Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAACATCCTCCATAACAGACCGAAAATTCTGCCTTTAGAATTCAATTCAGTGAGCTTTCGCTCAAAATCCCAAATCTCCAAACTCGCCGGGAAATCACAATGTCCGCCGCCGGCAACTAACTTGATCGGAAAATCACAATGGGTTGTTGCGTTAGTTCAGGGAAATCCACAAATTCGACGCACAAACTTGATCGGAATTCTACAGCAGCCGCCGTTAAGAACAATGAAAACAGAGAGCCGCCGTCTGTCACAGAGGAAGAAACGGTCAAAGAAGTTCTCACTGAAACGACTGCACTGAAACCACCGCCGCCGCCTCCGCCGCCAATACCACCGGAAAAAGACGCCGCCGTCAAAAGCGAGGGAAATGACATCGAGAAGAAGTTTAATGAAATTCCCATTGATGGAATTGTACAACAACCTTCGGAATTCTATGAAATTTCCAAATCGAACGAGTTTCTCGCCACCGCTAATTTCATCGATATAATCGACGGCGGCGGCGGCGGCGGCGGAGAGGTTCATCAGAAAGCTTTGAAATCATCGCCAGTGAAATTGCCGAAAACCCAATTAATTGTTGGATCGCCGAACAAGACGCTGAACCGGAGATCCGAACCGTCGCCGGTCCGACGAAACAGAGCTGTCGGGGCGGCGGGTTTTGTTCAGAACAGAGACGTAAGTCCGGCAATGGCGCGGCGGGGATTGAGGCCGGAGTTTCCCCGGAGAGACCCAGATGAGAATCCCGGCAGGAGATCTCGGTCGCCGGCCGCCGCACGTCTCGAAGGCGAAAGATCTAGATCTGCCCTTAGACCGGCGGCACCGGCACCGTCGGTGAGAAAGCTAGGTAAGTCGTCGCCGCTCAGGGCGGCGACGGCGACGGCACCGGCGGCCGGTCAAAAGAGAGTAGAAGAAAACAATATAATCGATGAAAATTGCAATACTCAGATTGAATCACTGGAAAACCCTCTGGTTTCATTGGAGTGCTTCATCTTCCTCTGAAATTGAAAAAAAAAACTCACAATTCTCAATTGCTCACTTTTTTGCTTTTATTTT
mRNA sequence
GTAACATCCTCCATAACAGACCGAAAATTCTGCCTTTAGAATTCAATTCAGTGAGCTTTCGCTCAAAATCCCAAATCTCCAAACTCGCCGGGAAATCACAATGTCCGCCGCCGGCAACTAACTTGATCGGAAAATCACAATGGGTTGTTGCGTTAGTTCAGGGAAATCCACAAATTCGACGCACAAACTTGATCGGAATTCTACAGCAGCCGCCGTTAAGAACAATGAAAACAGAGAGCCGCCGTCTGTCACAGAGGAAGAAACGGTCAAAGAAGTTCTCACTGAAACGACTGCACTGAAACCACCGCCGCCGCCTCCGCCGCCAATACCACCGGAAAAAGACGCCGCCGTCAAAAGCGAGGGAAATGACATCGAGAAGAAGTTTAATGAAATTCCCATTGATGGAATTGTACAACAACCTTCGGAATTCTATGAAATTTCCAAATCGAACGAGTTTCTCGCCACCGCTAATTTCATCGATATAATCGACGGCGGCGGCGGCGGCGGCGGAGAGGTTCATCAGAAAGCTTTGAAATCATCGCCAGTGAAATTGCCGAAAACCCAATTAATTGTTGGATCGCCGAACAAGACGCTGAACCGGAGATCCGAACCGTCGCCGGTCCGACGAAACAGAGCTGTCGGGGCGGCGGGTTTTGTTCAGAACAGAGACGTAAGTCCGGCAATGGCGCGGCGGGGATTGAGGCCGGAGTTTCCCCGGAGAGACCCAGATGAGAATCCCGGCAGGAGATCTCGGTCGCCGGCCGCCGCACGTCTCGAAGGCGAAAGATCTAGATCTGCCCTTAGACCGGCGGCACCGGCACCGTCGGTGAGAAAGCTAGGTAAGTCGTCGCCGCTCAGGGCGGCGACGGCGACGGCACCGGCGGCCGGTCAAAAGAGAGTAGAAGAAAACAATATAATCGATGAAAATTGCAATACTCAGATTGAATCACTGGAAAACCCTCTGGTTTCATTGGAGTGCTTCATCTTCCTCTGAAATTGAAAAAAAAAACTCACAATTCTCAATTGCTCACTTTTTTGCTTTTATTTT
Coding sequence (CDS)
ATGGGTTGTTGCGTTAGTTCAGGGAAATCCACAAATTCGACGCACAAACTTGATCGGAATTCTACAGCAGCCGCCGTTAAGAACAATGAAAACAGAGAGCCGCCGTCTGTCACAGAGGAAGAAACGGTCAAAGAAGTTCTCACTGAAACGACTGCACTGAAACCACCGCCGCCGCCTCCGCCGCCAATACCACCGGAAAAAGACGCCGCCGTCAAAAGCGAGGGAAATGACATCGAGAAGAAGTTTAATGAAATTCCCATTGATGGAATTGTACAACAACCTTCGGAATTCTATGAAATTTCCAAATCGAACGAGTTTCTCGCCACCGCTAATTTCATCGATATAATCGACGGCGGCGGCGGCGGCGGCGGAGAGGTTCATCAGAAAGCTTTGAAATCATCGCCAGTGAAATTGCCGAAAACCCAATTAATTGTTGGATCGCCGAACAAGACGCTGAACCGGAGATCCGAACCGTCGCCGGTCCGACGAAACAGAGCTGTCGGGGCGGCGGGTTTTGTTCAGAACAGAGACGTAAGTCCGGCAATGGCGCGGCGGGGATTGAGGCCGGAGTTTCCCCGGAGAGACCCAGATGAGAATCCCGGCAGGAGATCTCGGTCGCCGGCCGCCGCACGTCTCGAAGGCGAAAGATCTAGATCTGCCCTTAGACCGGCGGCACCGGCACCGTCGGTGAGAAAGCTAGGTAAGTCGTCGCCGCTCAGGGCGGCGACGGCGACGGCACCGGCGGCCGGTCAAAAGAGAGTAGAAGAAAACAATATAATCGATGAAAATTGCAATACTCAGATTGAATCACTGGAAAACCCTCTGGTTTCATTGGAGTGCTTCATCTTCCTCTGA
Protein sequence
MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPPPPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATANFIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVGSPNKTLNRRSEPSPVRRNRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSVRKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL
Homology
BLAST of Sed0024673 vs. NCBI nr
Match:
XP_038882208.1 (uncharacterized protein LOC120073430 [Benincasa hispida])
HSP 1 Score: 283.5 bits (724), Expect = 2.0e-72
Identity = 180/293 (61.43%), Postives = 206/293 (70.31%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
MGCC+SSGKS NS +K RNS +N +R+PPS EEETVKEVL+ET +LKPPP PP
Sbjct: 1 MGCCLSSGKSFNSPNKFHRNS------DNGSRDPPSSMEEETVKEVLSETPSLKPPPSPP 60
Query: 61 PP-IPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATANFIDIIDGG 120
PPE+D +K GN+IEKK EI I+GI + PSEFYEIS NE ++ + I
Sbjct: 61 KKNSPPEEDQVLKPVGNEIEKKLCEISINGIAELPSEFYEISHPNECISVSTAITTEQ-- 120
Query: 121 GGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSPVRRNRAVGAAG 180
GGGE+HQ LKSSPVKLPK Q I G S N+TL RRS+ SPVRRN A+G+
Sbjct: 121 MDGGGEIHQMVLKSSPVKLPKDQSISGDFEVKREISQNRTLTRRSDQSPVRRNGAIGSMR 180
Query: 181 FVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSVR 240
V NRD++PAMARR LR E PRRDPDEN RRSRSPA AR +G SRSAL + PSVR
Sbjct: 181 MVHNRDMNPAMARRVLRAEPPRRDPDENSIRRSRSPATARSDGVGSRSAL---SRTPSVR 240
Query: 241 KLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
K GKSSP RAATAT+ QK VEENNIID N+QIESLENPLVSLECFIFL
Sbjct: 241 KSGKSSPNRAATATS----QKVVEENNIIDGKFNSQIESLENPLVSLECFIFL 278
BLAST of Sed0024673 vs. NCBI nr
Match:
XP_022926404.1 (uncharacterized protein LOC111433567 [Cucurbita moschata])
HSP 1 Score: 275.4 bits (703), Expect = 5.5e-70
Identity = 187/306 (61.11%), Postives = 206/306 (67.32%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVK------NNENREPPSVTEEETVKEVLTETTALK 60
MGCCVSSGKS++S HK D AAA K +N +REPPS EEETVKEVL+ET ALK
Sbjct: 1 MGCCVSSGKSSSSAHKFD---AAAADKIFGPLTDNGSREPPSSMEEETVKEVLSETHALK 60
Query: 61 P--PPPPPPPIPPEKDAAVKSEGN----DIEKKFNEIPIDGIVQQPSEFYEISKSNEFLA 120
P PP PPE+D A K G+ +IEKK EIPI+GIVQQPSEF EIS ++F A
Sbjct: 61 PLAISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQPSEFDEISNPDKFFA 120
Query: 121 TANFIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSP 180
TANF DI+D GG EVHQ LK+ LP Q I G SPNKTLNRRS+ SP
Sbjct: 121 TANFTDIMD----GGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSP 180
Query: 181 VRRNRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSA 240
VRRN VG+A VQ RD SPAM RGLR E ++DPDEN GRRSRSPA AR + SRSA
Sbjct: 181 VRRNSFVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSA 240
Query: 241 LRPAAPAPSVRKLGKSSPLRAATA--TAPAAGQKRVEENNIIDENCNTQIESLENPLVSL 285
L PSVRK GKSSPLR TA APA +K VEENNI D N TQIESLENPLVSL
Sbjct: 241 L---GRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSL 292
BLAST of Sed0024673 vs. NCBI nr
Match:
KAG7026590.1 (hypothetical protein SDJN02_10592, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 273.5 bits (698), Expect = 2.1e-69
Identity = 182/303 (60.07%), Postives = 204/303 (67.33%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTA---AAVKNNENREPPSVTEEETVKEVLTETTALKPPP 60
MGCCVSSGKS++S HK D + + +N +REPPS EEETVKEVL+ET ALKP P
Sbjct: 1 MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
Query: 61 --PPPPPIPPEKDAAVKSEGN----DIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATAN 120
PP PPE+D A K G+ +IEKK EIPI+GIVQQ SEF EIS ++F ATAN
Sbjct: 61 ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120
Query: 121 FIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSPVRR 180
F DI+D GG EVHQ LK+ LP Q I G SPNKTLNRRS+ SPVRR
Sbjct: 121 FTDIMD----GGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRR 180
Query: 181 NRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRP 240
N VG+A VQ RD SPAM RGLR E ++DPDEN GRRSRSPA AR + SRSAL
Sbjct: 181 NSFVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSAL-- 240
Query: 241 AAPAPSVRKLGKSSPLRAATA--TAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECF 285
PSVRK GKSSPLR TA APA +K VEENNI + N TQIESLENPLVSLECF
Sbjct: 241 -GRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECF 292
BLAST of Sed0024673 vs. NCBI nr
Match:
KAG6594621.1 (hypothetical protein SDJN03_11174, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 272.7 bits (696), Expect = 3.6e-69
Identity = 182/303 (60.07%), Postives = 203/303 (67.00%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTA---AAVKNNENREPPSVTEEETVKEVLTETTALKPPP 60
MGCCVSSGKS++S HK D + + +N +REPPS EEETVKEVL+ET ALKP P
Sbjct: 1 MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60
Query: 61 --PPPPPIPPEKDAAVKSEGN----DIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATAN 120
PP PPE+D A K G+ +IEKK EIPI+GIVQQ SEF EIS ++F ATAN
Sbjct: 61 ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120
Query: 121 FIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSPVRR 180
F DI+D GG EVHQ LK+ LP Q I G SPNKTLNRRS+ SPVRR
Sbjct: 121 FTDIMD----GGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRR 180
Query: 181 NRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRP 240
N VG+A VQ +D SPAM RGLR E +DPDEN GRRSRSPA AR + SRSAL
Sbjct: 181 NSFVGSARLVQKKDASPAMTHRGLRTEPTPKDPDENFGRRSRSPATARFDSGGSRSAL-- 240
Query: 241 AAPAPSVRKLGKSSPLRAATA--TAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECF 285
PSVRK GKSSPLR TA APA +K VEENNI D N TQIESLENPLVSLECF
Sbjct: 241 -GRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSLECF 292
BLAST of Sed0024673 vs. NCBI nr
Match:
XP_008441084.1 (PREDICTED: uncharacterized protein LOC103485312 [Cucumis melo] >KAA0052709.1 putative BEST plant protein match is: (TAIR:plant.1) protein [Cucumis melo var. makuwa] >TYK13115.1 putative BEST plant protein match is: (TAIR:plant.1) protein [Cucumis melo var. makuwa])
HSP 1 Score: 263.8 bits (673), Expect = 1.7e-66
Identity = 170/294 (57.82%), Postives = 198/294 (67.35%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
MGCC+SS +S NS +K +S N NR+PPS EEETVKEVL+ET ALK PPP
Sbjct: 1 MGCCLSSSQSFNSPNKFHPSSV------NANRDPPSSMEEETVKEVLSETPALK--PPPN 60
Query: 61 PPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFL--ATANFIDIIDG 120
PPE+D K G++ EKK +EIPI+GI +QPSEFYEIS N+ + + A F D D
Sbjct: 61 KNCPPEEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQAD- 120
Query: 121 GGGGGGEVHQKALKSSPVKLPKTQLIVGS--------PNKTLNRRSEPSPVRRNRAVGAA 180
GGGEVHQ LKSSPVKL K Q + ++TL RRS+ SPVRRN AVG+
Sbjct: 121 ---GGGEVHQTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSM 180
Query: 181 GFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSV 240
V NRD+SPAMARRGLR E PRRDPDEN RRS+SP+ A + RSAL + PS
Sbjct: 181 RMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSAL---SRTPST 240
Query: 241 RKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
RK GKSSP+RA TAT+ QK VEENNI+D NTQIESLENPLVSLECFIFL
Sbjct: 241 RKSGKSSPIRAMTATS----QKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275
BLAST of Sed0024673 vs. ExPASy TrEMBL
Match:
A0A6J1EF08 (uncharacterized protein LOC111433567 OS=Cucurbita moschata OX=3662 GN=LOC111433567 PE=4 SV=1)
HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 187/306 (61.11%), Postives = 206/306 (67.32%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVK------NNENREPPSVTEEETVKEVLTETTALK 60
MGCCVSSGKS++S HK D AAA K +N +REPPS EEETVKEVL+ET ALK
Sbjct: 1 MGCCVSSGKSSSSAHKFD---AAAADKIFGPLTDNGSREPPSSMEEETVKEVLSETHALK 60
Query: 61 P--PPPPPPPIPPEKDAAVKSEGN----DIEKKFNEIPIDGIVQQPSEFYEISKSNEFLA 120
P PP PPE+D A K G+ +IEKK EIPI+GIVQQPSEF EIS ++F A
Sbjct: 61 PLAISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQPSEFDEISNPDKFFA 120
Query: 121 TANFIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSP 180
TANF DI+D GG EVHQ LK+ LP Q I G SPNKTLNRRS+ SP
Sbjct: 121 TANFTDIMD----GGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSP 180
Query: 181 VRRNRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSA 240
VRRN VG+A VQ RD SPAM RGLR E ++DPDEN GRRSRSPA AR + SRSA
Sbjct: 181 VRRNSFVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSA 240
Query: 241 LRPAAPAPSVRKLGKSSPLRAATA--TAPAAGQKRVEENNIIDENCNTQIESLENPLVSL 285
L PSVRK GKSSPLR TA APA +K VEENNI D N TQIESLENPLVSL
Sbjct: 241 L---GRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSL 292
BLAST of Sed0024673 vs. ExPASy TrEMBL
Match:
A0A5D3CNI1 (Putative BEST plant protein match is: (TAIR:plant.1) protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007250 PE=4 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 8.0e-67
Identity = 170/294 (57.82%), Postives = 198/294 (67.35%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
MGCC+SS +S NS +K +S N NR+PPS EEETVKEVL+ET ALK PPP
Sbjct: 1 MGCCLSSSQSFNSPNKFHPSSV------NANRDPPSSMEEETVKEVLSETPALK--PPPN 60
Query: 61 PPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFL--ATANFIDIIDG 120
PPE+D K G++ EKK +EIPI+GI +QPSEFYEIS N+ + + A F D D
Sbjct: 61 KNCPPEEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQAD- 120
Query: 121 GGGGGGEVHQKALKSSPVKLPKTQLIVGS--------PNKTLNRRSEPSPVRRNRAVGAA 180
GGGEVHQ LKSSPVKL K Q + ++TL RRS+ SPVRRN AVG+
Sbjct: 121 ---GGGEVHQTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSM 180
Query: 181 GFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSV 240
V NRD+SPAMARRGLR E PRRDPDEN RRS+SP+ A + RSAL + PS
Sbjct: 181 RMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSAL---SRTPST 240
Query: 241 RKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
RK GKSSP+RA TAT+ QK VEENNI+D NTQIESLENPLVSLECFIFL
Sbjct: 241 RKSGKSSPIRAMTATS----QKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275
BLAST of Sed0024673 vs. ExPASy TrEMBL
Match:
A0A1S3B2L5 (uncharacterized protein LOC103485312 OS=Cucumis melo OX=3656 GN=LOC103485312 PE=4 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 8.0e-67
Identity = 170/294 (57.82%), Postives = 198/294 (67.35%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
MGCC+SS +S NS +K +S N NR+PPS EEETVKEVL+ET ALK PPP
Sbjct: 1 MGCCLSSSQSFNSPNKFHPSSV------NANRDPPSSMEEETVKEVLSETPALK--PPPN 60
Query: 61 PPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFL--ATANFIDIIDG 120
PPE+D K G++ EKK +EIPI+GI +QPSEFYEIS N+ + + A F D D
Sbjct: 61 KNCPPEEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQAD- 120
Query: 121 GGGGGGEVHQKALKSSPVKLPKTQLIVGS--------PNKTLNRRSEPSPVRRNRAVGAA 180
GGGEVHQ LKSSPVKL K Q + ++TL RRS+ SPVRRN AVG+
Sbjct: 121 ---GGGEVHQTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSM 180
Query: 181 GFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSV 240
V NRD+SPAMARRGLR E PRRDPDEN RRS+SP+ A + RSAL + PS
Sbjct: 181 RMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSAL---SRTPST 240
Query: 241 RKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
RK GKSSP+RA TAT+ QK VEENNI+D NTQIESLENPLVSLECFIFL
Sbjct: 241 RKSGKSSPIRAMTATS----QKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275
BLAST of Sed0024673 vs. ExPASy TrEMBL
Match:
A0A0A0KLE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517100 PE=4 SV=1)
HSP 1 Score: 255.8 bits (652), Expect = 2.2e-64
Identity = 168/294 (57.14%), Postives = 196/294 (66.67%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
MGCC+SS +S +S +K NS N +R+PPS EEETVKEVL+ET ALKPP
Sbjct: 1 MGCCLSSTQSFSSPNKFHSNSV------NVSRDPPSSMEEETVKEVLSETPALKPPQKNN 60
Query: 61 PPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFL--ATANFIDIIDG 120
PE+D K G++IEKK +EIPI+GI +QPSEFYEIS N+ + + A F D D
Sbjct: 61 S--APEQDEFRKPLGDEIEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQTD- 120
Query: 121 GGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSPVRRNRAVGAA 180
GGGEVHQ LKSSPVKL K Q + ++TL RRS+ SPVRRN AVG+
Sbjct: 121 ---GGGEVHQTVLKSSPVKLTKNQSVSSDVELKREIQQSRTLTRRSDQSPVRRNGAVGSI 180
Query: 181 GFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSV 240
V NRD+SPAMARRGLR E PRRDPDEN RRS SP+ AR + RSAL + PS
Sbjct: 181 RMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSHSPSTARSDSAGYRSAL---SRTPSA 240
Query: 241 RKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
RK GKSSP+ A TAT+ QK VEENNI+D NTQIESLENPLVSLECFIFL
Sbjct: 241 RKSGKSSPITAMTATS----QKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275
BLAST of Sed0024673 vs. ExPASy TrEMBL
Match:
A0A6J1CMA7 (uncharacterized protein LOC111012433 OS=Momordica charantia OX=3673 GN=LOC111012433 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 3.0e-37
Identity = 104/192 (54.17%), Postives = 122/192 (63.54%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
MGCCVSSG NS HK DRNS AA K E+REPPS EEETVKEVLTET ALKPPPPP
Sbjct: 1 MGCCVSSG---NSAHKFDRNSAAADEKIYESREPPSSMEEETVKEVLTETPALKPPPPPK 60
Query: 61 PPIPPEKDAA-------VKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATANFI 120
PP++D A VK E N+IEKK IP + + + EF EIS +E L+ A F
Sbjct: 61 NH-PPDEDEAPKPVADKVKEEENEIEKKIRVIPTNCVAEHACEFSEISSPSECLSAATFT 120
Query: 121 DIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVGS------PNKTLNRRSEPSPVRRNRAV 180
D +D G EVHQ+ ++SPVKLPK Q G PN+ LNRRS+ SPVRRN V
Sbjct: 121 DKMD----DGEEVHQRVFRASPVKLPKNQSFSGDVKREMLPNRALNRRSDQSPVRRNGVV 180
BLAST of Sed0024673 vs. TAIR 10
Match:
AT1G11125.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61170.1). )
HSP 1 Score: 43.1 bits (100), Expect = 4.3e-04
Identity = 92/309 (29.77%), Postives = 123/309 (39.81%), Query Frame = 0
Query: 1 MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEET-VKEVLTETTALKPPPPP 60
MGCC+SS + + +TA PPSV +EET VKEVL+ETT L
Sbjct: 1 MGCCLSSATADKKDDPVSGKNTA---------RPPSVIDEETVVKEVLSETTLLTSSNDN 60
Query: 61 PPPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQP----SEFYEISKSNEFLATANFIDI 120
EK K + + E+K I +D + Q+P E K +E + +
Sbjct: 61 S---TVEKTTLTKIQ--EEEEKKPGIVVD-VAQEPVLTKPSLVEPEKGSEVSENCSLSES 120
Query: 121 IDGGGGGGGEVHQKALKS------SPVKLPKTQLIVGSPNKTLNRRSEPSPVRRNRAVGA 180
+ E K +KS SP K + +++V P NRR++ SP +RN A
Sbjct: 121 LLSIVNKYDEEEVKQMKSHVVRQRSPAK-SRNRVMVSYP----NRRTDMSPRKRNNEEEA 180
Query: 181 AGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPS 240
R V A RD E RRSRSPA R + P S
Sbjct: 181 GSV---RLVPSATG---------TRDSTERSERRSRSPAMNR------SVMMGPTRSQQS 240
Query: 241 VRKLGKSSPLRAATATAPAAGQKRVEEN-NIIDENCN-------------TQIESLENPL 285
G A + + G+ R+ N N D+ CN +S ENPL
Sbjct: 241 TDSCG------AMRRQSQSPGRVRLNPNMNGSDQECNHHKWPGSIGNYNSAPNDSFENPL 265
BLAST of Sed0024673 vs. TAIR 10
Match:
AT1G61170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). )
HSP 1 Score: 42.4 bits (98), Expect = 7.3e-04
Identity = 87/296 (29.39%), Postives = 119/296 (40.20%), Query Frame = 0
Query: 3 CCVSSGKSTNSTHKL-DRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPPP 62
CCVSSG + + D+N+T V EE VKEVL+ETT P
Sbjct: 4 CCVSSGTTDRENENVSDKNTTI-------------VEEETVVKEVLSETTLF--TPSSSF 63
Query: 63 PIPPEKDAAVKSEGNDIEKK--FNEIPIDGIVQQP-----------SEFYEISKSNEFLA 122
KD D EKK F ++ D ++ +P SE +S S +
Sbjct: 64 RTSTFKDPVKTKIREDEEKKPGFLKMASDPVLIRPGSVDPEEGSEVSEICSLSLSESVSS 123
Query: 123 TANFIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVGSPNKTLNRRSEPSPVRRNRAVG 182
T +++G + Q+ + SP K +TQ+ + N RR++ SP +RN
Sbjct: 124 TV----VMNGYDEEHVMMKQRKSQRSPAK-TRTQV---TGNNYPTRRTDQSPRKRNNG-- 183
Query: 183 AAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAP 242
G R RDP E GRRSRSPA R + ++S+ A
Sbjct: 184 --------------TCNGARYGSGVRDPGERSGRRSRSPATNRSVMDSNQSSRVGGAKT- 243
Query: 243 SVRKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
+ SP R A ++ +N T E LENPLVSLECFIFL
Sbjct: 244 ---RKNNQSPGRVRLDPAKNGLDQQQHQN-----YGYTTEELLENPLVSLECFIFL 251
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882208.1 | 2.0e-72 | 61.43 | uncharacterized protein LOC120073430 [Benincasa hispida] | [more] |
XP_022926404.1 | 5.5e-70 | 61.11 | uncharacterized protein LOC111433567 [Cucurbita moschata] | [more] |
KAG7026590.1 | 2.1e-69 | 60.07 | hypothetical protein SDJN02_10592, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6594621.1 | 3.6e-69 | 60.07 | hypothetical protein SDJN03_11174, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_008441084.1 | 1.7e-66 | 57.82 | PREDICTED: uncharacterized protein LOC103485312 [Cucumis melo] >KAA0052709.1 put... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EF08 | 2.7e-70 | 61.11 | uncharacterized protein LOC111433567 OS=Cucurbita moschata OX=3662 GN=LOC1114335... | [more] |
A0A5D3CNI1 | 8.0e-67 | 57.82 | Putative BEST plant protein match is: (TAIR:plant.1) protein OS=Cucumis melo var... | [more] |
A0A1S3B2L5 | 8.0e-67 | 57.82 | uncharacterized protein LOC103485312 OS=Cucumis melo OX=3656 GN=LOC103485312 PE=... | [more] |
A0A0A0KLE9 | 2.2e-64 | 57.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517100 PE=4 SV=1 | [more] |
A0A6J1CMA7 | 3.0e-37 | 54.17 | uncharacterized protein LOC111012433 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
Match Name | E-value | Identity | Description | |
AT1G11125.1 | 4.3e-04 | 29.77 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G61170.1 | 7.3e-04 | 29.39 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |