Sed0024449 (gene) Chayote v1

Overview


Name	Sed0024449
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Epidermal patterning factor-like protein
Location	LG01: 9256390 .. 9257595 (-)
RNA-Seq Expression	Sed0024449
Synteny	Sed0024449

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCACAACCATTTCCCCCTCTTATAACTTATAAACCTTTTCCCTTATTTAAACACCTTATTCTTCTCCTTCTTTTATTCTTACCTTTAACATTCCATATCCATCCATCTCCTTTTTCTTTCTTTTTTCAGTCTCTGAAAAGATGGGCAGCCTTCCAATTTGGCAGAGAAACAAACATGTTCCAATTTCCATCATCTTCCTCTTTGTTTTCATCTTCATTCATGCCATATCCTCAATTGAAGGTAACCCATTTGTTTTTTTCCATTTTTTTAATGACCCGAGAATTTGGAGCTTTGCACTACGTAGAGCAAGATTATAATTAGACTTGTTTGATTGTTTTTGGTTCTTTGTTTTTGAAAACTAAGCTTATGGATACTACTTCCTTGTTTTGTTATCTATTTATCGAAATTCAAACAAAAATTAGAAAACTGAGATTTTTTTTATAACCATTTAGTTTTTGAAAATTAAGCCGACGAGCACTATTCTAGCCTTTGATTTTCTTATTTTTTATATCTACATTTTACCATACTAAAAAAAAAATCATTTCAAAAGTATCAAATGAGAATAAATGTTTTCCTAGAAAGAAATGAAAAAGGGTTAGATTCCAAAGCCAACATTTCTCCTAGAATAAAATGTTCACATTGAGTTGCATGTTTTTGGAACAATGCAGGAAGAGGAATTCAGGCACCAGTAAAGGAGGATAAGAAGGCAGAGAAGGTGGGGATGATGATGGGGAGTCAAATCGGGTCGCGGCCGCCGATCTGCCGAAGAAGATGCAGGGAATGCGGCAGCCGTTGCGAGGCAGTTCAAGTACCAGTGGGGCTGCATGATTCACATCAGAATCAAAGAAAAAGAAGAACCCAAGCTTCTTCTAATCATGATGTGGCTCTATCAAGTGAAGATGAGACCTCAAATTACAAACCCATAAGCTGGAAATGCAAGTGTGGAAACTTCATCTTCAACCCATGATGTATCTTTTTTCCCACAATTCAATATTTGAATAAAAACAGCAGCTTGTAAAGATGATCAAAAGCTGGAAATCAGCTCTTCTTCTGATCCAACTTCCAAGGTTCCATGAAAGGAAGGGACAGCAGCTAGGTGAAGTATGCAGAGTTTTAGTAAATGTATCTAAAGGGAAAATGAAATGAGAGTTTGAAAGAGAGGAAAATGAGGTGGCAGTGTTGTGTGTCAGGTGAGAATTCAG

mRNA sequence

AATTTCACAACCATTTCCCCCTCTTATAACTTATAAACCTTTTCCCTTATTTAAACACCTTATTCTTCTCCTTCTTTTATTCTTACCTTTAACATTCCATATCCATCCATCTCCTTTTTCTTTCTTTTTTCAGTCTCTGAAAAGATGGGCAGCCTTCCAATTTGGCAGAGAAACAAACATGTTCCAATTTCCATCATCTTCCTCTTTGTTTTCATCTTCATTCATGCCATATCCTCAATTGAAGGAAGAGGAATTCAGGCACCAGTAAAGGAGGATAAGAAGGCAGAGAAGGTGGGGATGATGATGGGGAGTCAAATCGGGTCGCGGCCGCCGATCTGCCGAAGAAGATGCAGGGAATGCGGCAGCCGTTGCGAGGCAGTTCAAGTACCAGTGGGGCTGCATGATTCACATCAGAATCAAAGAAAAAGAAGAACCCAAGCTTCTTCTAATCATGATGTGGCTCTATCAAGTGAAGATGAGACCTCAAATTACAAACCCATAAGCTGGAAATGCAAGTGTGGAAACTTCATCTTCAACCCATGATGTATCTTTTTTCCCACAATTCAATATTTGAATAAAAACAGCAGCTTGTAAAGATGATCAAAAGCTGGAAATCAGCTCTTCTTCTGATCCAACTTCCAAGGTTCCATGAAAGGAAGGGACAGCAGCTAGGTGAAGTATGCAGAGTTTTAGTAAATGTATCTAAAGGGAAAATGAAATGAGAGTTTGAAAGAGAGGAAAATGAGGTGGCAGTGTTGTGTGTCAGGTGAGAATTCAG

Coding sequence (CDS)

ATGGGCAGCCTTCCAATTTGGCAGAGAAACAAACATGTTCCAATTTCCATCATCTTCCTCTTTGTTTTCATCTTCATTCATGCCATATCCTCAATTGAAGGAAGAGGAATTCAGGCACCAGTAAAGGAGGATAAGAAGGCAGAGAAGGTGGGGATGATGATGGGGAGTCAAATCGGGTCGCGGCCGCCGATCTGCCGAAGAAGATGCAGGGAATGCGGCAGCCGTTGCGAGGCAGTTCAAGTACCAGTGGGGCTGCATGATTCACATCAGAATCAAAGAAAAAGAAGAACCCAAGCTTCTTCTAATCATGATGTGGCTCTATCAAGTGAAGATGAGACCTCAAATTACAAACCCATAAGCTGGAAATGCAAGTGTGGAAACTTCATCTTCAACCCATGA

Protein sequence

MGSLPIWQRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKAEKVGMMMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQASSNHDVALSSEDETSNYKPISWKCKCGNFIFNP

Homology

[Close]

BLAST of Sed0024449 vs. NCBI nr
Match: XP_038886514.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida])

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 97/147 (65.99%), Postives = 105/147 (71.43%), Query Frame = 0


Query: 1   MGSLPIWQRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKK--------AEKVGM 60
           MGS   W R KHV IS++FL V I IH  S +EGRGIQ  +   +          EK GM
Sbjct: 1   MGSFQNWHRIKHVSISLLFLSVSILIHVTSIVEGRGIQGSLTTGRSESPETAAAEEKAGM 60

Query: 61  MMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHD-SHQNQRKRRTQASSN------HDV 120
           MM +QIGSRPP CRRRCRECG  CEAVQVPV LHD SHQNQRK+RT  SS+      HDV
Sbjct: 61  MMRNQIGSRPPSCRRRCRECGGHCEAVQVPVALHDLSHQNQRKKRTSRSSHFSVNSKHDV 120

Query: 121 ALSSEDETSNYKPISWKCKCGNFIFNP 133
           ALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 ALSSEDETSNYKPISWKCKCGNFIFNP 147

[Close]

BLAST of Sed0024449 vs. NCBI nr
Match: XP_004148430.2 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus] >KGN62787.1 hypothetical protein Csa_022255 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 98/150 (65.33%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 1   MGSLPIW--QRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKA-------EKVG 60
           MGS  IW   RNKH+ I ++FL VFI I  ++SIEGRGIQA   E K A       EK+G
Sbjct: 1   MGSFQIWHRNRNKHISILLLFLSVFILI-LVTSIEGRGIQAMEGERKSAEVATEEEEKMG 60

Query: 61  MMMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQ---------ASSN 120
           MMM +QIGSRPP CRR+CRECG  CEAVQVPV LHDS+QNQRK R +          +S 
Sbjct: 61  MMMRNQIGSRPPSCRRKCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRSSSRYFSVNSK 120

Query: 121 HDVALSSEDETSNYKPISWKCKCGNFIFNP 133
           HDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 HDVALSSEDETSNYKPISWKCKCGNFIFNP 149

[Close]

BLAST of Sed0024449 vs. NCBI nr
Match: XP_008444980.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-41
Identity = 99/154 (64.29%), Postives = 110/154 (71.43%), Query Frame = 0


Query: 1   MGSLPIW--QRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKA----------- 60
           MGS  IW   RNKHV I ++FL VFI I  ++SIEGRGIQA   E K A           
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILI-LVTSIEGRGIQAMEGERKSAETVAVATEEEE 60

Query: 61  EKVGMMMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRK--RRTQAS----- 120
           EK+GMMM +QIGSRPP CRR+C ECG  CEAVQVPV LHDS+QNQ+K  RR ++S     
Sbjct: 61  EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFS 120

Query: 121 --SNHDVALSSEDETSNYKPISWKCKCGNFIFNP 133
             S HDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153

[Close]

BLAST of Sed0024449 vs. NCBI nr
Match: KAA0065061.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 3.3e-41
Identity = 99/155 (63.87%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 1   MGSLPIW--QRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKA----------- 60
           MGS  IW   RNKHV I ++FL VFI I  ++SIEGRGIQA   E K A           
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILI-LVTSIEGRGIQAMEGERKSAETVAVATEEEE 60

Query: 61  -EKVGMMMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRK--RRTQAS---- 120
            EK+GMMM +QIGSRPP CRR+C ECG  CEAVQVPV LHDS+QNQ+K  RR ++S    
Sbjct: 61  EEKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYF 120

Query: 121 ---SNHDVALSSEDETSNYKPISWKCKCGNFIFNP 133
              S HDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 SDHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154

[Close]

BLAST of Sed0024449 vs. NCBI nr
Match: XP_022131875.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia] >XP_022131876.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia])

HSP 1 Score: 178.3 bits (451), Expect = 4.3e-41
Identity = 92/152 (60.53%), Postives = 104/152 (68.42%), Query Frame = 0


Query: 1   MGSLPIWQRNK-HVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKAEKVGM------- 60
           MGSL  W RNK H+ IS++ L V IF+  IS  EGRGI  P+ E +K E  G        
Sbjct: 1   MGSLQNWHRNKQHISISLLLLSVSIFVDVISMAEGRGIPTPLMEGRKVEAAGSWPELPEK 60

Query: 61  --MMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQ----------AS 120
             M+ SQIGSRPP CRRRCRECG  CEA+QVPV LHDS QNQRK+R+            +
Sbjct: 61  VGMIRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAATSAGA 120

Query: 121 SNHDVALSSEDETSNYKPISWKCKCGNFIFNP 133
           SN D+ALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 SNKDMALSSEDETSNYKPISWKCKCGNFIFNP 152

[Close]

BLAST of Sed0024449 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.5e-14
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 6   IWQRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKAEK-VGMMMGSQIGSRPPI 65
           +W  N  +   ++ L +    H      GR     V+  K  ++ V MMM   IGSRPP 
Sbjct: 2   VWSSN--MSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPR 61

Query: 66  CRR-RCRECGSRCEAVQVPVGLHDS-HQNQRKRRTQASSNHDVALSSEDETSNYKPISWK 125
           C R RCR CG  CEA+QVP       H       + +S    +  +  D+++NYKP+SWK
Sbjct: 62  CERVRCRSCG-HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWK 121

Query: 126 CKCGNFIFNP 133
           CKCGN I+NP
Sbjct: 122 CKCGNSIYNP 128

[Close]

BLAST of Sed0024449 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05
Identity = 30/82 (36.59%), Postives = 37/82 (45.12%), Query Frame = 0


Query: 56  SQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQASSNHDVALSSE----- 115
           +++GS PP C  RC  C   C A+QVP          R  R    S   V   S      
Sbjct: 46  ARLGSTPPSCHNRCNNC-HPCMAIQVPT----LPTRSRFTRVNPFSGGFVRPPSSLTTVL 105

Query: 116 DETSNYKPISWKCKCGNFIFNP 133
           D+ SNYKP+ WKC C    +NP
Sbjct: 106 DQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Sed0024449 vs. ExPASy TrEMBL
Match: A0A0A0LPQ0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G372820 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.9e-43
Identity = 98/150 (65.33%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 1   MGSLPIW--QRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKA-------EKVG 60
           MGS  IW   RNKH+ I ++FL VFI I  ++SIEGRGIQA   E K A       EK+G
Sbjct: 1   MGSFQIWHRNRNKHISILLLFLSVFILI-LVTSIEGRGIQAMEGERKSAEVATEEEEKMG 60

Query: 61  MMMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQ---------ASSN 120
           MMM +QIGSRPP CRR+CRECG  CEAVQVPV LHDS+QNQRK R +          +S 
Sbjct: 61  MMMRNQIGSRPPSCRRKCRECGGHCEAVQVPVALHDSNQNQRKGRRKRRSSSRYFSVNSK 120

Query: 121 HDVALSSEDETSNYKPISWKCKCGNFIFNP 133
           HDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 HDVALSSEDETSNYKPISWKCKCGNFIFNP 149

[Close]

BLAST of Sed0024449 vs. ExPASy TrEMBL
Match: A0A1S3BBM2 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103488159 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41
Identity = 99/154 (64.29%), Postives = 110/154 (71.43%), Query Frame = 0


Query: 1   MGSLPIW--QRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKA----------- 60
           MGS  IW   RNKHV I ++FL VFI I  ++SIEGRGIQA   E K A           
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILI-LVTSIEGRGIQAMEGERKSAETVAVATEEEE 60

Query: 61  EKVGMMMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRK--RRTQAS----- 120
           EK+GMMM +QIGSRPP CRR+C ECG  CEAVQVPV LHDS+QNQ+K  RR ++S     
Sbjct: 61  EKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYFS 120

Query: 121 --SNHDVALSSEDETSNYKPISWKCKCGNFIFNP 133
             S HDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 DHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 153

[Close]

BLAST of Sed0024449 vs. ExPASy TrEMBL
Match: A0A5A7VH43 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003900 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 99/155 (63.87%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 1   MGSLPIW--QRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKA----------- 60
           MGS  IW   RNKHV I ++FL VFI I  ++SIEGRGIQA   E K A           
Sbjct: 1   MGSFQIWHRNRNKHVSILLLFLSVFILI-LVTSIEGRGIQAMEGERKSAETVAVATEEEE 60

Query: 61  -EKVGMMMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRK--RRTQAS---- 120
            EK+GMMM +QIGSRPP CRR+C ECG  CEAVQVPV LHDS+QNQ+K  RR ++S    
Sbjct: 61  EEKMGMMMRNQIGSRPPSCRRKCMECGGHCEAVQVPVALHDSNQNQKKGRRRRRSSRRYF 120

Query: 121 ---SNHDVALSSEDETSNYKPISWKCKCGNFIFNP 133
              S HDVALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 SDHSKHDVALSSEDETSNYKPISWKCKCGNFIFNP 154

[Close]

BLAST of Sed0024449 vs. ExPASy TrEMBL
Match: A0A6J1BQW9 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111004910 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.1e-41
Identity = 92/152 (60.53%), Postives = 104/152 (68.42%), Query Frame = 0


Query: 1   MGSLPIWQRNK-HVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKAEKVGM------- 60
           MGSL  W RNK H+ IS++ L V IF+  IS  EGRGI  P+ E +K E  G        
Sbjct: 1   MGSLQNWHRNKQHISISLLLLSVSIFVDVISMAEGRGIPTPLMEGRKVEAAGSWPELPEK 60

Query: 61  --MMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQ----------AS 120
             M+ SQIGSRPP CRRRCRECG  CEA+QVPV LHDS QNQRK+R+            +
Sbjct: 61  VGMIRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAATSAGA 120

Query: 121 SNHDVALSSEDETSNYKPISWKCKCGNFIFNP 133
           SN D+ALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 SNKDMALSSEDETSNYKPISWKCKCGNFIFNP 152

[Close]

BLAST of Sed0024449 vs. ExPASy TrEMBL
Match: A0A6J1KP85 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496352 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 91/152 (59.87%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 1   MGSLPIWQRNKHVPIS-IIFLFVFIFIHAISSIEGRGIQAPVKEDKKAE------KVGMM 60
           MGSL IW RNKH+ I  + FL VF+FIH  S  EGRG Q P+ ED+K E      ++  M
Sbjct: 1   MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGRGFQTPLMEDRKVEEQPSTAELVRM 60

Query: 61  MGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQ------------ASS 120
             SQIGS+PP CRRRCRECG  CEAVQVPV +HDS   +++RRT+            +SS
Sbjct: 61  RRSQIGSQPPSCRRRCRECGGPCEAVQVPVAVHDSSHEKQRRRTRRRIRSHFSSEASSSS 120

Query: 121 NHD-VALSSEDETSNYKPISWKCKCGNFIFNP 133
            H+ VALSSEDETSNYKPISWKCKCGNFIFNP
Sbjct: 121 KHNKVALSSEDETSNYKPISWKCKCGNFIFNP 152

[Close]

BLAST of Sed0024449 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 2.5e-15
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 6   IWQRNKHVPISIIFLFVFIFIHAISSIEGRGIQAPVKEDKKAEK-VGMMMGSQIGSRPPI 65
           +W  N  +   ++ L +    H      GR     V+  K  ++ V MMM   IGSRPP 
Sbjct: 2   VWSSN--MSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPR 61

Query: 66  CRR-RCRECGSRCEAVQVPVGLHDS-HQNQRKRRTQASSNHDVALSSEDETSNYKPISWK 125
           C R RCR CG  CEA+QVP       H       + +S    +  +  D+++NYKP+SWK
Sbjct: 62  CERVRCRSCG-HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWK 121

Query: 126 CKCGNFIFNP 133
           CKCGN I+NP
Sbjct: 122 CKCGNSIYNP 128

[Close]

BLAST of Sed0024449 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 9.5e-07
Identity = 30/82 (36.59%), Postives = 37/82 (45.12%), Query Frame = 0


Query: 56  SQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQASSNHDVALSSE----- 115
           +++GS PP C  RC  C   C A+QVP          R  R    S   V   S      
Sbjct: 46  ARLGSTPPSCHNRCNNC-HPCMAIQVPT----LPTRSRFTRVNPFSGGFVRPPSSLTTVL 105

Query: 116 DETSNYKPISWKCKCGNFIFNP 133
           D+ SNYKP+ WKC C    +NP
Sbjct: 106 DQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Sed0024449 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04
Identity = 34/124 (27.42%), Postives = 52/124 (41.94%), Query Frame = 0


Query: 20  LFVFIFIHAISSIEGRGIQAP-------VKEDKKAEKVGMMMGSQ----IGSRPPICRRR 79
           L V+ F+   SS     +Q P        KE  ++   G ++  +     GS PP+CR +
Sbjct: 8   LIVYAFLLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLK 67

Query: 80  CRECGSRCEAVQVPVGLHDSHQNQRKRRTQASSNHDVALSSEDETSNYKPISWKCKCGNF 133
           C +C   C+AV VP+                     + +  E     Y P +W+CKCGN 
Sbjct: 68  CGKC-EPCKAVHVPI------------------QPGLIMPLE-----YYPEAWRCKCGNK 107

[Close]

BLAST of Sed0024449 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 5.8e-04
Identity = 25/74 (33.78%), Postives = 32/74 (43.24%), Query Frame = 0


Query: 59  GSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQASSNHDVALSSEDETSNYKP 118
           GS PP CR +C +C   C+ V VP+                       LS   E   Y P
Sbjct: 60  GSSPPTCRSKCGKC-QPCKPVHVPI--------------------QPGLSMPLE---YYP 109

Query: 119 ISWKCKCGNFIFNP 133
            +W+CKCGN +F P
Sbjct: 120 EAWRCKCGNKLFMP 109

[Close]

BLAST of Sed0024449 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 41.2 bits (95), Expect = 7.6e-04
Identity = 26/88 (29.55%), Postives = 38/88 (43.18%), Query Frame = 0


Query: 45  KKAEKVGMMMGSQIGSRPPICRRRCRECGSRCEAVQVPVGLHDSHQNQRKRRTQASSNHD 104
           K+AE   ++ G  +GS PP C  +C  C + C+ V VPV                     
Sbjct: 169 KEAELRRILRG--LGSSPPRCSSKCGRC-TPCKPVHVPVP-------------------- 228

Query: 105 VALSSEDETSNYKPISWKCKCGNFIFNP 133
                   T+ Y P +W+CKCGN ++ P
Sbjct: 229 ---PGTPVTAEYYPEAWRCKCGNKLYMP 230

The following BLAST results are available for this feature:

BLAST of Sed0024449 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886514.1	1.2e-43	65.99	EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida]	[more]
XP_004148430.2	1.0e-42	65.33	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus] >KGN62787.1 hypothe...	[more]
XP_008444980.1	2.5e-41	64.29	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo]	[more]
KAA0065061.1	3.3e-41	63.87	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa]	[more]
XP_022131875.1	4.3e-41	60.53	EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia] >XP_022131876.1...	[more]

BLAST of Sed0024449 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T068	3.5e-14	37.69	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	1.3e-05	36.59	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Sed0024449 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPQ0	4.9e-43	65.33	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G372...	[more]
A0A1S3BBM2	1.2e-41	64.29	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103488159...	[more]
A0A5A7VH43	1.6e-41	63.87	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1BQW9	2.1e-41	60.53	Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1KP85	1.1e-39	59.87	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Sed0024449 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37810.1	2.5e-15	37.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G10310.1	9.5e-07	36.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G22820.1	2.6e-04	27.42	allergen-related	[more]
AT4G14723.1	5.8e-04	33.78	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT2G30370.1	7.6e-04	29.55	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 57..132 e-value: 1.9E-17 score: 62.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..109
None	No IPR available	PANTHER	PTHR33109:SF54	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2	coord: 8..132
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 8..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024449.1	Sed0024449.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0110165	cellular anatomical entity