![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0024422 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCAAACAAATAATTTATTGCATGTACCTGAAAGACATATTACAAGAAGTAAGGCAAAGAAGATTCAAAAGGCTTATATATTACATCTTCAAATGCTTGCCAATGCAAAAGAAGAGATAAAGCTTTTTCATTCGAAAATTATTTACACCATTAGCACGAAAAGTGAAGAAGAGATTGAAGTGAAGATGGCATGAGAGTAGATTTATTTTGGAAGATGACAATATGGTAGAATTTTAAATAAAGAAATTTCAAGATTTCTTATTTTGAGACTTTTTTATTTCAATACTTGCCAACCATGCTCATAATTACAAGGGACCTTCTAGAAGAGTTGGTTGAGTCTATTTAAAGCATATCTACCCTTTTGTCTAGCATTTAAGCCATGCAATTGAGTTTTGGTTTCCTAGGCCTTATTTTCTACAAAATGCATTTAATAGCTTTTTAAGTCCTTTTTGTATTCCAAGGCATGCACGAATTTTTTGCTTTAAAATGAATTGCAATACATCATTTTGGATAGATTTATGAATGAAAAAACTTGTGTTTTCTTGAACCCCATTTGGTGTTTCATTTCTTTCAAATCTTGCTTTAGGTTTGAAGTTAAATCAATTCATTGGATTAGTCTCGATCAAGCTAATTCTGGAGTGAGTTGTCTTAGGATCTAAGAGTGACTATTTTAGATTTTAAGTGTGATCTAAGTTAGCCTTCATTGTGAGTTTTTGCAAGGATTCTAGAAGGACCTCTAGCTTTGTAAATTTCAAGCAACATTTTGGCGCTTATCATTTGGTATCAGAGCATTTGATAACATTCTTTGGCCGAATCTTGAGGTGAACTATCTTTACTTTGTGTTAGTTTGTTATTTTTTATTTTATTTTTTTATCTCTTTCAATTTTCTATTCAAGCAAGTACATTTGTATTCTTTAGAAGTACTTTGTAGAATTCATTTGTATTGCTCTTGGATCATAAAATTTTTTTAAAAAATAAGTAGAAAAAAAAACAGTAGCAAAAAAAAGAAAAAAAAATCTGTAGCAAAAAAAAAACAATCATTGACAAAAAAAGTATCAAAGATCCAAGGCATATTGAAGTTCTTGTTATTTGTTTATGTTTTGTTTTTAATCAGTTGTTTATCCTAAGTTTAAATACTCTAGTTTAGTTTGTGAAAGTTAATTGTTGAATTGGTTTTATATCAAGTTTAAAGCAAGATTGCACCAAATATTTTTAGACCTGCCCTTACATTTTTTACCTAGTACCAAAAGCCTACCTTTGAGTGTTAAACACGAGTGTCCCGAGTGAAATCTTTGTGAAAAGTGTGGAGAGGTCCATTTTGATATTTGCAACATGTCATATAATGAGGAAAAACCACCACAGGTTCTGGATGTTAATGTTGCTATTCTTCAAGCCCTTCAAGGTGGGATGGAAATGATGAGGGAAGATAGAGAGGAAAGGAGAGCACATCACCGACGAGAAGAACGAGCATTGCAAGATGATGAAGGTATGTTAGACTTGGTTGGACAAGAGAGACTAGGTGGAGGAAGAGGTAATGCAAGGGGAGGAAGAAATAATCATGCAAAGATCATGCAACCTAGAAGGATAGAAAGAATGCATGAAGATAGAGAAGCTGGAGTTAAACTTAAAATTCCACCCTTTAGTGGAACGGCGGACTCTAAGGCATATTTGCAATGGGAAAGAAAAATAGAACATGTGTTTGATTGTAATTCATATAGTGAGAACAAGAAGATGAAGCTTGCTATTGCCGAATTCACAAACCATGCCGGTGAATGGTATCAACATCTCAAATCCGAAAGAAGAAGAAAAGAGGAGGATCCAATAGAGACATAGGAAGAACTTAAAGAAGCTATGAGAAAGAGGAATGTTCCCAAACATTATGAAAGAGATGTGAAAACTAAATTGCAAGCATTGAGGCAGGGAACAAAAAGTGTGGCTGAATATTATCAAGAGATGGAATCGTTGATGGAAAGAGCAAAAATACGAGAAGACGAGGAGGACACCATGTCTAGGTTTCTTGGAGGTTTAAATCTAGAAATTGCTCATCCGGTTGATAGGATTCCACCACCTTACCTTGAAGATATGTATCATTATGCCATAAAAATTGAAGCACAATTGAAGGAAGAAAATGAGCATTCAAAAAGGTATTCATCTAAACCTCATACTTTTTCAAATTCTAATACTTGGAGCAAGGATAGTTTTGTGCATAGGAATGAATCAATGCAACAAAAAGGAAAGTTTGGGGCTGCCAAAAGAGTAGAGGCCGAGAGCTTCAATACTAAAAAGAATGAAGTTCCAAATTGTAACGGCCCAGGTTTTCATCCCGGTCTTTCAGGTATGCCCTGGGGGTATTTTGGTAATTTGGTCGGGCCGTCAGGGCCGTTTATGTCTTTTTCCAGTTGCTAAAATTATTGGATGGGTTATTGTAAGTTTTTAAGGCTTTGTGGATGTGTTTGGGCATGGTTAGATGTAAAAGTAAAAATGTTAGTAAATTGTGTTACAACTGGGATTCGAACCCGGGTCTCCGGGAAAGCCTGTTGGGATGTGTGCCAGTTGAGCTATTGGGAGTTCTTGTTACTTTTTCTGCGTCATATCTTGGTTAACCTTGGATCTTTGGAGTTTTGGTGCATTTGATTAAAAGAAAAGAAATGTAGGGTTTTGGGTCTTCTTCTCCAAAAGTCTCTTGGCCGCCCAAGCTTTGCTCCCTAGCTCCCCAAGCCGTTTTTCATCTCCTTAGCAGCTCCGTGGTTCGATCGTCATTCCGGGTAAGTCTTCATCCTCTTCATCTTCTCCATTAGGTGTCCTTGCTGGCCGAATGTAAAGAAAGGGGTGGTGTGTGTGTGTGTGTTTTGTTGCAGTGCCAAAGACACCAGATCGCCAAAGAATGAGCAGCGAGCCCCAAGACGCGCCAGAATCGCCCAAAGGTGAGGCTGGACCGCCAAAGACGCCCAAATCGCGGTATCGCCGCCGACCCGCCTCGCGCCGACGCTGCAAATGTGCCTGTAGCACGCACCAGACCCCGTCGCAGCCGCCCAGACGCCCAGATCGCCCAACCGAGCTCGCGCCTGCACTCTCGCTCGTCTGCGTCCGCGTCGCCAGCGCCTGCGCGCCCGTCGCCGTCCCAGCGCGTCCGCTTCGCCAGCGCCCGCGCACCTGTCGCTGTCCCAACGCGCCCGTGTCGTGCCTCTCGCCCGCCAGCGTCCAGCTTGTCCACGCCCGCGCGCTGCGCCCGGCCGGCTTCGCCGCATGCGTCGCGTCGCTGGCCTCGCCGCCCATCTGCGCCATCAGCGCCAAAGAGCCTCCCGCACGTGCAGCCTGTCCGTCCCCGCGTCAGCCGTGCCTGGTTCAGTAGTGAATGGTTTCATTGTCTGGTTCAGTAGAGATGCTCCATTTATGTTGTACTATACACCATAGTATCATCAAAATAAAAAAACAAAAAATCAGCTTGGGAATGGTTTCATTGTCTGGTTCAGTAGTGATAAGCGTCAAACGTTGCTTGAATTTTATAGAGCTAGATGCCCTTCTAGGATCCTTGTAAGAACTCACAAGGATAGCTAACTTAGATCGCATTCAAAATCTAAATGGTCACTCTTTGACCCTAAGACAGCTCACTCCAGGATTAGTTTGATCAAGACCAACCCAATGAATTGGTTTAACTTCAAACCTGAAGCAAGATTTGAAAGAAATGAAACACCAAATGGAATTCAAGATAACACGAGTTTTTCAATGCATAAATCTGTCCAAAATGATGTGTTACAAGCCATTTTTTAAAGGCCAAATATTCGTGCATGCCTTGGAATACAAAAGGACTCAAAAAGCTGATAAATGCATTTTTGTAGAATATAAGATGTAAGAAGCCAAAAGTCAATTGCATTGCTTAAAATGTTGGGCAAAAGGGTAGATATGCTTTAAATAGACCTAACTAACTCTTTTAGAAGGCTCCTTGGAATTGTGAGCATGGTTGGAAAACTTTGAAATAAAAAGCCCCAAAATATGAAATCTAGAAATTCCTTTATTCAAAATTCTTCATTGTAATTTCAAAGCCTCCAGGAATCTTCTTCTACTCACTTGTTATAACAGCCCCTTCACGAGAATATAATAACTTGGTGGTTCGATTCGTACTCTTCTTCCTTGGGATGAAATCGTCTTGTTTTTGGAGTTTTTGGGTTTGAGTTCTAAGGGTCTTGTTCTTAAATGTAAAGACCCGACCCGAATGGGGTTCTAAAATAGGCCTTTACCTCAATGCATGCGATCAAAACTAAAATCAATATGCAGGAATGGTTTTCGGATTCTAAGTGAAAACTAAAACATGCAAACAACCATTTGAAAAGTCAACATAAAATTCCTGAAACCTGTCCCTGTTTCCAAGCACCTGTTCCAAGACAAATACATTTCCAAAACTCACTCTGATCAGAGATTTATTTAAAACATTCAAAACTTTCCAATAGTTACAATAGTGCTAGAATCCGGAAATACAGTCAGAAAACAACCTAGGGCTCCGTGCCCAACTACATGCATTCAGAGGACATTTAAAACATAAAACATAAATACAAGACTCAGAGTTTGAACAACGGGTTTCCATGATCACAGCTCCTCCTCCAGCCATCCTGTCTCGCACCATGGTTACCTGTGGAAAACTACAAAATAAGGGTGAGTAACGAATTACTCAGTAAGAATCCCCAACCGAGGTACAATACGATATACATGGTCATCTAGCAGAAAGGTATGCAAGCTATGA ATGAATCAAACAAATAATTTATTGCATGTACCTGAAAGACATATTACAAGAAGTAAGGCAAAGAAGATTCAAAAGGCTTATATATTACATCTTCAAATGCTTGCCAATGCAAAAGAAGAGATAAAGCTTTTTCATTCGAAAATTATTTACACCATTAGCACGAAAATTAAATCAATTCATTGGATTAGTCTCGATCAAGCTAATTCTGGAGTCCATTTTGATATTTGCAACATGTCATATAATGAGGAAAAACCACCACAGGTTCTGGATGTTAATGTTGCTATTCTTCAAGCCCTTCAAGGTGGGATGGAAATGATGAGGGAAGATAGAGAGGAAAGGAGAGCACATCACCGACGAGAAGAACGAGCATTGCAAGATGATGAAGGTATGTTAGACTTGGTTGGACAAGAGAGACTAGGTGGAGGAAGAGGTAATATCGCCCAACCGAGCTCGCGCCTGCACTCTCGCTCGTCTGCGTCCGCGTCGCCAGCGCCTGCGCGCCCGTCGCCGTCCCAGCGCGTCCGCTTCGCCAGCGCCCGCGCACCTGTCGCTGTCCCAACGCGCCCGTGTCGTGCCTCTCGCCCGCCAGCGTCCAGCTTGTCCACGCCCGCGCGCTGCGCCCGGCCGGCTTCGCCGCATGCGTCGCTAACGAATTACTCAGTAAGAATCCCCAACCGAGGTACAATACGATATACATGGTCATCTAGCAGAAAGGTATGCAAGCTATGA ATGAATCAAACAAATAATTTATTGCATGTACCTGAAAGACATATTACAAGAAGTAAGGCAAAGAAGATTCAAAAGGCTTATATATTACATCTTCAAATGCTTGCCAATGCAAAAGAAGAGATAAAGCTTTTTCATTCGAAAATTATTTACACCATTAGCACGAAAATTAAATCAATTCATTGGATTAGTCTCGATCAAGCTAATTCTGGAGTCCATTTTGATATTTGCAACATGTCATATAATGAGGAAAAACCACCACAGGTTCTGGATGTTAATGTTGCTATTCTTCAAGCCCTTCAAGGTGGGATGGAAATGATGAGGGAAGATAGAGAGGAAAGGAGAGCACATCACCGACGAGAAGAACGAGCATTGCAAGATGATGAAGGTATGTTAGACTTGGTTGGACAAGAGAGACTAGGTGGAGGAAGAGGTAATATCGCCCAACCGAGCTCGCGCCTGCACTCTCGCTCGTCTGCGTCCGCGTCGCCAGCGCCTGCGCGCCCGTCGCCGTCCCAGCGCGTCCGCTTCGCCAGCGCCCGCGCACCTGTCGCTGTCCCAACGCGCCCGTGTCGTGCCTCTCGCCCGCCAGCGTCCAGCTTGTCCACGCCCGCGCGCTGCGCCCGGCCGGCTTCGCCGCATGCGTCGCTAACGAATTACTCAGTAAGAATCCCCAACCGAGGTACAATACGATATACATGGTCATCTAGCAGAAAGGTATGCAAGCTATGA MNQTNNLLHVPERHITRSKAKKIQKAYILHLQMLANAKEEIKLFHSKIIYTISTKIKSIHWISLDQANSGVHFDICNMSYNEEKPPQVLDVNVAILQALQGGMEMMREDREERRAHHRREERALQDDEGMLDLVGQERLGGGRGNIAQPSSRLHSRSSASASPAPARPSPSQRVRFASARAPVAVPTRPCRASRPPASSLSTPARCARPASPHASLTNYSVRIPNRGTIRYTWSSSRKVCKL Homology
BLAST of Sed0024422 vs. NCBI nr
Match: KAA0051908.1 (putative gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. NCBI nr
Match: TYK22420.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. NCBI nr
Match: TYK26105.1 (F15O4.13 [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. NCBI nr
Match: TYK02449.1 (F15O4.13 [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. NCBI nr
Match: KAA0067528.1 (uncharacterized protein E6C27_scaffold50G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. ExPASy TrEMBL
Match: A0A5A7VII0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50G00510 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.2e-12 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. ExPASy TrEMBL
Match: A0A5D3DRJ1 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.2e-12 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. ExPASy TrEMBL
Match: A0A5D3C3D3 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001490 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.2e-12 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. ExPASy TrEMBL
Match: A0A5A7U9D0 (Putative gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G003610 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.2e-12 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Sed0024422 vs. ExPASy TrEMBL
Match: A0A5D3CK70 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.2e-12 Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|