Sed0024706 (gene) Chayote v1

Overview
NameSed0024706
Typegene
OrganismSechium edule (Chayote v1)
Descriptioncopper-transporting ATPase PAA1, chloroplastic-like
LocationLG06: 12771827 .. 12777853 (-)
RNA-Seq ExpressionSed0024706
SyntenySed0024706
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTACTTCCCATGTGCACTAAAAAAAATATTAAAAAAAAAGAAAAAACATGAGGGACATAGAAACGCCACCAGTGGAGTGGTTGACCAAACTCCTCCTCCCATGGCTCATCTTTTCCATTTTCATCTGTAAGTGGGAGAGGAGAGCAGCAGATAGGGTCAGATTCCTTTCATCCATGGCTTCCTTCCTCTCTCTTACGGCCTCCATTGCGCCTCTCTCCACTCTACCCACCATCGCCTCCTTTTCCCCTTTCCCCGCCCTTCACATGCCCGCCATTTCCTTCTCCCTACGCGCTGCTCTTTCTCCCATCCGCCGTCGCTCCGAATTCCTCTCCATCTCCGCCTCCGGCAACGGCAATGGCGGCCTCCGAGGAGAGAGCGGCGGCGACGGCGACGATGGTGGACCTGACGGCGGCGGTGCCGACTCCCGATCCCTTGCTGGAGAATCTGAGCAAGATTCCTCGCCGTCCGGAGACGTGATTGTTCTTGATGTTCGAGTGCGAGACCAGCTCTGCCCCGTTTAGGTTTTCGATTGGTTCTAATTTTGATCGGTTTTCTGCTCTTTGTAACAGGGGATGACGTGCAAGGGATGTTCCGCGAGCGTCCAGAGGATTCTTGAAACTCAGGTGGTTTTCCTTATTCTTTGGTCCTTGTTCCTCATCCCTAAATATTTACCCTGCTGCTTCAAAATTTGTGTGCAAACTATGTATCCTATAACCTATTTTCTCTTGTTTCATTGATATCTACCTAACAATCGTACATTGAAGTGAGAAAGATACAATTGTATTGCATTCGAGTATAGAAATGAGTTCTTTCGGCCCGTTGGATAACCATTTTGTTTTTCGCTTTTTGTTTTTGAAATTTAAGCCTATAACAACTATCTTACCATAACTTTTTTCTTATTTGGATATCTACATCTTACCTATATTTTAATAAACAAAATCAAAATTTGGAAACAAAAAAAAGTTAGCTTCCAAAAAAGCTTGTTTTTGTTTTTGAAATTTGGTTAGTATTCACCTACTTTCTTAAGGAAATATAAATATATTGTTGGAAAGATGAGTTTGAGTAGAAATAGGCTTTCATAAACAAAAAACAAAAAACCAAATGACTATCAAACGGGGCCTTCACGTTTCTAATTCTAGTTCTCCAATTCTGGTTGAAGAACATCCATATATGGAACATTAAATTTAACCTACCAGCTTGCTTAAAGTTTGGAATTGACTGCGATTTAATATGGTATTAAAGCAACACAATTTTGCAACTCAGGGCAAGAATATGAAGGATAACAATGTGGAAAATAAGATCAAGAATTTTTCTCTGCTCTATGAATAACTCTTCGTTGTTCTTTCTTCTCTTTGTATTATGGACAGCCGCAAGTAGCACATGCTAGTGTTGACCTTGCTTCAGAGACAGCAGTTGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTTGGACCCGCACTTGCGAAGCATTTGACTACTTGTGGTTTTTCTTCTAATGTTCAAGGTCAGCATTATAAACTCATAAGTCATAACTCACAAGTCACAACCATATCTGATTTATTCTGTCATCTTCTTCTTCACTTTTGTTGGCTATCAATATTCCCACTTTCAGTTCTTAAGGTTGCAAGGTTCCTGCCTGAAAAGCATGCTACAATTTGATAACGTTGTATTCCTCATTATCTTTTTTGTTCACAAATTACACGGAGAAAGTGATGTGATGTCTTATGGCAGGTTCCTATGCAATCACTAATGGGATTTTGGGTTCTGAATCTTAGAATTTTTTTAGTTTATTACATTACACTTGGATTCGTTTAGTTCAATATCCTAGACCATCATGGTTGACCTAGTGGTTAAATAAAGGCATGAGAATCTTTGAATGCTTGGAGGAATGAGTTGCATTTATGGTGACTACTTACTTAAGAATTAATTTTCTATGAATTACCTTGATAATCAGTTGTAGTAAAGTTGGTTGGTTGTCCCATAAAAATAGTTGAGGTGTAAGTAAGTTGGTGCAGACACTCACAAATATAAAAATTAACCACTACACTAAGATTCGCCATACATGTTGACTAGGATTTTGGTTCAACAACCTCTACAAAGGTAAACTTAATATTTGACCTCTTTAAAATGAATTATGTCCCCAACGGGTGGCACAATGGTTGAAAACTTGGGATTTGAAGGTATGCTCTCTTCAAAGTCCCAGGTTCGAGACTTACTTGTGGCATAACTCCTTCGATGTCTCCCGGTGCCTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAAAAAAGAATTCTTGTTGTCTTCTTGTGCTTGAGAAATTTTCTTTCCAGACATACATACTTCAGTCTGATTGCTTTTCATTTTACACTTGTGATTCTATTTTATTCCTACATAATTATTATTATTTTTTTTTTGAAAAAAATCCTACATAATTATTTTGATAGGAAACAAAAGCAATTTCATTGATGATTGATTTAGTGAGAATGTTACAAAGACCTATTGAAACGAGCGATTAGATAGAAGGAAAGGAGCAAAGGGCAAAAAAATAGAGGAAGAGTATGGCAATTTAAGCCTCATACACCAATGATATGGAGAGAGATCTCGAATGAGATAAAGATACATAAAAGTGGACTATTCATTGATGAATTGTTGGGGGAGGCTTGCAAGTCAATGTCGTCGGTGAAGAAGAAAGAAAAGCCACTAGATTATTCCTTGATAAACTGTGCTCAATATGAACATGTGAGGATGTCGCTGGAAGATGTTGATGAAGAAGATGGAAGGAGTCTTTGTTTATGATGCTAGATGATGGCTGGCGAAGAGGAAAAAACCTGATGACTCAAAAGATGCTGGCTATAGAAGACCCATCTTTGGTAGTTGACAGTCACCGGTGGAAATGTCAAAACCACCGTTTCTATGCCTTGCGCTCAACAAAGAAAAACCAGAATGAAACCGCCATTGGTCAGAAAAGATGAAAGAAAAAGCAGGGTAGTTATGGACGGAGGTTGTATGTTGGGGTAGAGAGAAAAAAGAGCAATGCTAGGCCACTGGGGAAAAGCAGTCGCAGTTGGGTTCTAGTGGGTGAAGAAGCGAGTTTGGTGAAGCACACATGAGCAAGAGATAACTTAGTGGCGACTGGGTTTGATTGGGTAAGAAGGATAAGATGGCGAGTTTGGTGAAGAACACACATGAGCAAGAGATAACATAGCGACGACTGGGTTTGATTGGGTAAGAAGGATAAGATGGTCATGAGATAATGCTTGTGGTAACTTCACTAGCGTCAAAGGAGGTAGAACAACCGAGATGGTGGAGAAAAAGAGATACTGAAGCACCGTTAGATGTAACCTTTCCTCCTCCCTAGTGCTGGTGGAGGAAAGAATCGCAACTAGGATTAGGGTTTTTTGTTGAGAGGAAGTTTAGAGAGAGGTTTTTTCACGAAGTTGGTAACTTCATGTTATTCACGCATAATTAAAAAATTCAGTTGAAGATTCTTTGAACTATACAATTTGAGACAAATGAGTTCCACAATATTAATCCCACTGATCTCTTATTAGTTAATACATCCACGGATATCTAAATAAAAAAAGGTTCGTATGCCTGGGAAGATCACCTTTGGTTCAATTGAAAACAAATATGCACTTTTGGATTTGAGTTTTTTAGGCCCCGTTTGATAATCATTTGGTTTTTTGTTTTTGGTTTTTGAAATTTAAGTCTATTCTTACTCAAATTTCCTACCATGTGTTTCATATTTCCTACAATCTATTCATCTTTCCTTAAGAAAGTAGGTCAATGCTAACCAACTTTTAAAAACAAAAACAAACTTTTGGAAGCTACTTTTTTTTTGTTTCCAAATTTTGGTTTAGTTTCTACAAATATAGGTGAGAGGTAGATATCCAAGTAAGAAAAAACATATATAAGATAGTTGTTGTAGGCTTAAATTTCAAAAACCAAAAATAAAAAACTAAGGCCCCGTTTGATAACCATTTGGTTTTTTGTTTTTGGTTTATGAAATTTAAGCTTATTTCAACTCAAAATCTCCTACCATGTGCTCTATCTTTCCTACAATGTATTCATATTTCCTTAAGAAAGTAGGTGAATACTAACCAAATTTCAAAAACAAAAACAAGCTTTTGGAAGCTACTTTTTTTTGTTTCCAAATTTTGGTTTTGTTTATTAAAATATAGGTAAGATGTAGATATCCAAATAAGAAAAAAAAAGGTTATAGTAAGGTAGTTGTTGTAGGCTTAAATTTCATAAACAAAAAACGAAAAACAAAATGGTAATCAAACGGTGCCTAAATGATTATCAAACGGTGTTTATGTTTGCTGGAAGGGCCGAAAATGAGTAAAGTTAGCAGGCTTCTATGGACCAATGTTGTCAAAGCTCTCCTATATGAATTGTGGTGGGAGATGAATCAAAGAATCTTCCAAGATAAGCATCTCCCTTGGCTTCAGAGGATTGATTTGGCAAAGCTTAAAGCTTCTTCTTGGTGCTCTTTGGACAAATCTTTTGTTGGCTACTCTATCCAAAATATCTCTGCCAATTGGGCAGCTTTCATTTTTGTCCAAGCCTAGTTCATTGGCTGTTCTTCTTGTTTTTTATTTCTGCACTTCTATTTCAAATCTTTTATGTTTATGCCTTTTGGGTTGTCTCTGTCATATCCTCTTTTCATATTCTTGAGAGAATTTGCGTTGTATAGCAACTTTTTTACCACAGTTTACAATTATAATACATTTTTAAAAATAATTCTTTTATAGCAAATTCTGCCATTTAAAAAAAAAAAAAATTATTTACCTTTTTTATAGAAGACTTTGATAGAATCTATCATTCTCTAGTGATGGAAGTCTATCAATTTTATCAGTGATTGATTCTATCGGCTCTTATTGATAGACTCTTGATAGAATCTGATGGAAGTCTATCAATTTACTTTATTTATTAGTAATTGATTCAATCACCCTTTATCGATAGAATTTATCAGTATAAAGTCTATCAATTTACAATTTTTGCTATATGTGCAAATATTTTCATTATTGTGCTATTCATGTAATATTTTATCCATTTTGTAATATACATGCAAAAGCCCCTATTCTTAATGAAAATTTGTCTCATTTAAAAAAAAATATTAAACTGAGCCTTAATTTCCTAGGTTCTGAACACAAAAGATGTTTCTAATGATAGCTGCACTCTTTCTTACTGCTATCTTCCATTTTTAGGGAGGAGCGTGATGCTTGTTAAAATCTTGAAATAAAATATATTTGCTGGTCTTGAAGTGTTAAATTTTTTGTTGTTCAAATTGTTATCTGATTCACACTGATGGGTTATAAATTTAGGCATTGAACTCATCAACTAGTAAATATAGTTTCTTGAGGAGAGGTACATAGAAGAATAGAGAACAGTAATTCATTCTTTCAAGATAAAAGTAGAACCAAACACACTTGCACATGTGTTCTCTCTCTCAGGATTTCTGTAGTTCCCATGGCTTATGTGAACAATGCTGGTTACTTGCAGGTCAAGGAGCTATAGGACGAGATGTTTCGTTATAGAAATGCAAAAAAAATAAAATAAAAGGTTCAGTTCAAATGCAAATTTTACAGTTGCAGCCTTATGACAAGATAGCCATTTTCAAAACTAGTTGCCTCATTCGTTGACTCTGAAATCGAACTTGACTGTAGAAGCCGAAAAGCAGAGTTTGATATGTTGTATCAATAAACTGCCAGATTTAGCAATGAACGGTGTCAACTGTCCAGTTGTCTGGATGCCCTGGGGAGTGGAAATCTTTTGTATACTGTTAGAAGATTGTCATGTTTCAGGTATTTTACGAATACGAGTAATATTCCTTAGAAGTTGATTACAAGCTATGGTGTATGTTTGGTTGTTTTTAATGTGCAATGGACCTTATTAGCTGCTATGCTACATGTTTATGATTATTAGCATCTGAAAAATGTTCGCTAGTATATTAATTATGTATTATTGTGATAGGCAAGTGCAAAAGGAGCTCTTAT

mRNA sequence

ATCTACTTCCCATGTGCACTAAAAAAAATATTAAAAAAAAAGAAAAAACATGAGGGACATAGAAACGCCACCAGTGGAGTGGTTGACCAAACTCCTCCTCCCATGGCTCATCTTTTCCATTTTCATCTGTAAGTGGGAGAGGAGAGCAGCAGATAGGGTCAGATTCCTTTCATCCATGGCTTCCTTCCTCTCTCTTACGGCCTCCATTGCGCCTCTCTCCACTCTACCCACCATCGCCTCCTTTTCCCCTTTCCCCGCCCTTCACATGCCCGCCATTTCCTTCTCCCTACGCGCTGCTCTTTCTCCCATCCGCCGTCGCTCCGAATTCCTCTCCATCTCCGCCTCCGGCAACGGCAATGGCGGCCTCCGAGGAGAGAGCGGCGGCGACGGCGACGATGGTGGACCTGACGGCGGCGGTGCCGACTCCCGATCCCTTGCTGGAGAATCTGAGCAAGATTCCTCGCCGTCCGGAGACGTGATTGTTCTTGATGTTCGAGGGATGACGTGCAAGGGATGTTCCGCGAGCGTCCAGAGGATTCTTGAAACTCAGCCGCAAGTAGCACATGCTAGTGTTGACCTTGCTTCAGAGACAGCAGTTGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTTGGACCCGCACTTGCGAAGCATTTGACTACTTGTGGTTTTTCTTCTAATGTTCAAGGTCAAGGAGCTATAGGACGAGATGTTTCGTTATAGAAATGCAAAAAAAATAAAATAAAAGGTTCAGTTCAAATGCAAATTTTACAGTTGCAGCCTTATGACAAGATAGCCATTTTCAAAACTAGTTGCCTCATTCGTTGACTCTGAAATCGAACTTGACTGTAGAAGCCGAAAAGCAGAGTTTGATATGTTGTATCAATAAACTGCCAGATTTAGCAATGAACGGTGTCAACTGTCCAGTTGTCTGGATGCCCTGGGGAGTGGAAATCTTTTGTATACTGTTAGAAGATTGTCATGTTTCAGGTATTTTACGAATACGAGTAATATTCCTTAGAAGTTGATTACAAGCTATGGTGTATGTTTGGTTGTTTTTAATGTGCAATGGACCTTATTAGCTGCTATGCTACATGTTTATGATTATTAGCATCTGAAAAATGTTCGCTAGTATATTAATTATGTATTATTGTGATAGGCAAGTGCAAAAGGAGCTCTTAT

Coding sequence (CDS)

ATGAGGGACATAGAAACGCCACCAGTGGAGTGGTTGACCAAACTCCTCCTCCCATGGCTCATCTTTTCCATTTTCATCTGTAAGTGGGAGAGGAGAGCAGCAGATAGGGTCAGATTCCTTTCATCCATGGCTTCCTTCCTCTCTCTTACGGCCTCCATTGCGCCTCTCTCCACTCTACCCACCATCGCCTCCTTTTCCCCTTTCCCCGCCCTTCACATGCCCGCCATTTCCTTCTCCCTACGCGCTGCTCTTTCTCCCATCCGCCGTCGCTCCGAATTCCTCTCCATCTCCGCCTCCGGCAACGGCAATGGCGGCCTCCGAGGAGAGAGCGGCGGCGACGGCGACGATGGTGGACCTGACGGCGGCGGTGCCGACTCCCGATCCCTTGCTGGAGAATCTGAGCAAGATTCCTCGCCGTCCGGAGACGTGATTGTTCTTGATGTTCGAGGGATGACGTGCAAGGGATGTTCCGCGAGCGTCCAGAGGATTCTTGAAACTCAGCCGCAAGTAGCACATGCTAGTGTTGACCTTGCTTCAGAGACAGCAGTTGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTTGGACCCGCACTTGCGAAGCATTTGACTACTTGTGGTTTTTCTTCTAATGTTCAAGGTCAAGGAGCTATAGGACGAGATGTTTCGTTATAG

Protein sequence

MRDIETPPVEWLTKLLLPWLIFSIFICKWERRAADRVRFLSSMASFLSLTASIAPLSTLPTIASFSPFPALHMPAISFSLRAALSPIRRRSEFLSISASGNGNGGLRGESGGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTCKGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGFSSNVQGQGAIGRDVSL
Homology
[Close]
BLAST of Sed0024706 vs. NCBI nr
Match: XP_038887264.1 (copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 6.6e-58
Identity = 137/196 (69.90%), Postives = 157/196 (80.10%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIA-SFSPFPALH------MPAISFSLRAALSPIRRRSEFLS 102
           M S +SL AS APLSTL TI+ SFS     H      +  +SFSLRA+L P+ RR +F+S
Sbjct: 1   MDSAISLMASNAPLSTLSTISRSFSSLNFTHPTSISPISTLSFSLRASLPPLHRRQKFIS 60

Query: 103 ISASGNGNGGLRGES--GGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTC 162
             +SGNGNGG+RGE+  GG GDDGGPDG   DS+ LAGE++ D++ S DVIVL V GMTC
Sbjct: 61  NFSSGNGNGGVRGENGGGGGGDDGGPDGADVDSKLLAGEADDDATLSADVIVLGVGGMTC 120

Query: 163 KGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGF 222
           KGCSASV+RILE+QPQV+HASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTTCGF
Sbjct: 121 KGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGF 180

Query: 223 SSNVQGQGAIGRDVSL 230
           SS VQGQGAIG DVSL
Sbjct: 181 SSKVQGQGAIGGDVSL 196

[Close]
BLAST of Sed0024706 vs. NCBI nr
Match: XP_022963522.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 232.6 bits (592), Expect = 3.3e-57
Identity = 138/196 (70.41%), Postives = 153/196 (78.06%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIA-SFSPFPALH------MPAISFSLRAALSPIRRRSEFLS 102
           M S LS+ AS APL TL TI  SFS     H      +  +SFSLRAA+ P+ RR +F+S
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPISTLSFSLRAAVPPLHRRHKFIS 60

Query: 103 ISASGNGNGGLRGES--GGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTC 162
            S+SGNGNGG+RGES  GG GDDGGPDGG   S  LAGE+E D++ S D IVL V GMTC
Sbjct: 61  NSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMTC 120

Query: 163 KGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGF 222
           KGCSASV+RILE+QPQV+HASVDLASETAVVWP AEAKITPNWREELG ALAKHLTTCGF
Sbjct: 121 KGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGF 180

Query: 223 SSNVQGQGAIGRDVSL 230
           SS VQGQGAIG DVSL
Sbjct: 181 SSKVQGQGAIGGDVSL 196

[Close]
BLAST of Sed0024706 vs. NCBI nr
Match: XP_023553917.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553918.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553920.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.8 bits (582), Expect = 4.8e-56
Identity = 137/195 (70.26%), Postives = 151/195 (77.44%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIASFSPFPALHMPAI------SFSLRAALSPIRRRSEFLSI 102
           M S LSL AS APLST+    SFS     H  +I      SFSLRAA+ P+ RR +F+S 
Sbjct: 1   MDSALSLMASNAPLSTI--TRSFSTLYFTHSTSISPISTLSFSLRAAVPPLHRRHKFISN 60

Query: 103 SASGNGNGGLRGESGGDG--DDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTCK 162
           S+SGNGNGG+RGESGG G  DDGGPDGG   S  LAGE+E D++ S D IVL V GM CK
Sbjct: 61  SSSGNGNGGVRGESGGGGGDDDGGPDGGDVGSNLLAGEAEDDATLSADAIVLGVGGMRCK 120

Query: 163 GCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGFS 222
           GCSASV+RILE+QPQV+HASVDLASETAVVWP AEAKITPNWREELG ALAKHLTTCGFS
Sbjct: 121 GCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGFS 180

Query: 223 SNVQGQGAIGRDVSL 230
           S VQGQGAIG DVSL
Sbjct: 181 SKVQGQGAIGGDVSL 193

[Close]
BLAST of Sed0024706 vs. NCBI nr
Match: XP_022967629.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 8.1e-56
Identity = 136/196 (69.39%), Postives = 152/196 (77.55%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIA-SFSPFPALHMPAI------SFSLRAALSPIRRRSEFLS 102
           M S LS+ AS APL  L TI  SFS     H P+I      SFSLRAA+ P+ RR +F+S
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPISTLSFSLRAAVPPLHRRHKFIS 60

Query: 103 ISASGNGNGGLRGES--GGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTC 162
            S+SGNGNGG+RGES  GG GDDGGPDGG   S  L+GE+E D++ S D IVL V GMTC
Sbjct: 61  NSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMTC 120

Query: 163 KGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGF 222
           KGCSASV+RILE+QPQV++ASVDLASETAVVWP AEAKITPNWREELG ALAKHLTTCGF
Sbjct: 121 KGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGF 180

Query: 223 SSNVQGQGAIGRDVSL 230
           SS VQGQGAIG  VSL
Sbjct: 181 SSKVQGQGAIGGGVSL 196

[Close]
BLAST of Sed0024706 vs. NCBI nr
Match: XP_008455207.1 (PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-55
Identity = 131/190 (68.95%), Postives = 151/190 (79.47%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIASFSPFPALHMPAISFSLRAALSPIRRRSEFLSISASGNG 102
           M S +SL AS + LSTL TI   S      +  +SF LRAAL PI RR +F+S+ ASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 103 NGGLRGES---GGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTCKGCSAS 162
           NGG+RGES   GG GDDGGP+G   DS+ LAGE++ D++ S DVIV+ V GMTCKGC AS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 163 VQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGFSSNVQG 222
           V+RILE+QPQV+HASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTTCGFSS VQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

Query: 223 QGAIGRDVSL 230
           QGAIG DV+L
Sbjct: 181 QGAIGGDVTL 190

[Close]
BLAST of Sed0024706 vs. ExPASy Swiss-Prot
Match: Q9SZC9 (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.4e-28
Identity = 79/146 (54.11%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 79  SLRAALSP-IRRRSEFLSISA------SGNGNGGLRGESGGDGDDGGPDGGGADSRSLAG 138
           SL AA+ P IR R E LS S+      S  G  G  G +GG G  GG      DS+S  G
Sbjct: 76  SLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKLG 135

Query: 139 ESEQD--SSPSGDVIVLDVRGMTCKGCSASVQRILETQPQVAHASVDLASETAVVWPVAE 198
            +  D  S PS D+I+LDV GMTC GCSASV++ILE+QPQVA ASV+L +ETA+VWPV E
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPE 195

Query: 199 AKITPNWREELGPALAKHLTTCGFSS 216
           AK  P+W++ LG  LA HLT CGF S
Sbjct: 196 AKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]
BLAST of Sed0024706 vs. ExPASy Swiss-Prot
Match: B9DFX7 (Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-05
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 0 

Query: 137 SSPSGDVIVLDVRGMTCKGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNW 196
           S  S   I+LDV GM C GC A V+ +L +  +VA A V++ +ETA V    E ++T + 
Sbjct: 71  SITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADT 130

Query: 197 REELGPALAKHLTTCGFSS--NVQGQG 222
            E    +LAK LT  GF +   V G G
Sbjct: 131 AE----SLAKRLTESGFEAKRRVSGMG 153

[Close]
BLAST of Sed0024706 vs. ExPASy TrEMBL
Match: A0A6J1HFH1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 138/196 (70.41%), Postives = 153/196 (78.06%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIA-SFSPFPALH------MPAISFSLRAALSPIRRRSEFLS 102
           M S LS+ AS APL TL TI  SFS     H      +  +SFSLRAA+ P+ RR +F+S
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPISTLSFSLRAAVPPLHRRHKFIS 60

Query: 103 ISASGNGNGGLRGES--GGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTC 162
            S+SGNGNGG+RGES  GG GDDGGPDGG   S  LAGE+E D++ S D IVL V GMTC
Sbjct: 61  NSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMTC 120

Query: 163 KGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGF 222
           KGCSASV+RILE+QPQV+HASVDLASETAVVWP AEAKITPNWREELG ALAKHLTTCGF
Sbjct: 121 KGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGF 180

Query: 223 SSNVQGQGAIGRDVSL 230
           SS VQGQGAIG DVSL
Sbjct: 181 SSKVQGQGAIGGDVSL 196

[Close]
BLAST of Sed0024706 vs. ExPASy TrEMBL
Match: A0A6J1HX97 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.9e-56
Identity = 136/196 (69.39%), Postives = 152/196 (77.55%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIA-SFSPFPALHMPAI------SFSLRAALSPIRRRSEFLS 102
           M S LS+ AS APL  L TI  SFS     H P+I      SFSLRAA+ P+ RR +F+S
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPISTLSFSLRAAVPPLHRRHKFIS 60

Query: 103 ISASGNGNGGLRGES--GGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTC 162
            S+SGNGNGG+RGES  GG GDDGGPDGG   S  L+GE+E D++ S D IVL V GMTC
Sbjct: 61  NSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMTC 120

Query: 163 KGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGF 222
           KGCSASV+RILE+QPQV++ASVDLASETAVVWP AEAKITPNWREELG ALAKHLTTCGF
Sbjct: 121 KGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCGF 180

Query: 223 SSNVQGQGAIGRDVSL 230
           SS VQGQGAIG  VSL
Sbjct: 181 SSKVQGQGAIGGGVSL 196

[Close]
BLAST of Sed0024706 vs. ExPASy TrEMBL
Match: A0A6J1CKX0 (copper-transporting ATPase PAA1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111012241 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 5.1e-56
Identity = 134/196 (68.37%), Postives = 152/196 (77.55%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTL------PTIASF---SPFPALHMPAISFSLRAALSPIRRRSEF 102
           M S +SL AS  PLS+L      P    F   SP  A+H P +   LRAA+ P+ RR +F
Sbjct: 1   MDSAISLIASNLPLSSLNFRFSGPNFTHFTCISPISAIHSPTV--PLRAAVPPLHRRFKF 60

Query: 103 LSISASGNGNGGLRGESGGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTC 162
           +S  ASGNGNGG+R ESGG GDDGGPDGG A+S+ LA E+E D++ S DVIVLDV GMTC
Sbjct: 61  VSKFASGNGNGGVRDESGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTC 120

Query: 163 KGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGF 222
            GCSASV+RILE+QPQV+ ASVDLASETAVVWPVAEAKITPNWREELG ALAKHLTTCGF
Sbjct: 121 MGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGF 180

Query: 223 SSNVQGQGAIGRDVSL 230
           SS VQGQGA+G DVSL
Sbjct: 181 SSKVQGQGAVGGDVSL 194

[Close]
BLAST of Sed0024706 vs. ExPASy TrEMBL
Match: A0A1S3BZZ1 (copper-transporting ATPase PAA1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495426 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 5.1e-56
Identity = 131/190 (68.95%), Postives = 151/190 (79.47%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIASFSPFPALHMPAISFSLRAALSPIRRRSEFLSISASGNG 102
           M S +SL AS + LSTL TI   S      +  +SF LRAAL PI RR +F+S+ ASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRSSFTSISTISTLSFPLRAALPPIHRRQKFVSVFASGNG 60

Query: 103 NGGLRGES---GGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTCKGCSAS 162
           NGG+RGES   GG GDDGGP+G   DS+ LAGE++ D++ S DVIV+ V GMTCKGC AS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGMTCKGCCAS 120

Query: 163 VQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGFSSNVQG 222
           V+RILE+QPQV+HASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTTCGFSS VQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

Query: 223 QGAIGRDVSL 230
           QGAIG DV+L
Sbjct: 181 QGAIGGDVTL 190

[Close]
BLAST of Sed0024706 vs. ExPASy TrEMBL
Match: A0A0A0K5Z3 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062830 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54
Identity = 130/190 (68.42%), Postives = 149/190 (78.42%), Query Frame = 0 

Query: 43  MASFLSLTASIAPLSTLPTIASFSPFPALHMPAISFSLRAALSPIRRRSEFLSISASGNG 102
           M S +SL AS + LSTL + +  +      +  +SF  RAAL PI RR +F+SI ASGNG
Sbjct: 1   MDSAISLMASNSFLSTLSSTSVST------ISTLSFPRRAALPPIHRRQKFISIFASGNG 60

Query: 103 NGGLRGES---GGDGDDGGPDGGGADSRSLAGESEQDSSPSGDVIVLDVRGMTCKGCSAS 162
           NGG+RGES   GG GDDGGP G   DS+ LAGE++ D++ S DVIVL V GMTCKGC AS
Sbjct: 61  NGGVRGESGGGGGGGDDGGPKGSDVDSKLLAGEADDDATLSADVIVLGVEGMTCKGCCAS 120

Query: 163 VQRILETQPQVAHASVDLASETAVVWPVAEAKITPNWREELGPALAKHLTTCGFSSNVQG 222
           V+RILE+QPQV+HASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTTCGFSS VQG
Sbjct: 121 VKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQG 180

Query: 223 QGAIGRDVSL 230
           QGAIG DVSL
Sbjct: 181 QGAIGGDVSL 184

[Close]
BLAST of Sed0024706 vs. TAIR 10
Match: AT4G33520.1 (P-type ATP-ase 1 )

HSP 1 Score: 128.3 bits (321), Expect = 8.2e-30
Identity = 80/151 (52.98%), Postives = 98/151 (64.90%), Query Frame = 0 

Query: 79  SLRAALSP-IRRRSEFLSISA------SGNGNGGLRGESGGDGDDGGPDGGGADSRSLAG 138
           SL AA+ P IR R E LS S+      S  G  G  G +GG G  GG      DS+S  G
Sbjct: 76  SLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKLG 135

Query: 139 ESEQD--SSPSGDVIVLDVRGMTCKGCSASVQRILETQPQVAHASVDLASETAVVWPVAE 198
            +  D  S PS D+I+LDV GMTC GCSASV++ILE+QPQVA ASV+L +ETA+VWPV E
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPE 195

Query: 199 AKITPNWREELGPALAKHLTTCGFSSNVQGQ 221
           AK  P+W++ LG  LA HLT CGF S  +G+
Sbjct: 196 AKSVPDWQKSLGETLANHLTNCGFQSTPRGE 226

[Close]
BLAST of Sed0024706 vs. TAIR 10
Match: AT4G33520.2 (P-type ATP-ase 1 )

HSP 1 Score: 125.6 bits (314), Expect = 5.3e-29
Identity = 79/146 (54.11%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 79  SLRAALSP-IRRRSEFLSISA------SGNGNGGLRGESGGDGDDGGPDGGGADSRSLAG 138
           SL AA+ P IR R E LS S+      S  G  G  G +GG G  GG      DS+S  G
Sbjct: 76  SLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKLG 135

Query: 139 ESEQD--SSPSGDVIVLDVRGMTCKGCSASVQRILETQPQVAHASVDLASETAVVWPVAE 198
            +  D  S PS D+I+LDV GMTC GCSASV++ILE+QPQVA ASV+L +ETA+VWPV E
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPE 195

Query: 199 AKITPNWREELGPALAKHLTTCGFSS 216
           AK  P+W++ LG  LA HLT CGF S
Sbjct: 196 AKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]
BLAST of Sed0024706 vs. TAIR 10
Match: AT4G33520.3 (P-type ATP-ase 1 )

HSP 1 Score: 125.6 bits (314), Expect = 5.3e-29
Identity = 79/146 (54.11%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 79  SLRAALSP-IRRRSEFLSISA------SGNGNGGLRGESGGDGDDGGPDGGGADSRSLAG 138
           SL AA+ P IR R E LS S+      S  G  G  G +GG G  GG      DS+S  G
Sbjct: 76  SLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKLG 135

Query: 139 ESEQD--SSPSGDVIVLDVRGMTCKGCSASVQRILETQPQVAHASVDLASETAVVWPVAE 198
            +  D  S PS D+I+LDV GMTC GCSASV++ILE+QPQVA ASV+L +ETA+VWPV E
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPE 195

Query: 199 AKITPNWREELGPALAKHLTTCGFSS 216
           AK  P+W++ LG  LA HLT CGF S
Sbjct: 196 AKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]
BLAST of Sed0024706 vs. TAIR 10
Match: AT5G21930.1 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 0 

Query: 137 SSPSGDVIVLDVRGMTCKGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNW 196
           S  S   I+LDV GM C GC A V+ +L +  +VA A V++ +ETA V    E ++T + 
Sbjct: 71  SITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADT 130

Query: 197 REELGPALAKHLTTCGFSS--NVQGQG 222
            E    +LAK LT  GF +   V G G
Sbjct: 131 AE----SLAKRLTESGFEAKRRVSGMG 153

[Close]
BLAST of Sed0024706 vs. TAIR 10
Match: AT5G21930.2 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 0 

Query: 137 SSPSGDVIVLDVRGMTCKGCSASVQRILETQPQVAHASVDLASETAVVWPVAEAKITPNW 196
           S  S   I+LDV GM C GC A V+ +L +  +VA A V++ +ETA V    E ++T + 
Sbjct: 71  SITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADT 130

Query: 197 REELGPALAKHLTTCGFSS--NVQGQG 222
            E    +LAK LT  GF +   V G G
Sbjct: 131 AE----SLAKRLTESGFEAKRRVSGMG 153

The following BLAST results are available for this feature:
BLAST of Sed0024706 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887264.16.6e-5869.90copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida][more]
XP_022963522.13.3e-5770.41copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita moscha... [more]
XP_023553917.14.8e-5670.26copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo s... [more]
XP_022967629.18.1e-5669.39copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita maxima... [more]
XP_008455207.11.1e-5568.95PREDICTED: copper-transporting ATPase PAA1, chloroplastic-like [Cucumis melo][more]
BLAST of Sed0024706 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZC97.4e-2854.11Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
B9DFX71.8e-0540.23Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of Sed0024706 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HFH11.6e-5770.41copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita mosc... [more]
A0A6J1HX973.9e-5669.39copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxi... [more]
A0A6J1CKX05.1e-5668.37copper-transporting ATPase PAA1, chloroplastic-like OS=Momordica charantia OX=36... [more]
A0A1S3BZZ15.1e-5668.95copper-transporting ATPase PAA1, chloroplastic-like OS=Cucumis melo OX=3656 GN=L... [more]
A0A0A0K5Z31.7e-5468.42HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062830 PE=4 SV... [more]
BLAST of Sed0024706 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33520.18.2e-3052.98P-type ATP-ase 1 [more]
AT4G33520.25.3e-2954.11P-type ATP-ase 1 [more]
AT4G33520.35.3e-2954.11P-type ATP-ase 1 [more]
AT5G21930.11.3e-0640.23P-type ATPase of Arabidopsis 2 [more]
AT5G21930.21.3e-0640.23P-type ATPase of Arabidopsis 2 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 142..221
e-value: 1.9E-14
score: 55.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..142
NoneNo IPR availablePANTHERPTHR43520ATP7, ISOFORM Bcoord: 128..216
NoneNo IPR availablePANTHERPTHR43520:SF22COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTICcoord: 128..216
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 145..193
e-value: 1.0E-9
score: 38.7
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 143..217
score: 14.04034
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 145..189
e-value: 6.30714E-11
score: 54.5341
IPR017969Heavy-metal-associated, conserved sitePROSITEPS01047HMA_1coord: 148..177
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 143..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0024706.1Sed0024706.1mRNA
Sed0024706.2Sed0024706.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055070 copper ion homeostasis
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0043682 P-type divalent copper transporter activity
molecular_function GO:0046872 metal ion binding