Sed0024332 (gene) Chayote v1

Overview
NameSed0024332
Typegene
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
LocationLG11: 5175021 .. 5185479 (+)
RNA-Seq ExpressionSed0024332
SyntenySed0024332
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAGTTCCTAAGATTGAAGGTGAATATTGATATTAGGCAACCATTAAGGAGAGCTATAAAAATTAAGAGTGGTACCATGGCTGAGGAGAAATGGGTTAGAATATCCTATGAGAAGCTTCCTGAATTCTGTTCAGGCTGTGGGAGAATTGGTCACTCAGTTAAAAAATGCAGCTTCGTGGTGATTGGGGAAGGAGTCCCGTTTCCTTTTGGTGAGGAGCTCCGTGAACCTCTGAGCTTCTTCAGAGGGGATCGTGGTCAGGCGGTTGACCATGAGATGGGAGGTCGAGGGAGAGGAAGAGGAAGGGGCTATGGTTGGAGGCAGACAACACAAAATCTTCGAGATGAAATGGGGGGGAACGATATTCATCACAGACGTGAGGAGTGGGTTCGTCAGCCGGAGCCCTTGCCGGAGAAGGTTAAAGGGTGTAATAACGGCTCACCGGCGACGAATTCCGTGGGGAAGGAAGCTTCGGCGTCCTGTCAAAATCAAAGTCAGAAGGGGGAGGTGGAGGTGCAGAGAAGAGAGCCAGCCAGGGCTTCAGGTCATACGAGGGATTTATTGGAATTGGAAATATTGCAGAAAGTTATCGCTGAGTCGGCTAAAGAAGCAGGGAGTGGGTCTAATGGGCTTCAACGAGTTGAGGATAAGGTGGGTAATGGTCAGAAGGGGGAAAATGGGGCAAAAATCGTTAGTGAGCCAATTGTAATGGATATTTCAACAGGGATGGAGAATTTTAAAGAGGGTGTTGGGCCAGGTAGTTTTAAAGAAGATTTGGGAGATGGCCATCGTAGTAGATGTAAGACAAGTATTGATAAAAAGGGAAAGGGGATTTGTATAGATGCTGAGACATATGGGTTCGAGGAGCAGACGACGCTAAAAAAGTTTGAGGTTATAGCGGTTAAGGAATCGAATGGGAATGTTAAGGTCGATAATAAAGAAATCTCTAAAAGGGAAGTGGAAGTTGAGCCCGTCATTAAGGATCAGCCGCTATCTTTAGTGGCGGGTCATGGGACGGAAGTTTTGAGAACGAAGACGGGTGGGGGGAAATGGAAGCGTAGAGCAAGGCTTGGAGGTAGTGAAGATTGCTCCCAGAATGAGGAGGGGAGAGCTGGCTTACCAAGGTTGTGTGTGATAAAACGCAATACGGAGAATATAGATAGGGAGGGTGATGAAAAGAAAGCTCGAATGAACTACATTGATAATATCAATGGGATATCGGCAGAGACTGTGGAACAGTCTCGTCGGACGCAATGAAAACCTTATGCTGGAATGCCCGGGGGTTGGGAAATCCTCGGGCCGTCGGGGCTCTTCGACATGAGGTGCTTCGTACTAGGCCGGATATTGTGTTTGTTTCGGAAACCAAGTGTGGGAAAGATGTTGTGGTTAATTTTAAGTGGTCGTTTGAGTTTGATTGCTGTTTTTGTGTTCCGAGTAAGGGAAGAAGCGGTGGTCTTTTGTTATTTTGGAACTCGTCTCTGGATGTCAGGATCTCTTCGTTCTCCAAAGGTCATATTGATGTCTCTATCAAGGACCAATGAGAATGGTGGAGATTCACAGGCTTCTATGGGAATCCCGTTCAGTCCAAGCGAAGAGAGTCTTGGGAATTGCTTCGGAGACTTTGTCATTGTTTCAATCTCCCGTGGATTATTGGAGGTGATTTTAATGAGATTGTGCATGAGGAGGAACAGATGTTTGGTTCAACAAGAAGTCAGGTGGGTATGGAGGATTTTCGCCAGGTGATTGATGAGTGCTCGCTTATCGATATTGGCTTCACGGGAGATCCTTTTACGTGGATTAAGCGGAAAGATAGTAATACGGCTACACGCGTTCGTCTTTACAGGTATTTTGCTAATCCTCTTTTCATTGCTAAATCTTGTAGAATTCGGATTGAGCACTTAAACTTTCACTCTTCGGATCATAGGCCAATTCTTTCTGAGTTCCGTTGGGTTAGTTCGGGGGATGTAATGTTTAGGAAAGCTCGTTCAATAAAGTTTGAGGATGGTTGGGTTAAGTTTGAGGAGTTCAAAAAATTAATTGAAGATAATTGGGTGGTGTCTAATGCTAGAGGGTCTAGTGCTATTAAGCTTAATAGTTGTGTTAATAGGTGCCTGAAAGAGATGGCCAGCTGGAATAAGAACAGATTAAACGGTTCTTTGAAAAAGGCTATTTCGGATAAAGAGTTGGAGATTGTTCAGCTGAATGAATCGGGAGAAGGTTATCGGTCTTTCTCGATTCAGAAAGCTGAGGTTGAGCTTGAAAATTTGTTAGAGGAGGAAGAAATCTTTTGGAAACAAAGGTCGAGGGAGGATTGGCTTAAATGGGGGGATAGGAATACCAAATGGTTTCACTTGAGAGCTTCCCAACTCAAGAAAAGAAATAGAATTGAAAGTCTTTGTGATGCCGAGGGTAGATGGTGGTCTAAGGAGACGGATATTGCAAGGGGTGCCATAAATTATTTTGAAAATATTTTTAAGGCCCAAGATAGCTCCTCTATAGCGATGGAAAGTTTTTTGAAGGGTGTTCAGAGAAAGATTAATGAGGTGGAGTCTAAGGAGTTGGATAGGAGATTCACTAGGTCGGAGGTGGAATTCGCGTTAAAGGGTATGAATCCTTCTAAGGCGCCTGGGCCGGATGGAACTAATGCCTTATTTTTTCGAAAGTATTGGGATATAGTTGGGGATGAGGTGGTGAATTTTTGTCTTGGGGTTTTGAATGAGGGTATGGAGTTAGGGCCGATTAATAGTACTTTTATTGTTCTAATCCCTAAGTTGCAGGTTTCTTGTAAAATGGGGGACTTTCGGCCTATTAGCCTGTGTAATACAATCTATAAAATTATTGCTAAAGCTATGGCTAATAGGCTGAAAACAATTCTGAATAAAATCATTTCTCCAAATCAAGCGGCTTTCGTTCCAGGTAGACTTATTACCGATAATGTTGTTATTGGTTTTGAATGTATTCATGCTATTCAGAAAAGAAAATCAGGTAAAAAAGGTTGGGCGGCCTTAAAGCTGGACATGAGCAAAGCTTATGATAGAGTGGAGTGGAATTTTTTGTTTGGAATGATGAAAAAGCTGGGTTTTTCCCAGGCTTGGATTAAGAAGGTTAAAATGTGCATCTCGTCGGTTAGGTATGCGGTTCTAATCAACGGCTCTCCTTATGGGGAGATTATTCCGAAACGTGGTTTGAGGTAGGGGGACCCTCTATCCCCTTACCTATTTATCATTTGTGCGGAAGGCCTTTCCTCTTTGCTTATCAGGGAAGAGATTTTAAACCCCTCTCTTTGTTTCAAAATTAATAATCATTGCCCTCCAATATCGCATTTATTCTTTGCTGATGACAGTTTGTTATTTTTCAGGGCGGAAGAGGTGGAGTGTATGAAAATGAAAGATCTTTTAAATTGTTATAAGGATGCGTCGGGCCAATTGGTTAATTTTGATAAGTCTGCTATGCTTTTTAGTGGGAATGTTTGTGGGAGGGAGAGAGAGAGATTGAGCAAGATTCTTGGGGTGAAAGTGAATGATAATTTAGGTGTCCATCTTGGGATGCCGTCGCAGAATTGCAAGAATAAGAAAGTTTTATTCCAGTCTATTAAATGGAGATTGGAGAAGTGTCTCCACTCTTGGAAAGGGAGGATCCTCTCTAAAGGTGGAAAAGAGGTGCTGATTAAGGCGGTTGGTCAAGCTATTCCTACCTATGTTATGAGTTGCTTTAGGCTTTCGAAATCTTTTAATGAGGATTTGGAGAACCTTTGTGCCAGATTCTGGTGGGGGGAGGATCCTTATGGAAAAAAAAGAATGCACTGGAAGAGTTGGAGGAACCTGGGGAGGAGTAAAGATATGGGTGAGTTGGGGTTTAGGGATCTTAACTTGTTTAATCAAGCTTTGCTCGCTAAACATAGTTGGAGGATTCTTAGGAATCCTAATAGTCTGTTAACTAGGATTCTAAGAGGTAAATATTTTGTGAATGGTGATTATTTGAATGCGGCTTTGGGCAGAAACCCTTCTTTAGCCTGGAGAAGTATTCTTTGGGGTAGGGATCTCTTTCAGAAGGGGTATAAATGGAAAGTGGGAAGTGGTAGAAGCATTATCATTGGGAATGATCCATGGTTGAGCAGGGAAGGGAATCCGTTTATTCAAGGGGTGAAAAGTGGGTGGCAGGATAACTATGTGGCGGATTTAATCAGGAACGGTAACTGTTGGAATAGTGAGCTGATTAATAATATTTGTTGTCCTGCTGACGCAGAGGTGATTCTGAATATCCCGCTGAGCTCCTCTGGGACTTCTGATGAAATCATTTGGAACAATAATTCGAGGGGCATTTTTTCGGTGAAAAGTGCGTACCATTTAGCTTTAAACTCTGCGAACCCGAATATGGGCTCTGTTTCTGATTATGAGGTGGGGTCCAAGGTGTGGAACTGCTTCTGGAAGGTTAATATGTCACCTAAAATTAGGATGGGCGCGTGGGCTGTGATTTCAAATGCCATTCCTTCTAAGTGCAATATTGTTAGGAGAGGGATAAGCTCGGATGTGGTTTGTATCCTGTGTGGGAGGAATGACGAATCTAATATACATATCCTTAAATGTTGTAAGATGGCTATTCGCATCTGGAAATTTTTCTTTCCTGGTTTTAATGATTTTGAGTTTTATTTCAGGAATGTGGAGAATGGTATTGATTTCTGGGACGAAATTGCTCGCAAAATTCCTAAGGAGGAGCTTTTTAAGGCCATCATTATTATTTGGGGTTTATGGAACTTTAGGAATTTAGTCGTTCACGATAAAGTTAAACTAGAGTTCCAAAATCTCTGTGATTTAATTATCAAGACTATTAATTCTCATCTGATAACTTTTGCAGGTGGCACTAGGATTGAGAGGAATAATAGGAGGCGTAGTGAGGGCCGGTGGAAAGCCCCCCCTCGTGGATGCTGGAAACTAAATGTGGATGCGTCATTATGCCATGATACTGGTGGAATCGGGTGGGTGGTTCGGGATTGGATGGGAAGACCTAAGCTAATAGGTTCGAGTTCGGGTTTCAAAAATCTTTCTATCAAGGCTTTAGAGGGGATGGCTCTGAGAGAAGGTCTGAGGCATATTTTGGAGGTCGATTTTCAGTGGAGGCCCCCTATCATGGTTGAGCTAGATGCTTTAGAGGTGTTAAAAGCTATTAGGGGGGACCTTTATGATCTGTCTGAGTTTAGCAATATTGTTGTTGACATTAAAGAGTTGATCTCTTCTATAGGTATTGTGAGTATTATGCATTGTAGTAGGTTCTGTAATAGTGTGGCCGATGTGTTGGCCAAACAAACTAATTCAATGCGTCTTAGTAGGATTGGTAGCTCTTCTTCTGTGGAGGACATGGTCGAATTTTGGAGGGGGAATCTCCCCCCTACTGTTGCCTCTGCTATGGAGGTTGATTGTATGATGTTGGTGCTTTGTTCTTAATGAATGGTTCTTTTTTCAAAAAAAAATAAAATATGAGAGGATGATAGAAACTTTAGACCACATAAGAATGAATAGATGTTTTAACTGCCTAAAGTATGTTCTTATGTTATCAATGTTTCAAATATTTATTTTAAACTTTAGACAATATAAAATTTTTTAACATATATTCTTTAATTCAACAATATTTGACATTTGAACTTGTAACCAACTTGTTATTATATGATACATTATGTCATTTGAATATAAATTTTTCTAACATTTAAAAATAAATTTATAATTATACGAAAATTTATATTTTGTAAACAAATATTATTTTTATTTTTATGTTCTTAAGATATAATAAAAAAATGACTAAGTATTGAAATTTTTTCTTTGCTCAAAACTTAGAGAAGTAATTGTTTTATACTTTTTTGTCCATTTAAATAATGCTTAGAATCTTATTATTATTATCATAAGTTTTTTTTACGGAACATTATCATACTGTTAAATACATTTTATTTCACACTTTTTTGTTAAATAAATAATGACATTCATTTACTTTTCTTTTTTTTTCTTTTTTTTTTTACGAAAACAATTTTTTTAAATACTTTACAAAAACAATTGTAGAGATTGAAAACACACAACATAAATTGTTTGAATTTTTTAGTTTTTTTCTTATAATAATGTTAGTAATATATATTGCTTACATTTTTTTTTAAAATAATATTGTTTACATTTTTTTAATCTTTCAAGTCTTTATTTTTATATATATATAATTATCATTTAGTTATTATTGTTACTTGTAATGATAAATTTATTCTTATAAGATTATAAATGAATTAAATTAAACATGAAAAAAATGCTAATCAAAATCGAGTTTTGTGATTCACTACCAAATTGAAACAACATTAGATAAATATTGACAATATATAGTTTAATAAAAGCACGGTTACACACAGACACACACATATATATATCATACTACCCTAAAGTATAGTTTGAGGGAAAAATTATTTTTGGACAATTTTACCCTTTAAGCCAACCCTAAATTACAAACATGCCATAATTTTCTATTAAAATATTAAAAAATGCAAAGATATTTACAATATTATTTAAATATTTAGATTTTTATCATGTTTATAACGTATAAGATAATATATTTCTCATAAATTAAGTTATACGTAGAAGATAATATATTTTTAGCAAATCTCATAAATTAAGTTAGAAGATAAGAGAATCCATGTAATCTTTATTTTTATCTTTACTACTTAAAATGTACTTATTATTAATAATTAAAATTTAGGGGAAAATCATTTTTGGACAATTTTACCCTTTAAGCCAACCCTAAATTACAAACATGCCATAATTTTCTATTAAAATATTAAAAAAATGCAAAGATATTTACAATATTATTTAAATATTTAGATTTTCATCATGTTTATAACGTAGAAGATAATATATTTGTCATAAATTAAGTTATACGTAGAAGATAATATATTTTTAGCAAATCTCATAAATTAAGTTAGAAGATAAGAGAATCCATGTAATCTTTATTTTTATCTTTACTACTTAAAATGTACTTTTTATTAATAATTAAAATTTAGTATCTTCAAACTAAATAATTATAAAATCAAATGAAGATATTGATTTTTTTTTTTTCAAATTTAAAGAAGATCTTGGGTTCCAAATTTTTTTATAAATACCACAAATTTATTGTTCTTCAAAATTCAAATTACTAATAATTCTTTTGATGTTGTACAAATTACAAATTTTGTTCAGGTTGGGAGTCTTAACATTGGTACAGTGAGTTGTGTTCGTGGGAGCCGTTGCGTCGAAGGTAAAAAACAATTTTTTCAATGTGTATTTAATTCGCTGTACATAACATTTTCTTCTTCTTCATTTATTTTTATTTTTATTTTTATTATGTTTTCTTTGTATAATTCTATTTATTTTATGCTTCAACTTTAATTTATAATTTTCTTTTAAATTTATGGAGTATTTAAAATTTTGAAGAAGTGTTTATCACATTCTTCCATTAACGAAAGGTAATTTTTTTTTATAATTATTATTTTTTCATATTATTATTATAATTTGTTATTATAATAGATATGACTTAACATGTAATTTGTTGCTTATGATATGATACTTGATGTCATTGAAGTACTACTCATATCTTGACATACGAAACTACTTAAATTTTATCAATGTTACTAATTATATATTTATATATATATATATATATATATATATATATTTTAATTTTAAATATAAATCTATACACCATTATTGTTTTTGTAGAGAACAATAGATTTAATATAATATTATGTTTTAAATTAATATTTAAAAAACTTATATTTCCTCAAAATTCATAGAAGAGGTAGATAATAGATTTTATTATTTTTTTTAATTTTTTTTCAATATTTTCCTTATTTTTTATTATTTATAAAATAAAAAGTGATATAAGATGAAATAAGAAAGCACAAATATGATTTTTAAGATTTTAGGGAGGGGATGGTTTCAAGGTTTTTTTTTTTTGAAAAGATGGTTTCAATGTTCGTAGATTAATAAATTAATGAATGAAAAATATTGTGTACAAAGTAAAATTTTAGAAACTTATTTTTTAAAGAGTTTAAATTATTTCATAATTTTCTTTAAATATTATGATATTTATATTTTTTTTTTCATTTTTATCTTGAAGTAGGTCGTATGAGATTTTTAAATAAAGTAGATAATAAACATTTTACTTACTTATTTAAAATATATATATATATATATATATTATTATTTATAAGTATTTGAATAAATAAAAATATAATCTCACATGCAGAAAAAGAATTTCTCGTGCAAAGCACGTTCCAAAGTTCTAGTATTATTAAAAGGAAAGAGAAATGAATAACTTGGATTTCATCTTTTCCAAGCTTAAAAAAAAATAAATAAAGAAAATTCATGAAGATATAACATTCTATCTATAGTTAATAAAAACACGGTTACACACATATATATTATTAAAAGGAAAGAGAAATGAATAACTTGGATTTCATCTTTTCCAAGCTTAAAAAAAACAAAATAAACAAAATCCATTAAAATACAACATTCTATCTATAGTTTCGCATATTCTTTTCTTTTGTTTACCAATTATAATCTATGGTTGCCATTTTCTTCTTCACATCCATCTTCAAAACACTAACAATGATCTAACAAATACAAAACAAATCTCAATATACAATAAAAATAAATCAACAAAGCACAATTTCAAAATCTATTGAATAATTTGAGAATTACAAAATAAACATCCTATTTCTTCTAAATTACAAAGAGAGAAGAAGAACCTAATGGTTAAAGTTTTCAAAAGCAAGAATCTTATACAGTCAACCACACATAAACAATATAAACATGGAAGGAATGGTGATGAATCACAAAACTCTACTTTGAAATTGTTGAAGATAGCAAAAAGAAAAAAAAAACTTTCATCAAATTACAAATGACCATGCTCAAGTTGTTTTTAAGAAAATTGTTGGAAAAAGTTCAATATATATAGTTGTAGGGAAACAAAAGTTACAAATCCTATCAATTTTCGCCACTAAATATAATTAAAGATATTCTCATTAAATAATAAAAGTAAAGAGATAAAAAGTTGTGGGAGATGGAAGTTACCCATCTTTTAAATTCAACATTTAGTACAATTAATGAAAAAATTAAATTAAATTTTTAAGTTACGAAAATGAATTAAATAGTAAGTTATTGAAATGAGAGTTATAATTTTCTTTTCAAATTCGAGTATTAATGGAATAATAGGTTATAATTAATCTTTAAAACATAAAACATAAAACATCATAACATAATGGATGTTAAATGTATTAAAGGAACATTAAAAGAAACTTTTTTAAAAATATTTTAGGATGAAGTGGGTGTTTCTAGGGGGTGGGTGTAATTTAAAGTGTGGATTAAGGATAAAATGTTCCAAAAATGATTTACCCTCTAAGCCACCTTTTAAGGTTGTTAGATTTATTCGTGTTACTCAAATTTTATATAAAAGTTAAATTTGATAAAATTAATTCTATCCATATTATAGAATTAAAATTTTATCCATGCTATAAGGATGGTCTACTACCCATTCAAGTATATAAGAATTTGATACGATCAAAATTATGACCTAAATACGTACCTTTCTCATTAAATTGACGCTTCATAGAATTGAAGATAGAAGCAAAAAAGGGCACACTCATGTTTCGATGCAAAATAATACTTTTTGAGATTCATCAACACATGTTTGTGTATAAACCTCGAAAATGGGCATTTGTGTTTACTAATAAATTTCGGTCCGTCATAGATTACTACGTCACTATTCAAAATTTAACGACGAAATTAAATTAAAATTTGAGACAATATTTCTCAAAATTAAATTGGGTTTAAAATTGATTTATCTCGAATTTGAGTAAAAATTAAACCAGACTTAACTTCATTTAGTGAGCCAAACTAGAGAATCCAAACTTAAAAGGCCAAGTCCAAGGGCTAGGCCCAGCGGCCCATAAAAGGCCAAATTTATGGTCTGTTGAGCCCAATAAATAGAGGAGCTCTCCTTCATTGAAGAAGTTAAGAATTGGAAATTTCAGAGAAAATTCCATCAAAATTAAGACTTTCCAAATTTTCGAAGATCAAACAACACTTTGAAAGCCAAGCAATTCCAAACAAACATTCAAAGAGAAAGAATCAGATGGTCAATTCAAAGAGATTGAACTACTTTCACACAAAATCATCTCAAAATTTAAGTTCAACTACACGAATCAAAATTTCTTCGAAAATCCCGTGTGAACAGTTACATATTCTAGTTATTACCCCGTGAGGGGCAAAAGCCGATTTTCTATATTGGTAAGGTGTTAGGCCTAGCTTGATCAATAGTCTTGATTAGAGCTTGTGTGAACTTATTTTAGACTATATATCGCTTGGAGCATGTGAATAGGGGCCCTGGCCTTGTGCTAGGTGGAGCCAACCGAGAGCGATCGGGACTCATTCACATATGGTGGCACAATGGATGA

mRNA sequence

ATGGGAAAGTTCCTAAGATTGAAGGTGAATATTGATATTAGGCAACCATTAAGGAGAGCTATAAAAATTAAGAGTGGTACCATGGCTGAGGAGAAATGGGTTAGAATATCCTATGAGAAGCTTCCTGAATTCTGTTCAGGCTGTGGGAGAATTGGTCACTCAGTTAAAAAATGCAGCTTCGTGGTGATTGGGGAAGGAGTCCCGTTTCCTTTTGGTGAGGAGCTCCGTGAACCTCTGAGCTTCTTCAGAGGGGATCGTGGTCAGGCGGTTGACCATGAGATGGGAGGTCGAGGGAGAGGAAGAGGAAGGGGCTATGGTTGGAGGCAGACAACACAAAATCTTCGAGATGAAATGGGGGGGAACGATATTCATCACAGACGTGAGGAGTGGGTTCGTCAGCCGGAGCCCTTGCCGGAGAAGGTTAAAGGGTGTAATAACGGCTCACCGGCGACGAATTCCGTGGGGAAGGAAGCTTCGGCGTCCTGTCAAAATCAAAGTCAGAAGGGGGAGGTGGAGGTGCAGAGAAGAGAGCCAGCCAGGGCTTCAGGTCATACGAGGGATTTATTGGAATTGGAAATATTGCAGAAAGTTATCGCTGAGTCGGCTAAAGAAGCAGGGAGTGGGTCTAATGGGCTTCAACGAGTTGAGGATAAGGTGGGTAATGGTCAGAAGGGGGAAAATGGGGCAAAAATCGTTAGTGAGCCAATTGTAATGGATATTTCAACAGGGATGGAGAATTTTAAAGAGGGTGTTGGGCCAGGTAGTTTTAAAGAAGATTTGGGAGATGGCCATCGTAGTAGATGTAAGACAAGTATTGATAAAAAGGGAAAGGGGATTTGTATAGATGCTGAGACATATGGGTTCGAGGAGCAGACGACGCTAAAAAAGTTTGAGGTTATAGCGGTTAAGGAATCGAATGGGAATGTTAAGGTCGATAATAAAGAAATCTCTAAAAGGGAAGTGGAAGTTGAGCCCGTCATTAAGGATCAGCCGCTATCTTTAGTGGCGGGTCATGGGACGGAAGTTTTGAGAACGAAGACGGGTGGGGGGAAATGGAAGCGTAGAGCAAGGCTTGGAGGTAGTGAAGATTGCTCCCAGAATGAGGAGGGGAGAGCTGGCTTACCAAGGGGCCCTGGCCTTGTGCTAGGTGGAGCCAACCGAGAGCGATCGGGACTCATTCACATATGGTGGCACAATGGATGA

Coding sequence (CDS)

ATGGGAAAGTTCCTAAGATTGAAGGTGAATATTGATATTAGGCAACCATTAAGGAGAGCTATAAAAATTAAGAGTGGTACCATGGCTGAGGAGAAATGGGTTAGAATATCCTATGAGAAGCTTCCTGAATTCTGTTCAGGCTGTGGGAGAATTGGTCACTCAGTTAAAAAATGCAGCTTCGTGGTGATTGGGGAAGGAGTCCCGTTTCCTTTTGGTGAGGAGCTCCGTGAACCTCTGAGCTTCTTCAGAGGGGATCGTGGTCAGGCGGTTGACCATGAGATGGGAGGTCGAGGGAGAGGAAGAGGAAGGGGCTATGGTTGGAGGCAGACAACACAAAATCTTCGAGATGAAATGGGGGGGAACGATATTCATCACAGACGTGAGGAGTGGGTTCGTCAGCCGGAGCCCTTGCCGGAGAAGGTTAAAGGGTGTAATAACGGCTCACCGGCGACGAATTCCGTGGGGAAGGAAGCTTCGGCGTCCTGTCAAAATCAAAGTCAGAAGGGGGAGGTGGAGGTGCAGAGAAGAGAGCCAGCCAGGGCTTCAGGTCATACGAGGGATTTATTGGAATTGGAAATATTGCAGAAAGTTATCGCTGAGTCGGCTAAAGAAGCAGGGAGTGGGTCTAATGGGCTTCAACGAGTTGAGGATAAGGTGGGTAATGGTCAGAAGGGGGAAAATGGGGCAAAAATCGTTAGTGAGCCAATTGTAATGGATATTTCAACAGGGATGGAGAATTTTAAAGAGGGTGTTGGGCCAGGTAGTTTTAAAGAAGATTTGGGAGATGGCCATCGTAGTAGATGTAAGACAAGTATTGATAAAAAGGGAAAGGGGATTTGTATAGATGCTGAGACATATGGGTTCGAGGAGCAGACGACGCTAAAAAAGTTTGAGGTTATAGCGGTTAAGGAATCGAATGGGAATGTTAAGGTCGATAATAAAGAAATCTCTAAAAGGGAAGTGGAAGTTGAGCCCGTCATTAAGGATCAGCCGCTATCTTTAGTGGCGGGTCATGGGACGGAAGTTTTGAGAACGAAGACGGGTGGGGGGAAATGGAAGCGTAGAGCAAGGCTTGGAGGTAGTGAAGATTGCTCCCAGAATGAGGAGGGGAGAGCTGGCTTACCAAGGGGCCCTGGCCTTGTGCTAGGTGGAGCCAACCGAGAGCGATCGGGACTCATTCACATATGGTGGCACAATGGATGA

Protein sequence

MGKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCSFVVIGEGVPFPFGEELREPLSFFRGDRGQAVDHEMGGRGRGRGRGYGWRQTTQNLRDEMGGNDIHHRREEWVRQPEPLPEKVKGCNNGSPATNSVGKEASASCQNQSQKGEVEVQRREPARASGHTRDLLELEILQKVIAESAKEAGSGSNGLQRVEDKVGNGQKGENGAKIVSEPIVMDISTGMENFKEGVGPGSFKEDLGDGHRSRCKTSIDKKGKGICIDAETYGFEEQTTLKKFEVIAVKESNGNVKVDNKEISKREVEVEPVIKDQPLSLVAGHGTEVLRTKTGGGKWKRRARLGGSEDCSQNEEGRAGLPRGPGLVLGGANRERSGLIHIWWHNG
Homology
[Close]
BLAST of Sed0024332 vs. NCBI nr
Match: XP_039815364.1 (uncharacterized protein LOC120678302 [Panicum virgatum])

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-13
Identity = 88/303 (29.04%), Postives = 134/303 (44.22%), Query Frame = 0 

Query: 2   GKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCSFV 61
           G+FLR+KV I+I +PLRR I I  G  A+E+W  I+YE LP+FC  CGRIGH+ K C   
Sbjct: 101 GRFLRVKVRIEIEKPLRRGIMIDVGEGAQERWCPITYEFLPDFCYVCGRIGHTDKAC-LT 160

Query: 62  VIGEGVPFPFGEELR--EPLSFFRGDRGQAVDHEMGGRGR-----------GRGRGYGWR 121
            +  G   PFG ELR   P   F G+  ++ ++   G GR             GRG G R
Sbjct: 161 KLAAGEQAPFGRELRYIPPKKKFGGESWRSQENRRSGGGRSGGSGPWFSGGSGGRGVGGR 220

Query: 122 QTTQNL---RDEMGGNDIHHRREEWVRQPEPLP--------EKVKGCNNGSPATNSVGKE 181
             +  L   +D+MG        EE V  P  +         +K K C   + A  S  ++
Sbjct: 221 TRSDALSWRKDDMGEKTSGKGDEEEVNSPSKMDLPATHEKGDKAKKCLEDALAEMSQDEK 280

Query: 182 ASASCQNQSQKGEVEVQRREPARASGHTRDLLELEILQKVIAESAKEA----GSGSNGLQ 241
            +A+    S K E + Q+ +   A            ++KV+  S K +     S     Q
Sbjct: 281 DAAA--GGSGKREEKGQKNKETGAG-----------VEKVLEGSTKSSMQLEKSNQREGQ 340

Query: 242 RVEDKVGNGQKGENGAKIVSEPIVMDISTGMENFKEGVGPGSFKEDLGDGHRSRCKTSID 277
            ++ +    ++   G+K   E     +  G  N   G+      E+L  G R +  +++ 
Sbjct: 341 NLQTQPRKFKRQMRGSKTSDEQSGAGVVMGKRN---GMETMDVDEELDRGARRQGTSTLK 386

[Close]
BLAST of Sed0024332 vs. NCBI nr
Match: XP_039827601.1 (uncharacterized protein LOC120689378 [Panicum virgatum])

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-12
Identity = 74/221 (33.48%), Postives = 104/221 (47.06%), Query Frame = 0 

Query: 2   GKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCSFV 61
           G+FLR+KV I+I +PLRR I I  G  A+E+W  I+YE LP+FC  CGRIGH+ K C   
Sbjct: 164 GRFLRVKVRIEIEKPLRRGIMIDVGEGAQERWCPITYEFLPDFCYVCGRIGHTDKACLTK 223

Query: 62  VIGEGVPFPFGEELR--EPLSFFRGDRGQAVDHEMGGRGR-----------GRGRGYGWR 121
           +  E    PFG ELR   P   F G+  ++ ++   G GR             GRG G R
Sbjct: 224 LAAE-EQAPFGRELRYIPPKKKFGGESWRSQENRRSGGGRSGGSGPWFSGGSGGRGVGGR 283

Query: 122 QTTQNL---RDEMGGNDIHHRREEWVRQPEPLP--------EKVKGCNNGSPATNSVGKE 181
             +  L   +D+MG        EE V  P  +         +K K C   + A  S  ++
Sbjct: 284 TRSDALSWRKDDMGEKTRGKGDEEEVNSPSKMDLPATHEKGDKAKKCLEDALAEMSQDEK 343

Query: 182 ASASCQNQSQKGEVEVQRREPARA------SGHTRDLLELE 193
            +A+    S K E + Q+ +   A       G T   ++LE
Sbjct: 344 DAAA--GGSGKREEKGQKNKETGAGVEKVLEGSTNSSMQLE 381

[Close]
BLAST of Sed0024332 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 5.6e-12
Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 0 

Query: 2   GKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCS-- 61
           G F+R++V ID+ +PLRR IK+K+    ++ W  + YEKLP+FC  CG+IGHS ++C   
Sbjct: 165 GPFIRVRVKIDVSKPLRRGIKLKNSD-GKDIWCPLRYEKLPDFCYECGKIGHSGRECEQR 224

Query: 62  FVVIGEGVPFPFGEELREPL-----------SFFRGDRGQAVDHEMGGRGRGRGRGYGWR 121
             V+    P  +G+ LR  L            F+RG R        GGRG   GRG  WR
Sbjct: 225 SKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRG---GRG-DWR 284

Query: 122 QTTQNLRDEMGGNDIHHRREE 130
           +  +N RD  G    H R  E
Sbjct: 285 RRDENWRDIDGPESSHRRAVE 300

[Close]
BLAST of Sed0024332 vs. NCBI nr
Match: BAS74010.1 (Os01g0714300 [Oryza sativa Japonica Group])

HSP 1 Score: 80.9 bits (198), Expect = 2.8e-11
Identity = 83/281 (29.54%), Postives = 123/281 (43.77%), Query Frame = 0 

Query: 1   MGKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCSF 60
           +G+FLR+K+ +DIR+PL R + +  G   +  W  + YE LP+FC  CG IGH+ K C  
Sbjct: 35  VGRFLRIKIRLDIRKPLMRGVTVMIGKEEKALWCPLEYEFLPDFCYSCGIIGHTNKICEK 94

Query: 61  VVIGEGVPFPFGEELREPLSFFRGDRGQAVDHEMGGRGRGRGRGYGWRQTTQNLRDEMGG 120
            V+   +P PF ++LR   S  R D G       G RG G     GWR  +   R+  GG
Sbjct: 95  EVMKGELP-PFNKQLRCIPSKKRSDDG------YGDRGIGGRLQLGWRAGSGGSRESFGG 154

Query: 121 NDIHHRREEWVRQPEPLPEKVKGCNNGSPATNSVGKEASASCQNQSQKGEVEVQRREPAR 180
           +                     G  +GS     VG+E   S         ++V  +   R
Sbjct: 155 S---------------------GSRSGSGKPAKVGEEEVTS--------SIKVVEKLAVR 214

Query: 181 ASGHTRDLLELEILQKVIAESAKEAGSGSNGLQRVEDKVGNGQKGENGAKIVSEPIVMDI 240
            +     +LE E+   V+ +    A   S+G      +  +G K E+G+ IV+E  VM  
Sbjct: 215 PNVGRALVLEKEVHDLVLEDLVVNAPKVSSG------QTNDGGK-EDGSSIVTEHSVMQ- 269

Query: 241 STGMENFKEGVGP--GSFKEDLGDGHR-SRCKTSIDKKGKG 279
              M+N   GVG   G  +E  G+     R K     +G+G
Sbjct: 275 --SMQNDVGGVGGSLGKKEEVFGESKTGGRAKYKRRSRGEG 269

[Close]
BLAST of Sed0024332 vs. NCBI nr
Match: TXG57113.1 (hypothetical protein EZV62_018426 [Acer yangbiense])

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-10
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 2   GKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKC--- 61
           GKF+R+KV IDI +PL+R +++K G   E   V + YE+LPEFC  CG+IGH +K+C   
Sbjct: 166 GKFMRVKVRIDILKPLKRWLRLKLGKCDEITTVGLKYERLPEFCYACGKIGHGIKECFDE 225

Query: 62  -SFVVIGEGVPFPFGEELREPLS 81
            +     EG P  FG  L+ P++
Sbjct: 226 EARQYALEGSPTRFGSWLKAPVT 248

[Close]
BLAST of Sed0024332 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-12
Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 0 

Query: 2   GKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCS-- 61
           G F+R++V ID+ +PLRR IK+K+    ++ W  + YEKLP+FC  CG+IGHS ++C   
Sbjct: 165 GPFIRVRVKIDVSKPLRRGIKLKNSD-GKDIWCPLRYEKLPDFCYECGKIGHSGRECEQR 224

Query: 62  FVVIGEGVPFPFGEELREPL-----------SFFRGDRGQAVDHEMGGRGRGRGRGYGWR 121
             V+    P  +G+ LR  L            F+RG R        GGRG   GRG  WR
Sbjct: 225 SKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRG---GRG-DWR 284

Query: 122 QTTQNLRDEMGGNDIHHRREE 130
           +  +N RD  G    H R  E
Sbjct: 285 RRDENWRDIDGPESSHRRAVE 300

[Close]
BLAST of Sed0024332 vs. ExPASy TrEMBL
Match: A0A0P0V7D8 (Os01g0714300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0714300 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-11
Identity = 83/281 (29.54%), Postives = 123/281 (43.77%), Query Frame = 0 

Query: 1   MGKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCSF 60
           +G+FLR+K+ +DIR+PL R + +  G   +  W  + YE LP+FC  CG IGH+ K C  
Sbjct: 35  VGRFLRIKIRLDIRKPLMRGVTVMIGKEEKALWCPLEYEFLPDFCYSCGIIGHTNKICEK 94

Query: 61  VVIGEGVPFPFGEELREPLSFFRGDRGQAVDHEMGGRGRGRGRGYGWRQTTQNLRDEMGG 120
            V+   +P PF ++LR   S  R D G       G RG G     GWR  +   R+  GG
Sbjct: 95  EVMKGELP-PFNKQLRCIPSKKRSDDG------YGDRGIGGRLQLGWRAGSGGSRESFGG 154

Query: 121 NDIHHRREEWVRQPEPLPEKVKGCNNGSPATNSVGKEASASCQNQSQKGEVEVQRREPAR 180
           +                     G  +GS     VG+E   S         ++V  +   R
Sbjct: 155 S---------------------GSRSGSGKPAKVGEEEVTS--------SIKVVEKLAVR 214

Query: 181 ASGHTRDLLELEILQKVIAESAKEAGSGSNGLQRVEDKVGNGQKGENGAKIVSEPIVMDI 240
            +     +LE E+   V+ +    A   S+G      +  +G K E+G+ IV+E  VM  
Sbjct: 215 PNVGRALVLEKEVHDLVLEDLVVNAPKVSSG------QTNDGGK-EDGSSIVTEHSVMQ- 269

Query: 241 STGMENFKEGVGP--GSFKEDLGDGHR-SRCKTSIDKKGKG 279
              M+N   GVG   G  +E  G+     R K     +G+G
Sbjct: 275 --SMQNDVGGVGGSLGKKEEVFGESKTGGRAKYKRRSRGEG 269

[Close]
BLAST of Sed0024332 vs. ExPASy TrEMBL
Match: A0A5C7HJ97 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018426 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-10
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 2   GKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKC--- 61
           GKF+R+KV IDI +PL+R +++K G   E   V + YE+LPEFC  CG+IGH +K+C   
Sbjct: 166 GKFMRVKVRIDILKPLKRWLRLKLGKCDEITTVGLKYERLPEFCYACGKIGHGIKECFDE 225

Query: 62  -SFVVIGEGVPFPFGEELREPLS 81
            +     EG P  FG  L+ P++
Sbjct: 226 EARQYALEGSPTRFGSWLKAPVT 248

[Close]
BLAST of Sed0024332 vs. ExPASy TrEMBL
Match: A0A5C7H399 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023915 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-10
Identity = 49/114 (42.98%), Postives = 65/114 (57.02%), Query Frame = 0 

Query: 2   GKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCSFV 61
           GKF+R+KV+IDI +PL+R +K+KSGT  E   V + YE+L  FC  CGRIGH +K+C   
Sbjct: 135 GKFMRVKVSIDITKPLKRWLKLKSGTSEEIIMVGLKYERLLHFCYACGRIGHGIKECMDE 194

Query: 62  VIGE-GVPFPFGEELREPLSFFRGDRGQAVDHEMGGRG-RGRGRGYGWRQTTQN 114
           V  + G P  FG  L+   S F   R +      GG   R R  G   R TT++
Sbjct: 195 VARKAGTPTKFGSWLK--ASTFEKGRPRFNSKGSGGSSDRSRSLGAS-RDTTKD 245

[Close]
BLAST of Sed0024332 vs. ExPASy TrEMBL
Match: A0A5C7IWT1 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002128 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.4e-10
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 2   GKFLRLKVNIDIRQPLRRAIKIKSGTMAEEKWVRISYEKLPEFCSGCGRIGHSVKKCSFV 61
           GK++R+KV IDI +PL+R ++ K G   E   V + YE+LP+FC  CGRIGH +K+C   
Sbjct: 128 GKYMRVKVRIDIWKPLKRWLRFKPGATDEIIMVGLKYERLPDFCFACGRIGHGIKECLDE 187

Query: 62  VIG----EGVPFPFGEELREPL 80
           V      +G P  +G  L+ P+
Sbjct: 188 VARQEALDGSPTKYGSWLKAPI 209

The following BLAST results are available for this feature:
BLAST of Sed0024332 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_039815364.15.1e-1329.04uncharacterized protein LOC120678302 [Panicum virgatum][more]
XP_039827601.11.5e-1233.48uncharacterized protein LOC120689378 [Panicum virgatum][more]
XP_022149484.15.6e-1238.30uncharacterized protein LOC111017902 [Momordica charantia][more]
BAS74010.12.8e-1129.54Os01g0714300 [Oryza sativa Japonica Group][more]
TXG57113.12.4e-1044.58hypothetical protein EZV62_018426 [Acer yangbiense][more]
BLAST of Sed0024332 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0024332 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D7652.7e-1238.30uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A0P0V7D81.4e-1129.54Os01g0714300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0714300 PE... [more]
A0A5C7HJ971.1e-1044.58CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01842... [more]
A0A5C7H3995.7e-1042.98CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02391... [more]
A0A5C7IWT17.4e-1042.68CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00212... [more]
BLAST of Sed0024332 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 11..59
e-value: 2.9E-15
score: 55.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..169

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0024332.1Sed0024332.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding