Homology
BLAST of Sed0024832 vs. NCBI nr
Match:
XP_038879655.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879656.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879657.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879658.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879659.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879660.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida])
HSP 1 Score: 1372.8 bits (3552), Expect = 0.0e+00
Identity = 733/912 (80.37%), Postives = 797/912 (87.39%), Query Frame = 0
Query: 6 REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
R+VKRR +SS DDGSESEE+R L DQ +REQLE N+R+RDAA TKK Q L+ K
Sbjct: 150 RQVKRR--ASSSEDDGSESEEER-LRDQREREQLEQNMRERDAAGTKK---LTEQKLSRK 209
Query: 66 DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
+EE IRRS+A LE N+G+ LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 210 --EEEEAIRRSEA-LE--NNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 269
Query: 126 LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
LTE+E+ ELRYKKEIY+ LVK +T+EADDINEYRMPE YDQ G V+QDKRFAV A+Q+
Sbjct: 270 LTEAEYRELRYKKEIYE-LVKKRTDEADDINEYRMPEAYDQEGGVNQDKRFAV-ALQRYR 329
Query: 186 DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
DS A+ EQ WEEHQ+ K TMKFGSKNK+QAS DDYQFVFEDQIEFIKASVM G
Sbjct: 330 DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQAS-DDYQFVFEDQIEFIKASVMEG 389
Query: 246 DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
DEF++E T+SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 390 DEFVDERQTESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 449
Query: 306 KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
KTTQIPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 450 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 509
Query: 366 DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
DKTVLKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 510 DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 569
Query: 426 LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+ +L
Sbjct: 570 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 629
Query: 486 ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTPIGAR
Sbjct: 630 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 689
Query: 546 KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT E+LQV PISKASANQRAGR GR
Sbjct: 690 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 749
Query: 606 TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E
Sbjct: 750 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 809
Query: 666 LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
LL+ALELL+ ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 810 LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 869
Query: 726 VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 870 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 929
Query: 786 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 930 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 989
Query: 846 TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS
Sbjct: 990 TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1046
BLAST of Sed0024832 vs. NCBI nr
Match:
XP_022134864.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia] >XP_022134865.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia] >XP_022134866.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia])
HSP 1 Score: 1372.1 bits (3550), Expect = 0.0e+00
Identity = 729/911 (80.02%), Postives = 794/911 (87.16%), Query Frame = 0
Query: 10 RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
RRR +SS DDG ESEE+R L DQ +REQLE NIR+RDAA T+K L+ K +E
Sbjct: 164 RRRTTSSEDDDGYESEEER-LRDQREREQLEQNIRERDAAGTRK---LTEPKLSRK--EE 223
Query: 70 EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
+ IRRSKA LE NDG+ LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVKLTE+
Sbjct: 224 DEAIRRSKA-LE--NDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEA 283
Query: 130 EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRTDSST 189
E+ ELRYKKEIY+ LVK +T+EADDI+EYRMPE YDQ G V+QDKRFAV A+Q+ DS T
Sbjct: 284 EYRELRYKKEIYE-LVKKRTDEADDIDEYRMPEAYDQEGGVNQDKRFAV-AMQRYRDSGT 343
Query: 190 AN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFI 249
A+ EQ WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM GDEF+
Sbjct: 344 ADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEGDEFV 403
Query: 250 N--ETQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQ 309
+ ET+SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSGKTTQ
Sbjct: 404 DERETESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQ 463
Query: 310 IPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTV 369
IPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTSDKTV
Sbjct: 464 IPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTV 523
Query: 370 LKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS 429
LKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS
Sbjct: 524 LKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS 583
Query: 430 ATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL------------ 489
ATLDAEKFSDYFDSAPIF+IPGRRYPVEIHFTKAPEADYLDAA+ +L
Sbjct: 584 ATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKPPGDIL 643
Query: 490 -----QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVL 549
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP+GARKVVL
Sbjct: 644 VFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGARKVVL 703
Query: 550 ATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPG 609
ATNIAETSLTIDGI YV+DPGF KIK+YNPRT ESLQV PISKASANQRAGR GRTGPG
Sbjct: 704 ATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPG 763
Query: 610 MCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEA 669
MCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E LL+A
Sbjct: 764 MCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKA 823
Query: 670 LELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNS 729
LELL+ ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS+GNS
Sbjct: 824 LELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNS 883
Query: 730 IFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRA 789
IFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRSMKRA
Sbjct: 884 IFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRA 943
Query: 790 RDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHI 849
RDIRDQL+GLLERVEIELTSN NDLD+IKKTIISG+FPH+ KLQKNGSY+T K PQTVHI
Sbjct: 944 RDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHI 1003
Query: 850 HPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMP 878
HP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS +KMP
Sbjct: 1004 HPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSSKKMP 1061
BLAST of Sed0024832 vs. NCBI nr
Match:
XP_011660328.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus] >KGN63716.1 hypothetical protein Csa_013602 [Cucumis sativus])
HSP 1 Score: 1369.0 bits (3542), Expect = 0.0e+00
Identity = 727/912 (79.71%), Postives = 797/912 (87.39%), Query Frame = 0
Query: 6 REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
R+VKRR+ +SS D+ SESEE+R L DQ +REQLE NIR+RDAA TKK Q L+ K
Sbjct: 151 RQVKRRQRASSSEDESSESEEER-LRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210
Query: 66 DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
+EE IRRS+A LE NDG+ LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 211 --EEEEAIRRSEA-LE--NDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 270
Query: 126 LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
LT++E+ EL+YKKEIY+ LVK +T+EADDINEYRMPE YDQ G V+QDKRFAV A+Q+
Sbjct: 271 LTDAEYRELKYKKEIYE-LVKKRTDEADDINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330
Query: 186 DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
DS A+ EQ WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM G
Sbjct: 331 DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEG 390
Query: 246 DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
DEF++E T+SL+ KSKA+SA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391 DEFVDERQTESLE-KSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450
Query: 306 KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
KTTQIPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510
Query: 366 DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
DKTVLKYMTDGMLLREFL EPDLASYS +MVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511 DKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570
Query: 426 LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+ +L
Sbjct: 571 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630
Query: 486 ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP GAR
Sbjct: 631 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPDGAR 690
Query: 546 KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT E+LQV PISKASANQRAGR GR
Sbjct: 691 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 750
Query: 606 TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E
Sbjct: 751 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810
Query: 666 LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
LL+ALELL+ ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 811 LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 870
Query: 726 VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 871 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 930
Query: 786 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISG+FPH+AKLQKNGSY+T K PQ
Sbjct: 931 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSAKLQKNGSYRTVKHPQ 990
Query: 846 TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS
Sbjct: 991 TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1049
BLAST of Sed0024832 vs. NCBI nr
Match:
XP_008453258.1 (PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo] >XP_008453259.1 PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo])
HSP 1 Score: 1365.9 bits (3534), Expect = 0.0e+00
Identity = 727/912 (79.71%), Postives = 796/912 (87.28%), Query Frame = 0
Query: 6 REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
R+VKRR +SS DD SESEE+R L DQ +REQLE NIR+RDAA TKK Q L+ K
Sbjct: 151 RQVKRR--ASSSEDDSSESEEER-LRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210
Query: 66 DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
+EE IRRS+A LE N+G+ LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 211 --EEEEAIRRSEA-LE--NNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 270
Query: 126 LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
LT++E+ ELRYKKEIY+ LVK +T+EADD+NEYRMPE YDQ G V+QDKRFAV A+Q+
Sbjct: 271 LTDAEYRELRYKKEIYE-LVKKRTDEADDVNEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330
Query: 186 DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
DS A+ EQ WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM G
Sbjct: 331 DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEG 390
Query: 246 DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
DEF++E T+SL+ KSKA+SA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391 DEFVDERQTESLE-KSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450
Query: 306 KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
KTTQIPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510
Query: 366 DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
DKTVLKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511 DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570
Query: 426 LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+ +L
Sbjct: 571 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630
Query: 486 ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP+GAR
Sbjct: 631 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGAR 690
Query: 546 KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT E+LQV PISKASANQRAGR GR
Sbjct: 691 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 750
Query: 606 TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E
Sbjct: 751 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810
Query: 666 LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
LL+ALELL+ ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 811 LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 870
Query: 726 VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETN+STQWCYENYIQVRS
Sbjct: 871 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNFSTQWCYENYIQVRS 930
Query: 786 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 931 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTVKHPQ 990
Query: 846 TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS
Sbjct: 991 TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1047
BLAST of Sed0024832 vs. NCBI nr
Match:
KAG6587574.1 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 729/909 (80.20%), Postives = 790/909 (86.91%), Query Frame = 0
Query: 6 REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
R+VKRR +SS DDGSESEE+R DQ +REQLE NIR+RDAA TKK Q L+ K
Sbjct: 233 RQVKRR--TSSSEDDGSESEEER-QRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 292
Query: 66 DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
+EE IRRSKA LE NDG LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF GVK
Sbjct: 293 --EEEEAIRRSKA-LE--NDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDGVK 352
Query: 126 LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
LTE E+ ELRYKKEIY+ LVK +T+EAD+INEYRMPE YDQ G V+QDKRFAV A+Q+
Sbjct: 353 LTEVEYRELRYKKEIYE-LVKKRTDEADEINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 412
Query: 186 DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
DS A+ EQ WE+HQ+ K +MKFGSKNK+QA DDYQFVFEDQIEFIKASVM G
Sbjct: 413 DSGAADKMNPFAEQEAWEDHQIGKASMKFGSKNKKQA--DDYQFVFEDQIEFIKASVMEG 472
Query: 246 DEFINETQ--SLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
DEF++E Q SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 473 DEFVDEHQIESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 532
Query: 306 KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
KTTQIPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 533 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 592
Query: 366 DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
DKT+LKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 593 DKTILKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 652
Query: 426 LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+ +L
Sbjct: 653 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 712
Query: 486 ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTPIGAR
Sbjct: 713 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 772
Query: 546 KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT ESLQV PISKASANQRAGR GR
Sbjct: 773 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGR 832
Query: 606 TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E
Sbjct: 833 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 892
Query: 666 LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
LL+ALELL+ ELTK+GRRMAEFP+DPMLSKM+VASEK KCS+E ISIAAMLS
Sbjct: 893 LLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLS 952
Query: 726 VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 953 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 1012
Query: 786 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 1013 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 1072
Query: 846 TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 872
TVHIHP SGL QV PRWA+YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLSQ
Sbjct: 1073 TVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQ 1125
BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match:
Q8VY00 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1)
HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 628/909 (69.09%), Postives = 742/909 (81.63%), Query Frame = 0
Query: 10 RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
RR++S DDGSESEE+R + DQ +RE+LE +++ RD ART+K Q L+ K+ +E
Sbjct: 152 RRKVSEE--DDGSESEEER-VRDQKEREELEQHLKDRDTARTRK---LTEQTLSKKEKEE 211
Query: 70 EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
+RR+ A LE D ++ LRKVSRQEYLKKREQKK++E+RD+IED+ +LF G KLTE+
Sbjct: 212 --AVRRANA-LE--KDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTET 271
Query: 130 EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRTDSST 189
E E RYKKE+YD LVK +T + D++ EYR+P+ YDQ G VDQ+KRF+V + R ST
Sbjct: 272 ELREFRYKKELYD-LVKKRTQDEDNVEEYRIPDAYDQEGGVDQEKRFSVAVQRYRDLDST 331
Query: 190 AN-----EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFIN 249
EQ WE+HQ+ K T+KFG+KNK+ + DDYQFVFEDQI FIK SVM G+ N
Sbjct: 332 EKMNPFAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGE---N 391
Query: 250 ETQSLDHKSKA-----KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKT 309
++D K K+ K+A+E+LQE R++LPIY YRDQLL+A+ ++QV+VIVG+TGSGKT
Sbjct: 392 YEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKT 451
Query: 310 TQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDK 369
TQIPQYLHE VGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDK
Sbjct: 452 TQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDK 511
Query: 370 TVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLI 429
TVLKYMTDGMLLRE L EPDLASYS ++VDEAHERTLSTD+LFGLVKDIARFRPDLKLLI
Sbjct: 512 TVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLI 571
Query: 430 SSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL---------- 489
SSAT+DAEKFSDYFD+APIF PGRRYPVEI++T APEADY+DAA+ L
Sbjct: 572 SSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGD 631
Query: 490 -------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKV 549
QE AEEILKHR RGLGTKI ELIICP+YANLP+ELQAKIFEPTP GARKV
Sbjct: 632 ILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKV 691
Query: 550 VLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTG 609
VLATNIAETSLTIDGI YVVDPGF K+K+YNPRT ESL + PISKASA QRAGR GRT
Sbjct: 692 VLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTS 751
Query: 610 PGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLL 669
PG C+RLYTAF+Y N++E+N VPE+QRTNLA VVL LK+LGIH+L+NFDFMD PP E L+
Sbjct: 752 PGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALV 811
Query: 670 EALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVG 729
++LELL ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAAMLS+G
Sbjct: 812 KSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIG 871
Query: 730 NSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMK 789
SIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVY+SW+ETN+STQWCYENYIQVRSMK
Sbjct: 872 GSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMK 931
Query: 790 RARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTV 849
RARDIRDQL+GLLERVEI+++SN N+LDS++K+I++GFFPH AKLQKNGSY+T K PQTV
Sbjct: 932 RARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTV 991
Query: 850 HIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRK 874
HIHP SGL QV PRW +YHELV TSKEYMRQ+TELKPEWLIE+APH+YQLKDVED + +K
Sbjct: 992 HIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1043
BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match:
F4IJV4 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsis thaliana OX=3702 GN=MEE29 PE=2 SV=1)
HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 618/913 (67.69%), Postives = 718/913 (78.64%), Query Frame = 0
Query: 4 IAREVKR--RRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQN 63
I RE KR RR S DDG+ESEE+R L DQ +RE+LE ++R+RD ART+ K ++
Sbjct: 143 IVREDKRNVRRKVSEDEDDGTESEEER-LRDQREREELEQHLRERDTARTR----KLTEP 202
Query: 64 LTDKDPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLF 123
K QEE +RR A + LRK S QEY+KKR+QKK+ E++DDIED+ +LF
Sbjct: 203 KMSKKEQEE-FVRRDSA---VDKGDIESLRKFSWQEYMKKRKQKKVLELKDDIEDEPYLF 262
Query: 124 QGVKLTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYD-QGIVDQDKRFAVRAV 183
KLTE E E RYK+EIY+ L+K T E D++ EYRMP+ YD QG VDQ+KRFAV +V
Sbjct: 263 GDEKLTEREIREFRYKREIYE-LIKKSTQEEDNVGEYRMPDAYDQQGSVDQEKRFAV-SV 322
Query: 184 QQRTDSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKAS 243
Q+ D +A EQ WE+HQ+ +KFG+KNK + D+Y+FVFEDQI+FIKAS
Sbjct: 323 QRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKEVS--DNYEFVFEDQIDFIKAS 382
Query: 244 VMGGDEFINETQSLDHKSKA-KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGET 303
V+ GD + +E + + A KSA LQE+RK LPIY YRDQLL A+ D+QV++IVGET
Sbjct: 383 VLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGET 442
Query: 304 GSGKTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFED 363
GSGKTTQIPQYLHE VGCTQPRRVAAMS+A+RV+QE+G KLGHEVGYSIRFED
Sbjct: 443 GSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFED 502
Query: 364 CTSDKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPD 423
CTS+KT+LKYMTDGMLLRE L EPDL SYS I+VDEAHERTL TD+LFGLVKDIAR RPD
Sbjct: 503 CTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPD 562
Query: 424 LKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL----- 483
LKLLISSAT+DAEKFSD+FD APIFR PGRRYPV+I FT APEADY+DAA++ L
Sbjct: 563 LKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVK 622
Query: 484 ------------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPI 543
QE EE LKH+ RGLGTKI ELIICP+YANLP+ELQAKIFEPTP
Sbjct: 623 EPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPE 682
Query: 544 GARKVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGR 603
GARKVVLATNIAETSLTIDGI YVVDPGF K+K+YNPRT ESL V PISKASA QR GR
Sbjct: 683 GARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGR 742
Query: 604 CGRTGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPP 663
GRT PG C+RLYTAF+YYN++EDN VPEIQRTNLA VVL LK+LGIH L+NFDFMD PP
Sbjct: 743 AGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPP 802
Query: 664 VETLLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAA 723
E L+++LELL ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAA
Sbjct: 803 SEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAA 862
Query: 724 MLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQ 783
MLS+G SIFYRPKDKQVHADNA NFH GNVGDHIA +K+YNSW+ETNYSTQWCYENYIQ
Sbjct: 863 MLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQ 922
Query: 784 VRSMKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAK 843
VRSMKRARDIRDQL+GLLERVEI+++SN N+LDSI+K+I++GFFPH AKLQKNGSY+T K
Sbjct: 923 VRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVK 982
Query: 844 SPQTVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVED 873
PQTVHIHP SGL QV PRW +YH+LV TSKEYMRQ+TELKPEWLIEIAPH+YQLKDVED
Sbjct: 983 HPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVED 1042
BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match:
F4JMJ3 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsis thaliana OX=3702 GN=At4g16680 PE=2 SV=2)
HSP 1 Score: 914.1 bits (2361), Expect = 1.2e-264
Identity = 493/863 (57.13%), Postives = 616/863 (71.38%), Query Frame = 0
Query: 64 DKDPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQG 123
+++ ++E + S S+D + LR+VSR++YL RE KK+EE+RD+ +DD
Sbjct: 57 EEEEEDENKTKLSSWEKVLSSDEILRLREVSRRKYLTDRENKKVEELRDERKDD------ 116
Query: 124 VKLTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAV---RA 183
DD+ YR P+ YDQ G +DQ KRF V R
Sbjct: 117 -----------------------------DDVEGYRFPDAYDQEGCIDQKKRFDVAKERY 176
Query: 184 VQQRTDSSTANEQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGD 243
++R EQ WE+HQ +K ++FG+K+K+Q D Y+FVF+D F++ S
Sbjct: 177 CERRRSGRVVTEQEAWEDHQAQKARVRFGAKDKKQVV-DGYEFVFDDLTGFVEES----- 236
Query: 244 EFINETQSLDHKS-KAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKT 303
+E ++ H+ +K+A EK +E R+ LPI+ YR++LL+ I + QV+VIVGETGSGKT
Sbjct: 237 ---SEAETGKHRGCYSKTAAEKAREGREFLPIHGYREELLKLIEENQVLVIVGETGSGKT 296
Query: 304 TQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDK 363
TQIPQYL E +GCTQPRRVAAMS+ASRV+QE+GVKLGHEVGYSIRFEDCTS+K
Sbjct: 297 TQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEK 356
Query: 364 TVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLI 423
TV+KYMTDGMLLRE L+EP L SYS I++DEAHERTLSTD+LF LVKD+A+ RPDL+L+I
Sbjct: 357 TVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLII 416
Query: 424 SSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAM--------SQSLQE 483
SSATL+A+KFS+YFDSA I+ IPGRRYPVE F K PE DYL+ + ++++ +
Sbjct: 417 SSATLEAKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAIGD 476
Query: 484 IYWY---AEEI------LKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKV 543
I + EEI LK R LGTK +E+IICP+Y+NLPT LQAK+FEP P G RKV
Sbjct: 477 ILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKV 536
Query: 544 VLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTG 603
VLATNIAETSLTIDG+ YV+DPG+ KI +YNPRT ESL V PISKASA QRAGR GRTG
Sbjct: 537 VLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTG 596
Query: 604 PGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLL 663
PG CFRLY ++E +PEIQR NLA VVL LK+LGI ++ NFDFMD PP LL
Sbjct: 597 PGKCFRLYN----IKDLEPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALL 656
Query: 664 EALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVG 723
+ALELL+ E+TK+G RM EFPVDPMLSKMIV SEK+KCS+E I+IAAMLSVG
Sbjct: 657 KALELLYALGALDEIGEITKVGERMVEFPVDPMLSKMIVGSEKYKCSKEIITIAAMLSVG 716
Query: 724 NSIFYRPKDKQVHADNARMNFH--TGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 783
NS+FYRPK++QV AD ARM+F+ T NVGDHIAL++VYNSW+E NYSTQWC E +IQ +S
Sbjct: 717 NSVFYRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKEENYSTQWCCEKFIQSKS 776
Query: 784 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 843
MKRARDIRDQL GLL ++ +ELTSN NDLD+IKK I++GFFPH+AKLQKNGSY+ K PQ
Sbjct: 777 MKRARDIRDQLLGLLNKIGVELTSNPNDLDAIKKAILAGFFPHSAKLQKNGSYRRVKEPQ 836
Query: 844 TVHIHPGSGLPQVRP-RWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLS 883
TV++HP SGL P +W +YHELV T+KEYMR TE+KPEWLIEIAPH+Y+LKD+ED
Sbjct: 837 TVYVHPNSGLFGASPSKWLVYHELVLTTKEYMRHTTEMKPEWLIEIAPHYYKLKDIEDTR 871
BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match:
Q54MH3 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum OX=44689 GN=dhx16 PE=3 SV=1)
HSP 1 Score: 888.3 bits (2294), Expect = 7.3e-257
Identity = 485/901 (53.83%), Postives = 642/901 (71.25%), Query Frame = 0
Query: 19 DDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQEEALIRRSKA 78
++G E E +R +Q + ++L I++RD TKK + D +E++ R+++
Sbjct: 223 NNGEEDEYER---EQREVKELSDRIKKRDEKSTKK-------KIVDDSETKESIERKNRL 282
Query: 79 NLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTESEHGELRYKK 138
N+ + R SR++YL EQK++ ++ +IE++ LF+ KLTE E + KK
Sbjct: 283 ---EQNEQLETERTKSRRKYLVGEEQKRLILLKREIEEEYELFKDQKLTEQEIKDFEKKK 342
Query: 139 EIYDVLVK--NQTNEADDINEYRMP-EPYDQGIVDQDKRFAVRAVQQRTDSSTAN----E 198
++Y++ + N++ ++DD Y++P E D+ + + ++ DSS+++ E
Sbjct: 343 KLYELASQRINESQQSDDY--YQLPSEIKDKDSLLKSSYINDNKNKKGNDSSSSSSYNPE 402
Query: 199 QHKWEEHQLRKGTMKFGSKNKRQASG--DDYQFVFEDQIEFIKASVM----GGDEFINET 258
Q +WE+++++ + + G ++Y++VFEDQIEFIK V+ GD +
Sbjct: 403 QKEWEQNRMKSAISENRGLSTANIGGGNEEYEYVFEDQIEFIKEEVLKQGQKGDGVMILK 462
Query: 259 QSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQIPQYL 318
D ++AK +QE RK+LP+YPYR+QL+ A+ +YQV++IVGETGSGKTTQIPQYL
Sbjct: 463 PGDDGSAQAKMT---IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYL 522
Query: 319 HE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMT 378
HE +GCTQPRRVAAMS+A+RV++E+G KLG+EVGYSIRFEDCTS KTVL+YMT
Sbjct: 523 HEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMT 582
Query: 379 DGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDA 438
DGML+REFL PDLASYS +++DEAHERTL TD+LFGL+KDI RFRPDLKLLISSAT+DA
Sbjct: 583 DGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDA 642
Query: 439 EKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL----------------- 498
E+FSDYFD AP F IPGR+Y V H+T+APEADYLDAA+ L
Sbjct: 643 ERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTG 702
Query: 499 QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVLATNIA 558
QE A E+L+ RTRGLGTKI ELII +Y+ LPT+LQAKIFEPTP ARKVVLATNIA
Sbjct: 703 QEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIA 762
Query: 559 ETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPGMCFRL 618
ETSLTIDGI YV+DPGF K K +NPRT ESL + P+S+ASANQR GR GR PG CFRL
Sbjct: 763 ETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRL 822
Query: 619 YTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEALELLH 678
+TA+++ NE+E+N +PEIQRTNL +VVL+LK++GI++L+NFDFMD PP +TL+ ALE L+
Sbjct: 823 FTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLY 882
Query: 679 ---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNSIFYRP 738
+LTKLGR+MAEFPVDP LSKMI+ASEK+KCSEE ++I AMLSVGN+IFYRP
Sbjct: 883 ALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRP 942
Query: 739 KDKQVHADNAR-MNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRARDIR 798
KDK AD AR + FH GDH+ LM V+N WRE+ Y+ QWC+EN+IQ RSMKRA+D+R
Sbjct: 943 KDKAFAADAARKLFFHP--QGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVR 1002
Query: 799 DQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGS 858
DQL+ LLERVEI L SN +D DSI+K I SGFF ++AKL+K+G ++T K Q+V IHP S
Sbjct: 1003 DQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSS 1062
Query: 859 GLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMPRGQG 872
L Q P+W +YHELV T+KE+MRQI E++ WL EIAPH Y+ KDV D +K+P+ G
Sbjct: 1063 CLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVND--NQKLPKNIG 1101
BLAST of Sed0024832 vs. ExPASy Swiss-Prot
Match:
Q767K6 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 GN=DHX16 PE=3 SV=1)
HSP 1 Score: 884.8 bits (2285), Expect = 8.1e-256
Identity = 476/896 (53.12%), Postives = 636/896 (70.98%), Query Frame = 0
Query: 19 DDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQEEALIRRSKA 78
+D E E+ L D +R+ +RQRD RT +N +DK EEA +R K
Sbjct: 165 EDEWERTERERLQDLEERDAFAERVRQRDKDRT-----RNVLERSDKKAYEEAQ-KRLKM 224
Query: 79 NLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTESEHGELRYKK 138
E+ V LRK SR+EYL KRE++K+E++ ++ D+ LF V+L+ E EL+YK+
Sbjct: 225 AEEDRKAMVPELRKKSRREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKR 284
Query: 139 EIYDVL----VKNQTNEADDINEYRMPEPYDQGIVDQDKRFAVRAVQQRTDSSTA--NEQ 198
+ D+ + + + N Y MPE + + RAV + S A EQ
Sbjct: 285 RVRDLAREYRAAGEQEKLEATNRYHMPE--------ETRGQPTRAVDLVEEESGAPGEEQ 344
Query: 199 HKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQ--IEFIKASVMGGDEFINETQSLDH 258
+WEE +L ++KFG+++ + YQ V E++ IEF++A+ + GDE E +
Sbjct: 345 RRWEEARLGAASLKFGARD-AASQEPKYQLVLEEEETIEFVRATQLQGDE---EPAAPPA 404
Query: 259 KSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQIPQYLHEVG- 318
++A+ E +Q R++LP++P+R++LL A+ ++Q+++I GETGSGKTTQIPQYL E G
Sbjct: 405 PTQAQQ-KESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGY 464
Query: 319 --------CTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGML 378
CTQPRRVAAMS+A+RV++E+GVKLG+EVGYSIRFEDCTS++TVL+YMTDGML
Sbjct: 465 TQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGML 524
Query: 379 LREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFS 438
LREFL EPDLASYS +MVDEAHERTL TD+LFGL+KD+ARFRP+LK+L++SATLD +FS
Sbjct: 525 LREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFS 584
Query: 439 DYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-----------------QEIY 498
+FD AP+FRIPGRR+PV+I +TKAPEADYL+A + L QE
Sbjct: 585 TFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEI 644
Query: 499 WYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVLATNIAETSL 558
A E+L+ R R LG+KI EL++ P+YANLP+++QA+IF+PTP GARKVV+ATNIAETSL
Sbjct: 645 EAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSL 704
Query: 559 TIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPGMCFRLYTAF 618
TI+GI YV+DPGF K K+YNPRT ESL V P SKASANQRAGR GR G CFRLYTA+
Sbjct: 705 TIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAW 764
Query: 619 SYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEALELLH---- 678
+Y +E+E+ VPEIQRT+L +VVL+LK+LGIH+L++FDF+D PP ETLL ALE L+
Sbjct: 765 AYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGA 824
Query: 679 -----ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNSIFYRPKDKQ 738
ELT GR+MAE PVDPMLSKMI+ASEK+ CSEE +++AAMLSV NSIFYRPKDK
Sbjct: 825 LNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKV 884
Query: 739 VHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLKG 798
VHADNAR+NF GDH+ L+ VY W E+ YS+QWCYEN++Q RSM+RARD+R+QL+G
Sbjct: 885 VHADNARVNFFLPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEG 944
Query: 799 LLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGSGLPQV 858
LLERVE+ L+S D ++K I +G+F H A+L ++G Y+T K QTV IHP S L +
Sbjct: 945 LLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEE 1004
Query: 859 RPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMPRGQGR 872
+PRW +YHELV T+KE+MRQ+ E++ WL+E+APH+Y+ K++ED +KMP+ G+
Sbjct: 1005 QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGK 1039
BLAST of Sed0024832 vs. ExPASy TrEMBL
Match:
A0A6J1BZI7 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007026 PE=4 SV=1)
HSP 1 Score: 1372.1 bits (3550), Expect = 0.0e+00
Identity = 729/911 (80.02%), Postives = 794/911 (87.16%), Query Frame = 0
Query: 10 RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
RRR +SS DDG ESEE+R L DQ +REQLE NIR+RDAA T+K L+ K +E
Sbjct: 164 RRRTTSSEDDDGYESEEER-LRDQREREQLEQNIRERDAAGTRK---LTEPKLSRK--EE 223
Query: 70 EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
+ IRRSKA LE NDG+ LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVKLTE+
Sbjct: 224 DEAIRRSKA-LE--NDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEA 283
Query: 130 EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRTDSST 189
E+ ELRYKKEIY+ LVK +T+EADDI+EYRMPE YDQ G V+QDKRFAV A+Q+ DS T
Sbjct: 284 EYRELRYKKEIYE-LVKKRTDEADDIDEYRMPEAYDQEGGVNQDKRFAV-AMQRYRDSGT 343
Query: 190 AN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFI 249
A+ EQ WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM GDEF+
Sbjct: 344 ADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEGDEFV 403
Query: 250 N--ETQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQ 309
+ ET+SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSGKTTQ
Sbjct: 404 DERETESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQ 463
Query: 310 IPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTV 369
IPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTSDKTV
Sbjct: 464 IPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTV 523
Query: 370 LKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS 429
LKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS
Sbjct: 524 LKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISS 583
Query: 430 ATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL------------ 489
ATLDAEKFSDYFDSAPIF+IPGRRYPVEIHFTKAPEADYLDAA+ +L
Sbjct: 584 ATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKPPGDIL 643
Query: 490 -----QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVL 549
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP+GARKVVL
Sbjct: 644 VFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGARKVVL 703
Query: 550 ATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPG 609
ATNIAETSLTIDGI YV+DPGF KIK+YNPRT ESLQV PISKASANQRAGR GRTGPG
Sbjct: 704 ATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPG 763
Query: 610 MCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEA 669
MCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E LL+A
Sbjct: 764 MCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKA 823
Query: 670 LELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNS 729
LELL+ ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS+GNS
Sbjct: 824 LELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNS 883
Query: 730 IFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRA 789
IFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRSMKRA
Sbjct: 884 IFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRA 943
Query: 790 RDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHI 849
RDIRDQL+GLLERVEIELTSN NDLD+IKKTIISG+FPH+ KLQKNGSY+T K PQTVHI
Sbjct: 944 RDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHI 1003
Query: 850 HPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKMP 878
HP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS +KMP
Sbjct: 1004 HPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSSKKMP 1061
BLAST of Sed0024832 vs. ExPASy TrEMBL
Match:
A0A0A0LUM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1)
HSP 1 Score: 1369.0 bits (3542), Expect = 0.0e+00
Identity = 727/912 (79.71%), Postives = 797/912 (87.39%), Query Frame = 0
Query: 6 REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
R+VKRR+ +SS D+ SESEE+R L DQ +REQLE NIR+RDAA TKK Q L+ K
Sbjct: 151 RQVKRRQRASSSEDESSESEEER-LRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210
Query: 66 DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
+EE IRRS+A LE NDG+ LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 211 --EEEEAIRRSEA-LE--NDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 270
Query: 126 LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
LT++E+ EL+YKKEIY+ LVK +T+EADDINEYRMPE YDQ G V+QDKRFAV A+Q+
Sbjct: 271 LTDAEYRELKYKKEIYE-LVKKRTDEADDINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330
Query: 186 DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
DS A+ EQ WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM G
Sbjct: 331 DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEG 390
Query: 246 DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
DEF++E T+SL+ KSKA+SA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391 DEFVDERQTESLE-KSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450
Query: 306 KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
KTTQIPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510
Query: 366 DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
DKTVLKYMTDGMLLREFL EPDLASYS +MVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511 DKTVLKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570
Query: 426 LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+ +L
Sbjct: 571 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630
Query: 486 ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP GAR
Sbjct: 631 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPDGAR 690
Query: 546 KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT E+LQV PISKASANQRAGR GR
Sbjct: 691 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 750
Query: 606 TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E
Sbjct: 751 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810
Query: 666 LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
LL+ALELL+ ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 811 LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 870
Query: 726 VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 871 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 930
Query: 786 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISG+FPH+AKLQKNGSY+T K PQ
Sbjct: 931 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSAKLQKNGSYRTVKHPQ 990
Query: 846 TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS
Sbjct: 991 TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1049
BLAST of Sed0024832 vs. ExPASy TrEMBL
Match:
A0A1S3BVU3 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo OX=3656 GN=LOC103494032 PE=4 SV=1)
HSP 1 Score: 1365.9 bits (3534), Expect = 0.0e+00
Identity = 727/912 (79.71%), Postives = 796/912 (87.28%), Query Frame = 0
Query: 6 REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
R+VKRR +SS DD SESEE+R L DQ +REQLE NIR+RDAA TKK Q L+ K
Sbjct: 151 RQVKRR--ASSSEDDSSESEEER-LRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210
Query: 66 DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
+EE IRRS+A LE N+G+ LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF+GVK
Sbjct: 211 --EEEEAIRRSEA-LE--NNGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVK 270
Query: 126 LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
LT++E+ ELRYKKEIY+ LVK +T+EADD+NEYRMPE YDQ G V+QDKRFAV A+Q+
Sbjct: 271 LTDAEYRELRYKKEIYE-LVKKRTDEADDVNEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330
Query: 186 DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
DS A+ EQ WEEHQ+ K TMKFGSKNK+Q+S DDYQFVFEDQIEFIKASVM G
Sbjct: 331 DSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSS-DDYQFVFEDQIEFIKASVMEG 390
Query: 246 DEFINE--TQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
DEF++E T+SL+ KSKA+SA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391 DEFVDERQTESLE-KSKAQSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450
Query: 306 KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
KTTQIPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510
Query: 366 DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
DKTVLKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511 DKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570
Query: 426 LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+ +L
Sbjct: 571 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630
Query: 486 ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTP+GAR
Sbjct: 631 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGAR 690
Query: 546 KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT E+LQV PISKASANQRAGR GR
Sbjct: 691 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMEALQVSPISKASANQRAGRSGR 750
Query: 606 TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E
Sbjct: 751 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810
Query: 666 LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
LL+ALELL+ ELTKLGRRMAEFP+DPMLSKM+VASEKFKCS+E ISIAAMLS
Sbjct: 811 LLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLS 870
Query: 726 VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETN+STQWCYENYIQVRS
Sbjct: 871 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNFSTQWCYENYIQVRS 930
Query: 786 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 931 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTVKHPQ 990
Query: 846 TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 875
TVHIHP SGL QV PRW +YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLS
Sbjct: 991 TVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSS 1047
BLAST of Sed0024832 vs. ExPASy TrEMBL
Match:
A0A6J1F0A9 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440982 PE=4 SV=1)
HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 729/909 (80.20%), Postives = 790/909 (86.91%), Query Frame = 0
Query: 6 REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
R+VKRR +SS DDGSESEE+R DQ +REQLE NIR+RDAA TKK Q L+ K
Sbjct: 151 RQVKRR--TSSSEDDGSESEEER-QRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210
Query: 66 DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
+EE IRRSKA LE NDG LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF GVK
Sbjct: 211 --EEEEAIRRSKA-LE--NDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDGVK 270
Query: 126 LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
LTE E+ ELRYKKEIY+ LVK +T+EAD+INEYRMPE YDQ G V+QDKRFAV A+Q+
Sbjct: 271 LTEVEYRELRYKKEIYE-LVKKRTDEADEINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330
Query: 186 DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
DS A+ EQ WE+HQ+ K +MKFGSKNK+QA DDYQFVFEDQIEFIKASVM G
Sbjct: 331 DSGAADKMNPFAEQEAWEDHQIGKASMKFGSKNKKQA--DDYQFVFEDQIEFIKASVMEG 390
Query: 246 DEFINETQ--SLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
DEF++E Q SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391 DEFVDEHQIESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450
Query: 306 KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
KTTQIPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510
Query: 366 DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
DKT+LKYMTDGMLLREFL EPDLASYS IMVDEAHERTLSTDVLFGLVKDIARFRPDLKL
Sbjct: 511 DKTILKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 570
Query: 426 LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+ +L
Sbjct: 571 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630
Query: 486 ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTPIGAR
Sbjct: 631 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 690
Query: 546 KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT ESLQV PISKASANQRAGR GR
Sbjct: 691 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGR 750
Query: 606 TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E
Sbjct: 751 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810
Query: 666 LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
LL+ALELL+ ELTK+GRRMAEFP+DPMLSKM+VASEK KCS+E ISIAAMLS
Sbjct: 811 LLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLS 870
Query: 726 VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 871 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 930
Query: 786 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 931 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 990
Query: 846 TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 872
TVHIHP SGL QV PRWA+YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLSQ
Sbjct: 991 TVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQ 1043
BLAST of Sed0024832 vs. ExPASy TrEMBL
Match:
A0A6J1KTQ9 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498124 PE=4 SV=1)
HSP 1 Score: 1357.4 bits (3512), Expect = 0.0e+00
Identity = 727/909 (79.98%), Postives = 788/909 (86.69%), Query Frame = 0
Query: 6 REVKRRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDK 65
R+VKRR +SS DDGSESEE+R DQ +REQLE NIR+RDAA TKK Q L+ K
Sbjct: 151 RQVKRR--TSSSEDDGSESEEER-QRDQREREQLERNIRERDAAGTKK---LTEQKLSRK 210
Query: 66 DPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVK 125
+EE IRRSKA LE NDG LRKVSRQEYLKKRE+KK+EE+RDDIED+ +LF GVK
Sbjct: 211 --EEEEAIRRSKA-LE--NDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDGVK 270
Query: 126 LTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRT 185
LTE E+ ELRYKKEIY+ LVK + +EAD+INEYRMPE YDQ G V+QDKRFAV A+Q+
Sbjct: 271 LTEVEYRELRYKKEIYE-LVKKRIDEADEINEYRMPEAYDQEGGVNQDKRFAV-AMQRYR 330
Query: 186 DSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGG 245
DS A+ EQ WEEHQ+ K +MKFGSKNK+QA DDYQFVFEDQIEFIKASVM G
Sbjct: 331 DSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQA--DDYQFVFEDQIEFIKASVMEG 390
Query: 246 DEFINETQ--SLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSG 305
DEF++E Q SL+ KSKAKSA+EKLQEERKTLPIYPYRDQLLQA+NDYQV+VIVGETGSG
Sbjct: 391 DEFVDEHQIESLE-KSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSG 450
Query: 306 KTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTS 365
KTTQIPQYLHE VGCTQPRRVAAMSIA+RVSQELGVKLGHEVGYSIRFEDCTS
Sbjct: 451 KTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTS 510
Query: 366 DKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKL 425
DKT+LKYMTDGMLLREFL EPDLA YS IMVDEAHERTLSTDVLFGLVKDIARFRP+LKL
Sbjct: 511 DKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLFGLVKDIARFRPELKL 570
Query: 426 LISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL-------- 485
LISSATLDAEKFSDYFDSAPIF+IPGRRYPVEI+FTKAPEADYLDAA+ +L
Sbjct: 571 LISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPP 630
Query: 486 ---------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGAR 545
QE AEEI+KHRTRGLGTKIAELIICP+YANLPTELQAKIFEPTPIGAR
Sbjct: 631 GDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGAR 690
Query: 546 KVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGR 605
KVVLATNIAETSLTIDGI YV+DPGF KIK+YNPRT ESLQV PISKASANQRAGR GR
Sbjct: 691 KVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGR 750
Query: 606 TGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVET 665
TGPGMCFRLYTA+SYYNEMEDN VPEIQRTNLA+VVL LK+LGIH+LVNFDFMDQPP E
Sbjct: 751 TGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEA 810
Query: 666 LLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLS 725
LL+ALELL+ ELTK+GRRMAEFP+DPMLSKM+VASEK KCS+E ISIAAMLS
Sbjct: 811 LLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLS 870
Query: 726 VGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRS 785
+GNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVYNSWRETNYSTQWCYENYIQVRS
Sbjct: 871 IGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRS 930
Query: 786 MKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQ 845
MKRARDIRDQL+GLLERVEIELTSN NDLD+IKKTIISGFFPH+AKLQKNGSY+T K PQ
Sbjct: 931 MKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQ 990
Query: 846 TVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQ 872
TVHIHP SGL QV PRWA+YHELVCTSKEYMRQ+TELKPEWL+EIAPHFYQLKDVEDLSQ
Sbjct: 991 TVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQ 1043
BLAST of Sed0024832 vs. TAIR 10
Match:
AT1G32490.1 (RNA helicase family protein )
HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 628/909 (69.09%), Postives = 742/909 (81.63%), Query Frame = 0
Query: 10 RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
RR++S DDGSESEE+R + DQ +RE+LE +++ RD ART+K Q L+ K+ +E
Sbjct: 152 RRKVSEE--DDGSESEEER-VRDQKEREELEQHLKDRDTARTRK---LTEQTLSKKEKEE 211
Query: 70 EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
+RR+ A LE D ++ LRKVSRQEYLKKREQKK++E+RD+IED+ +LF G KLTE+
Sbjct: 212 --AVRRANA-LE--KDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTET 271
Query: 130 EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQ-GIVDQDKRFAVRAVQQRTDSST 189
E E RYKKE+YD LVK +T + D++ EYR+P+ YDQ G VDQ+KRF+V + R ST
Sbjct: 272 ELREFRYKKELYD-LVKKRTQDEDNVEEYRIPDAYDQEGGVDQEKRFSVAVQRYRDLDST 331
Query: 190 AN-----EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFIN 249
EQ WE+HQ+ K T+KFG+KNK+ + DDYQFVFEDQI FIK SVM G+ N
Sbjct: 332 EKMNPFAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGE---N 391
Query: 250 ETQSLDHKSKA-----KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKT 309
++D K K+ K+A+E+LQE R++LPIY YRDQLL+A+ ++QV+VIVG+TGSGKT
Sbjct: 392 YEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKT 451
Query: 310 TQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDK 369
TQIPQYLHE VGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDK
Sbjct: 452 TQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDK 511
Query: 370 TVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLI 429
TVLKYMTDGMLLRE L EPDLASYS ++VDEAHERTLSTD+LFGLVKDIARFRPDLKLLI
Sbjct: 512 TVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLI 571
Query: 430 SSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL---------- 489
SSAT+DAEKFSDYFD+APIF PGRRYPVEI++T APEADY+DAA+ L
Sbjct: 572 SSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGD 631
Query: 490 -------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKV 549
QE AEEILKHR RGLGTKI ELIICP+YANLP+ELQAKIFEPTP GARKV
Sbjct: 632 ILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKV 691
Query: 550 VLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTG 609
VLATNIAETSLTIDGI YVVDPGF K+K+YNPRT ESL + PISKASA QRAGR GRT
Sbjct: 692 VLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTS 751
Query: 610 PGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLL 669
PG C+RLYTAF+Y N++E+N VPE+QRTNLA VVL LK+LGIH+L+NFDFMD PP E L+
Sbjct: 752 PGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALV 811
Query: 670 EALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVG 729
++LELL ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAAMLS+G
Sbjct: 812 KSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIG 871
Query: 730 NSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMK 789
SIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVY+SW+ETN+STQWCYENYIQVRSMK
Sbjct: 872 GSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMK 931
Query: 790 RARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTV 849
RARDIRDQL+GLLERVEI+++SN N+LDS++K+I++GFFPH AKLQKNGSY+T K PQTV
Sbjct: 932 RARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTV 991
Query: 850 HIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRK 874
HIHP SGL QV PRW +YHELV TSKEYMRQ+TELKPEWLIE+APH+YQLKDVED + +K
Sbjct: 992 HIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1043
BLAST of Sed0024832 vs. TAIR 10
Match:
AT1G32490.2 (RNA helicase family protein )
HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 622/908 (68.50%), Postives = 734/908 (80.84%), Query Frame = 0
Query: 10 RRRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQNLTDKDPQE 69
RR++S DDGSESEE+R + DQ +RE+LE +++ RD ART+K Q L+ K+ +E
Sbjct: 152 RRKVSEE--DDGSESEEER-VRDQKEREELEQHLKDRDTARTRK---LTEQTLSKKEKEE 211
Query: 70 EALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLFQGVKLTES 129
+RR+ A LE D ++ LRKVSRQEYLKKREQKK++E+RD+IED+ +LF G KLTE+
Sbjct: 212 --AVRRANA-LE--KDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTET 271
Query: 130 EHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYDQGIVDQDKRFAVRAVQQRTDSSTA 189
E E RYKKE+YD LVK +T + D++ E G VDQ+KRF+V + R ST
Sbjct: 272 ELREFRYKKELYD-LVKKRTQDEDNVEE---------GGVDQEKRFSVAVQRYRDLDSTE 331
Query: 190 N-----EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKASVMGGDEFINE 249
EQ WE+HQ+ K T+KFG+KNK+ + DDYQFVFEDQI FIK SVM G+ N
Sbjct: 332 KMNPFAEQEAWEDHQIGKATLKFGAKNKQ--ASDDYQFVFEDQINFIKESVMAGE---NY 391
Query: 250 TQSLDHKSKA-----KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTT 309
++D K K+ K+A+E+LQE R++LPIY YRDQLL+A+ ++QV+VIVG+TGSGKTT
Sbjct: 392 EDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTT 451
Query: 310 QIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKT 369
QIPQYLHE VGCTQPRRVAAMS+A+RV+QE+GVKLGHEVGYSIRFEDCTSDKT
Sbjct: 452 QIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKT 511
Query: 370 VLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLIS 429
VLKYMTDGMLLRE L EPDLASYS ++VDEAHERTLSTD+LFGLVKDIARFRPDLKLLIS
Sbjct: 512 VLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLIS 571
Query: 430 SATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL----------- 489
SAT+DAEKFSDYFD+APIF PGRRYPVEI++T APEADY+DAA+ L
Sbjct: 572 SATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDI 631
Query: 490 ------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVV 549
QE AEEILKHR RGLGTKI ELIICP+YANLP+ELQAKIFEPTP GARKVV
Sbjct: 632 LVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVV 691
Query: 550 LATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGP 609
LATNIAETSLTIDGI YVVDPGF K+K+YNPRT ESL + PISKASA QRAGR GRT P
Sbjct: 692 LATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSP 751
Query: 610 GMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLE 669
G C+RLYTAF+Y N++E+N VPE+QRTNLA VVL LK+LGIH+L+NFDFMD PP E L++
Sbjct: 752 GKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVK 811
Query: 670 ALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGN 729
+LELL ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAAMLS+G
Sbjct: 812 SLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGG 871
Query: 730 SIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKR 789
SIFYRPKDKQVHADNARMNFHTGNVGDHIAL+KVY+SW+ETN+STQWCYENYIQVRSMKR
Sbjct: 872 SIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKR 931
Query: 790 ARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVH 849
ARDIRDQL+GLLERVEI+++SN N+LDS++K+I++GFFPH AKLQKNGSY+T K PQTVH
Sbjct: 932 ARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVH 991
Query: 850 IHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRKM 874
IHP SGL QV PRW +YHELV TSKEYMRQ+TELKPEWLIE+APH+YQLKDVED + +KM
Sbjct: 992 IHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKM 1033
BLAST of Sed0024832 vs. TAIR 10
Match:
AT2G35340.1 (helicase domain-containing protein )
HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 618/913 (67.69%), Postives = 718/913 (78.64%), Query Frame = 0
Query: 4 IAREVKR--RRISSSGLDDGSESEEQRLLSDQIQREQLEHNIRQRDAARTKKPYYKNSQN 63
I RE KR RR S DDG+ESEE+R L DQ +RE+LE ++R+RD ART+ K ++
Sbjct: 143 IVREDKRNVRRKVSEDEDDGTESEEER-LRDQREREELEQHLRERDTARTR----KLTEP 202
Query: 64 LTDKDPQEEALIRRSKANLENSNDGVHVLRKVSRQEYLKKREQKKIEEMRDDIEDDNHLF 123
K QEE +RR A + LRK S QEY+KKR+QKK+ E++DDIED+ +LF
Sbjct: 203 KMSKKEQEE-FVRRDSA---VDKGDIESLRKFSWQEYMKKRKQKKVLELKDDIEDEPYLF 262
Query: 124 QGVKLTESEHGELRYKKEIYDVLVKNQTNEADDINEYRMPEPYD-QGIVDQDKRFAVRAV 183
KLTE E E RYK+EIY+ L+K T E D++ EYRMP+ YD QG VDQ+KRFAV +V
Sbjct: 263 GDEKLTEREIREFRYKREIYE-LIKKSTQEEDNVGEYRMPDAYDQQGSVDQEKRFAV-SV 322
Query: 184 QQRTDSSTAN------EQHKWEEHQLRKGTMKFGSKNKRQASGDDYQFVFEDQIEFIKAS 243
Q+ D +A EQ WE+HQ+ +KFG+KNK + D+Y+FVFEDQI+FIKAS
Sbjct: 323 QRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKEVS--DNYEFVFEDQIDFIKAS 382
Query: 244 VMGGDEFINETQSLDHKSKA-KSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIVGET 303
V+ GD + +E + + A KSA LQE+RK LPIY YRDQLL A+ D+QV++IVGET
Sbjct: 383 VLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGET 442
Query: 304 GSGKTTQIPQYLHE--------VGCTQPRRVAAMSIASRVSQELGVKLGHEVGYSIRFED 363
GSGKTTQIPQYLHE VGCTQPRRVAAMS+A+RV+QE+G KLGHEVGYSIRFED
Sbjct: 443 GSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFED 502
Query: 364 CTSDKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLVKDIARFRPD 423
CTS+KT+LKYMTDGMLLRE L EPDL SYS I+VDEAHERTL TD+LFGLVKDIAR RPD
Sbjct: 503 CTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPD 562
Query: 424 LKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAMSQSL----- 483
LKLLISSAT+DAEKFSD+FD APIFR PGRRYPV+I FT APEADY+DAA++ L
Sbjct: 563 LKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVK 622
Query: 484 ------------QEIYWYAEEILKHRTRGLGTKIAELIICPVYANLPTELQAKIFEPTPI 543
QE EE LKH+ RGLGTKI ELIICP+YANLP+ELQAKIFEPTP
Sbjct: 623 EPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPE 682
Query: 544 GARKVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESLQVIPISKASANQRAGR 603
GARKVVLATNIAETSLTIDGI YVVDPGF K+K+YNPRT ESL V PISKASA QR GR
Sbjct: 683 GARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGR 742
Query: 604 CGRTGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKTLGIHELVNFDFMDQPP 663
GRT PG C+RLYTAF+YYN++EDN VPEIQRTNLA VVL LK+LGIH L+NFDFMD PP
Sbjct: 743 AGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPP 802
Query: 664 VETLLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIVASEKFKCSEEAISIAA 723
E L+++LELL ELTK GRRMAEFP+DPMLSKMIV S+K+KCS+E ISIAA
Sbjct: 803 SEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAA 862
Query: 724 MLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALMKVYNSWRETNYSTQWCYENYIQ 783
MLS+G SIFYRPKDKQVHADNA NFH GNVGDHIA +K+YNSW+ETNYSTQWCYENYIQ
Sbjct: 863 MLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQ 922
Query: 784 VRSMKRARDIRDQLKGLLERVEIELTSNFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAK 843
VRSMKRARDIRDQL+GLLERVEI+++SN N+LDSI+K+I++GFFPH AKLQKNGSY+T K
Sbjct: 923 VRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVK 982
Query: 844 SPQTVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITELKPEWLIEIAPHFYQLKDVED 873
PQTVHIHP SGL QV PRW +YH+LV TSKEYMRQ+TELKPEWLIEIAPH+YQLKDVED
Sbjct: 983 HPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVED 1042
BLAST of Sed0024832 vs. TAIR 10
Match:
AT3G26560.1 (ATP-dependent RNA helicase, putative )
HSP 1 Score: 671.0 bits (1730), Expect = 1.3e-192
Identity = 336/638 (52.66%), Postives = 452/638 (70.85%), Query Frame = 0
Query: 261 LQEERKTLPIYPYRDQLLQAINDYQVIVIVGETGSGKTTQIPQYLHE--------VGCTQ 320
+QE+R++LPIY + +L+QA++D QV+V++GETGSGKTTQ+ QYL E +GCTQ
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567
Query: 321 PRRVAAMSIASRVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLA 380
PRRVAAMS+A RV++E G +LG EVGY+IRFEDCT TV+KYMTDGMLLRE L++ +L+
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 381 SYSAIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFRI 440
YS IM+DEAHERT+ TDVLFGL+K + + R DL+L+++SATLDAEKFS YF + IF I
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 441 PGRRYPVEIHFTKAPEADYLDAAMSQSLQ--------EIYWY---AEEI------LKHRT 500
PGR +PVEI +TK PE DYLDAA+ LQ +I + EEI L R
Sbjct: 688 PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747
Query: 501 RGLGTKIAELIICPVYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGISYVVDP 560
+GLG + ELII PVY+ LP+E+Q++IF+P P G RKVV+ATNIAE SLTIDGI YVVDP
Sbjct: 748 KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807
Query: 561 GFQKIKTYNPRTRTESLQVIPISKASANQRAGRCGRTGPGMCFRLYTAFSYYNEMEDNVV 620
GF K YNP+ ESL + PIS+ASA QRAGR GRTGPG C+RLYT +Y NEM +
Sbjct: 808 GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867
Query: 621 PEIQRTNLAHVVLILKTLGIHELVNFDFMDQPPVETLLEALELLHE---------LTKLG 680
PEIQR NL L +K +GI++L++FDFMD P + L+ A+E L+ LTKLG
Sbjct: 868 PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927
Query: 681 RRMAEFPVDPMLSKMIVASEKFKCSEEAISIAAMLSVGNSIFYRPKDKQVHADNARMNFH 740
R+MAEFP++P LSKM++AS CS+E +++ AM+ GN IFYRP++KQ AD R F
Sbjct: 928 RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 987
Query: 741 TGNVGDHIALMKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLKGLLERVEIELTS 800
GDH+ L+ VY +W+ N+S WC+EN+IQ RS++RA+D+R QL ++++ ++++ +
Sbjct: 988 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1047
Query: 801 NFNDLDSIKKTIISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGSGLPQVRPRWAIYHELV 860
+ I+K I +GFF H A+ Y+T Q V+IHP S L Q +P W IYH+LV
Sbjct: 1048 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1107
Query: 861 CTSKEYMRQITELKPEWLIEIAPHFYQLKDVEDLSQRK 865
T+KEYMR++T + P+WL+E+AP F+++ D +S+RK
Sbjct: 1108 MTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRK 1143
BLAST of Sed0024832 vs. TAIR 10
Match:
AT2G47250.1 (RNA helicase family protein )
HSP 1 Score: 615.9 bits (1587), Expect = 5.0e-176
Identity = 316/686 (46.06%), Postives = 453/686 (66.03%), Query Frame = 0
Query: 231 IKASVMGGDEFINETQSLDHKSKAKSAMEKLQEERKTLPIYPYRDQLLQAINDYQVIVIV 290
+ A+ GG IN+ + + +EK R+ LP++ +D L +N Q +++V
Sbjct: 32 LAAAAGGGSNLINKWNGKAYSQRYFEILEK----RRDLPVWLQKDDFLNTLNSNQTLILV 91
Query: 291 GETGSGKTTQIPQYLHE--------------VGCTQPRRVAAMSIASRVSQELGVKLGHE 350
GETGSGKTTQIPQ++ + VGCTQPRRVAAMS++ RV+ E+ V +G E
Sbjct: 92 GETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEE 151
Query: 351 VGYSIRFEDCTSDKTVLKYMTDGMLLREFLVEPDLASYSAIMVDEAHERTLSTDVLFGLV 410
VGYSIRFEDCTS +T+LKY+TDGMLLRE + +P L Y I++DEAHERTL+TDVLFGL+
Sbjct: 152 VGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLL 211
Query: 411 KDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFRIPGRRYPVEIHFTKAPEADYLDAAM 470
K++ R RPDLKL++ SATL+AEKF +YF AP+ ++PGR +PVEI +T+ PE DYL+AA+
Sbjct: 212 KEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAI 271
Query: 471 SQSLQ----------EIYWYAEEILKHRTR-------GLGTKIAELIICPVYANLPTELQ 530
+Q ++ EE ++ R LG ++ + + P+Y+ LP +Q
Sbjct: 272 RTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQ 331
Query: 531 AKIFEPTPI-------GARKVVLATNIAETSLTIDGISYVVDPGFQKIKTYNPRTRTESL 590
KIF+P P+ RK+V++TNIAETSLTIDGI YV+DPGF K K YNPR R ESL
Sbjct: 332 QKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESL 391
Query: 591 QVIPISKASANQRAGRCGRTGPGMCFRLYTAFSYYNEMEDNVVPEIQRTNLAHVVLILKT 650
V PISKASA+QR+GR GRT PG CFRLYT S+ N+++ PEI R+NLA+ VL LK
Sbjct: 392 LVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK 451
Query: 651 LGIHELVNFDFMDQPPVETLLEALELLH---------ELTKLGRRMAEFPVDPMLSKMIV 710
LGI +LV+FDFMD P ETL+ ALE+L+ LTK G M+EFP+DP +SKM++
Sbjct: 452 LGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLI 511
Query: 711 ASEKFKCSEEAISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNV-GDHIALMKVYNS 770
S +F CS E +S++AMLSV N F RP++ Q AD A+ F G++ GDH+ L+ VY++
Sbjct: 512 VSPEFNCSNEILSVSAMLSVPN-CFVRPREAQKAADEAKARF--GHIDGDHLTLLNVYHA 571
Query: 771 WRETNYSTQWCYENYIQVRSMKRARDIRDQLKGLLERVEIELTS-NFNDLD---SIKKTI 830
+++ N WC+EN++ R+MK A ++R QL ++ R +++ S +FN D +I+K +
Sbjct: 572 YKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAM 631
Query: 831 ISGFFPHAAKLQKNGSYQTAKSPQTVHIHPGSGLPQVRPRWAIYHELVCTSKEYMRQITE 865
++G+F A L++ G Y T K Q VH+HP + L +P W IY+E V T++ ++R +T+
Sbjct: 632 LAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTTRNFIRTVTD 691
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038879655.1 | 0.0e+00 | 80.37 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >X... | [more] |
| XP_022134864.1 | 0.0e+00 | 80.02 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica ... | [more] |
| XP_011660328.1 | 0.0e+00 | 79.71 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus] >KGN... | [more] |
| XP_008453258.1 | 0.0e+00 | 79.71 | PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis me... | [more] |
| KAG6587574.1 | 0.0e+00 | 80.20 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, partial [Cucurbita ar... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q8VY00 | 0.0e+00 | 69.09 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thalian... | [more] |
| F4IJV4 | 0.0e+00 | 67.69 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsi... | [more] |
| F4JMJ3 | 1.2e-264 | 57.13 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsi... | [more] |
| Q54MH3 | 7.3e-257 | 53.83 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostel... | [more] |
| Q767K6 | 8.1e-256 | 53.13 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1BZI7 | 0.0e+00 | 80.02 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Momordic... | [more] |
| A0A0A0LUM2 | 0.0e+00 | 79.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1 | [more] |
| A0A1S3BVU3 | 0.0e+00 | 79.71 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo OX=365... | [more] |
| A0A6J1F0A9 | 0.0e+00 | 80.20 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbit... | [more] |
| A0A6J1KTQ9 | 0.0e+00 | 79.98 | pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbit... | [more] |
