjct: 345  RRWEEARLGAASLKFGARD-AASQEPKYQLVLEEEETIEFVRATQLQGDE---EPAAPPA 404

Query: 259  KSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQIPQYLHEVG- 318
             ++A+   E +Q  R++LP++P+R++LL A+ ++Q+++I GETGSGKTTQIPQYL E G 
Sbjct: 405  PTQAQQ-KESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGY 464

Query: 319  --------CTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGML 378
                    CTQPRRVAAMS+A+RV++E+GVKLG+EVGYSIRFEDCTS++TVL+YMTDGML
Sbjct: 465  TQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGML 524

Query: 379  LREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFS 438
            LREFL EPDLASYS +MVDEAHERTL TD+LFGL+KD+ARFRP+LK+L++SATLD  +FS
Sbjct: 525  LREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFS 584

Query: 439  DYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-----------------QEIY 498
             +FD AP+FRIPGRR+PV+I +TKAPEADYL+A +   L                 QE  
Sbjct: 585  TFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEI 644

Query: 499  WYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVLATNIAETSL 558
              A E+L+ R R LG+KI EL++ P+YANLP+++QA+IF+PTP GARKVV+ATNIAETSL
Sbjct: 645  EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSL 704

Query: 559  TIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPGMCFRLYTAF 618
            TI+GI YV+DPGF K K+YNPRT  ESL V P SKASANQRAGR GR   G CFRLYTA+
Sbjct: 705  TIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAW 764

Query: 619  SYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEALELLH---- 678
            +Y +E+E+  VPEIQRT+L +VVL+LK+LGIH+L++FDF+D PP ETLL ALE L+    
Sbjct: 765  AYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGA 824

Query: 679  -----ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNSIFYRPKDKQ 738
                 ELT  GR+MAE PVDPMLSKMI+ASEK+ CSEE +++AAMLSV NSIFYRPKDK 
Sbjct: 825  LNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKV 884

Query: 739  VHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLKG 798
            VHADNAR+NF     GDH+ L+ VY  W E+ YS+QWCYEN++Q RSM+RARD+R+QL+G
Sbjct: 885  VHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEG 944

Query: 799  LLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGSGLPQV 858
            LLERVE+ L+S   D   ++K I +G+F H A+L ++G Y+T K  QTV IHP S L + 
Sbjct: 945  LLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEE 1004

Query: 859  RPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMPRGQGR 872
            +PRW +YHELV T+KE+MRQ+ E++  WL+E+APH+Y+ K++ED   +KMP+  G+
Sbjct: 1005 QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGK 1039

[Close]

BLAST of Sed0024832 vs. ExPASy TrEMBL
Match: A0A6J1BZI7 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007026 PE=4 SV=1)

HSP 1 Score: 1372.1 bits (3550), Expect = 0.0e+00
Identity = 729/911 (80.02%), Postives = 794/911 (87.16%), Query Frame = 0


Query: 10   RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
            RRR +SS  DDG ESEE+R L DQ +REQLE NIR+RDAA T+K        L+ K  +E
Sbjct: 164  RRRTTSSEDDDGYESEEER-LRDQREREQLEQNIRERDAAGTRK---LTEPKLSRK--EE 223

Query: 70   EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
            +  IRRSKA LE  NDG+  LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVKLTE+
Sbjct: 224  DEAIRRSKA-LE--NDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEA 283

Query: 130  EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRTDSST 189
            E+ ELRYKKEIY+ LVK +T+EADDI+EYRMPE YDQ G V+QDKRFAV A+Q+  DS T
Sbjct: 284  EYRELRYKKEIYE-LVKKRTDEADDIDEYRMPEAYDQEGGVNQDKRFAV-AMQRYRDSGT 343

Query: 190  AN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFI 249
            A+      EQ  WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM GDEF+
Sbjct: 344  ADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEGDEFV 403

Query: 250  N--ETQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQ 309
            +  ET+SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSGKTTQ
Sbjct: 404  DERETESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQ 463

Query: 310  IPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTV 369
            IPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTSDKTV
Sbjct: 464  IPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTV 523

Query: 370  LKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS 429
            LKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS
Sbjct: 524  LKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS 583

Query: 430  ATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL------------ 489
            ATLDAEKFSDYFDSAPIF+IPGRRYPVEIHFTKAPEADYLDAA+  +L            
Sbjct: 584  ATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKPPGDIL 643

Query: 490  -----QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVL 549
                 QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP+GARKVVL
Sbjct: 644  VFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGARKVVL 703

Query: 550  ATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPG 609
            ATNIAETSLTIDGI YV+DPGF KIK+YNPRT  ESLQV PISKASANQRAGR GRTGPG
Sbjct: 704  ATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPG 763

Query: 610  MCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEA 669
            MCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E LL+A
Sbjct: 764  MCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKA 823

Query: 670  LELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNS 729
            LELL+         ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS+GNS
Sbjct: 824  LELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNS 883

Query: 730  IFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRA 789
            IFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRSMKRA
Sbjct: 884  IFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRA 943

Query: 790  RDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHI 849
            RDIRDQL+GLLERVEIELTSN NDLD+IKKTIISG+FPH+ KLQKNGSY+T K PQTVHI
Sbjct: 944  RDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHI 1003

Query: 850  HPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMP 878
            HP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS +KMP
Sbjct: 1004 HPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSSKKMP 1061

[Close]

BLAST of Sed0024832 vs. ExPASy TrEMBL
Match: A0A0A0LUM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1)

HSP 1 Score: 1369.0 bits (3542), Expect = 0.0e+00
Identity = 727/912 (79.71%), Postives = 797/912 (87.39%), Query Frame = 0


Query: 6    REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
            R+VKRR+ +SS  D+ SESEE+R L DQ +REQLE NIR+RDAA TKK      Q L+ K
Sbjct: 151  RQVKRRQRASSSEDESSESEEER-LRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210

Query: 66   DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
              +EE  IRRS+A LE  NDG+  LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 211  --EEEEAIRRSEA-LE--NDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 270

Query: 126  LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
            LT++E+ EL+YKKEIY+ LVK +T+EADDINEYRMPE YDQ G V+QDKRFAV A+Q+  
Sbjct: 271  LTDAEYRELKYKKEIYE-LVKKRTDEADDINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330

Query: 186  DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
            DS  A+      EQ  WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM G
Sbjct: 331  DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEG 390

Query: 246  DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
            DEF++E  T+SL+ KSKA+SA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391  DEFVDERQTESLE-KSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450

Query: 306  KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
            KTTQIPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451  KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510

Query: 366  DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
            DKTVLKYMTDGMLLREFL EPDLASYS +MVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511  DKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570

Query: 426  LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
            LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+  +L        
Sbjct: 571  LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630

Query: 486  ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
                     QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP GAR
Sbjct: 631  GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPDGAR 690

Query: 546  KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
            KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT  E+LQV PISKASANQRAGR GR
Sbjct: 691  KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 750

Query: 606  TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
            TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E 
Sbjct: 751  TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810

Query: 666  LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
            LL+ALELL+         ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 811  LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 870

Query: 726  VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
            +GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 871  IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 930

Query: 786  MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
            MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISG+FPH+AKLQKNGSY+T K PQ
Sbjct: 931  MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSAKLQKNGSYRTVKHPQ 990

Query: 846  TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
            TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS 
Sbjct: 991  TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1049

[Close]

BLAST of Sed0024832 vs. ExPASy TrEMBL
Match: A0A1S3BVU3 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo OX=3656 GN=LOC103494032 PE=4 SV=1)

HSP 1 Score: 1365.9 bits (3534), Expect = 0.0e+00
Identity = 727/912 (79.71%), Postives = 796/912 (87.28%), Query Frame = 0


Query: 6    REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
            R+VKRR  +SS  DD SESEE+R L DQ +REQLE NIR+RDAA TKK      Q L+ K
Sbjct: 151  RQVKRR--ASSSEDDSSESEEER-LRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210

Query: 66   DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
              +EE  IRRS+A LE  N+G+  LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 211  --EEEEAIRRSEA-LE--NNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 270

Query: 126  LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
            LT++E+ ELRYKKEIY+ LVK +T+EADD+NEYRMPE YDQ G V+QDKRFAV A+Q+  
Sbjct: 271  LTDAEYRELRYKKEIYE-LVKKRTDEADDVNEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330

Query: 186  DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
            DS  A+      EQ  WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM G
Sbjct: 331  DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEG 390

Query: 246  DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
            DEF++E  T+SL+ KSKA+SA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391  DEFVDERQTESLE-KSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450

Query: 306  KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
            KTTQIPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451  KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510

Query: 366  DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
            DKTVLKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511  DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570

Query: 426  LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
            LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+  +L        
Sbjct: 571  LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630

Query: 486  ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
                     QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP+GAR
Sbjct: 631  GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGAR 690

Query: 546  KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
            KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT  E+LQV PISKASANQRAGR GR
Sbjct: 691  KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 750

Query: 606  TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
            TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E 
Sbjct: 751  TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810

Query: 666  LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
            LL+ALELL+         ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 811  LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 870

Query: 726  VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
            +GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETN+STQWCYENYIQVRS
Sbjct: 871  IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNFSTQWCYENYIQVRS 930

Query: 786  MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
            MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 931  MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTVKHPQ 990

Query: 846  TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
            TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS 
Sbjct: 991  TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1047

[Close]

BLAST of Sed0024832 vs. ExPASy TrEMBL
Match: A0A6J1F0A9 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440982 PE=4 SV=1)

HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 729/909 (80.20%), Postives = 790/909 (86.91%), Query Frame = 0


Query: 6    REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
            R+VKRR  +SS  DDGSESEE+R   DQ +REQLE NIR+RDAA TKK      Q L+ K
Sbjct: 151  RQVKRR--TSSSEDDGSESEEER-QRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210

Query: 66   DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
              +EE  IRRSKA LE  NDG   LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF GVK
Sbjct: 211  --EEEEAIRRSKA-LE--NDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDGVK 270

Query: 126  LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
            LTE E+ ELRYKKEIY+ LVK +T+EAD+INEYRMPE YDQ G V+QDKRFAV A+Q+  
Sbjct: 271  LTEVEYRELRYKKEIYE-LVKKRTDEADEINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330

Query: 186  DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
            DS  A+      EQ  WE+HQ+ K +MKFGSKNK+QA  DDYQFVFEDQIEFIKASVM G
Sbjct: 331  DSGAADKMNPFAEQEAWEDHQIGKASMKFGSKNKKQA--DDYQFVFEDQIEFIKASVMEG 390

Query: 246  DEFINETQ--SLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
            DEF++E Q  SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391  DEFVDEHQIESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450

Query: 306  KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
            KTTQIPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451  KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510

Query: 366  DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
            DKT+LKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511  DKTILKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570

Query: 426  LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
            LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+  +L        
Sbjct: 571  LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630

Query: 486  ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
                     QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTPIGAR
Sbjct: 631  GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 690

Query: 546  KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
            KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT  ESLQV PISKASANQRAGR GR
Sbjct: 691  KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGR 750

Query: 606  TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
            TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E 
Sbjct: 751  TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810

Query: 666  LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
            LL+ALELL+         ELTK+GRRMAEFP+DPMLSKM+VASEK KCS+E ISIAAMLS
Sbjct: 811  LLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLS 870

Query: 726  VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
            +GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 871  IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 930

Query: 786  MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
            MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 931  MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 990

Query: 846  TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 872
            TVHIHP SGL QV PRWA+YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLSQ
Sbjct: 991  TVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQ 1043

[Close]

BLAST of Sed0024832 vs. ExPASy TrEMBL
Match: A0A6J1KTQ9 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498124 PE=4 SV=1)

HSP 1 Score: 1357.4 bits (3512), Expect = 0.0e+00
Identity = 727/909 (79.98%), Postives = 788/909 (86.69%), Query Frame = 0


Query: 6    REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
            R+VKRR  +SS  DDGSESEE+R   DQ +REQLE NIR+RDAA TKK      Q L+ K
Sbjct: 151  RQVKRR--TSSSEDDGSESEEER-QRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210

Query: 66   DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
              +EE  IRRSKA LE  NDG   LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF GVK
Sbjct: 211  --EEEEAIRRSKA-LE--NDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDGVK 270

Query: 126  LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
            LTE E+ ELRYKKEIY+ LVK + +EAD+INEYRMPE YDQ G V+QDKRFAV A+Q+  
Sbjct: 271  LTEVEYRELRYKKEIYE-LVKKRIDEADEINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330

Query: 186  DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
            DS  A+      EQ  WEEHQ+ K +MKFGSKNK+QA  DDYQFVFEDQIEFIKASVM G
Sbjct: 331  DSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQA--DDYQFVFEDQIEFIKASVMEG 390

Query: 246  DEFINETQ--SLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
            DEF++E Q  SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391  DEFVDEHQIESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450

Query: 306  KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
            KTTQIPQYLHE        VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451  KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510

Query: 366  DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
            DKT+LKYMTDGMLLREFL EPDLA YS IMVDEAHERTLSTDVLFGLVKDIARFRP+LKL
Sbjct: 511  DKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLFGLVKDIARFRPELKL 570

Query: 426  LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
            LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+  +L        
Sbjct: 571  LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630

Query: 486  ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
                     QE    AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTPIGAR
Sbjct: 631  GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 690

Query: 546  KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
            KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT  ESLQV PISKASANQRAGR GR
Sbjct: 691  KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGR 750

Query: 606  TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
            TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E 
Sbjct: 751  TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810

Query: 666  LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
            LL+ALELL+         ELTK+GRRMAEFP+DPMLSKM+VASEK KCS+E ISIAAMLS
Sbjct: 811  LLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLS 870

Query: 726  VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
            +GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 871  IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 930

Query: 786  MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
            MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 931  MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 990

Query: 846  TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 872
            TVHIHP SGL QV PRWA+YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLSQ
Sbjct: 991  TVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQ 1043

[Close]

BLAST of Sed0024832 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 628/909 (69.09%), Postives = 742/909 (81.63%), Query Frame = 0


Query: 10   RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
            RR++S    DDGSESEE+R + DQ +RE+LE +++ RD ART+K      Q L+ K+ +E
Sbjct: 152  RRKVSEE--DDGSESEEER-VRDQKEREELEQHLKDRDTARTRK---LTEQTLSKKEKEE 211

Query: 70   EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
               +RR+ A LE   D ++ LRKVSRQEYLKKREQKK++E+RD+IED+ +LF G KLTE+
Sbjct: 212  --AVRRANA-LE--KDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTET 271

Query: 130  EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRTDSST 189
            E  E RYKKE+YD LVK +T + D++ EYR+P+ YDQ G VDQ+KRF+V   + R   ST
Sbjct: 272  ELREFRYKKELYD-LVKKRTQDEDNVEEYRIPDAYDQEGGVDQEKRFSVAVQRYRDLDST 331

Query: 190  AN-----EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFIN 249
                   EQ  WE+HQ+ K T+KFG+KNK+  + DDYQFVFEDQI FIK SVM G+   N
Sbjct: 332  EKMNPFAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGE---N 391

Query: 250  ETQSLDHKSKA-----KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKT 309
               ++D K K+     K+A+E+LQE R++LPIY YRDQLL+A+ ++QV+VIVG+TGSGKT
Sbjct: 392  YEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKT 451

Query: 310  TQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDK 369
            TQIPQYLHE        VGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDK
Sbjct: 452  TQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDK 511

Query: 370  TVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLI 429
            TVLKYMTDGMLLRE L EPDLASYS ++VDEAHERTLSTD+LFGLVKDIARFRPDLKLLI
Sbjct: 512  TVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLI 571

Query: 430  SSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL---------- 489
            SSAT+DAEKFSDYFD+APIF  PGRRYPVEI++T APEADY+DAA+   L          
Sbjct: 572  SSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGD 631

Query: 490  -------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKV 549
                   QE    AEEILKHR RGLGTKI ELIICP+YANLP+ELQAKIFEPTP GARKV
Sbjct: 632  ILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKV 691

Query: 550  VLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTG 609
            VLATNIAETSLTIDGI YVVDPGF K+K+YNPRT  ESL + PISKASA QRAGR GRT 
Sbjct: 692  VLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTS 751

Query: 610  PGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLL 669
            PG C+RLYTAF+Y N++E+N VPE+QRTNLA VVL LK+LGIH+L+NFDFMD PP E L+
Sbjct: 752  PGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALV 811

Query: 670  EALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVG 729
            ++LELL          ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAAMLS+G
Sbjct: 812  KSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIG 871

Query: 730  NSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMK 789
             SIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVY+SW+ETN+STQWCYENYIQVRSMK
Sbjct: 872  GSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMK 931

Query: 790  RARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTV 849
            RARDIRDQL+GLLERVEI+++SN N+LDS++K+I++GFFPH AKLQKNGSY+T K PQTV
Sbjct: 932  RARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTV 991

Query: 850  HIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRK 874
            HIHP SGL QV PRW +YHELV TSKEYMRQ+TELKPEWLIE+APH+YQLKDVED + +K
Sbjct: 992  HIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1043

[Close]

BLAST of Sed0024832 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 622/908 (68.50%), Postives = 734/908 (80.84%), Query Frame = 0


Query: 10   RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
            RR++S    DDGSESEE+R + DQ +RE+LE +++ RD ART+K      Q L+ K+ +E
Sbjct: 152  RRKVSEE--DDGSESEEER-VRDQKEREELEQHLKDRDTARTRK---LTEQTLSKKEKEE 211

Query: 70   EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
               +RR+ A LE   D ++ LRKVSRQEYLKKREQKK++E+RD+IED+ +LF G KLTE+
Sbjct: 212  --AVRRANA-LE--KDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTET 271

Query: 130  EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQGIVDQDKRFAVRAVQQRTDSSTA 189
            E  E RYKKE+YD LVK +T + D++ E         G VDQ+KRF+V   + R   ST 
Sbjct: 272  ELREFRYKKELYD-LVKKRTQDEDNVEE---------GGVDQEKRFSVAVQRYRDLDSTE 331

Query: 190  N-----EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFINE 249
                  EQ  WE+HQ+ K T+KFG+KNK+  + DDYQFVFEDQI FIK SVM G+   N 
Sbjct: 332  KMNPFAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGE---NY 391

Query: 250  TQSLDHKSKA-----KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTT 309
              ++D K K+     K+A+E+LQE R++LPIY YRDQLL+A+ ++QV+VIVG+TGSGKTT
Sbjct: 392  EDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTT 451

Query: 310  QIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKT 369
            QIPQYLHE        VGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDKT
Sbjct: 452  QIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKT 511

Query: 370  VLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLIS 429
            VLKYMTDGMLLRE L EPDLASYS ++VDEAHERTLSTD+LFGLVKDIARFRPDLKLLIS
Sbjct: 512  VLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLIS 571

Query: 430  SATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL----------- 489
            SAT+DAEKFSDYFD+APIF  PGRRYPVEI++T APEADY+DAA+   L           
Sbjct: 572  SATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDI 631

Query: 490  ------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVV 549
                  QE    AEEILKHR RGLGTKI ELIICP+YANLP+ELQAKIFEPTP GARKVV
Sbjct: 632  LVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVV 691

Query: 550  LATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGP 609
            LATNIAETSLTIDGI YVVDPGF K+K+YNPRT  ESL + PISKASA QRAGR GRT P
Sbjct: 692  LATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSP 751

Query: 610  GMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLE 669
            G C+RLYTAF+Y N++E+N VPE+QRTNLA VVL LK+LGIH+L+NFDFMD PP E L++
Sbjct: 752  GKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVK 811

Query: 670  ALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGN 729
            +LELL          ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAAMLS+G 
Sbjct: 812  SLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGG 871

Query: 730  SIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKR 789
            SIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVY+SW+ETN+STQWCYENYIQVRSMKR
Sbjct: 872  SIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKR 931

Query: 790  ARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVH 849
            ARDIRDQL+GLLERVEI+++SN N+LDS++K+I++GFFPH AKLQKNGSY+T K PQTVH
Sbjct: 932  ARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVH 991

Query: 850  IHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKM 874
            IHP SGL QV PRW +YHELV TSKEYMRQ+TELKPEWLIE+APH+YQLKDVED + +KM
Sbjct: 992  IHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKM 1033

[Close]

BLAST of Sed0024832 vs. TAIR 10
Match: AT2G35340.1 (helicase domain-containing protein )

HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 618/913 (67.69%), Postives = 718/913 (78.64%), Query Frame = 0


Query: 4    IAREVKR--RRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQN 63
            I RE KR  RR  S   DDG+ESEE+R L DQ +RE+LE ++R+RD ART+    K ++ 
Sbjct: 143  IVREDKRNVRRKVSEDEDDGTESEEER-LRDQREREELEQHLRERDTARTR----KLTEP 202

Query: 64   LTDKDPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLF 123
               K  QEE  +RR  A        +  LRK S QEY+KKR+QKK+ E++DDIED+ +LF
Sbjct: 203  KMSKKEQEE-FVRRDSA---VDKGDIESLRKFSWQEYMKKRKQKKVLELKDDIEDEPYLF 262

Query: 124  QGVKLTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYD-QGIVDQDKRFAVRAV 183
               KLTE E  E RYK+EIY+ L+K  T E D++ EYRMP+ YD QG VDQ+KRFAV +V
Sbjct: 263  GDEKLTEREIREFRYKREIYE-LIKKSTQEEDNVGEYRMPDAYDQQGSVDQEKRFAV-SV 322

Query: 184  QQRTDSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKAS 243
            Q+  D  +A       EQ  WE+HQ+    +KFG+KNK  +  D+Y+FVFEDQI+FIKAS
Sbjct: 323  QRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKEVS--DNYEFVFEDQIDFIKAS 382

Query: 244  VMGGDEFINETQSLDHKSKA-KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGET 303
            V+ GD + +E  +   +  A KSA   LQE+RK LPIY YRDQLL A+ D+QV++IVGET
Sbjct: 383  VLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGET 442

Query: 304  GSGKTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFED 363
            GSGKTTQIPQYLHE        VGCTQPRRVAAMS+A+RV+QE+G KLGHEVGYSIRFED
Sbjct: 443  GSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFED 502

Query: 364  CTSDKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPD 423
            CTS+KT+LKYMTDGMLLRE L EPDL SYS I+VDEAHERTL TD+LFGLVKDIAR RPD
Sbjct: 503  CTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPD 562

Query: 424  LKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL----- 483
            LKLLISSAT+DAEKFSD+FD APIFR PGRRYPV+I FT APEADY+DAA++  L     
Sbjct: 563  LKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVK 622

Query: 484  ------------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPI 543
                        QE     EE LKH+ RGLGTKI ELIICP+YANLP+ELQAKIFEPTP 
Sbjct: 623  EPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPE 682

Query: 544  GARKVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGR 603
            GARKVVLATNIAETSLTIDGI YVVDPGF K+K+YNPRT  ESL V PISKASA QR GR
Sbjct: 683  GARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGR 742

Query: 604  CGRTGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPP 663
             GRT PG C+RLYTAF+YYN++EDN VPEIQRTNLA VVL LK+LGIH L+NFDFMD PP
Sbjct: 743  AGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPP 802

Query: 664  VETLLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAA 723
             E L+++LELL          ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAA
Sbjct: 803  SEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAA 862

Query: 724  MLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQ 783
            MLS+G SIFYRPKDKQVHADNA  NFH GNVGDHIA +K+YNSW+ETNYSTQWCYENYIQ
Sbjct: 863  MLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQ 922

Query: 784  VRSMKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAK 843
            VRSMKRARDIRDQL+GLLERVEI+++SN N+LDSI+K+I++GFFPH AKLQKNGSY+T K
Sbjct: 923  VRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVK 982

Query: 844  SPQTVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVED 873
             PQTVHIHP SGL QV PRW +YH+LV TSKEYMRQ+TELKPEWLIEIAPH+YQLKDVED
Sbjct: 983  HPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVED 1042

[Close]

BLAST of Sed0024832 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 671.0 bits (1730), Expect = 1.3e-192
Identity = 336/638 (52.66%), Postives = 452/638 (70.85%), Query Frame = 0


Query: 261  LQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQIPQYLHE--------VGCTQ 320
            +QE+R++LPIY  + +L+QA++D QV+V++GETGSGKTTQ+ QYL E        +GCTQ
Sbjct: 508  IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567

Query: 321  PRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLA 380
            PRRVAAMS+A RV++E G +LG EVGY+IRFEDCT   TV+KYMTDGMLLRE L++ +L+
Sbjct: 568  PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627

Query: 381  SYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFRI 440
             YS IM+DEAHERT+ TDVLFGL+K + + R DL+L+++SATLDAEKFS YF +  IF I
Sbjct: 628  QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687

Query: 441  PGRRYPVEIHFTKAPEADYLDAAMSQSLQ--------EIYWY---AEEI------LKHRT 500
            PGR +PVEI +TK PE DYLDAA+   LQ        +I  +    EEI      L  R 
Sbjct: 688  PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747

Query: 501  RGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGISYVVDP 560
            +GLG  + ELII PVY+ LP+E+Q++IF+P P G RKVV+ATNIAE SLTIDGI YVVDP
Sbjct: 748  KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807

Query: 561  GFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPGMCFRLYTAFSYYNEMEDNVV 620
            GF K   YNP+   ESL + PIS+ASA QRAGR GRTGPG C+RLYT  +Y NEM    +
Sbjct: 808  GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867

Query: 621  PEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEALELLHE---------LTKLG 680
            PEIQR NL    L +K +GI++L++FDFMD P  + L+ A+E L+          LTKLG
Sbjct: 868  PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927

Query: 681  RRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNSIFYRPKDKQVHADNARMNFH 740
            R+MAEFP++P LSKM++AS    CS+E +++ AM+  GN IFYRP++KQ  AD  R  F 
Sbjct: 928  RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 987

Query: 741  TGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLKGLLERVEIELTS 800
                GDH+ L+ VY +W+  N+S  WC+EN+IQ RS++RA+D+R QL  ++++ ++++ +
Sbjct: 988  QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1047

Query: 801  NFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGSGLPQVRPRWAIYHELV 860
               +   I+K I +GFF H A+      Y+T    Q V+IHP S L Q +P W IYH+LV
Sbjct: 1048 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1107

Query: 861  CTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRK 865
             T+KEYMR++T + P+WL+E+AP F+++ D   +S+RK
Sbjct: 1108 MTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRK 1143

[Close]

BLAST of Sed0024832 vs. TAIR 10
Match: AT2G47250.1 (RNA helicase family protein )

HSP 1 Score: 615.9 bits (1587), Expect = 5.0e-176
Identity = 316/686 (46.06%), Postives = 453/686 (66.03%), Query Frame = 0


Query: 231 IKASVMGGDEFINETQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIV 290
           + A+  GG   IN+     +  +    +EK    R+ LP++  +D  L  +N  Q +++V
Sbjct: 32  LAAAAGGGSNLINKWNGKAYSQRYFEILEK----RRDLPVWLQKDDFLNTLNSNQTLILV 91

Query: 291 GETGSGKTTQIPQYLHE--------------VGCTQPRRVAAMSIASRVSQELGVKLGHE 350
           GETGSGKTTQIPQ++ +              VGCTQPRRVAAMS++ RV+ E+ V +G E
Sbjct: 92  GETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEE 151

Query: 351 VGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLV 410
           VGYSIRFEDCTS +T+LKY+TDGMLLRE + +P L  Y  I++DEAHERTL+TDVLFGL+
Sbjct: 152 VGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLL 211

Query: 411 KDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAM 470
           K++ R RPDLKL++ SATL+AEKF +YF  AP+ ++PGR +PVEI +T+ PE DYL+AA+
Sbjct: 212 KEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAI 271

Query: 471 SQSLQ----------EIYWYAEEILKHRTR-------GLGTKIAELIICPVYANLPTELQ 530
              +Q           ++   EE ++   R        LG ++  + + P+Y+ LP  +Q
Sbjct: 272 RTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQ 331

Query: 531 AKIFEPTPI-------GARKVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESL 590
            KIF+P P+         RK+V++TNIAETSLTIDGI YV+DPGF K K YNPR R ESL
Sbjct: 332 QKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESL 391

Query: 591 QVIPISKASANQRAGRCGRTGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKT 650
            V PISKASA+QR+GR GRT PG CFRLYT  S+ N+++    PEI R+NLA+ VL LK 
Sbjct: 392 LVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK 451

Query: 651 LGIHELVNFDFMDQPPVETLLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIV 710
           LGI +LV+FDFMD P  ETL+ ALE+L+          LTK G  M+EFP+DP +SKM++
Sbjct: 452 LGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLI 511

Query: 711 ASEKFKCSEEAISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNV-GDHIALMKVYNS 770
            S +F CS E +S++AMLSV N  F RP++ Q  AD A+  F  G++ GDH+ L+ VY++
Sbjct: 512 VSPEFNCSNEILSVSAMLSVPN-CFVRPREAQKAADEAKARF--GHIDGDHLTLLNVYHA 571

Query: 771 WRETNYSTQWCYENYIQVRSMKRARDIRDQLKGLLERVEIELTS-NFNDLD---SIKKTI 830
           +++ N    WC+EN++  R+MK A ++R QL  ++ R  +++ S +FN  D   +I+K +
Sbjct: 572 YKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAM 631

Query: 831 ISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITE 865
           ++G+F   A L++ G Y T K  Q VH+HP + L   +P W IY+E V T++ ++R +T+
Sbjct: 632 LAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTTRNFIRTVTD 691

The following BLAST results are available for this feature:

BLAST of Sed0024832 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879655.1	0.0e+00	80.37	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >X...	[more]
XP_022134864.1	0.0e+00	80.02	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica ...	[more]
XP_011660328.1	0.0e+00	79.71	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus] >KGN...	[more]
XP_008453258.1	0.0e+00	79.71	PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis me...	[more]
KAG6587574.1	0.0e+00	80.20	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, partial [Cucurbita ar...	[more]

BLAST of Sed0024832 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY00	0.0e+00	69.09	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thalian...	[more]
F4IJV4	0.0e+00	67.69	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsi...	[more]
F4JMJ3	1.2e-264	57.13	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsi...	[more]
Q54MH3	7.3e-257	53.83	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostel...	[more]
Q767K6	8.1e-256	53.13	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 ...	[more]

BLAST of Sed0024832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZI7	0.0e+00	80.02	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Momordic...	[more]
A0A0A0LUM2	0.0e+00	79.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1	[more]
A0A1S3BVU3	0.0e+00	79.71	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo OX=365...	[more]
A0A6J1F0A9	0.0e+00	80.20	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbit...	[more]
A0A6J1KTQ9	0.0e+00	79.98	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbit...	[more]

BLAST of Sed0024832 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32490.1	0.0e+00	69.09	RNA helicase family protein	[more]
AT1G32490.2	0.0e+00	68.50	RNA helicase family protein	[more]
AT2G35340.1	0.0e+00	67.69	helicase domain-containing protein	[more]
AT3G26560.1	1.3e-192	52.66	ATP-dependent RNA helicase, putative	[more]
AT2G47250.1	5.0e-176	46.06	RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	COILS	Coil	Coil	coord: 743..763
None	No IPR available	GENE3D	1.20.120.1080		coord: 618..767 e-value: 5.6E-24 score: 86.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 863..884
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR18934:SF208	OS05G0389800 PROTEIN	coord: 4..872
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 4..872
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 437..581 e-value: 1.21093E-57 score: 193.133
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 628..717 e-value: 9.7E-28 score: 108.2
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 633..700 e-value: 7.2E-18 score: 64.9
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 266..442 e-value: 1.8E-28 score: 110.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 278..433 score: 16.123732
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 468..573 e-value: 5.1E-16 score: 69.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 484..573 e-value: 2.5E-9 score: 37.4
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 438..614 score: 14.248459
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 436..594 e-value: 3.6E-50 score: 172.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 232..435 e-value: 2.0E-86 score: 290.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 262..758
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 774..850 e-value: 1.3E-17 score: 63.9
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 375..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024832.1	Sed0024832.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0004386	helicase activity