Sed0024378 (gene) Chayote v1

Overview


Name	Sed0024378
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cell cycle checkpoint control protein RAD9A isoform X1
Location	LG11: 3492822 .. 3501988 (-)
RNA-Seq Expression	Sed0024378
Synteny	Sed0024378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGTTATACAATTTCTCACGCCATTTTTATTCACGGCGAACTCTTCGTTGTTCCCGTCAAAACAAAACCAGTGCGATTCTCTGTCTCGAACTCAGATCATCGACGCCGGAAGAGCGAGATCAATGGAGTTTAGTCTGAGCGGAAACGCTCTCAAGACCTTCGCCCGCTCAGTCACTTGCCTTGCTCGGATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGGTACTCCATTTTCTCCCTTTGCTCTTTCATTCCCTCATTTTCCACTCACAATTCGCAGTTCTAGGAGAGTTTCATCACAAATTCTCACTCACTTGCATGCTCGTATTTGTTATTAACACTAATTGCAGTGCTCAATTTTGATTCATTCCAAATTTAGGTGGAAATAGCTGTGTCTGTGTTAGCGATTCTCCAAATTGTACGTTTCCGGTGGATTTGTATCCAATTGATCGACTATTTGTGGATGTAGAACGTGATTAGCGACTTTAAGCGAAATTAACTTCTATAGTTTTTTGGAAACCGATTTCACCCAAAAAAAGAGAAAAGAATCCAAGATATCAGTTTATGTTAAAATGTTTTGAACTATGTTGCTCTATGAATACTTGGTTTGGGGTCTCACTACCTTGTCATATGTTGTGTTGAAGTTTTATGAGGGGTGAACTGGATAAACTTTCTTAAAACCCTTGTCCTGTTTGTTGGATATTTGTATTTTTCACGATCTTCTAAATAAATTTATTCTCTTCTCTACCTGTGAACGTAGCTAACACAACATTAGAGAATCATGTAAATCCGTGTGTGTTTGTCTTGGATTTTTTTAGTTCTTGATTGTTGGTTAATTTTTTTTTTTTATATAACAGTCCAAGTTAGTGCATCAGCATCACACAAATCCTTAACCATGTTAGAGGAGAAAAACCAAAATGTTTAAAAACCATGCAAAAGAGAGGTCCAATCCAAGCAAAAAACTTACGACATCCTTTCAATTTTAGGCTCTTGTAAAAGAGAGACTTCGTATCCAAGGGGTGGCGCGGTGGTCAAAGGCTTGGGCTTTGAAGGTGTGCTCCCCTCAATGTCCCAAGTTCGAGACTCACTTGTGACATTAATTTGTAGTCACCTCTTGTGTCTCCATTCCTTCGATGTCTTCTGGTAGTGGCTTAGGAACAGACATGGTCACCCCGAGTATAGTGCAGTGAAGCTCTGATGTCCCGATTTCCTAAAAAAAAAAAGACTTCTTCATCTAAGAAAATTTAGCCAAGAAGCACTTTTCCTTTCCAGCTGCCAATAGCCTGTGGGAAAAGAAAACCAATATTTTCATTCTCTTCTTTCAACCATTTGATCTTTCCTATTAGAATTGCTCTCATCTTATTCTTAAAATGAAACAATAGTTTTCTTGCTATTTTTGTTGCAATTGATATCTCCTATCCTCGAGAACCCTCTTTTGTCACTAGCACGAGTTTTGTTAGCAACATATCCTGTCTATCCTTTTTCTTTTATCATATCTCAAAATATAACTTAATATACATAATTATGGCGTTTATTCTATATATGGACTTCCTTTTGAAATAGGAACTAGTAAGCAATCTGTTGGGAAAAAATGGAATATGAAGTGAATATTGCGGAAGCAAAAGTCAAATAAAAGTCTCAATGTTTGTTGAACAAAGAGAGAAAATGTGAGAGTGAAACAAATAAGAATATGTTTCTATTAGAAATGAGGAAATTGGTGATACAAACTTCTCATGGAAGTTCACCCTTTTATAGGTACAAAATATGGAGCCTATTTAATTTCTATAACTTAAAAATTAAAAATAGAAACTTAAAACAACTCAAAACATAAAACTTACATGGAGTTAAGTTATCTTGTAAAATGAAACTTAAAACAATTAATAAAAAAAAAACATAAGCCATAAATAAAATTGAAAATAATTAAAAAGAAAAAACTCATAAACTTTAACACAATCTTTTCATTGATTCATGAGTTACAAGTAAAGTTTAGAATTGAACCAATACGACATGCATGCAGCTACTCCCCAAGGTAACTTACGTAAAATCTCCATCTGTATCTGGGCTTACTTTTTACCGCTACCAAAATTGATTGAACTTTGTGACGTCGAATTGTAAACAAGATGGAAGTAACACAGCCAAAATCTGGAAGCTTGCTTAGCTTGTTGAGTTTTTTTGGTATGGCAATTATATGAAAGGATCATTTTTAAGGCTGATCATTTTATTTTCAAGTTCAGCTTGCCTTTTACACTCTCAATGCATCACGGTCTGCCCATCAAGCTATAACATTTGAGCCTGGGTTCTTTGATGCTTATGTCATTTCTGGTGATCAAGTGCAGTGCAGTGTTCTTTTGAAGGTATGCATGATATTCTGTTGTATTGTATCTACAAACAGTACGCACCTATGCTTACTTATTATGCCATGCTATGTCAGGCTGTTTGCTCTGTTCTTAGAACACCAATTGCTAGTGTAGACCATCTGAAAGTGAGGTTACCAGATCCTGATGCATTGAAAGTACAATGGAGTTTGGAATGCTTCAGCGGTCAGTAGCACTTTTGAGTATATATGAGTATCCACTCATTTATCTAAAAAACATGTTGAAGTGATCTTTTGAGTTTATATGAGTACTCACACTTTTATCTAAAAACCATATTTCGAATGATATATCATCATTGGTAAATGCAGATGCTGACAAATTAAGAATGTCACACAATGACTACTAACTTGCATGGTTACAATGTGTTGATTATAATTCATCTGATAACTACGACTGAAGAGGCAACTAAAGCAAATCAAATATTTTTAGTATCATGCAAGCAAGGCATAGAGCACCATTGCATTCGGTTTGCAATTATGCTGGTAGTTATGCTGAAGAAGAGAGGGGCAATAACTGTAAAACTTTGGGATATATCTATTACGATGTCCAATAAGCAAAATGAAGAAAATGCACCATGATGTTGTCTGTTAACATGTACGTTTTTTATTCATCCAGTGATCAAGGGTCTAGATTACCAACTTGTTAAAATTGGGCTATAAAAAAGTGATGCAACAAGGATCACTGGTCTTATGAAATGCTTTTATATTTGCAATATCATATGGCTTTATAGTTCCACAATAAATTTTATTTTAAATGCCTCGATGTTACCTGGCTTGCAGGAATGAAGAAAACATACTGCATTTCTTGCAATGTTGAGCCAGACATACAACACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATAGATTACTCTCTAATTTCCAGTCATCCTTGCAGGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAAGTGAGATTGAAGGAAAGGCTGTTGAGCTTAGAAGTTATATAGACCCAACCAAAGGTGTTAATGATAAGTACAAGCCTAAATTAATTAACTTATCTTACTATAGGATTTTTTTTTTCTTCTAATAAACGCCTTAAAAGATGTCGACTCCTTAGAATTTGTTACTTTTCCACGAATCTACCAAAATTTAGGTTATGCTTCATTTTTTAACTGCAGACAATGATGCGCTGCTTCATACTCAACTTTGGATAGATCCTATGGAAGAGTTTGTTCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGTACTTTGATTTAAGCATTGGAACATCCCTTGTTGATAAATGCAATTTTTGTTTTTGAGTTTGGAATGCTGCTTTTCTGGTGGCACTATTAACGTTTTCTTCTATAGCTTTGTGGTGAGTTGATACTATTTTTGTTATTTTTTTTTACAATCTTGTGCTATACTATATTTAGGAAGCATAATTAGTTTACAGCTTCTATTTTATACTCATGGTTTAAGCATTTTTTTAAAGCTATTGTCATCATCAAATTTCAGGCATTTCTTTCTTTTTGCGAGGGCTGTGAAGTTGACATCCATCTGTATTTTGAAAAGGCTGGGGAGTAAGAATTGCACATGTCTCTTGTCCTGTTCCTTTTGTTGGGTTATTATTATTTCTTTTGCTTTCTCTTTTACATTCTTTTCAGTATGTTCTCAATTTACATAATAGTTAAGGTCCTCCGACTTCTAATTGTCATCGTGGTGCTGAAACACCAGGCCTGATTCTTCTAACTGCTTGATTTAGACTTGAAAATCTTTAGTTGATTTCTGGTTAGCACTTAGGAACTAGGATTCTGAATGAATTATGAATATGAGAGAAACAGATGATAATAAGTGAACCAGATTTTCCTGAATGATATCTTTTTTATGGAACTGCAAGGTGTATTCATTTCTACATGGTTAAATGCTAAATGCCACGTAGGTCTGGTGGAAAGTTACATGCAGTTTTGACTCTTGTAGTTTATGGACTATTTGTCTTAGCTCCCACACGAATCCATCCTCTTCTAAATTTAAAAAGTAATTTGTCTAGCCTGGTCAAGTCATTTATGGTGCAAATAATTTTCATACAAAGTAAGCTTTGTTATCGAATATGATAGGATTTTGTATTTGGGCATGCAGGCCAATTCTAATGGCACCAAAATTTGGTCTAGATGATGGATCCGGTTCAAACTTTGATGCTACACTTGTTCTTGCTACCATGCTAGTATCACAGCTCCATGCGGGTAGCCGATCACAGCCTCCACAGGAGGCTACTACTGGGCATGGTGAACCTGATCACAGGGCTGGATCCCAACTACAGCAGGATGGGTCCAGAGCTAATGTTTCTGGGCATCCATCTGATCATACCAGAATATGGTCTGAACTCTCAGGTCTCTATTTTTATTCATACATGAACCTTTCTGTATCACTGTCATAATATCTTTGGTTTTCTCATTTGAGATAGAACTTGGAAAATAAACTGTTTTGTATTTGAAGTCATCCTTGAACCTTTTTTTAGGAAGTGCACCAAGAAGTGGTAATGGTGCTGAAGGACAGGTACAAGGTGAGAGAAATTTGAGTTCTTCTGAACAGATGGAAATTCAAAGGATTAGTAATATACATATTTCAAAAGATGGGCGTGCTCAAGAAAATAACCCTATTGATCGTGCAAGGTATCCTTTACATTACAGCTTGTTTTCATATAGATTAGTTTTGAAGCGATATTCTTGTTATGTTGTTTATATGATGATGTCTATTCTCTTTTTATGAATTTTGCACCGATACATGAATGTTCGTTTACTGAATAAAATTGGGTAAGATGACTATACCTTTGCTGATAGGATTAAACATCTATACCTTCCGTCTAGCATATTCATAGTATTCGAAGGCCTTTTGGAGCTAACTCGAATTTAGAACCTATTCTATCCGAGTAAATTTCTTCCATGTTCTTTTGGACTGGACGAGGTCTTGTAAATGGAATAATGATATTCGTGCCGGATAATTATGTCCTTTCACTAGCTATATCCAAATATTGAGTACTGCATGCCTACAAAGCACTTGCTTGTCGTTGATGTACAAAAGTGCTCACCAAGAAAAAGATGAACTTGTATAATGCATTTTGGGGGTGTTTGAGTCTGTTTTAGGGTGGATTTGGTTGAATTATAATAATCCAACTTATATGTGGACCACCGGTTATTATAGTTGTTTCATCCCAACTATAATAACCCCAACCTTTTTTTAGGAACCAACATGTTATAAGCCACCAAGAGCAACTGCTCAACCAACACAATTGTGTGCCCATGACCTAGAGGTCAAGAGTTTAGATACCCCATCCTCAGTTGTTGCTGAACTATAAAAGTTATCTCATGTTATTATAACATGACCTCCAAGTTATTATAACTTCTCCTATTTTAATAACCCACTGCTTATATCAATCTAACCGTCGTCGTCAAAGCACGCTTAGCTTAACGGTAATTGACATGTATTCTGGACTTAAAGGTTGCAGATTTGGATCCCCTAACTTTAAATATTGTTATACTAAAAATAATAATCCAACATTGTCCTCAAACACACCATTTATTTTAACAGAGATATTACAACTAATATAAAATACCCAAAAAGTGGGCAGAAGTTTAGTAAATTATGGAAAAGTTTAATGAAGTACGGGTTACATGATTGATTAGACACTGCAGACTGAAAAATAAGGAAGAAGACTACAACACAGGTGGAGGCATATCACTGTGCAGCAACAGTATTATGTCGTAACTATAGACTGTAACTGCACTCACCTTAGAGATCATTTCTAATTTTTGGTTCTTCAAATAATTTTTTTCTCGGGATTATTTTATGTTAGTTTGTAAATAATTTGACTGTTTAATGTAGTGACCACCATTTTGTGGGAAGAGATCAAGGAAGAGAACGCCAAGGTCAGTAGATACCTCATTAGTCATTATGGGGCTGTTTGTTTGCCATATTTAAGGGGGATTTAGGTGGAATTTACTAACTACTCCTTGAAAACCTACATTCAAACGAGTTTTTACCAACTTCTTCTCTTTTTTACTTTTAAAAATAACTCTATTTCTAACTATTCATTTCTGATTTCATTTATAACTACTTTATCATTTCTAACCACTCATTTCTAATCATTCATTTCAAATCAATCAAAATAACTCATTTTTAACCATTCATTTTCAATCGTTTTTCTTTTTACTCATTTTAAATTTACATCAAAACAAGGTTTTGACTCTAACTCCTCGACACAAAAACCACATCCAAACAAGTTTTTGCTACAACTCTCAATTCTTAACTACTCAAAATAACTCTAAAAGCTAAATCCTCCTTAAATATGGCAAACAAACAGCCCCTATATAACCCTGTGTATCTTGTTACACCTGCTGCTAACACAATACTTTCAGAGATGTCTGATATCAATGGTCCTGCCGTTTCGCAACATCATCCCAGTAACTGGGTACAAGAAGAAGATGAGGATGATGATAACGATGATGGAGATGATAGTGAATTGTGTGTTCAGTCAACTCCACCATACTGTGAAGAACACTAGAAAACAGGTATTTTATTTTTGTCTACATTGAATTTAGCATCTACTTTTTTGTTGGCTCATGAAAACAGTTTTAATATTGAGCCTTATCCTGTAATTACTTTCAATCCAGTATATTTGTTCTGTTTGACTCTGCTCACTGATTGCAAGCTTAGTAATGTGATCCCTATCTGTCTGTTCTAAAATGATCTGAACTATGTTACTGTCTGGGTTTGACATGTACCTTTTCCAACAACTCAGTTTGATAATGTTTTTTTTTTAAATTACACATACAACATCTACTCCGACGAATGGTTTTTCTTACTTTGATATCTACATTTTACCAATGTTTTTAAAAATCAAATCAAAATTTGAAAACTAAGTCTCCATTTGATAACCATTTGGTTTTTTTTTTTTTTTTTTGAAATTTGAGCTTACAACTACTACCCAATGCATAGTTTTCATTACTTTGATATCTACCTTGTACTTTTGTGTTCAAAAACAAAACCAAAAGTTGAAAGCTATTTTCCAAATACATTGGTTATGGAATTTGGTTAGAATTTACATAATTCCTTAAAAGAAGATGAAACCATATGTAGAGAATTTGAGTTAATGCAAGCTTAAATTTCGAAAACTAAAAATGAAAAACTTAAAGCCCCATTTAATAACCATTTTGTTTTTGAAATTTAAGCCTACAACTACTCCTCTATGGTTTTTCTTACTTGGATATCTACATCTTACCTATGTTTTTAAAGTCCAAACCAAAATTTGGAAAAAAAAAGTAGCTTAGCTTCCGAAGCTTGTTTTGTTTTTTGAAATTTGGTTAGCATTCACATACGTTCTTAAAGAAAAATGGAACATTTAATAGAAAATTTTATTAAAAATAAGTTTAAATTTCAAAAACCAAATAATTATCCAACTAGGCCTAAAATGTAGTTTCTAAGCACTTGTTTTTGTTTATTAGAATTTGGTTATGATTCAAGTACACATTTTTTAGAATCCCATTCTCTCAAATACTTTTGAACTCAAAAAACAAAATAAAAGTTACAATAATGGACTCCAGTCTGGATGTGTCAATGTCATGTATTTCTTGTGGTAAGTTAAATGTTAAATGTTTTTTCTTCTTTTTCTTATAAGCATGCGTTTTTTTCCTTCTTTTTTTAGTATATGCTAGTATTTAGGCTAGCTTGTTTGCTATTTCGACAACTCTCATGGGATAACTACATTTCTTAAATAATTGGCTAGGAAAGTAAATCTTAGAATGTCAAATTTTAGGTTAAACCCATTCTTGTTTAAATCTTTATTATTTACGTGACCCAACTGATGATTTGATGTATTTTTTTCTTCTATGCAATTTGTATATGCTGGAAAGAACAACCAAGTGAGATTTTTTGGAATATGTAGTGCCCAAGGGGTGCAGTGGTTGAAGATTTGGACCTTGAGGGTATGCTCCCCTCAAGGTTGCGAGTTCAAGACTCTCCTGTGACACTCCTTCGATGTCTCCGGTGCCTAACCTAGGGACGGACGTGGTTATCCTTATTTCAAAAAAAAAATTCCATTTCTCCTGCATGATTGAATTTACATTTTGACACATGACCAGTTGTCTGCTTTCTACACTATACTCATGCGTGCCTACCTATATACCTAGTAGATTCACTCTTCTAAGTTCGAAATACATAATTTTTACGACGTTAAATCATGGACCCAGCTCTAGACGATGCCATTGCGGATGCTCGGTCTATTGGTGGAAATGTAGTGCAACATCAACCTAGACGTGAGAAGATGAGGTCGAGGAGATGCCAACTCTCTCATTTAGCTGGTGGTATCTGTATCCTTGTCTTAATCATAGGGTCAATTTGGTCATAAATTGTTAACCTTTCAGCCTCCAGTCCCCTCTACTGTTCCAGTATTGTTTAAACAAAACCAGCTGTTGGTTTTGGGTGGTTGTATTTTCTTCTTTTGCATTAATTTCAGGTATTTTCTAATGTCTTCTTTTAGATATGATGGCCATTCCGTGAAAGCTGGAGCTTTTAAATCTAATCTTAGGTAGAAGGGCAAACGTTTTATTGAAGAGAAAAAAGCCTGGTGAGCTTTCTTCTAATTCTCACTCTTAAATTGCTCAATTAGTCATGTTTTAAAAAATGTTCGTGAGTATTTGAGTCAGCTTACGTGCACCTCGAATATTCTCATAAAATATATTGTTTGACC

mRNA sequence

AAAAAGTTATACAATTTCTCACGCCATTTTTATTCACGGCGAACTCTTCGTTGTTCCCGTCAAAACAAAACCAGTGCGATTCTCTGTCTCGAACTCAGATCATCGACGCCGGAAGAGCGAGATCAATGGAGTTTAGTCTGAGCGGAAACGCTCTCAAGACCTTCGCCCGCTCAGTCACTTGCCTTGCTCGGATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGCTTGCCTTTTACACTCTCAATGCATCACGGTCTGCCCATCAAGCTATAACATTTGAGCCTGGGTTCTTTGATGCTTATGTCATTTCTGGTGATCAAGTGCAGTGCAGTGTTCTTTTGAAGGCTGTTTGCTCTGTTCTTAGAACACCAATTGCTAGTGTAGACCATCTGAAAGTGAGGTTACCAGATCCTGATGCATTGAAAGTACAATGGAGTTTGGAATGCTTCAGCGGAATGAAGAAAACATACTGCATTTCTTGCAATGTTGAGCCAGACATACAACACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATAGATTACTCTCTAATTTCCAGTCATCCTTGCAGGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAAGTGAGATTGAAGGAAAGGCTGTTGAGCTTAGAAGTTATATAGACCCAACCAAAGACAATGATGCGCTGCTTCATACTCAACTTTGGATAGATCCTATGGAAGAGTTTGTTCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGCATTTCTTTCTTTTTGCGAGGGCTGTGAAGTTGACATCCATCTGTATTTTGAAAAGGCTGGGGAGCCAATTCTAATGGCACCAAAATTTGGTCTAGATGATGGATCCGGTTCAAACTTTGATGCTACACTTGTTCTTGCTACCATGCTAGTATCACAGCTCCATGCGGGTAGCCGATCACAGCCTCCACAGGAGGCTACTACTGGGCATGGTGAACCTGATCACAGGGCTGGATCCCAACTACAGCAGGATGGGTCCAGAGCTAATGTTTCTGGGCATCCATCTGATCATACCAGAATATGGTCTGAACTCTCAGGAAGTGCACCAAGAAGTGGTAATGGTGCTGAAGGACAGGTACAAGGTGAGAGAAATTTGAGTTCTTCTGAACAGATGGAAATTCAAAGGATTAGTAATATACATATTTCAAAAGATGGGCGTGCTCAAGAAAATAACCCTATTGATCGTGCAAGTGACCACCATTTTGTGGGAAGAGATCAAGGAAGAGAACGCCAAGAGATGTCTGATATCAATGGTCCTGCCGTTTCGCAACATCATCCCAGTAACTGGGTACAAGAAGAAGATGAGGATGATGATAACGATGATGGAGATGATAGTGAATTGTGTGTTCAGTCAACTCCACCATACTGTGAAGAACACTAGAAAACAGCTCTAGACGATGCCATTGCGGATGCTCGGTCTATTGGTGGAAATGTAGTGCAACATCAACCTAGACGTGAGAAGATGAGGTCGAGGAGATGCCAACTCTCTCATTTAGCTGGTGGTATCTGTATCCTTGTCTTAATCATAGGGTCAATTTGGTCATAAATTGTTAACCTTTCAGCCTCCAGTCCCCTCTACTGTTCCAGTATTGTTTAAACAAAACCAGCTGTTGGTTTTGGGTGGTTGTATTTTCTTCTTTTGCATTAATTTCAGGTATTTTCTAATGTCTTCTTTTAGATATGATGGCCATTCCGTGAAAGCTGGAGCTTTTAAATCTAATCTTAGGTAGAAGGGCAAACGTTTTATTGAAGAGAAAAAAGCCTGGTGAGCTTTCTTCTAATTCTCACTCTTAAATTGCTCAATTAGTCATGTTTTAAAAAATGTTCGTGAGTATTTGAGTCAGCTTACGTGCACCTCGAATATTCTCATAAAATATATTGTTTGACC

Coding sequence (CDS)

ATGGAGTTTAGTCTGAGCGGAAACGCTCTCAAGACCTTCGCCCGCTCAGTCACTTGCCTTGCTCGGATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGCTTGCCTTTTACACTCTCAATGCATCACGGTCTGCCCATCAAGCTATAACATTTGAGCCTGGGTTCTTTGATGCTTATGTCATTTCTGGTGATCAAGTGCAGTGCAGTGTTCTTTTGAAGGCTGTTTGCTCTGTTCTTAGAACACCAATTGCTAGTGTAGACCATCTGAAAGTGAGGTTACCAGATCCTGATGCATTGAAAGTACAATGGAGTTTGGAATGCTTCAGCGGAATGAAGAAAACATACTGCATTTCTTGCAATGTTGAGCCAGACATACAACACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATAGATTACTCTCTAATTTCCAGTCATCCTTGCAGGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAAGTGAGATTGAAGGAAAGGCTGTTGAGCTTAGAAGTTATATAGACCCAACCAAAGACAATGATGCGCTGCTTCATACTCAACTTTGGATAGATCCTATGGAAGAGTTTGTTCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGCATTTCTTTCTTTTTGCGAGGGCTGTGAAGTTGACATCCATCTGTATTTTGAAAAGGCTGGGGAGCCAATTCTAATGGCACCAAAATTTGGTCTAGATGATGGATCCGGTTCAAACTTTGATGCTACACTTGTTCTTGCTACCATGCTAGTATCACAGCTCCATGCGGGTAGCCGATCACAGCCTCCACAGGAGGCTACTACTGGGCATGGTGAACCTGATCACAGGGCTGGATCCCAACTACAGCAGGATGGGTCCAGAGCTAATGTTTCTGGGCATCCATCTGATCATACCAGAATATGGTCTGAACTCTCAGGAAGTGCACCAAGAAGTGGTAATGGTGCTGAAGGACAGGTACAAGGTGAGAGAAATTTGAGTTCTTCTGAACAGATGGAAATTCAAAGGATTAGTAATATACATATTTCAAAAGATGGGCGTGCTCAAGAAAATAACCCTATTGATCGTGCAAGTGACCACCATTTTGTGGGAAGAGATCAAGGAAGAGAACGCCAAGAGATGTCTGATATCAATGGTCCTGCCGTTTCGCAACATCATCCCAGTAACTGGGTACAAGAAGAAGATGAGGATGATGATAACGATGATGGAGATGATAGTGAATTGTGTGTTCAGTCAACTCCACCATACTGTGAAGAACACTAG

Protein sequence

MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDAYVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEIEGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEATTGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSSSEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPSNWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH

Homology

[Close]

BLAST of Sed0024378 vs. NCBI nr
Match: XP_023537430.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537431.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537432.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 814.3 bits (2102), Expect = 5.2e-232
Identity = 413/452 (91.37%), Postives = 426/452 (94.25%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+QAITFEPGFFD 
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y ISG+QVQCSVLLKAVCSVLRT IASVDHL+VRLPD  ALK+QWSLECF+G+KKTYCIS
Sbjct: 61  YAISGNQVQCSVLLKAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGIKKTYCIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAA EI
Sbjct: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAAIEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCEVDIHL+FEKAGEPIL+APKFGLDDGSG+NFDATLVLATMLVSQLHAGSRSQPPQEAT
Sbjct: 241 GCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEAT 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           TG GE DHRAGSQ QQDG  ANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQG+ NLSS
Sbjct: 301 TGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSS 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
           SEQMEIQRISN+ ISK G AQ  N +DRA DH  VGRD GRE QE SDINGPAVSQHHPS
Sbjct: 361 SEQMEIQRISNVQISKAGCAQGYNLVDRARDHS-VGRDLGREHQERSDINGPAVSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           NWV EEDEDDDNDDGDD+ELCVQSTPPY EEH
Sbjct: 421 NWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Sed0024378 vs. NCBI nr
Match: KAG6586248.1 (Cell cycle checkpoint control protein RAD9A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 812.0 bits (2096), Expect = 2.6e-231
Identity = 411/452 (90.93%), Postives = 426/452 (94.25%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEF+LSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+QAITFEPGFFD 
Sbjct: 1   MEFNLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y ISG+QVQCSVLLKAVCSVLRT IASVDHL+VRLPD  ALK+QWSLECF+G+KKTYCIS
Sbjct: 61  YAISGNQVQCSVLLKAVCSVLRTSIASVDHLRVRLPDTFALKIQWSLECFNGIKKTYCIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAA EI
Sbjct: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAAIEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCEVDIHL+FEKAGEPIL+APKFGLDDGSG+NFDATLVLATMLVSQLHAGSRSQPPQEAT
Sbjct: 241 GCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEAT 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           TG GE DHRAGSQ QQDG  ANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQG+ NLSS
Sbjct: 301 TGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSS 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
           SEQMEIQRISN+ ISK G AQ  N +DRA DH  VGRD GRE QE SDINGPAVSQHHPS
Sbjct: 361 SEQMEIQRISNVQISKAGCAQGYNLVDRARDHS-VGRDLGREHQERSDINGPAVSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           NWV E+DEDDDNDDGDD+ELCVQSTPPY EEH
Sbjct: 421 NWVDEDDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Sed0024378 vs. NCBI nr
Match: XP_022937528.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937529.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937530.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937531.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937532.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937533.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata])

HSP 1 Score: 810.8 bits (2093), Expect = 5.8e-231
Identity = 410/452 (90.71%), Postives = 426/452 (94.25%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEF+LSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+QAITFEPGFFD 
Sbjct: 1   MEFNLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y ISG+QVQCSVLLKAVCSVLRT IASVDHL+V+LPD  ALK+QWSLECF+G+KKTYCIS
Sbjct: 61  YAISGNQVQCSVLLKAVCSVLRTSIASVDHLRVQLPDTYALKIQWSLECFNGIKKTYCIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAA EI
Sbjct: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAAIEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGV+ELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVRELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCEVDIHL+FEKAGEPIL+APKFGLDDGSG+NFDATLVLATMLVSQLHAGSRSQPPQEAT
Sbjct: 241 GCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEAT 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           TG GE DHRAGSQ QQDG  ANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQG+ NLSS
Sbjct: 301 TGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSS 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
           SEQMEIQRISN+ ISK G AQ  N +DRA DH  VGRD GRE QE SDINGPAVSQHHPS
Sbjct: 361 SEQMEIQRISNVQISKAGYAQGYNLVDRARDHS-VGRDLGREHQERSDINGPAVSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           NWV EEDEDDDNDDGDD+ELCVQSTPPY EEH
Sbjct: 421 NWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Sed0024378 vs. NCBI nr
Match: XP_022965728.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita maxima] >XP_022965729.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita maxima])

HSP 1 Score: 805.8 bits (2080), Expect = 1.9e-229
Identity = 409/452 (90.49%), Postives = 423/452 (93.58%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+QAITFEPGFFD 
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y ISG+QVQCSVLLKAVCSVLRT +ASVDHL+VRLPD  ALK+QWSLECF+G+KKTYCIS
Sbjct: 61  YAISGNQVQCSVLLKAVCSVLRTSMASVDHLRVRLPDTYALKIQWSLECFNGIKKTYCIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
            NVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAA EI
Sbjct: 121 SNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAAIEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCEVDIHL+FEKAGEPIL+APKFGLDDGSG+NFDATLVLATMLVSQLHAGSRSQPPQEAT
Sbjct: 241 GCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEAT 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           TG GE DHR GSQ QQDG  ANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQG+ NLSS
Sbjct: 301 TGQGESDHRTGSQAQQDGPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSS 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
           SEQMEIQRISN+ ISK G AQ  N +DRA DH  VG D GRE QE SDINGPAVSQHHPS
Sbjct: 361 SEQMEIQRISNVQISKAGCAQGYNLVDRARDHS-VGGDLGREHQERSDINGPAVSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           NWV EEDEDDDNDDGDD+ELCVQSTPPY EEH
Sbjct: 421 NWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Sed0024378 vs. NCBI nr
Match: XP_038890821.1 (cell cycle checkpoint control protein RAD9A [Benincasa hispida])

HSP 1 Score: 805.8 bits (2080), Expect = 1.9e-229
Identity = 409/453 (90.29%), Postives = 424/453 (93.60%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+QAITF+ GFFD 
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFQTGFFDD 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y ISG+QVQCSVLLKAVCSVLRTPIAS+DHLKV+LPDPDALKV+WSLECF+GMKKTYCIS
Sbjct: 61  YAISGNQVQCSVLLKAVCSVLRTPIASIDHLKVQLPDPDALKVRWSLECFNGMKKTYCIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CN+EPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEIT+IATEPTSLPSEAASEI
Sbjct: 121 CNIEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITIIATEPTSLPSEAASEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDP EEFVHYSHSGDPVDITFGVKELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPKEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCEVDIHLYFEKAGEPILMAPKFGLDDGS SNFDATLVLATML+SQLHAGS+SQPPQEA 
Sbjct: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSSSNFDATLVLATMLISQLHAGSQSQPPQEAA 300

Query: 301 TGHGEPDHRAGSQ--LQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNL 360
             HGE DHRAGSQ   +QDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQ ERNL
Sbjct: 301 NVHGESDHRAGSQAHAEQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQAERNL 360

Query: 361 SSSEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHH 420
           SSSEQMEIQRIS I ISK G AQEN+ + RASDH       GRERQE SDINGPAVSQHH
Sbjct: 361 SSSEQMEIQRISTIQISKAGCAQENDQVGRASDH-----SMGRERQERSDINGPAVSQHH 420

Query: 421 PSNWVQEEDEDDDNDDGDDSELCVQSTPPYCEE 452
           PSNWV EEDEDDDNDDGDD+ELCVQSTPPY EE
Sbjct: 421 PSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEE 448

[Close]

BLAST of Sed0024378 vs. ExPASy Swiss-Prot
Match: Q6WBX8 (Cell cycle checkpoint control protein RAD9B OS=Homo sapiens OX=9606 GN=RAD9B PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 3.2e-14
Identity = 106/428 (24.77%), Postives = 187/428 (43.69%), Query Frame = 0


Query: 5   LSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDAYVIS 64
           +SG+ +K F ++V  L+RI +E  +  S   LA   +N+SRSA+  + F P FF  Y  S
Sbjct: 6   MSGSQVKVFGKAVQALSRISDEFWLDPSKKGLALRCVNSSRSAYGCVLFSPVFFQHYQWS 65

Query: 65  G------------DQVQCSVLLKAVCSVLRTPIASVDHL-KVRL-PDPDALKVQWSLECF 124
                          ++C + +K++  + R   +   ++ K R+    D  KV       
Sbjct: 66  ALVKMSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRIFTRSDKCKVVIQFFYR 125

Query: 125 SGMKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPT 184
            G+K+T+ I C  E     +  D+    + L+++PR L   +  F SS +E+T +A  P 
Sbjct: 126 HGIKRTHNI-CFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFTSSQEEVT-LAVTPL 185

Query: 185 SLPSEAASEIEGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVK 244
           +               L+S  + + D    +H+++++   +EF  +   G   +ITF  K
Sbjct: 186 NFC-------------LKSSNEESMDLSNAVHSEMFVG-SDEF-DFFQIGMDTEITFCFK 245

Query: 245 ELKAFLSFCEGCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAG 304
           ELK  L+F E     I +YF+  G+P+ ++    +DD      +A  +LAT+   Q    
Sbjct: 246 ELKGILTFSEATHAPISIYFDFPGKPLALS----IDD---MLVEANFILATLADEQ---- 305

Query: 305 SRSQPPQEATTGHGEPDHRAGSQLQQDGSRANVSG---------------HPSDHTRIWS 364
           SR+  PQ           R  S L +  +  NV+G               +P +     S
Sbjct: 306 SRASSPQSLCLS----QKRKRSDLIEKKAGKNVTGQALECISKKAAPRRLYPKETLTNIS 365

Query: 365 ELSGSAPRSGNGAEGQVQ--GERNLSSSEQME----IQRISNIH---ISKDGRAQENNPI 392
            L      +    +G V    E ++S++E++     +++ S +    +S D +   N+P 
Sbjct: 366 ALENCGSPAMKRVDGDVSEVSESSVSNTEEVPGSLCLRKFSCMFFGAVSSDQQEHFNHPF 401

[Close]

BLAST of Sed0024378 vs. ExPASy Swiss-Prot
Match: P26306 (DNA repair protein rad9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rad9 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-11
Identity = 73/320 (22.81%), Postives = 131/320 (40.94%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEF++S   L+  AR  T L+RI + +  + + +Q+    LN+SRS    +T +  FFD 
Sbjct: 1   MEFTVSNVNLRDLARIFTNLSRIDDAVNWEINKNQIEITCLNSSRSGFSMVTLKKAFFDK 60

Query: 61  YVISGDQVQCSVLL----------KAVCSVLRTPI------------------------- 120
           Y+   D V  + L+          K + SV R  I                         
Sbjct: 61  YIFQPDSVLLTGLMTPTIRIRTQVKPILSVFRNKIFDFIPTVVTTNSKNGYGSESASRKD 120

Query: 121 ASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRP 180
             V+++++ +      ++ +   C  G+ KTY IS   +    H   D+    ++  +  
Sbjct: 121 VIVENVQISISTGSECRIIFKFLCKHGVIKTYKISYE-QTQTLHAVFDKSLSHNNFQINS 180

Query: 181 RDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEIEGKAVELRSYIDPTKDNDALLHTQL 240
           + L  L  +F    +E+T+   +   L +    E+      L+    PT+       T +
Sbjct: 181 KILKDLTEHFGQRTEELTIQPLQERVLLTSFTEEVVHNRDILK---QPTQ-------TTV 240

Query: 241 WIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLYFEKAGEPILMAPKFGL 286
            ID  +EF   +   + V +T  ++E +A +   E     I  Y+   G+PIL+      
Sbjct: 241 SIDG-KEFERVA-LNEGVSVTLSLREFRAAVILAEALGSSICAYYGVPGKPILLT----F 300

[Close]

BLAST of Sed0024378 vs. ExPASy TrEMBL
Match: A0A6J1FGA2 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443913 PE=3 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 2.8e-231
Identity = 410/452 (90.71%), Postives = 426/452 (94.25%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEF+LSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+QAITFEPGFFD 
Sbjct: 1   MEFNLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y ISG+QVQCSVLLKAVCSVLRT IASVDHL+V+LPD  ALK+QWSLECF+G+KKTYCIS
Sbjct: 61  YAISGNQVQCSVLLKAVCSVLRTSIASVDHLRVQLPDTYALKIQWSLECFNGIKKTYCIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAA EI
Sbjct: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAAIEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGV+ELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVRELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCEVDIHL+FEKAGEPIL+APKFGLDDGSG+NFDATLVLATMLVSQLHAGSRSQPPQEAT
Sbjct: 241 GCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEAT 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           TG GE DHRAGSQ QQDG  ANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQG+ NLSS
Sbjct: 301 TGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSS 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
           SEQMEIQRISN+ ISK G AQ  N +DRA DH  VGRD GRE QE SDINGPAVSQHHPS
Sbjct: 361 SEQMEIQRISNVQISKAGYAQGYNLVDRARDHS-VGRDLGREHQERSDINGPAVSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           NWV EEDEDDDNDDGDD+ELCVQSTPPY EEH
Sbjct: 421 NWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Sed0024378 vs. ExPASy TrEMBL
Match: A0A6J1HRT1 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465538 PE=3 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 9.0e-230
Identity = 409/452 (90.49%), Postives = 423/452 (93.58%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+QAITFEPGFFD 
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y ISG+QVQCSVLLKAVCSVLRT +ASVDHL+VRLPD  ALK+QWSLECF+G+KKTYCIS
Sbjct: 61  YAISGNQVQCSVLLKAVCSVLRTSMASVDHLRVRLPDTYALKIQWSLECFNGIKKTYCIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
            NVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAA EI
Sbjct: 121 SNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAAIEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCEVDIHL+FEKAGEPIL+APKFGLDDGSG+NFDATLVLATMLVSQLHAGSRSQPPQEAT
Sbjct: 241 GCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEAT 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           TG GE DHR GSQ QQDG  ANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQG+ NLSS
Sbjct: 301 TGQGESDHRTGSQAQQDGPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSS 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
           SEQMEIQRISN+ ISK G AQ  N +DRA DH  VG D GRE QE SDINGPAVSQHHPS
Sbjct: 361 SEQMEIQRISNVQISKAGCAQGYNLVDRARDHS-VGGDLGREHQERSDINGPAVSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           NWV EEDEDDDNDDGDD+ELCVQSTPPY EEH
Sbjct: 421 NWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Sed0024378 vs. ExPASy TrEMBL
Match: A0A6J1DBU1 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018877 PE=3 SV=1)

HSP 1 Score: 805.4 bits (2079), Expect = 1.2e-229
Identity = 406/451 (90.02%), Postives = 424/451 (94.01%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+QAITFEPGFFDA
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDA 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           YV+SG+QVQCSVLLKAVCSVLRTPIAS+DHL+V+LPDPD+LKVQWSL+CF+GM KTYCIS
Sbjct: 61  YVVSGNQVQCSVLLKAVCSVLRTPIASIDHLRVQLPDPDSLKVQWSLKCFNGMNKTYCIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEIT+IATEPTSLPSEAASEI
Sbjct: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITIIATEPTSLPSEAASEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
            CEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFD TLVLATMLVSQLH GSR+Q PQEA 
Sbjct: 241 CCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDVTLVLATMLVSQLHVGSRAQLPQEAA 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           T HGE DHR  SQ QQDGSRANVSGHPSDHTRIWSELSGSAPRSGN AEGQVQGERNLSS
Sbjct: 301 TEHGESDHRTASQPQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNAAEGQVQGERNLSS 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
            EQMEIQRIS + IS  G AQ NN +DR SD+  +G+D+GRERQE SDINGPAVSQHHPS
Sbjct: 361 CEQMEIQRISTMQISNAGCAQANNLVDRTSDNP-MGKDRGRERQERSDINGPAVSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEE 452
           NWV EEDEDDD DDGDD+ELCVQSTPPY EE
Sbjct: 421 NWVDEEDEDDDKDDGDDNELCVQSTPPYYEE 450

[Close]

BLAST of Sed0024378 vs. ExPASy TrEMBL
Match: A0A1S3BY80 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494672 PE=3 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 2.3e-225
Identity = 406/457 (88.84%), Postives = 422/457 (92.34%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSA+ AITFE GFFD 
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYLAITFETGFFDN 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y ISG+QVQCSVLLKAVCSVLRTPIAS+DHLKV+LPDPDALKV+WSLECF+GMKKTY IS
Sbjct: 61  YAISGNQVQCSVLLKAVCSVLRTPIASIDHLKVQLPDPDALKVRWSLECFNGMKKTYFIS 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CN+EPDIQHLSLDRRQFPS+LVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI
Sbjct: 121 CNIEPDIQHLSLDRRQFPSELVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
           EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE
Sbjct: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCEVDIHLYFEKAGEPILMAPKFGLDDGS SNFDATLVLATML+SQLH G RSQPPQEA 
Sbjct: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSSSNFDATLVLATMLISQLHVGDRSQPPQEAA 300

Query: 301 TGHGEPDHRAGS------QLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQG 360
           + HGE D RAGS      Q QQD SR NVSGHPSDHTRIWS+LSGSAPRSGNGAEGQVQG
Sbjct: 301 SVHGESDRRAGSQAQAQAQAQQDASRPNVSGHPSDHTRIWSDLSGSAPRSGNGAEGQVQG 360

Query: 361 ERNLSSSEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAV 420
           ERNLSSSEQMEIQRIS I ISK G AQEN+ + RASDH  +GRDQGRERQE SDINGP V
Sbjct: 361 ERNLSSSEQMEIQRISTIQISKAGCAQENDRVGRASDHS-MGRDQGRERQEKSDINGPPV 420

Query: 421 SQHHPSNWVQEEDEDDDNDDGDDSELCVQSTPPYCEE 452
           SQHHPSNWV EED+DD  DDGDD+ELCVQSTPPY EE
Sbjct: 421 SQHHPSNWVDEEDDDD--DDGDDNELCVQSTPPYYEE 454

[Close]

BLAST of Sed0024378 vs. ExPASy TrEMBL
Match: A0A6J1FBG3 (cell cycle checkpoint control protein RAD9A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443913 PE=3 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.3e-212
Identity = 377/418 (90.19%), Postives = 392/418 (93.78%), Query Frame = 0


Query: 35  QLAFYTLNASRSAHQAITFEPGFFDAYVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVR 94
           QLAFYTLNASRSA+QAITFEPGFFD Y ISG+QVQCSVLLKAVCSVLRT IASVDHL+V+
Sbjct: 19  QLAFYTLNASRSAYQAITFEPGFFDTYAISGNQVQCSVLLKAVCSVLRTSIASVDHLRVQ 78

Query: 95  LPDPDALKVQWSLECFSGMKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSN 154
           LPD  ALK+QWSLECF+G+KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSN
Sbjct: 79  LPDTYALKIQWSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSN 138

Query: 155 FQSSLQEITVIATEPTSLPSEAASEIEGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFV 214
           FQSSLQEITVIATEPTSLPSEAA EIEGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFV
Sbjct: 139 FQSSLQEITVIATEPTSLPSEAAIEIEGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFV 198

Query: 215 HYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFD 274
           HYSHSGDPVDITFGV+ELKAFLSFCEGCEVDIHL+FEKAGEPIL+APKFGLDDGSG+NFD
Sbjct: 199 HYSHSGDPVDITFGVRELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFD 258

Query: 275 ATLVLATMLVSQLHAGSRSQPPQEATTGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIW 334
           ATLVLATMLVSQLHAGSRSQPPQEATTG GE DHRAGSQ QQDG  ANVSGHPSDHTRIW
Sbjct: 259 ATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIW 318

Query: 335 SELSGSAPRSGNGAEGQVQGERNLSSSEQMEIQRISNIHISKDGRAQENNPIDRASDHHF 394
           SELSGSAPRSGNGAEGQVQG+ NLSSSEQMEIQRISN+ ISK G AQ  N +DRA DH  
Sbjct: 319 SELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGYAQGYNLVDRARDHS- 378

Query: 395 VGRDQGRERQEMSDINGPAVSQHHPSNWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           VGRD GRE QE SDINGPAVSQHHPSNWV EEDEDDDNDDGDD+ELCVQSTPPY EEH
Sbjct: 379 VGRDLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 435

[Close]

BLAST of Sed0024378 vs. TAIR 10
Match: AT3G05480.1 (cell cycle checkpoint control protein family )

HSP 1 Score: 545.0 bits (1403), Expect = 5.5e-155
Identity = 278/452 (61.50%), Postives = 343/452 (75.88%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           ME S+SGNALKT +RS+ CLAR+GNELV+QASP+QLA +TLNASRSA+Q ITF+  FFD 
Sbjct: 1   MELSISGNALKTLSRSIICLARVGNELVVQASPTQLALHTLNASRSAYQCITFQSSFFDV 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y +SG Q   SVLLKAVCSVLRTP+AS+DH+ V+LPD DA KV+W+L+C+SGMKKTY I+
Sbjct: 61  YTVSGPQAHFSVLLKAVCSVLRTPLASIDHMSVQLPDHDASKVKWTLQCYSGMKKTYWIT 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CNVEPDIQHLSLDR +FPS LV+ PR+L++LL NFQSSLQEIT+IAT+ TS PS+AASEI
Sbjct: 121 CNVEPDIQHLSLDRGRFPSTLVMHPRNLSKLLGNFQSSLQEITIIATDQTSFPSDAASEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
            GKAVE RSY+DPTKD D+LLHTQLWIDP EEF+ Y+H+GDPVDITF +KELKAFL+FCE
Sbjct: 181 GGKAVEFRSYVDPTKDGDSLLHTQLWIDPSEEFLQYTHAGDPVDITFSLKELKAFLAFCE 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
           GCE DIHL+FEKAGEPILMAPKFGL DGS S+FDATLVLATMLVSQL  G  ++PP+ A 
Sbjct: 241 GCEADIHLFFEKAGEPILMAPKFGLGDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAAN 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           +  G    + GS+  Q+ SR N S HPSDHTR+WSELSG+A +S NG E + Q +     
Sbjct: 301 STGGHAAEQVGSR-PQERSRQNASEHPSDHTRVWSELSGTATKSVNGTEDRPQAQ----G 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
              ++I RI N+ ISK G   +  P            D     +    +   + SQHHPS
Sbjct: 361 QPDLDIHRIRNMEISKGGPVGDTAPAAPPKSQRPTQIDHAEGSRVR--VQNQSFSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           NWV   +E++D+D+G      V++TPP+ E++
Sbjct: 421 NWVDANEEEEDDDEG------VEATPPHNEDY 439

[Close]

BLAST of Sed0024378 vs. TAIR 10
Match: AT3G05480.3 (cell cycle checkpoint control protein family )

HSP 1 Score: 531.9 bits (1369), Expect = 4.8e-151
Identity = 277/469 (59.06%), Postives = 342/469 (72.92%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           ME S+SGNALKT +RS+ CLAR+GNELV+QASP+QLA +TLNASRSA+Q ITF+  FFD 
Sbjct: 1   MELSISGNALKTLSRSIICLARVGNELVVQASPTQLALHTLNASRSAYQCITFQSSFFDV 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFS--------- 120
           Y +SG Q   SVLLKAVCSVLRTP+AS+DH+ V+LPD DA KV+W+L+C+S         
Sbjct: 61  YTVSGPQAHFSVLLKAVCSVLRTPLASIDHMSVQLPDHDASKVKWTLQCYSAVLCKNLDV 120

Query: 121 --------GMKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEIT 180
                    MKKTY I+CNVEPDIQHLSLDR +FPS LV+ PR+L++LL NFQSSLQEIT
Sbjct: 121 ACFRPVHNSMKKTYWITCNVEPDIQHLSLDRGRFPSTLVMHPRNLSKLLGNFQSSLQEIT 180

Query: 181 VIATEPTSLPSEAASEIEGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPV 240
           +IAT+ TS PS+AASEI GKAVE RSY+DPTKD D+LLHTQLWIDP EEF+ Y+H+GDPV
Sbjct: 181 IIATDQTSFPSDAASEIGGKAVEFRSYVDPTKDGDSLLHTQLWIDPSEEFLQYTHAGDPV 240

Query: 241 DITFGVKELKAFLSFCEGCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATML 300
           DITF +KELKAFL+FCEGCE DIHL+FEKAGEPILMAPKFGL DGS S+FDATLVLATML
Sbjct: 241 DITFSLKELKAFLAFCEGCEADIHLFFEKAGEPILMAPKFGLGDGSSSSFDATLVLATML 300

Query: 301 VSQLHAGSRSQPPQEATTGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPR 360
           VSQL  G  ++PP+ A +  G    + GS+  Q+ SR N S HPSDHTR+WSELSG+A +
Sbjct: 301 VSQLQEGIPAEPPEAANSTGGHAAEQVGSR-PQERSRQNASEHPSDHTRVWSELSGTATK 360

Query: 361 SGNGAEGQVQGERNLSSSEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRER 420
           S NG E + Q +        ++I RI N+ ISK G   +  P            D     
Sbjct: 361 SVNGTEDRPQAQ----GQPDLDIHRIRNMEISKGGPVGDTAPAAPPKSQRPTQIDHAEGS 420

Query: 421 QEMSDINGPAVSQHHPSNWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           +    +   + SQHHPSNWV   +E++D+D+G      V++TPP+ E++
Sbjct: 421 RVR--VQNQSFSQHHPSNWVDANEEEEDDDEG------VEATPPHNEDY 456

[Close]

BLAST of Sed0024378 vs. TAIR 10
Match: AT3G05480.2 (cell cycle checkpoint control protein family )

HSP 1 Score: 466.1 bits (1198), Expect = 3.3e-131
Identity = 251/452 (55.53%), Postives = 317/452 (70.13%), Query Frame = 0


Query: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAHQAITFEPGFFDA 60
           ME S+SGNALKT +RS+ CLAR+GNELV+QASP+QLA +TLNASRSA+Q ITF+  FFD 
Sbjct: 1   MELSISGNALKTLSRSIICLARVGNELVVQASPTQLALHTLNASRSAYQCITFQSSFFDV 60

Query: 61  YVISGDQVQCSVLLKAVCSVLRTPIASVDHLKVRLPDPDALKVQWSLECFSGMKKTYCIS 120
           Y +SG Q   SVLLKAVCSVLRTP+AS+DH+ V+LPD DA KV+W+L+C+SGMKKTY I+
Sbjct: 61  YTVSGPQAHFSVLLKAVCSVLRTPLASIDHMSVQLPDHDASKVKWTLQCYSGMKKTYWIT 120

Query: 121 CNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLPSEAASEI 180
           CNVEPDIQHLSLDR +FPS LV+ PR+L++LL NFQSSLQEIT+IAT+ TS PS+AASEI
Sbjct: 121 CNVEPDIQHLSLDRGRFPSTLVMHPRNLSKLLGNFQSSLQEITIIATDQTSFPSDAASEI 180

Query: 181 EGKAVELRSYIDPTKDNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCE 240
            GKAVE RSY+DPTKD D+LLHTQLWIDP EEF+ Y+H+   + +T              
Sbjct: 181 GGKAVEFRSYVDPTKDGDSLLHTQLWIDPSEEFLQYTHAVTILSVT-------------- 240

Query: 241 GCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDATLVLATMLVSQLHAGSRSQPPQEAT 300
            C    ++YF     PILMAPKFGL DGS S+FDATLVLATMLVSQL  G  ++PP+ A 
Sbjct: 241 ECH---NMYF--VARPILMAPKFGLGDGSSSSFDATLVLATMLVSQLQEGIPAEPPEAAN 300

Query: 301 TGHGEPDHRAGSQLQQDGSRANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGERNLSS 360
           +  G    + GS+  Q+ SR N S HPSDHTR+WSELSG+A +S NG E + Q +     
Sbjct: 301 STGGHAAEQVGSR-PQERSRQNASEHPSDHTRVWSELSGTATKSVNGTEDRPQAQ----G 360

Query: 361 SEQMEIQRISNIHISKDGRAQENNPIDRASDHHFVGRDQGRERQEMSDINGPAVSQHHPS 420
              ++I RI N+ ISK G   +  P            D     +    +   + SQHHPS
Sbjct: 361 QPDLDIHRIRNMEISKGGPVGDTAPAAPPKSQRPTQIDHAEGSRVR--VQNQSFSQHHPS 420

Query: 421 NWVQEEDEDDDNDDGDDSELCVQSTPPYCEEH 453
           NWV   +E++D+D+G      V++TPP+ E++
Sbjct: 421 NWVDANEEEEDDDEG------VEATPPHNEDY 420

The following BLAST results are available for this feature:

BLAST of Sed0024378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537430.1	5.2e-232	91.37	cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pe...	[more]
KAG6586248.1	2.6e-231	90.93	Cell cycle checkpoint control protein RAD9A, partial [Cucurbita argyrosperma sub...	[more]
XP_022937528.1	5.8e-231	90.71	cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_022965728.1	1.9e-229	90.49	cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita maxima] >XP_02...	[more]
XP_038890821.1	1.9e-229	90.29	cell cycle checkpoint control protein RAD9A [Benincasa hispida]	[more]

BLAST of Sed0024378 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6WBX8	3.2e-14	24.77	Cell cycle checkpoint control protein RAD9B OS=Homo sapiens OX=9606 GN=RAD9B PE=...	[more]
P26306	2.5e-11	22.81	DNA repair protein rad9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) O...	[more]

BLAST of Sed0024378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGA2	2.8e-231	90.71	cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1HRT1	9.0e-230	90.49	cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1DBU1	1.2e-229	90.02	cell cycle checkpoint control protein RAD9A isoform X1 OS=Momordica charantia OX...	[more]
A0A1S3BY80	2.3e-225	88.84	cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1FBG3	1.3e-212	90.19	cell cycle checkpoint control protein RAD9A isoform X2 OS=Cucurbita moschata OX=...	[more]

BLAST of Sed0024378 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05480.1	5.5e-155	61.50	cell cycle checkpoint control protein family	[more]
AT3G05480.3	4.8e-151	59.06	cell cycle checkpoint control protein family	[more]
AT3G05480.2	3.3e-131	55.53	cell cycle checkpoint control protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007268	Rad9/Ddc1	PFAM	PF04139	Rad9	coord: 13..282 e-value: 1.3E-73 score: 247.6
IPR007268	Rad9/Ddc1	PANTHER	PTHR15237	DNA REPAIR PROTEIN RAD9	coord: 1..448
IPR026584	Rad9	PIRSF	PIRSF009303	RAD9	coord: 1..450 e-value: 3.8E-92 score: 307.4
None	No IPR available	GENE3D	3.70.10.10		coord: 2..282 e-value: 3.5E-69 score: 235.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..378
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..405
None	No IPR available	PANTHER	PTHR15237:SF0	CELL CYCLE CHECKPOINT CONTROL PROTEIN	coord: 1..448
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 6..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024378.1	Sed0024378.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071479	cellular response to ionizing radiation
biological_process	GO:0006281	DNA repair
biological_process	GO:0000076	DNA replication checkpoint signaling
biological_process	GO:0031573	mitotic intra-S DNA damage checkpoint signaling
biological_process	GO:0000077	DNA damage checkpoint signaling
cellular_component	GO:0030896	checkpoint clamp complex