Sed0024673 (gene) Chayote v1

Overview
NameSed0024673
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSerine/arginine repetitive matrix protein 1
LocationLG14: 22872946 .. 22873993 (+)
RNA-Seq ExpressionSed0024673
SyntenySed0024673
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAACATCCTCCATAACAGACCGAAAATTCTGCCTTTAGAATTCAATTCAGTGAGCTTTCGCTCAAAATCCCAAATCTCCAAACTCGCCGGGAAATCACAATGTCCGCCGCCGGCAACTAACTTGATCGGAAAATCACAATGGGTTGTTGCGTTAGTTCAGGGAAATCCACAAATTCGACGCACAAACTTGATCGGAATTCTACAGCAGCCGCCGTTAAGAACAATGAAAACAGAGAGCCGCCGTCTGTCACAGAGGAAGAAACGGTCAAAGAAGTTCTCACTGAAACGACTGCACTGAAACCACCGCCGCCGCCTCCGCCGCCAATACCACCGGAAAAAGACGCCGCCGTCAAAAGCGAGGGAAATGACATCGAGAAGAAGTTTAATGAAATTCCCATTGATGGAATTGTACAACAACCTTCGGAATTCTATGAAATTTCCAAATCGAACGAGTTTCTCGCCACCGCTAATTTCATCGATATAATCGACGGCGGCGGCGGCGGCGGCGGAGAGGTTCATCAGAAAGCTTTGAAATCATCGCCAGTGAAATTGCCGAAAACCCAATTAATTGTTGGATCGCCGAACAAGACGCTGAACCGGAGATCCGAACCGTCGCCGGTCCGACGAAACAGAGCTGTCGGGGCGGCGGGTTTTGTTCAGAACAGAGACGTAAGTCCGGCAATGGCGCGGCGGGGATTGAGGCCGGAGTTTCCCCGGAGAGACCCAGATGAGAATCCCGGCAGGAGATCTCGGTCGCCGGCCGCCGCACGTCTCGAAGGCGAAAGATCTAGATCTGCCCTTAGACCGGCGGCACCGGCACCGTCGGTGAGAAAGCTAGGTAAGTCGTCGCCGCTCAGGGCGGCGACGGCGACGGCACCGGCGGCCGGTCAAAAGAGAGTAGAAGAAAACAATATAATCGATGAAAATTGCAATACTCAGATTGAATCACTGGAAAACCCTCTGGTTTCATTGGAGTGCTTCATCTTCCTCTGAAATTGAAAAAAAAAACTCACAATTCTCAATTGCTCACTTTTTTGCTTTTATTTT

mRNA sequence

GTAACATCCTCCATAACAGACCGAAAATTCTGCCTTTAGAATTCAATTCAGTGAGCTTTCGCTCAAAATCCCAAATCTCCAAACTCGCCGGGAAATCACAATGTCCGCCGCCGGCAACTAACTTGATCGGAAAATCACAATGGGTTGTTGCGTTAGTTCAGGGAAATCCACAAATTCGACGCACAAACTTGATCGGAATTCTACAGCAGCCGCCGTTAAGAACAATGAAAACAGAGAGCCGCCGTCTGTCACAGAGGAAGAAACGGTCAAAGAAGTTCTCACTGAAACGACTGCACTGAAACCACCGCCGCCGCCTCCGCCGCCAATACCACCGGAAAAAGACGCCGCCGTCAAAAGCGAGGGAAATGACATCGAGAAGAAGTTTAATGAAATTCCCATTGATGGAATTGTACAACAACCTTCGGAATTCTATGAAATTTCCAAATCGAACGAGTTTCTCGCCACCGCTAATTTCATCGATATAATCGACGGCGGCGGCGGCGGCGGCGGAGAGGTTCATCAGAAAGCTTTGAAATCATCGCCAGTGAAATTGCCGAAAACCCAATTAATTGTTGGATCGCCGAACAAGACGCTGAACCGGAGATCCGAACCGTCGCCGGTCCGACGAAACAGAGCTGTCGGGGCGGCGGGTTTTGTTCAGAACAGAGACGTAAGTCCGGCAATGGCGCGGCGGGGATTGAGGCCGGAGTTTCCCCGGAGAGACCCAGATGAGAATCCCGGCAGGAGATCTCGGTCGCCGGCCGCCGCACGTCTCGAAGGCGAAAGATCTAGATCTGCCCTTAGACCGGCGGCACCGGCACCGTCGGTGAGAAAGCTAGGTAAGTCGTCGCCGCTCAGGGCGGCGACGGCGACGGCACCGGCGGCCGGTCAAAAGAGAGTAGAAGAAAACAATATAATCGATGAAAATTGCAATACTCAGATTGAATCACTGGAAAACCCTCTGGTTTCATTGGAGTGCTTCATCTTCCTCTGAAATTGAAAAAAAAAACTCACAATTCTCAATTGCTCACTTTTTTGCTTTTATTTT

Coding sequence (CDS)

ATGGGTTGTTGCGTTAGTTCAGGGAAATCCACAAATTCGACGCACAAACTTGATCGGAATTCTACAGCAGCCGCCGTTAAGAACAATGAAAACAGAGAGCCGCCGTCTGTCACAGAGGAAGAAACGGTCAAAGAAGTTCTCACTGAAACGACTGCACTGAAACCACCGCCGCCGCCTCCGCCGCCAATACCACCGGAAAAAGACGCCGCCGTCAAAAGCGAGGGAAATGACATCGAGAAGAAGTTTAATGAAATTCCCATTGATGGAATTGTACAACAACCTTCGGAATTCTATGAAATTTCCAAATCGAACGAGTTTCTCGCCACCGCTAATTTCATCGATATAATCGACGGCGGCGGCGGCGGCGGCGGAGAGGTTCATCAGAAAGCTTTGAAATCATCGCCAGTGAAATTGCCGAAAACCCAATTAATTGTTGGATCGCCGAACAAGACGCTGAACCGGAGATCCGAACCGTCGCCGGTCCGACGAAACAGAGCTGTCGGGGCGGCGGGTTTTGTTCAGAACAGAGACGTAAGTCCGGCAATGGCGCGGCGGGGATTGAGGCCGGAGTTTCCCCGGAGAGACCCAGATGAGAATCCCGGCAGGAGATCTCGGTCGCCGGCCGCCGCACGTCTCGAAGGCGAAAGATCTAGATCTGCCCTTAGACCGGCGGCACCGGCACCGTCGGTGAGAAAGCTAGGTAAGTCGTCGCCGCTCAGGGCGGCGACGGCGACGGCACCGGCGGCCGGTCAAAAGAGAGTAGAAGAAAACAATATAATCGATGAAAATTGCAATACTCAGATTGAATCACTGGAAAACCCTCTGGTTTCATTGGAGTGCTTCATCTTCCTCTGA

Protein sequence

MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPPPPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATANFIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVGSPNKTLNRRSEPSPVRRNRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSVRKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL
Homology
BLAST of Sed0024673 vs. NCBI nr
Match: XP_038882208.1 (uncharacterized protein LOC120073430 [Benincasa hispida])

HSP 1 Score: 283.5 bits (724), Expect = 2.0e-72
Identity = 180/293 (61.43%), Postives = 206/293 (70.31%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
           MGCC+SSGKS NS +K  RNS      +N +R+PPS  EEETVKEVL+ET +LKPPP PP
Sbjct: 1   MGCCLSSGKSFNSPNKFHRNS------DNGSRDPPSSMEEETVKEVLSETPSLKPPPSPP 60

Query: 61  PP-IPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATANFIDIIDGG 120
               PPE+D  +K  GN+IEKK  EI I+GI + PSEFYEIS  NE ++ +  I      
Sbjct: 61  KKNSPPEEDQVLKPVGNEIEKKLCEISINGIAELPSEFYEISHPNECISVSTAITTEQ-- 120

Query: 121 GGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSPVRRNRAVGAAG 180
             GGGE+HQ  LKSSPVKLPK Q I G        S N+TL RRS+ SPVRRN A+G+  
Sbjct: 121 MDGGGEIHQMVLKSSPVKLPKDQSISGDFEVKREISQNRTLTRRSDQSPVRRNGAIGSMR 180

Query: 181 FVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSVR 240
            V NRD++PAMARR LR E PRRDPDEN  RRSRSPA AR +G  SRSAL   +  PSVR
Sbjct: 181 MVHNRDMNPAMARRVLRAEPPRRDPDENSIRRSRSPATARSDGVGSRSAL---SRTPSVR 240

Query: 241 KLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
           K GKSSP RAATAT+    QK VEENNIID   N+QIESLENPLVSLECFIFL
Sbjct: 241 KSGKSSPNRAATATS----QKVVEENNIIDGKFNSQIESLENPLVSLECFIFL 278

BLAST of Sed0024673 vs. NCBI nr
Match: XP_022926404.1 (uncharacterized protein LOC111433567 [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-70
Identity = 187/306 (61.11%), Postives = 206/306 (67.32%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVK------NNENREPPSVTEEETVKEVLTETTALK 60
           MGCCVSSGKS++S HK D    AAA K      +N +REPPS  EEETVKEVL+ET ALK
Sbjct: 1   MGCCVSSGKSSSSAHKFD---AAAADKIFGPLTDNGSREPPSSMEEETVKEVLSETHALK 60

Query: 61  P--PPPPPPPIPPEKDAAVKSEGN----DIEKKFNEIPIDGIVQQPSEFYEISKSNEFLA 120
           P    PP    PPE+D A K  G+    +IEKK  EIPI+GIVQQPSEF EIS  ++F A
Sbjct: 61  PLAISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQPSEFDEISNPDKFFA 120

Query: 121 TANFIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSP 180
           TANF DI+D    GG EVHQ  LK+    LP  Q I G        SPNKTLNRRS+ SP
Sbjct: 121 TANFTDIMD----GGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSP 180

Query: 181 VRRNRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSA 240
           VRRN  VG+A  VQ RD SPAM  RGLR E  ++DPDEN GRRSRSPA AR +   SRSA
Sbjct: 181 VRRNSFVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSA 240

Query: 241 LRPAAPAPSVRKLGKSSPLRAATA--TAPAAGQKRVEENNIIDENCNTQIESLENPLVSL 285
           L      PSVRK GKSSPLR  TA   APA  +K VEENNI D N  TQIESLENPLVSL
Sbjct: 241 L---GRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSL 292

BLAST of Sed0024673 vs. NCBI nr
Match: KAG7026590.1 (hypothetical protein SDJN02_10592, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.5 bits (698), Expect = 2.1e-69
Identity = 182/303 (60.07%), Postives = 204/303 (67.33%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTA---AAVKNNENREPPSVTEEETVKEVLTETTALKPPP 60
           MGCCVSSGKS++S HK D  +       + +N +REPPS  EEETVKEVL+ET ALKP P
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60

Query: 61  --PPPPPIPPEKDAAVKSEGN----DIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATAN 120
             PP    PPE+D A K  G+    +IEKK  EIPI+GIVQQ SEF EIS  ++F ATAN
Sbjct: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120

Query: 121 FIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSPVRR 180
           F DI+D    GG EVHQ  LK+    LP  Q I G        SPNKTLNRRS+ SPVRR
Sbjct: 121 FTDIMD----GGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRR 180

Query: 181 NRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRP 240
           N  VG+A  VQ RD SPAM  RGLR E  ++DPDEN GRRSRSPA AR +   SRSAL  
Sbjct: 181 NSFVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSAL-- 240

Query: 241 AAPAPSVRKLGKSSPLRAATA--TAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECF 285
               PSVRK GKSSPLR  TA   APA  +K VEENNI + N  TQIESLENPLVSLECF
Sbjct: 241 -GRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITEGNMITQIESLENPLVSLECF 292

BLAST of Sed0024673 vs. NCBI nr
Match: KAG6594621.1 (hypothetical protein SDJN03_11174, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272.7 bits (696), Expect = 3.6e-69
Identity = 182/303 (60.07%), Postives = 203/303 (67.00%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTA---AAVKNNENREPPSVTEEETVKEVLTETTALKPPP 60
           MGCCVSSGKS++S HK D  +       + +N +REPPS  EEETVKEVL+ET ALKP P
Sbjct: 1   MGCCVSSGKSSSSAHKFDAAAAGKIFGPLTDNGSREPPSSMEEETVKEVLSETHALKPLP 60

Query: 61  --PPPPPIPPEKDAAVKSEGN----DIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATAN 120
             PP    PPE+D A K  G+    +IEKK  EIPI+GIVQQ SEF EIS  ++F ATAN
Sbjct: 61  ISPPLKSCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQASEFDEISNPDKFFATAN 120

Query: 121 FIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSPVRR 180
           F DI+D    GG EVHQ  LK+    LP  Q I G        SPNKTLNRRS+ SPVRR
Sbjct: 121 FTDIMD----GGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSPVRR 180

Query: 181 NRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRP 240
           N  VG+A  VQ +D SPAM  RGLR E   +DPDEN GRRSRSPA AR +   SRSAL  
Sbjct: 181 NSFVGSARLVQKKDASPAMTHRGLRTEPTPKDPDENFGRRSRSPATARFDSGGSRSAL-- 240

Query: 241 AAPAPSVRKLGKSSPLRAATA--TAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECF 285
               PSVRK GKSSPLR  TA   APA  +K VEENNI D N  TQIESLENPLVSLECF
Sbjct: 241 -GRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSLECF 292

BLAST of Sed0024673 vs. NCBI nr
Match: XP_008441084.1 (PREDICTED: uncharacterized protein LOC103485312 [Cucumis melo] >KAA0052709.1 putative BEST plant protein match is: (TAIR:plant.1) protein [Cucumis melo var. makuwa] >TYK13115.1 putative BEST plant protein match is: (TAIR:plant.1) protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.8 bits (673), Expect = 1.7e-66
Identity = 170/294 (57.82%), Postives = 198/294 (67.35%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
           MGCC+SS +S NS +K   +S       N NR+PPS  EEETVKEVL+ET ALK  PPP 
Sbjct: 1   MGCCLSSSQSFNSPNKFHPSSV------NANRDPPSSMEEETVKEVLSETPALK--PPPN 60

Query: 61  PPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFL--ATANFIDIIDG 120
              PPE+D   K  G++ EKK +EIPI+GI +QPSEFYEIS  N+ +  + A F D  D 
Sbjct: 61  KNCPPEEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQAD- 120

Query: 121 GGGGGGEVHQKALKSSPVKLPKTQLIVGS--------PNKTLNRRSEPSPVRRNRAVGAA 180
              GGGEVHQ  LKSSPVKL K Q +            ++TL RRS+ SPVRRN AVG+ 
Sbjct: 121 ---GGGEVHQTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSM 180

Query: 181 GFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSV 240
             V NRD+SPAMARRGLR E PRRDPDEN  RRS+SP+ A  +    RSAL   +  PS 
Sbjct: 181 RMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSAL---SRTPST 240

Query: 241 RKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
           RK GKSSP+RA TAT+    QK VEENNI+D   NTQIESLENPLVSLECFIFL
Sbjct: 241 RKSGKSSPIRAMTATS----QKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

BLAST of Sed0024673 vs. ExPASy TrEMBL
Match: A0A6J1EF08 (uncharacterized protein LOC111433567 OS=Cucurbita moschata OX=3662 GN=LOC111433567 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 187/306 (61.11%), Postives = 206/306 (67.32%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVK------NNENREPPSVTEEETVKEVLTETTALK 60
           MGCCVSSGKS++S HK D    AAA K      +N +REPPS  EEETVKEVL+ET ALK
Sbjct: 1   MGCCVSSGKSSSSAHKFD---AAAADKIFGPLTDNGSREPPSSMEEETVKEVLSETHALK 60

Query: 61  P--PPPPPPPIPPEKDAAVKSEGN----DIEKKFNEIPIDGIVQQPSEFYEISKSNEFLA 120
           P    PP    PPE+D A K  G+    +IEKK  EIPI+GIVQQPSEF EIS  ++F A
Sbjct: 61  PLAISPPLKNCPPEEDEAQKPVGDKVTYEIEKKLPEIPINGIVQQPSEFDEISNPDKFFA 120

Query: 121 TANFIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSP 180
           TANF DI+D    GG EVHQ  LK+    LP  Q I G        SPNKTLNRRS+ SP
Sbjct: 121 TANFTDIMD----GGEEVHQMVLKA----LPTNQSIPGEVGLKRKLSPNKTLNRRSDQSP 180

Query: 181 VRRNRAVGAAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSA 240
           VRRN  VG+A  VQ RD SPAM  RGLR E  ++DPDEN GRRSRSPA AR +   SRSA
Sbjct: 181 VRRNSFVGSARLVQKRDASPAMTHRGLRTEPTQKDPDENFGRRSRSPATARFDSGGSRSA 240

Query: 241 LRPAAPAPSVRKLGKSSPLRAATA--TAPAAGQKRVEENNIIDENCNTQIESLENPLVSL 285
           L      PSVRK GKSSPLR  TA   APA  +K VEENNI D N  TQIESLENPLVSL
Sbjct: 241 L---GRTPSVRKSGKSSPLRTPTAITQAPATSRKVVEENNITDGNMITQIESLENPLVSL 292

BLAST of Sed0024673 vs. ExPASy TrEMBL
Match: A0A5D3CNI1 (Putative BEST plant protein match is: (TAIR:plant.1) protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007250 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 8.0e-67
Identity = 170/294 (57.82%), Postives = 198/294 (67.35%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
           MGCC+SS +S NS +K   +S       N NR+PPS  EEETVKEVL+ET ALK  PPP 
Sbjct: 1   MGCCLSSSQSFNSPNKFHPSSV------NANRDPPSSMEEETVKEVLSETPALK--PPPN 60

Query: 61  PPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFL--ATANFIDIIDG 120
              PPE+D   K  G++ EKK +EIPI+GI +QPSEFYEIS  N+ +  + A F D  D 
Sbjct: 61  KNCPPEEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQAD- 120

Query: 121 GGGGGGEVHQKALKSSPVKLPKTQLIVGS--------PNKTLNRRSEPSPVRRNRAVGAA 180
              GGGEVHQ  LKSSPVKL K Q +            ++TL RRS+ SPVRRN AVG+ 
Sbjct: 121 ---GGGEVHQTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSM 180

Query: 181 GFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSV 240
             V NRD+SPAMARRGLR E PRRDPDEN  RRS+SP+ A  +    RSAL   +  PS 
Sbjct: 181 RMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSAL---SRTPST 240

Query: 241 RKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
           RK GKSSP+RA TAT+    QK VEENNI+D   NTQIESLENPLVSLECFIFL
Sbjct: 241 RKSGKSSPIRAMTATS----QKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

BLAST of Sed0024673 vs. ExPASy TrEMBL
Match: A0A1S3B2L5 (uncharacterized protein LOC103485312 OS=Cucumis melo OX=3656 GN=LOC103485312 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 8.0e-67
Identity = 170/294 (57.82%), Postives = 198/294 (67.35%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
           MGCC+SS +S NS +K   +S       N NR+PPS  EEETVKEVL+ET ALK  PPP 
Sbjct: 1   MGCCLSSSQSFNSPNKFHPSSV------NANRDPPSSMEEETVKEVLSETPALK--PPPN 60

Query: 61  PPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFL--ATANFIDIIDG 120
              PPE+D   K  G++ EKK +EIPI+GI +QPSEFYEIS  N+ +  + A F D  D 
Sbjct: 61  KNCPPEEDEFHKPLGDETEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQAD- 120

Query: 121 GGGGGGEVHQKALKSSPVKLPKTQLIVGS--------PNKTLNRRSEPSPVRRNRAVGAA 180
              GGGEVHQ  LKSSPVKL K Q +            ++TL RRS+ SPVRRN AVG+ 
Sbjct: 121 ---GGGEVHQTGLKSSPVKLTKNQSVSSDVELKREIPQSRTLTRRSDQSPVRRNGAVGSM 180

Query: 181 GFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSV 240
             V NRD+SPAMARRGLR E PRRDPDEN  RRS+SP+ A  +    RSAL   +  PS 
Sbjct: 181 RMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSQSPSTAPSDSAGYRSAL---SRTPST 240

Query: 241 RKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
           RK GKSSP+RA TAT+    QK VEENNI+D   NTQIESLENPLVSLECFIFL
Sbjct: 241 RKSGKSSPIRAMTATS----QKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

BLAST of Sed0024673 vs. ExPASy TrEMBL
Match: A0A0A0KLE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517100 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.2e-64
Identity = 168/294 (57.14%), Postives = 196/294 (66.67%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
           MGCC+SS +S +S +K   NS       N +R+PPS  EEETVKEVL+ET ALKPP    
Sbjct: 1   MGCCLSSTQSFSSPNKFHSNSV------NVSRDPPSSMEEETVKEVLSETPALKPPQKNN 60

Query: 61  PPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFL--ATANFIDIIDG 120
               PE+D   K  G++IEKK +EIPI+GI +QPSEFYEIS  N+ +  + A F D  D 
Sbjct: 61  S--APEQDEFRKPLGDEIEKKLSEIPINGIPEQPSEFYEISHMNKCISVSAATFTDQTD- 120

Query: 121 GGGGGGEVHQKALKSSPVKLPKTQLIVG--------SPNKTLNRRSEPSPVRRNRAVGAA 180
              GGGEVHQ  LKSSPVKL K Q +            ++TL RRS+ SPVRRN AVG+ 
Sbjct: 121 ---GGGEVHQTVLKSSPVKLTKNQSVSSDVELKREIQQSRTLTRRSDQSPVRRNGAVGSI 180

Query: 181 GFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPSV 240
             V NRD+SPAMARRGLR E PRRDPDEN  RRS SP+ AR +    RSAL   +  PS 
Sbjct: 181 RMVHNRDMSPAMARRGLRAEPPRRDPDENSSRRSHSPSTARSDSAGYRSAL---SRTPSA 240

Query: 241 RKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
           RK GKSSP+ A TAT+    QK VEENNI+D   NTQIESLENPLVSLECFIFL
Sbjct: 241 RKSGKSSPITAMTATS----QKVVEENNIVDGKFNTQIESLENPLVSLECFIFL 275

BLAST of Sed0024673 vs. ExPASy TrEMBL
Match: A0A6J1CMA7 (uncharacterized protein LOC111012433 OS=Momordica charantia OX=3673 GN=LOC111012433 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.0e-37
Identity = 104/192 (54.17%), Postives = 122/192 (63.54%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPP 60
           MGCCVSSG   NS HK DRNS AA  K  E+REPPS  EEETVKEVLTET ALKPPPPP 
Sbjct: 1   MGCCVSSG---NSAHKFDRNSAAADEKIYESREPPSSMEEETVKEVLTETPALKPPPPPK 60

Query: 61  PPIPPEKDAA-------VKSEGNDIEKKFNEIPIDGIVQQPSEFYEISKSNEFLATANFI 120
              PP++D A       VK E N+IEKK   IP + + +   EF EIS  +E L+ A F 
Sbjct: 61  NH-PPDEDEAPKPVADKVKEEENEIEKKIRVIPTNCVAEHACEFSEISSPSECLSAATFT 120

Query: 121 DIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVGS------PNKTLNRRSEPSPVRRNRAV 180
           D +D     G EVHQ+  ++SPVKLPK Q   G       PN+ LNRRS+ SPVRRN  V
Sbjct: 121 DKMD----DGEEVHQRVFRASPVKLPKNQSFSGDVKREMLPNRALNRRSDQSPVRRNGVV 180

BLAST of Sed0024673 vs. TAIR 10
Match: AT1G11125.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61170.1). )

HSP 1 Score: 43.1 bits (100), Expect = 4.3e-04
Identity = 92/309 (29.77%), Postives = 123/309 (39.81%), Query Frame = 0

Query: 1   MGCCVSSGKSTNSTHKLDRNSTAAAVKNNENREPPSVTEEET-VKEVLTETTALKPPPPP 60
           MGCC+SS  +      +   +TA          PPSV +EET VKEVL+ETT L      
Sbjct: 1   MGCCLSSATADKKDDPVSGKNTA---------RPPSVIDEETVVKEVLSETTLLTSSNDN 60

Query: 61  PPPIPPEKDAAVKSEGNDIEKKFNEIPIDGIVQQP----SEFYEISKSNEFLATANFIDI 120
                 EK    K +  + E+K   I +D + Q+P        E  K +E     +  + 
Sbjct: 61  S---TVEKTTLTKIQ--EEEEKKPGIVVD-VAQEPVLTKPSLVEPEKGSEVSENCSLSES 120

Query: 121 IDGGGGGGGEVHQKALKS------SPVKLPKTQLIVGSPNKTLNRRSEPSPVRRNRAVGA 180
           +        E   K +KS      SP K  + +++V  P    NRR++ SP +RN    A
Sbjct: 121 LLSIVNKYDEEEVKQMKSHVVRQRSPAK-SRNRVMVSYP----NRRTDMSPRKRNNEEEA 180

Query: 181 AGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAPS 240
                 R V  A            RD  E   RRSRSPA  R         + P     S
Sbjct: 181 GSV---RLVPSATG---------TRDSTERSERRSRSPAMNR------SVMMGPTRSQQS 240

Query: 241 VRKLGKSSPLRAATATAPAAGQKRVEEN-NIIDENCN-------------TQIESLENPL 285
               G      A    + + G+ R+  N N  D+ CN                +S ENPL
Sbjct: 241 TDSCG------AMRRQSQSPGRVRLNPNMNGSDQECNHHKWPGSIGNYNSAPNDSFENPL 265

BLAST of Sed0024673 vs. TAIR 10
Match: AT1G61170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 7.3e-04
Identity = 87/296 (29.39%), Postives = 119/296 (40.20%), Query Frame = 0

Query: 3   CCVSSGKSTNSTHKL-DRNSTAAAVKNNENREPPSVTEEETVKEVLTETTALKPPPPPPP 62
           CCVSSG +      + D+N+T              V EE  VKEVL+ETT     P    
Sbjct: 4   CCVSSGTTDRENENVSDKNTTI-------------VEEETVVKEVLSETTLF--TPSSSF 63

Query: 63  PIPPEKDAAVKSEGNDIEKK--FNEIPIDGIVQQP-----------SEFYEISKSNEFLA 122
                KD        D EKK  F ++  D ++ +P           SE   +S S    +
Sbjct: 64  RTSTFKDPVKTKIREDEEKKPGFLKMASDPVLIRPGSVDPEEGSEVSEICSLSLSESVSS 123

Query: 123 TANFIDIIDGGGGGGGEVHQKALKSSPVKLPKTQLIVGSPNKTLNRRSEPSPVRRNRAVG 182
           T     +++G       + Q+  + SP K  +TQ+   + N    RR++ SP +RN    
Sbjct: 124 TV----VMNGYDEEHVMMKQRKSQRSPAK-TRTQV---TGNNYPTRRTDQSPRKRNNG-- 183

Query: 183 AAGFVQNRDVSPAMARRGLRPEFPRRDPDENPGRRSRSPAAARLEGERSRSALRPAAPAP 242
                            G R     RDP E  GRRSRSPA  R   + ++S+    A   
Sbjct: 184 --------------TCNGARYGSGVRDPGERSGRRSRSPATNRSVMDSNQSSRVGGAKT- 243

Query: 243 SVRKLGKSSPLRAATATAPAAGQKRVEENNIIDENCNTQIESLENPLVSLECFIFL 285
              +    SP R     A     ++  +N        T  E LENPLVSLECFIFL
Sbjct: 244 ---RKNNQSPGRVRLDPAKNGLDQQQHQN-----YGYTTEELLENPLVSLECFIFL 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882208.12.0e-7261.43uncharacterized protein LOC120073430 [Benincasa hispida][more]
XP_022926404.15.5e-7061.11uncharacterized protein LOC111433567 [Cucurbita moschata][more]
KAG7026590.12.1e-6960.07hypothetical protein SDJN02_10592, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6594621.13.6e-6960.07hypothetical protein SDJN03_11174, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008441084.11.7e-6657.82PREDICTED: uncharacterized protein LOC103485312 [Cucumis melo] >KAA0052709.1 put... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EF082.7e-7061.11uncharacterized protein LOC111433567 OS=Cucurbita moschata OX=3662 GN=LOC1114335... [more]
A0A5D3CNI18.0e-6757.82Putative BEST plant protein match is: (TAIR:plant.1) protein OS=Cucumis melo var... [more]
A0A1S3B2L58.0e-6757.82uncharacterized protein LOC103485312 OS=Cucumis melo OX=3656 GN=LOC103485312 PE=... [more]
A0A0A0KLE92.2e-6457.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517100 PE=4 SV=1[more]
A0A6J1CMA73.0e-3754.17uncharacterized protein LOC111012433 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
Match NameE-valueIdentityDescription
AT1G11125.14.3e-0429.77unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G61170.17.3e-0429.39unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePANTHERPTHR33871OS05G0503100 PROTEIN-RELATEDcoord: 1..284
NoneNo IPR availablePANTHERPTHR33871:SF1OS05G0503100 PROTEINcoord: 1..284

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0024673.1Sed0024673.1mRNA