Sed0024785 (gene) Chayote v1

Overview


Name	Sed0024785
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CTD small phosphatase-like protein
Location	LG04: 23938521 .. 23941262 (+)
RNA-Seq Expression	Sed0024785
Synteny	Sed0024785

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCAGTTAGGCCAAACCGAGGTCTGTGCGCCGAGGTCTCTGCAAGTATGGCGAGCTTTGATCGATTGGCTCTCTTTCGTTTTTCATATAATTTCTCAGATCGTGCGTGGTGCTCCTTCTTTGGCTCAGATCTTGTCCTATGTCGGTGTTAGATTGCCTCTTCTTGCCTCATCTGCGCCATCATTTAAGCCGTTGCCTGTTGCTGAGCTTCCTCTTCATCAGATTTCAGCTAACAAAGTTAGCTCTCTCAGTGACGTAGATGATGGTGGAACTCAAGATCGCCCGCTGGAAAAGATTACGGTAATGTTCGTTTTGTTTTTGTTTTTTCCTTGTTTTTGAAGAAAATGTGAGGCTAAGTTGATGATTGTGGACATGTTAGAAGCAGTAGACACTAGAAATTGGCTCTATTTAAGCTTTTGATGACTGATTTGCTGAGTAGTTTATGGTTTTTGTTCTTAGTATTTAGAATTTACAAAGGGCGTCGTGTAAGTGCTAGATGTTAGAGCGTTGATATTGGTATGTGATTTCATAGTTCAGCTGTTATGTTGAATTGAATTCTAATTTCCGATGGTAATGGATTTCATCGACCGTTAGCCTTCAAAACCATAGAGTACCCGATTGCTTTTATGATTAAGTGGGGGCAATTTATTGTAGCTTAAGATTTATTACTATTATTTTTTTTGAGTAGTGGATGGGAGACAAATACCGATTTTCGGGATCGAACCTGTGACACTGGTGTTAAACTGATTTACAATCAAATAATAAAACTATTGTGCCACTCACCCATTTGATCTCTTAGGAACCTGTGAAGTTAGTTACATATATATTGTAGCCTAAGAAATGAGCATAGAGATTTGGAACTCGATCTCTTAGGAAAGAAGTAGCTAGTTATGTAGAAAATTAGTTGTATCGAATCCTCAAATCATTAAATGTTGAACTAAAACATATATGTAACTAACTAATTACTGCTTAGTTATGCATACTTTAGTAAAATGTCAAATATTTGGAATCTTATTGTTATAATGTTGGGATAGACCAAGTTTACTGAACTGTTGATGCATTTGCCATATGATTTTAATACTTCAATTGCGCATTCAGGTGGTTCTTGATTTGGATGATACCTTGATATGTGCATATGAAACATCCAGCTTGCCAGCCATTTTTTGCACTCAGGCAACCGAAGCTGGCTTGAATTGGTTTGAGCTAGAATGTGTCTCCTCGGATAAGGTAGTTCTGGATTTCTCTTATTAGGCTACATATTTTTAAACTCTACTTGAAAATTTTATGCCCCGTTCGATAACTATTTGATTTTTTTTTTTGGTTTTTGAAATTTAAGCTTACTTTTACTTAAATTTTCTATAACATCTTTTCTATAATATAGCTATCTTTCCTTAAGAAAGTATGTGAATGCTAGACACGTTTCAAAAACAAAAACAAAATTTTGGAAGTTACTTTTTTTTTTGTTTCCAAATTTTTGTTTGGTTTCTAAAAATATAAGTAAGATGTAGATATACAAATAAGAAAAAAATATATGATAAGGTAGTTGTCTTGTCGTAGGCTTAAATTTCAAAAATAAAAAACTAAAAATAAAATGGTTATCAAATGGTGCCTTAATTCATTGATTAATTTTGGTAGCTCCATCGCAGGAATATGAAGGAAAGCCAAAGATCAGTCATGTGACTGTATTTGAACGTCCTGGATTACATGAGTTCTTGAGCCAGGCTGCTGAATTTTCTGAACTCATTTTATTCACTGCGGGCCTTGAAGGTTTGAAAACATTGATTAATGACTTTCCTCTTTTCTTGTTTTGGATATCTGTTAATGTTCGAGGACACCTCGACTATTTTCACGGGACTTTTTTCCTTTTATTTTATTTTCATATGTGGTTTCTTGCGGTTGTACAGGATATGCTAGACCACTGGTTGACAGAATAGATTCAGAGGGCAGATTTAGCCTTCGACTTTATCGACCATCAACAGTTAGCACGTAAGTACTTTTACTTATCAGCAGGAATAGTATTCTGAGTGTAATATAATTTACCTCTATAAGGTTTAGAATCTGTGATTACTCATTCCTAGTGTACAACTCAATTAAGCAAGCATTTCCTTTGCCGAGAGATTTTATATTTTAAGGTTCTGTTCATGCTTTTGACTTTAAATTATCAAAGAGGATGTTATGTTGCAATTAAAATTTCAAATGTATACATTTTTTAAAATTTCTTGATTCTTGGTAACATGAGCATCTTTTCATGTATTTTCTTCAATGATATACTTCGTTTTTAGTTCTTTTCTGCTGTTCAATATATAAAGAATATCGAGACGATAATTTTTTAAGGTTCTTATTTCTTTCACCAGCAGATGTATCTTTAAATTGCAGTGAATACAGAGAACATGTAAAAGATCTATCATGTTTACATAGAGATCTCTCTCGAGTTGTTATTATCGACAACAATCCTTTTAGTTTCTTGCTGCAACCATTGAATGGAATCCCATGCCTTCCATTCTCTCCTGCTCAGCCTTCTGATGATCAGGTAGAAATCTTCTGAAAATGGGTCTTTCAAACGGATGGTCCATTCCATTAGATAACTCACTTGCCCTTTGTTCTGTGATGTGCCTTCTTCAGCTTTTAGACGTCCTGCTCCCGCTCCTCAAACACCTTGCCCTTGAAGAAGACGTCCGGCGCGTACTTTACGAAAAATTCCACATGCCCGAATGGTTTCAAATGCAGGGAATTCCTTAG

mRNA sequence

ATGGCGCAGTTAGGCCAAACCGAGGTCTGTGCGCCGAGGTCTCTGCAAGTATGGCGAGCTTTGATCGATTGGCTCTCTTTCGTTTTTCATATAATTTCTCAGATCGTGCGTGGTGCTCCTTCTTTGGCTCAGATCTTGTCCTATGTCGGTGTTAGATTGCCTCTTCTTGCCTCATCTGCGCCATCATTTAAGCCGTTGCCTGTTGCTGAGCTTCCTCTTCATCAGATTTCAGCTAACAAAGTTAGCTCTCTCAGTGACGTAGATGATGGTGGAACTCAAGATCGCCCGCTGGAAAAGATTACGGTGGTTCTTGATTTGGATGATACCTTGATATGTGCATATGAAACATCCAGCTTGCCAGCCATTTTTTGCACTCAGGCAACCGAAGCTGGCTTGAATTGGTTTGAGCTAGAATGTGTCTCCTCGGATAAGGAATATGAAGGAAAGCCAAAGATCAGTCATGTGACTGTATTTGAACGTCCTGGATTACATGAGTTCTTGAGCCAGGCTGCTGAATTTTCTGAACTCATTTTATTCACTGCGGGCCTTGAAGGATATGCTAGACCACTGGTTGACAGAATAGATTCAGAGGGCAGATTTAGCCTTCGACTTTATCGACCATCAACAGTTAGCACTGAATACAGAGAACATGTAAAAGATCTATCATGTTTACATAGAGATCTCTCTCGAGTTGTTATTATCGACAACAATCCTTTTAGTTTCTTGCTGCAACCATTGAATGGAATCCCATGCCTTCCATTCTCTCCTGCTCAGCCTTCTGATGATCAGCTTTTAGACGTCCTGCTCCCGCTCCTCAAACACCTTGCCCTTGAAGAAGACGTCCGGCGCGTACTTTACGAAAAATTCCACATGCCCGAATGGTTTCAAATGCAGGGAATTCCTTAG

Coding sequence (CDS)

ATGGCGCAGTTAGGCCAAACCGAGGTCTGTGCGCCGAGGTCTCTGCAAGTATGGCGAGCTTTGATCGATTGGCTCTCTTTCGTTTTTCATATAATTTCTCAGATCGTGCGTGGTGCTCCTTCTTTGGCTCAGATCTTGTCCTATGTCGGTGTTAGATTGCCTCTTCTTGCCTCATCTGCGCCATCATTTAAGCCGTTGCCTGTTGCTGAGCTTCCTCTTCATCAGATTTCAGCTAACAAAGTTAGCTCTCTCAGTGACGTAGATGATGGTGGAACTCAAGATCGCCCGCTGGAAAAGATTACGGTGGTTCTTGATTTGGATGATACCTTGATATGTGCATATGAAACATCCAGCTTGCCAGCCATTTTTTGCACTCAGGCAACCGAAGCTGGCTTGAATTGGTTTGAGCTAGAATGTGTCTCCTCGGATAAGGAATATGAAGGAAAGCCAAAGATCAGTCATGTGACTGTATTTGAACGTCCTGGATTACATGAGTTCTTGAGCCAGGCTGCTGAATTTTCTGAACTCATTTTATTCACTGCGGGCCTTGAAGGATATGCTAGACCACTGGTTGACAGAATAGATTCAGAGGGCAGATTTAGCCTTCGACTTTATCGACCATCAACAGTTAGCACTGAATACAGAGAACATGTAAAAGATCTATCATGTTTACATAGAGATCTCTCTCGAGTTGTTATTATCGACAACAATCCTTTTAGTTTCTTGCTGCAACCATTGAATGGAATCCCATGCCTTCCATTCTCTCCTGCTCAGCCTTCTGATGATCAGCTTTTAGACGTCCTGCTCCCGCTCCTCAAACACCTTGCCCTTGAAGAAGACGTCCGGCGCGTACTTTACGAAAAATTCCACATGCCCGAATGGTTTCAAATGCAGGGAATTCCTTAG

Protein sequence

MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSAPSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLPAIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFTAGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGIP

Homology

[Close]

BLAST of Sed0024785 vs. NCBI nr
Match: XP_023539290.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153
Identity = 270/301 (89.70%), Postives = 289/301 (96.01%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           MAQ+GQ EVC PRSLQVW+ALIDWLSF  HII+QIVRGAPS AQILSYVGVRLPLLASS+
Sbjct: 1   MAQIGQAEVCVPRSLQVWQALIDWLSFFVHIIAQIVRGAPSWAQILSYVGVRLPLLASSS 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
           PSFKPLP+AELPLHQ+SA K+S  +DVDDGG++DRPLEKITVVLDLD+TL+CAYETSSLP
Sbjct: 61  PSFKPLPIAELPLHQLSAKKLSPPTDVDDGGSRDRPLEKITVVLDLDETLVCAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGLNWF+LECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEF+ELILFT
Sbjct: 121 AVFRTQATEAGLNWFQLECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFAELILFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCL RDLSRVVIIDNNPFS
Sbjct: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLRRDLSRVVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQPLNGIPCLPFSPAQPSD+QLLDVLLPLLKHLALE+DVR VL+EKFHMPEWFQ+ GI
Sbjct: 241 FLLQPLNGIPCLPFSPAQPSDNQLLDVLLPLLKHLALEKDVRPVLHEKFHMPEWFQIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

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BLAST of Sed0024785 vs. NCBI nr
Match: XP_022971384.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like [Cucurbita maxima])

HSP 1 Score: 551.2 bits (1419), Expect = 5.5e-153
Identity = 269/301 (89.37%), Postives = 288/301 (95.68%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           MAQ+GQ EVC PRSLQVW+ALIDWLSF  HII+QIVRGAPS AQILSYVGVRLPLLASS+
Sbjct: 1   MAQIGQAEVCVPRSLQVWQALIDWLSFFVHIIAQIVRGAPSWAQILSYVGVRLPLLASSS 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
           PSFKPLP+AEL LHQ+SA K+S L+DVDDGG++DRPLEKITVVLDLD+TL+CAYETSSLP
Sbjct: 61  PSFKPLPIAELSLHQLSAKKLSPLTDVDDGGSRDRPLEKITVVLDLDETLVCAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGLNWF+LECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEF+ELILFT
Sbjct: 121 AVFRTQATEAGLNWFQLECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFAELILFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCL RDLSRVVIIDNNPFS
Sbjct: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLRRDLSRVVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQPLNGIPCLPFSPAQPSD+QLLDVLLPLLKHLALE+DVR +LYEKFHMPEWF + GI
Sbjct: 241 FLLQPLNGIPCLPFSPAQPSDNQLLDVLLPLLKHLALEKDVRPILYEKFHMPEWFHIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. NCBI nr
Match: KAG7027896.1 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152
Identity = 269/301 (89.37%), Postives = 287/301 (95.35%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           MAQ+GQ EVC  RSLQVW+ALIDWLSF  HII+QIVRGAPS AQILSYVGVRLPLLASS+
Sbjct: 1   MAQIGQAEVCVSRSLQVWQALIDWLSFFVHIIAQIVRGAPSWAQILSYVGVRLPLLASSS 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
           PSFKPLP+AELPLHQ+SA K+S  +DVDDGG++DRPLEKITVVLDLD+TL+CAYETSSLP
Sbjct: 61  PSFKPLPIAELPLHQLSAKKLSPPTDVDDGGSRDRPLEKITVVLDLDETLVCAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGLNWF+LECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEF+ELILFT
Sbjct: 121 AVFRTQATEAGLNWFQLECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFAELILFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCL RDLSRVVIIDNNPFS
Sbjct: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLRRDLSRVVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQPLNGIPCLPFSPAQPSD+QLLDVLLPLLKHLALE+DVR VLYE FHMPEWFQ+ GI
Sbjct: 241 FLLQPLNGIPCLPFSPAQPSDNQLLDVLLPLLKHLALEKDVRPVLYENFHMPEWFQIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. NCBI nr
Match: XP_022145564.1 (CTD nuclear envelope phosphatase 1-like [Momordica charantia])

HSP 1 Score: 545.4 bits (1404), Expect = 3.0e-151
Identity = 268/301 (89.04%), Postives = 284/301 (94.35%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           MAQ+GQTEVCAPRS+QVWRAL+DWLSF  HII QIVRGAPSLAQILSYVGVR PLLASS 
Sbjct: 1   MAQIGQTEVCAPRSVQVWRALVDWLSFFCHIIVQIVRGAPSLAQILSYVGVRFPLLASSG 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
            SFKPLPV+ELPLHQ SA KVSSLS VD GGTQDRPLEKITVVLDLD+TLICAYETSSLP
Sbjct: 61  SSFKPLPVSELPLHQFSATKVSSLSGVDVGGTQDRPLEKITVVLDLDETLICAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGLNWFELECVSSDKEYEGKPK+SHVTVFERPGLHEFL QAAEF+EL+LFT
Sbjct: 121 AVFRTQATEAGLNWFELECVSSDKEYEGKPKVSHVTVFERPGLHEFLRQAAEFAELVLFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSC+  DLSR+VIIDNNPFS
Sbjct: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCIQSDLSRIVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQPLNGIPC+PFSPAQPSD+QLL+VLLPLLK LALE+DVR VLYEKFHMPEWFQ+ GI
Sbjct: 241 FLLQPLNGIPCIPFSPAQPSDNQLLEVLLPLLKRLALEKDVRPVLYEKFHMPEWFQIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. NCBI nr
Match: XP_022948744.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like [Cucurbita moschata])

HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150
Identity = 267/301 (88.70%), Postives = 286/301 (95.02%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           MAQ+GQ EVC PRSLQVW+ALIDWLSF  HII+QIVRGAPS AQILSYVGVRLPLLASSA
Sbjct: 1   MAQIGQAEVCVPRSLQVWQALIDWLSFFVHIIAQIVRGAPSWAQILSYVGVRLPLLASSA 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
           PSFKPLP+AE+PLHQ+SA K+S  +D DDGG++D  LEKITVVLDLD+TL+CAYETSSLP
Sbjct: 61  PSFKPLPIAEIPLHQLSAKKLSPPTDGDDGGSRDCSLEKITVVLDLDETLVCAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGL+WF+LECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEF+ELILFT
Sbjct: 121 AVFRTQATEAGLDWFQLECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFAELILFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCL RDLSRVVIIDNNPFS
Sbjct: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLRRDLSRVVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQPLNGIPCLPFSPAQPSD+QLLDVLLPLLKHLALE+DVR VLYEKFHMPEWFQ+ GI
Sbjct: 241 FLLQPLNGIPCLPFSPAQPSDNQLLDVLLPLLKHLALEKDVRPVLYEKFHMPEWFQIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. ExPASy Swiss-Prot
Match: Q9D880 (Mitochondrial import inner membrane translocase subunit TIM50 OS=Mus musculus OX=10090 GN=Timm50 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.5e-17
Identity = 55/129 (42.64%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 159 ERPGLHEFLSQAAEFSELILFTAGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHV 218
           +RPG+     Q A   E+++FT+     A PL+D +D  G  S RL+R +T   E   HV
Sbjct: 173 KRPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDPHGFISYRLFRDATRYME-GHHV 232

Query: 219 KDLSCLHRDLSRVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALE 278
           KD+SCL+RD +RVV++D    +F LQP NG+   P+     SDD++L  L   LK +AL 
Sbjct: 233 KDISCLNRDPARVVVVDCKKEAFRLQPFNGVALRPWD--GNSDDRVLLDLSAFLKTIALN 292

Query: 279 --EDVRRVL 286
             EDVR VL
Sbjct: 293 QVEDVRTVL 298

[Close]

BLAST of Sed0024785 vs. ExPASy Swiss-Prot
Match: Q1RMV9 (CTD nuclear envelope phosphatase 1 OS=Bos taurus OX=9913 GN=CTDNEP1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-16
Identity = 69/221 (31.22%), Postives = 107/221 (48.42%), Query Frame = 0


Query: 71  LPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSL-PAIFCTQATE 130
           LPL  +S N++S              +++  +VLDLD+TLI ++    L P +      +
Sbjct: 46  LPLSPVSRNRLSQ-------------VKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPD 105

Query: 131 AGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFTAGLEGYARP 190
                F L+ V                V +RP +  FL   +++ EL++FTA +E Y   
Sbjct: 106 -----FILKVVIDKHPV-------RFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 165

Query: 191 LVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFSFLLQPLNGI 250
           + D++D+      R Y     + E   ++KDLS +H DLS +VI+DN+P ++   P N I
Sbjct: 166 VADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAI 225

Query: 251 PCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFH 291
           P   +  + PSD  LL+ LLP+L  L    DVR VL    H
Sbjct: 226 PIKSWF-SDPSDTALLN-LLPMLDALRFTADVRSVLSRNLH 239

[Close]

BLAST of Sed0024785 vs. ExPASy Swiss-Prot
Match: Q9XYL0 (Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum OX=44689 GN=fcpA PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-16
Identity = 71/188 (37.77%), Postives = 94/188 (50.00%), Query Frame = 0


Query: 101 TVVLDLDDTLI-CAYETSSLPAIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFE 160
           T+VLDLD+TL+  +++    P                        E EG   I  V V +
Sbjct: 138 TLVLDLDETLVHSSFKPVHNPDFIV------------------PVEIEG--TIHQVYVVK 197

Query: 161 RPGLHEFLSQAAEFSELILFTAGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVK 220
           RP + +FL   AE  E+++FTA L  YA P++D +D+      RL+R S        +VK
Sbjct: 198 RPFVDDFLRAIAEKFEIVVFTASLAKYADPVLDFLDTGRVIHYRLFRES-CHNHKGNYVK 257

Query: 221 DLSCLHRDLSRVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEE 280
           DLS L RDL   +I+DN+P S+L  P N IP    S     DD+ L  LLPLL  L   E
Sbjct: 258 DLSRLGRDLKSTIIVDNSPSSYLFHPENAIPI--DSWFDDKDDRELLDLLPLLDDLIKVE 302

Query: 281 DVRRVLYE 288
           DVR VL E
Sbjct: 318 DVRLVLDE 302

[Close]

BLAST of Sed0024785 vs. ExPASy Swiss-Prot
Match: O95476 (CTD nuclear envelope phosphatase 1 OS=Homo sapiens OX=9606 GN=CTDNEP1 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16
Identity = 68/221 (30.77%), Postives = 107/221 (48.42%), Query Frame = 0


Query: 71  LPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSL-PAIFCTQATE 130
           LPL  +S N+++              +++  +VLDLD+TLI ++    L P +      +
Sbjct: 46  LPLSPVSRNRLAQ-------------VKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPD 105

Query: 131 AGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFTAGLEGYARP 190
                F L+ V                V +RP +  FL   +++ EL++FTA +E Y   
Sbjct: 106 -----FILKVVIDKHPV-------RFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 165

Query: 191 LVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFSFLLQPLNGI 250
           + D++D+      R Y     + E   ++KDLS +H DLS +VI+DN+P ++   P N I
Sbjct: 166 VADKLDNSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAI 225

Query: 251 PCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFH 291
           P   +  + PSD  LL+ LLP+L  L    DVR VL    H
Sbjct: 226 PIKSWF-SDPSDTALLN-LLPMLDALRFTADVRSVLSRNLH 239

[Close]

BLAST of Sed0024785 vs. ExPASy Swiss-Prot
Match: Q07949 (Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PSR2 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16
Identity = 44/126 (34.92%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 151 KISHVTVFERPGLHEFLSQAAEFSELILFTAGLEGYARPLVDRIDSEGRFSLRLYRPSTV 210
           ++ +V V +RPG+ EFL++ ++  E+++FTA +  YA PL+D +D  G    RL+R +  
Sbjct: 260 QVHNVYVIKRPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGTIHHRLFREACY 319

Query: 211 STEYREHVKDLSCLHRDLSRVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVLLP 270
           + E   ++K+LS + R LS  +I+DN+P S++  P + +P   +  +   D++LLD+ +P
Sbjct: 320 NYE-GNYIKNLSQIGRPLSETIILDNSPASYIFHPQHAVPISSWF-SDTHDNELLDI-IP 379

Query: 271 LLKHLA 277
           LL+ L+
Sbjct: 380 LLEDLS 382

[Close]

BLAST of Sed0024785 vs. ExPASy TrEMBL
Match: A0A6J1I8E3 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470123 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.7e-153
Identity = 269/301 (89.37%), Postives = 288/301 (95.68%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           MAQ+GQ EVC PRSLQVW+ALIDWLSF  HII+QIVRGAPS AQILSYVGVRLPLLASS+
Sbjct: 1   MAQIGQAEVCVPRSLQVWQALIDWLSFFVHIIAQIVRGAPSWAQILSYVGVRLPLLASSS 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
           PSFKPLP+AEL LHQ+SA K+S L+DVDDGG++DRPLEKITVVLDLD+TL+CAYETSSLP
Sbjct: 61  PSFKPLPIAELSLHQLSAKKLSPLTDVDDGGSRDRPLEKITVVLDLDETLVCAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGLNWF+LECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEF+ELILFT
Sbjct: 121 AVFRTQATEAGLNWFQLECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFAELILFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCL RDLSRVVIIDNNPFS
Sbjct: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLRRDLSRVVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQPLNGIPCLPFSPAQPSD+QLLDVLLPLLKHLALE+DVR +LYEKFHMPEWF + GI
Sbjct: 241 FLLQPLNGIPCLPFSPAQPSDNQLLDVLLPLLKHLALEKDVRPILYEKFHMPEWFHIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. ExPASy TrEMBL
Match: A0A6J1CVM1 (CTD nuclear envelope phosphatase 1-like OS=Momordica charantia OX=3673 GN=LOC111014985 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 268/301 (89.04%), Postives = 284/301 (94.35%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           MAQ+GQTEVCAPRS+QVWRAL+DWLSF  HII QIVRGAPSLAQILSYVGVR PLLASS 
Sbjct: 1   MAQIGQTEVCAPRSVQVWRALVDWLSFFCHIIVQIVRGAPSLAQILSYVGVRFPLLASSG 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
            SFKPLPV+ELPLHQ SA KVSSLS VD GGTQDRPLEKITVVLDLD+TLICAYETSSLP
Sbjct: 61  SSFKPLPVSELPLHQFSATKVSSLSGVDVGGTQDRPLEKITVVLDLDETLICAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGLNWFELECVSSDKEYEGKPK+SHVTVFERPGLHEFL QAAEF+EL+LFT
Sbjct: 121 AVFRTQATEAGLNWFELECVSSDKEYEGKPKVSHVTVFERPGLHEFLRQAAEFAELVLFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSC+  DLSR+VIIDNNPFS
Sbjct: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCIQSDLSRIVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQPLNGIPC+PFSPAQPSD+QLL+VLLPLLK LALE+DVR VLYEKFHMPEWFQ+ GI
Sbjct: 241 FLLQPLNGIPCIPFSPAQPSDNQLLEVLLPLLKRLALEKDVRPVLYEKFHMPEWFQIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. ExPASy TrEMBL
Match: A0A6J1GAU0 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452319 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.6e-151
Identity = 267/301 (88.70%), Postives = 286/301 (95.02%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           MAQ+GQ EVC PRSLQVW+ALIDWLSF  HII+QIVRGAPS AQILSYVGVRLPLLASSA
Sbjct: 1   MAQIGQAEVCVPRSLQVWQALIDWLSFFVHIIAQIVRGAPSWAQILSYVGVRLPLLASSA 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
           PSFKPLP+AE+PLHQ+SA K+S  +D DDGG++D  LEKITVVLDLD+TL+CAYETSSLP
Sbjct: 61  PSFKPLPIAEIPLHQLSAKKLSPPTDGDDGGSRDCSLEKITVVLDLDETLVCAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGL+WF+LECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEF+ELILFT
Sbjct: 121 AVFRTQATEAGLDWFQLECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFAELILFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCL RDLSRVVIIDNNPFS
Sbjct: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLRRDLSRVVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQPLNGIPCLPFSPAQPSD+QLLDVLLPLLKHLALE+DVR VLYEKFHMPEWFQ+ GI
Sbjct: 241 FLLQPLNGIPCLPFSPAQPSDNQLLDVLLPLLKHLALEKDVRPVLYEKFHMPEWFQIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. ExPASy TrEMBL
Match: A0A5D3DN66 (CTD nuclear envelope phosphatase 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00790 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.6e-148
Identity = 257/301 (85.38%), Postives = 282/301 (93.69%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           M Q+GQTEVCAPRSLQVW+AL+DWL F FH+I QIVRGAPSL QILSY+G R PLL SSA
Sbjct: 1   MEQIGQTEVCAPRSLQVWQALMDWLCFFFHVIVQIVRGAPSLPQILSYIGFRFPLLPSSA 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
           PSFKPLP AELPLHQ S  K+SSL+D+DDGG QDRPLEKITVVLDLD+TL+CAYETSSLP
Sbjct: 61  PSFKPLPAAELPLHQFSTKKISSLNDLDDGGGQDRPLEKITVVLDLDETLVCAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGLNWFELECVSSDKE EGKPKIS+VTVFERPGLHEFLSQAAEF+ELILFT
Sbjct: 121 AVFRTQATEAGLNWFELECVSSDKEVEGKPKISYVTVFERPGLHEFLSQAAEFAELILFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYA+PLVDRID+EGRFS RLYRPSTVSTEYREHVKDLSC+ RDLSRVVIIDNNPFS
Sbjct: 181 AGLEGYAKPLVDRIDTEGRFSHRLYRPSTVSTEYREHVKDLSCIQRDLSRVVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQP+NGIPC+PFSPAQP+D+QLL+VLLPLLKHLALE+DVR +LYE+FHMPEWFQ+ GI
Sbjct: 241 FLLQPMNGIPCIPFSPAQPADNQLLEVLLPLLKHLALEKDVRPILYERFHMPEWFQIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. ExPASy TrEMBL
Match: E5GBF3 (FCP1 homology domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.6e-148
Identity = 257/301 (85.38%), Postives = 282/301 (93.69%), Query Frame = 0


Query: 1   MAQLGQTEVCAPRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASSA 60
           M Q+GQTEVCAPRSLQVW+AL+DWL F FH+I QIVRGAPSL QILSY+G R PLL SSA
Sbjct: 1   MEQIGQTEVCAPRSLQVWQALMDWLCFFFHVIVQIVRGAPSLPQILSYIGFRFPLLPSSA 60

Query: 61  PSFKPLPVAELPLHQISANKVSSLSDVDDGGTQDRPLEKITVVLDLDDTLICAYETSSLP 120
           PSFKPLP AELPLHQ S  K+SSL+D+DDGG QDRPLEKITVVLDLD+TL+CAYETSSLP
Sbjct: 61  PSFKPLPAAELPLHQFSTKKISSLNDLDDGGGQDRPLEKITVVLDLDETLVCAYETSSLP 120

Query: 121 AIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQAAEFSELILFT 180
           A+F TQATEAGLNWFELECVSSDKE EGKPKIS+VTVFERPGLHEFLSQAAEF+ELILFT
Sbjct: 121 AVFRTQATEAGLNWFELECVSSDKEVEGKPKISYVTVFERPGLHEFLSQAAEFAELILFT 180

Query: 181 AGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLSRVVIIDNNPFS 240
           AGLEGYA+PLVDRID+EGRFS RLYRPSTVSTEYREHVKDLSC+ RDLSRVVIIDNNPFS
Sbjct: 181 AGLEGYAKPLVDRIDTEGRFSHRLYRPSTVSTEYREHVKDLSCIQRDLSRVVIIDNNPFS 240

Query: 241 FLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKFHMPEWFQMQGI 300
           FLLQP+NGIPC+PFSPAQP+D+QLL+VLLPLLKHLALE+DVR +LYE+FHMPEWFQ+ GI
Sbjct: 241 FLLQPMNGIPCIPFSPAQPADNQLLEVLLPLLKHLALEKDVRPILYERFHMPEWFQIHGI 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Sed0024785 vs. TAIR 10
Match: AT3G55960.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 347.4 bits (890), Expect = 1.1e-95
Identity = 184/312 (58.97%), Postives = 229/312 (73.40%), Query Frame = 0


Query: 1   MAQLGQTEVC-APRSLQVWRALIDWLSFVFHIISQIVRGAPSLAQILSYVGVRLPLLASS 60
           MA+L Q +V  +PRS QVW+ L++WL+F + I  QI+R           VG   PLL+SS
Sbjct: 1   MAELTQADVVYSPRSFQVWKTLVNWLAFFYQIFLQILRA----------VGYH-PLLSSS 60

Query: 61  APS----FKPLPVAELPLHQISAN------KVSSLSDVDDGGTQDRPLEKITVVLDLDDT 120
           A +    FKPLP  EL L + S +        ++ SD    G + R  +++ VVLDLD+T
Sbjct: 61  AKASADGFKPLPAIEL-LDRASESPTTVEIAATTTSDSCSDGARSR-FQRLKVVLDLDET 120

Query: 121 LICAYETSSLPAIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVFERPGLHEFLSQ 180
           L+CAYETSSLPA    QA EAGL WFELEC+S+DKEY+GKPKI++VTVFERPGLHEFL Q
Sbjct: 121 LVCAYETSSLPAALRNQAIEAGLKWFELECLSTDKEYDGKPKINYVTVFERPGLHEFLEQ 180

Query: 181 AAEFSELILFTAGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHVKDLSCLHRDLS 240
            +EF++LILFTAGLEGYARPLVDRID+    + RLYRPSTVST+YR+HVKDL    +++ 
Sbjct: 181 LSEFADLILFTAGLEGYARPLVDRIDTRKVLTNRLYRPSTVSTQYRDHVKDLLSTSKNMC 240

Query: 241 RVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLALEEDVRRVLYEKF 300
           R VI+DNNPFSFLLQP NGIPC+ FS  QP+D QLLDV+LPLLK L+ E+DVR  LY++F
Sbjct: 241 RTVIVDNNPFSFLLQPSNGIPCIAFSAGQPNDTQLLDVILPLLKQLSEEDDVRPTLYDRF 299

Query: 301 HMPEWFQMQGIP 302
            MPEWF+ QGIP
Sbjct: 301 RMPEWFEKQGIP 299

[Close]

BLAST of Sed0024785 vs. TAIR 10
Match: AT1G29780.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 4.5e-20
Identity = 67/185 (36.22%), Postives = 101/185 (54.59%), Query Frame = 0


Query: 99  KITVVLDLDDTLICAYETSSLPAIFCTQATEAGLNWFELECVSSDKEYEGKPKISHVTVF 158
           K T++LDLD+TL+  + T+ LP          G+    +  V  ++E      I  + V 
Sbjct: 49  KRTIILDLDETLV--HATTHLP----------GVKHDFMVMVKMERE------IMPIFVV 108

Query: 159 ERPGLHEFLSQAAEFSELILFTAGLEGYARPLVDRIDSEGRFSLRLYRPSTVSTEYREHV 218
           +RPG+ EFL +  E  ++++FTAGLE YA  ++D++D  G  S RLYR S       ++V
Sbjct: 109 KRPGVTEFLERLGENYKVVVFTAGLEEYASQVLDKLDKNGVISQRLYRDSCTEVN-GKYV 168

Query: 219 KDLS-CLHRDLSRVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVLLPLLKHLAL 278
           KDLS  + +DL   +I+D+NP S+ LQP NG+P   F       DQ L  L+  L+    
Sbjct: 169 KDLSLVVGKDLRSALIVDDNPSSYSLQPENGVPIKAF--VDDLKDQELLNLVEFLESCYA 212

Query: 279 EEDVR 283
            ED+R
Sbjct: 229 YEDMR 212

[Close]

BLAST of Sed0024785 vs. TAIR 10
Match: AT4G18140.3 (SCP1-like small phosphatase 4b )

HSP 1 Score: 89.4 bits (220), Expect = 5.5e-18
Identity = 70/203 (34.48%), Postives = 107/203 (52.71%), Query Frame = 0


Query: 93  QDRPLEK-ITVVLDLDDTLICAYETSSLPAIFCTQATEAGLNWFELECVSSDKEYEGKPK 152
           +D P  K +T+VLDLD+TL+     S+L                   C  +D  +     
Sbjct: 261 RDSPKRKAVTLVLDLDETLV----HSTLEV-----------------CRDTDFSFRVTFN 320

Query: 153 ISHVTVF--ERPGLHEFLSQAAEFSELILFTAGLEGYARPLVDRIDSEGRF-SLRLYRPS 212
           +   TV+  +RP L+ FL +  E   +++FTA    YA  L+D +D +G+F S R YR S
Sbjct: 321 MQENTVYVKQRPYLYRFLERVVELFHVVIFTASHSIYASQLLDILDPDGKFVSQRFYRDS 380

Query: 213 TVSTEYREHVKDLSCLHRDLSRVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVL 272
            + ++   + KDL+ L  DL++V I+DN P  + LQ  NGIP   +    P+DD L+  L
Sbjct: 381 CILSD-GIYTKDLTVLGLDLAKVAIVDNCPQVYRLQINNGIPIKSWYD-DPTDDGLI-TL 439

Query: 273 LPLLKHLALEEDVRRVLYEKFHM 292
           LP L+ LA   DVR V+ ++F +
Sbjct: 441 LPFLETLADANDVRPVIAKRFDL 439

[Close]

BLAST of Sed0024785 vs. TAIR 10
Match: AT4G18140.1 (SCP1-like small phosphatase 4b )

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18
Identity = 70/201 (34.83%), Postives = 106/201 (52.74%), Query Frame = 0


Query: 93  QDRPLEK-ITVVLDLDDTLICAYETSSLPAIFCTQATEAGLNWFELECVSSDKEYEGKPK 152
           +D P  K +T+VLDLD+TL+     S+L                   C  +D  +     
Sbjct: 261 RDSPKRKAVTLVLDLDETLV----HSTLEV-----------------CRDTDFSFRVTFN 320

Query: 153 ISHVTVF--ERPGLHEFLSQAAEFSELILFTAGLEGYARPLVDRIDSEGRF-SLRLYRPS 212
           +   TV+  +RP L+ FL +  E   +++FTA    YA  L+D +D +G+F S R YR S
Sbjct: 321 MQENTVYVKQRPYLYRFLERVVELFHVVIFTASHSIYASQLLDILDPDGKFVSQRFYRDS 380

Query: 213 TVSTEYREHVKDLSCLHRDLSRVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVL 272
            + ++   + KDL+ L  DL++V I+DN P  + LQ  NGIP   +    P+DD L+  L
Sbjct: 381 CILSD-GIYTKDLTVLGLDLAKVAIVDNCPQVYRLQINNGIPIKSWYD-DPTDDGLI-TL 437

Query: 273 LPLLKHLALEEDVRRVLYEKF 290
           LP L+ LA   DVR V+ ++F
Sbjct: 441 LPFLETLADANDVRPVIAKRF 437

[Close]

BLAST of Sed0024785 vs. TAIR 10
Match: AT4G18140.2 (SCP1-like small phosphatase 4b )

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18
Identity = 70/201 (34.83%), Postives = 106/201 (52.74%), Query Frame = 0


Query: 93  QDRPLEK-ITVVLDLDDTLICAYETSSLPAIFCTQATEAGLNWFELECVSSDKEYEGKPK 152
           +D P  K +T+VLDLD+TL+     S+L                   C  +D  +     
Sbjct: 261 RDSPKRKAVTLVLDLDETLV----HSTLEV-----------------CRDTDFSFRVTFN 320

Query: 153 ISHVTVF--ERPGLHEFLSQAAEFSELILFTAGLEGYARPLVDRIDSEGRF-SLRLYRPS 212
           +   TV+  +RP L+ FL +  E   +++FTA    YA  L+D +D +G+F S R YR S
Sbjct: 321 MQENTVYVKQRPYLYRFLERVVELFHVVIFTASHSIYASQLLDILDPDGKFVSQRFYRDS 380

Query: 213 TVSTEYREHVKDLSCLHRDLSRVVIIDNNPFSFLLQPLNGIPCLPFSPAQPSDDQLLDVL 272
            + ++   + KDL+ L  DL++V I+DN P  + LQ  NGIP   +    P+DD L+  L
Sbjct: 381 CILSD-GIYTKDLTVLGLDLAKVAIVDNCPQVYRLQINNGIPIKSWYD-DPTDDGLI-TL 437

Query: 273 LPLLKHLALEEDVRRVLYEKF 290
           LP L+ LA   DVR V+ ++F
Sbjct: 441 LPFLETLADANDVRPVIAKRF 437

The following BLAST results are available for this feature:

BLAST of Sed0024785 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539290.1	3.2e-153	89.70	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like...	[more]
XP_022971384.1	5.5e-153	89.37	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like...	[more]
KAG7027896.1	2.7e-152	89.37	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Cuc...	[more]
XP_022145564.1	3.0e-151	89.04	CTD nuclear envelope phosphatase 1-like [Momordica charantia]	[more]
XP_022948744.1	1.1e-150	88.70	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like...	[more]

BLAST of Sed0024785 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9D880	3.5e-17	42.64	Mitochondrial import inner membrane translocase subunit TIM50 OS=Mus musculus OX...	[more]
Q1RMV9	1.3e-16	31.22	CTD nuclear envelope phosphatase 1 OS=Bos taurus OX=9913 GN=CTDNEP1 PE=2 SV=1	[more]
Q9XYL0	1.3e-16	37.77	Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum OX=4468...	[more]
O95476	3.0e-16	30.77	CTD nuclear envelope phosphatase 1 OS=Homo sapiens OX=9606 GN=CTDNEP1 PE=1 SV=2	[more]
Q07949	3.0e-16	34.92	Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...	[more]

BLAST of Sed0024785 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I8E3	2.7e-153	89.37	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like...	[more]
A0A6J1CVM1	1.5e-151	89.04	CTD nuclear envelope phosphatase 1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1GAU0	5.6e-151	88.70	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like...	[more]
A0A5D3DN66	2.6e-148	85.38	CTD nuclear envelope phosphatase 1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
E5GBF3	2.6e-148	85.38	FCP1 homology domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE...	[more]

BLAST of Sed0024785 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55960.1	1.1e-95	58.97	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT1G29780.1	4.5e-20	36.22	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT4G18140.3	5.5e-18	34.48	SCP1-like small phosphatase 4b	[more]
AT4G18140.1	7.2e-18	34.83	SCP1-like small phosphatase 4b	[more]
AT4G18140.2	7.2e-18	34.83	SCP1-like small phosphatase 4b	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004274	FCP1 homology domain	SMART	SM00577	forpap2	coord: 98..261 e-value: 1.1E-49 score: 181.0
IPR004274	FCP1 homology domain	PFAM	PF03031	NIF	coord: 101..282 e-value: 9.4E-40 score: 135.9
IPR004274	FCP1 homology domain	PROSITE	PS50969	FCP1	coord: 95..275 score: 36.504158
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 91..289 e-value: 1.8E-44 score: 153.4
IPR011948	Dullard phosphatase domain, eukaryotic	TIGRFAM	TIGR02251	TIGR02251	coord: 99..284 e-value: 1.0E-48 score: 163.3
None	No IPR available	PANTHER	PTHR12210	NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED	coord: 11..300
None	No IPR available	PANTHER	PTHR12210:SF143	SUBFAMILY NOT NAMED	coord: 11..300
None	No IPR available	CDD	cd07521	HAD_FCP1-like	coord: 99..251 e-value: 5.19734E-45 score: 147.357
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 98..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024785.1	Sed0024785.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0016791	phosphatase activity