Sed0024285 (gene) Chayote v1

Overview
NameSed0024285
Typegene
OrganismSechium edule (Chayote v1)
DescriptionReverse transcriptase domain-containing protein
LocationLG01: 4804318 .. 4805439 (+)
RNA-Seq ExpressionSed0024285
SyntenySed0024285
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAAGGTAACCTTGAAGCAACTAAGCATCCCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAGCGGGCGATCGACATGATACGACTTGAGGTCATCACTGGCGAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGAAAACATATCGACTACTATTGGGACGACCCTGGATTCATGAAAATCAAGTTGTTACCTCCTCGTTGCATCAATGCTTCAAGTTTTACCAAGATGGGGTTAAGAAAGTAGAAGCTGACACAAATCCATTCTTGGAGGCCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGATTGTGGAGAAAACAGTGCCACAGGAGGTCCCTGCGATAAAAGAGAATGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAGAAGAAAAGTCATGCCCTGTAAAGATAGAGGCTTCAACGAGTCTAGCAGCTCCTAAGGCTCCAAAAGATGAGAAACTTTCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAATGGTGAAGCACCTTTCGCCGAATGTTCTAAAAGTTTGAAAGTAGGTGATATCGAAGTATTGAAGGAAAGTTTCACCACTCCTTTGACAAAGGTGAAAAAGCAATGGAGTCAGAGGAACGAAGGAGATGAGAAGAAGGTGGTTTTACCTGAGAAACGCACAAGCGATGGATTTGACCCCAATGCGTACAAACTTCTGGCTAATGCAGGATATGATTTCACGACACATACCGAGTTCAAACGCTTAAGCATATTTGATGACCAAGCCGAGCTTTCTTTGATGAAAAAGAAACTGTTGAAGAAAGGTTACTCTCTACCAACGTCAAGAAAAGGAGTCGGATATAAGTCATCGGAACCAATTCGCATAACAAGAAGAGATAAAACAAAGATGGAAGATGCCAACCACATAACGATTCAAGAGGTTGAAGAATCGAAGAAAGAGAAGAATGTCGGTCGCAAAGTACCCACCCTTAAACACATTGGATCATCAATCGCTCGTGTTGCCGCACTTCAAAGGTTGGAGTACAGTAGCAGGAAAAAATAA

mRNA sequence

ATGTCGAAGGTAACCTTGAAGCAACTAAGCATCCCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAGCGGGCGATCGACATGATACGACTTGAGGTCATCACTGGCGAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGAAAACATATCGACTACTATTGGGACGACCCTGGATTCATGAAAATCAAGTTGTTACCTCCTCGTTGCATCAATGCTTCAAGTTTTACCAAGATGGGGTTAAGAAAGTAGAAGCTGACACAAATCCATTCTTGGAGGCCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGATTGTGGAGAAAACAGTGCCACAGGAGGTCCCTGCGATAAAAGAGAATGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAGAAGAAAAGTCATGCCCTGTAAAGATAGAGGCTTCAACGAGTCTAGCAGCTCCTAAGGCTCCAAAAGATGAGAAACTTTCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAATGGTGAAGCACCTTTCGCCGAATGTTCTAAAAGTTTGAAAGTAGGTGATATCGAAGTATTGAAGGAAAGTTTCACCACTCCTTTGACAAAGGTGAAAAAGCAATGGAGTCAGAGGAACGAAGGAGATGAGAAGAAGGTGGTTTTACCTGAGAAACGCACAAGCGATGGATTTGACCCCAATGCGTACAAACTTCTGGCTAATGCAGGATATGATTTCACGACACATACCGAGTTCAAACGCTTAAGCATATTTGATGACCAAGCCGAGCTTTCTTTGATGAAAAAGAAACTGTTGAAGAAAGGTTACTCTCTACCAACGTCAAGAAAAGGAGTCGGATATAAGTCATCGGAACCAATTCGCATAACAAGAAGAGATAAAACAAAGATGGAAGATGCCAACCACATAACGATTCAAGAGGTTGAAGAATCGAAGAAAGAGAAGAATGTCGGTCGCAAAGTACCCACCCTTAAACACATTGGATCATCAATCGCTCGTGTTGCCGCACTTCAAAGGTTGGAGTACAGTAGCAGGAAAAAATAA

Coding sequence (CDS)

ATGTCGAAGGTAACCTTGAAGCAACTAAGCATCCCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAGCGGGCGATCGACATGATACGACTTGAGGTCATCACTGGCGAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGAAAACATATCGACTACTATTGGGACGACCCTGGATTCATGAAAATCAAGTTGTTACCTCCTCGTTGCATCAATGCTTCAAGTTTTACCAAGATGGGGTTAAGAAAGTAGAAGCTGACACAAATCCATTCTTGGAGGCCGAGTCTCATTTCGCCGATGCAAAATTCTATGCAAAGAACGAGATTGTGGAGAAAACAGTGCCACAGGAGGTCCCTGCGATAAAAGAGAATGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAGAAGAAAAGTCATGCCCTGTAAAGATAGAGGCTTCAACGAGTCTAGCAGCTCCTAAGGCTCCAAAAGATGAGAAACTTTCAACTTCACCCATCTTACGCTATGTCCCTATATCCCGACGAAAAAATGGTGAAGCACCTTTCGCCGAATGTTCTAAAAGTTTGAAAGTAGGTGATATCGAAGTATTGAAGGAAAGTTTCACCACTCCTTTGACAAAGGTGAAAAAGCAATGGAGTCAGAGGAACGAAGGAGATGAGAAGAAGGTGGTTTTACCTGAGAAACGCACAAGCGATGGATTTGACCCCAATGCGTACAAACTTCTGGCTAATGCAGGATATGATTTCACGACACATACCGAGTTCAAACGCTTAAGCATATTTGATGACCAAGCCGAGCTTTCTTTGATGAAAAAGAAACTGTTGAAGAAAGGTTACTCTCTACCAACGTCAAGAAAAGGAGTCGGATATAAGTCATCGGAACCAATTCGCATAACAAGAAGAGATAAAACAAAGATGGAAGATGCCAACCACATAACGATTCAAGAGGTTGAAGAATCGAAGAAAGAGAAGAATGTCGGTCGCAAAGTACCCACCCTTAAACACATTGGATCATCAATCGCTCGTGTTGCCGCACTTCAAAGGTTGGAGTACAGTAGCAGGAAAAAATAA

Protein sequence

MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKTYRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIVEKTVPQEVPAIKENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPKDEKLSTSPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRNEGDEKKVVLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLKKGYSLPTSRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNVGRKVPTLKHIGSSIARVAALQRLEYSSRKK
Homology
BLAST of Sed0024285 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-103
Identity = 211/373 (56.57%), Postives = 265/373 (71.05%), Query Frame = 0

Query: 1    MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
            M K T+ QL I M+ELS+SKL+IQGFNQG QRAI MIRLE+I G+L A ALFHVID + T
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
            Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKTVPQEVPAIKENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPKDEKLST 180
             + +P E P  K  + ++LK  A  +     R   S   K EA TS       KDE  + 
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSSTKGMILKDENAAN 953

Query: 181  SPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRNEGDEKKV 240
            +P+LRYVP+SRRK GE+PF E  K LKVGDIE++KESFTTPLTK+ K   Q  + D  + 
Sbjct: 954  TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 1013

Query: 241  VLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLKKGYSLPT 300
             LP++RT DGFDP AYKL+A AGYDFT HTEFK L I  D+ ELS  +KKLL++G+S+P 
Sbjct: 1014 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 1073

Query: 301  SRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNVGRKVPTLKHIGSSIARV 360
            SRKG+GYKS EPIRIT++ K K+ D NHITI+E + +  ++   +++     I  S+AR 
Sbjct: 1074 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 1133

Query: 361  AALQRLEYSSRKK 374
               +RL  +  ++
Sbjct: 1134 VVFERLSMTEAER 1140

BLAST of Sed0024285 vs. NCBI nr
Match: XP_031737372.1 (uncharacterized protein LOC116402244 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-103
Identity = 211/373 (56.57%), Postives = 265/373 (71.05%), Query Frame = 0

Query: 1   MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
           M K T+ QL I M+ELS+SKL+IQGFNQG QRAI MIRLE+I G+L A ALFHVID + T
Sbjct: 149 MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 208

Query: 61  YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
           Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 209 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 268

Query: 121 EKTVPQEVPAIKENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPKDEKLST 180
            + +P E P  K  + ++LK  A  +     R   S   K EA TS       KDE  + 
Sbjct: 269 LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSSTKGMILKDENAAN 328

Query: 181 SPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRNEGDEKKV 240
           +P+LRYVP+SRRK GE+PF E  K LKVGDIE++KESFTTPLTK+ K   Q  + D  + 
Sbjct: 329 TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 388

Query: 241 VLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLKKGYSLPT 300
            LP++RT DGFDP AYKL+A AGYDFT HTEFK L I  D+ ELS  +KKLL++G+S+P 
Sbjct: 389 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 448

Query: 301 SRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNVGRKVPTLKHIGSSIARV 360
           SRKG+GYKS EPIRIT++ K K+ D NHITI+E + +  ++   +++     I  S+AR 
Sbjct: 449 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 508

Query: 361 AALQRLEYSSRKK 374
              +RL  +  ++
Sbjct: 509 VVFERLSMTEAER 515

BLAST of Sed0024285 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-103
Identity = 211/373 (56.57%), Postives = 265/373 (71.05%), Query Frame = 0

Query: 1    MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
            M K T+ QL I M+ELS+SKL+IQGFNQG QRAI MIRLE+I G+L A ALFHVID + T
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
            Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKTVPQEVPAIKENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPKDEKLST 180
             + +P E P  K  + ++LK  A  +     R   S   K EA TS       KDE  + 
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSSTKGMILKDENAAN 953

Query: 181  SPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRNEGDEKKV 240
            +P+LRYVP+SRRK GE+PF E  K LKVGDIE++KESFTTPLTK+ K   Q  + D  + 
Sbjct: 954  TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 1013

Query: 241  VLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLKKGYSLPT 300
             LP++RT DGFDP AYKL+A AGYDFT HTEFK L I  D+ ELS  +KKLL++G+S+P 
Sbjct: 1014 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 1073

Query: 301  SRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNVGRKVPTLKHIGSSIARV 360
            SRKG+GYKS EPIRIT++ K K+ D NHITI+E + +  ++   +++     I  S+AR 
Sbjct: 1074 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 1133

Query: 361  AALQRLEYSSRKK 374
               +RL  +  ++
Sbjct: 1134 VVFERLSMTEAER 1140

BLAST of Sed0024285 vs. NCBI nr
Match: XP_031740568.1 (uncharacterized protein LOC116403508 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-103
Identity = 211/373 (56.57%), Postives = 265/373 (71.05%), Query Frame = 0

Query: 1    MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
            M K T+ QL I M+ELS+SKL+IQGFNQG QRAI MIRLE+I G+L A ALFHVID + T
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
            Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKTVPQEVPAIKENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPKDEKLST 180
             + +P E P  K  + ++LK  A  +     R   S   K EA TS       KDE  + 
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSSTKGMILKDENAAN 953

Query: 181  SPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRNEGDEKKV 240
            +P+LRYVP+SRRK GE+PF E  K LKVGDIE++KESFTTPLTK+ K   Q  + D  + 
Sbjct: 954  TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 1013

Query: 241  VLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLKKGYSLPT 300
             LP++RT DGFDP AYKL+A AGYDFT HTEFK L I  D+ ELS  +KKLL++G+S+P 
Sbjct: 1014 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 1073

Query: 301  SRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNVGRKVPTLKHIGSSIARV 360
            SRKG+GYKS EPIRIT++ K K+ D NHITI+E + +  ++   +++     I  S+AR 
Sbjct: 1074 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 1133

Query: 361  AALQRLEYSSRKK 374
               +RL  +  ++
Sbjct: 1134 VVFERLSMTEAER 1140

BLAST of Sed0024285 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 1.7e-103
Identity = 211/373 (56.57%), Postives = 265/373 (71.05%), Query Frame = 0

Query: 1    MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
            M K T+ QL I M+ELS+SKL+IQGFNQG QRAI MIRLE+I G+L A ALFHVID + T
Sbjct: 774  MPKSTMWQLGILMDELSNSKLVIQGFNQGSQRAIGMIRLELIIGDLKASALFHVIDSRTT 833

Query: 61   YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
            Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY+KN  +
Sbjct: 834  YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYSKNNNI 893

Query: 121  EKTVPQEVPAIKENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPKDEKLST 180
             + +P E P  K  + ++LK  A  +     R   S   K EA TS       KDE  + 
Sbjct: 894  LEVLPAETPLTKGEDNSQLKSLATTEPHESARTFNS--GKGEAYTSNTKGMILKDENAAN 953

Query: 181  SPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRNEGDEKKV 240
            +P+LRYVP+SRRK GE+PF E  K LKVGDIE++KESFTTPLTK+ K   Q  + D  + 
Sbjct: 954  TPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFTTPLTKIAK---QEVKVDLVEA 1013

Query: 241  VLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLKKGYSLPT 300
             LP++RT DGFDP AYKL+A AGYDFT HTEFK L I  D+ ELS  +KKLL++G+S+P 
Sbjct: 1014 NLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEI-HDRPELSSTQKKLLREGHSIPV 1073

Query: 301  SRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNVGRKVPTLKHIGSSIARV 360
            SRKG+GYKS EPIRIT++ K K+ D NHITI+E + +  ++   +++     I  S+AR 
Sbjct: 1074 SRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGDNQRISVFDRIRPSVARP 1133

Query: 361  AALQRLEYSSRKK 374
               +RL  +  ++
Sbjct: 1134 VVFERLSMTEAER 1140

BLAST of Sed0024285 vs. ExPASy TrEMBL
Match: A0A5A7UD46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001280 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.0e-101
Identity = 208/373 (55.76%), Postives = 263/373 (70.51%), Query Frame = 0

Query: 1   MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
           M K T++QL I MEELS+SKL+IQGFNQG QR I MIRLE+I G+L   ALFHVID + T
Sbjct: 154 MPKSTMRQLGILMEELSNSKLIIQGFNQGSQRIIGMIRLELIIGDLKDSALFHVIDSRTT 213

Query: 61  YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
           Y+LLLGRPWIH N VVTS+LHQCFKFYQDGVKKVEAD+NPF EAESHFADAKFY KN+  
Sbjct: 214 YKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVEADSNPFSEAESHFADAKFYLKNDSS 273

Query: 121 EKTVPQEVPAIKENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPKDEKLST 180
            + V  EV  +   +  +LK  A  +    +    S   K EAST+ A      DEK S 
Sbjct: 274 LEVVSVEVLLVNREDNLQLKSLASKEPHKSIGTFHS--GKSEASTNTAKSVILMDEKTSN 333

Query: 181 SPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRNEGDEKKV 240
            PILRYVP+SRRK GE+PF E  + LKVG+IEVLKESFTTPLTK+ K   Q  + D  + 
Sbjct: 334 PPILRYVPLSRRKKGESPFVESPQGLKVGEIEVLKESFTTPLTKITK---QEIKIDLTEA 393

Query: 241 VLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLKKGYSLPT 300
            LP++RT DGFDP AYKL+A AGYDFTTHTEFK L I+ +Q +LS  +KKLL++G+ +P 
Sbjct: 394 SLPQRRTKDGFDPKAYKLMAKAGYDFTTHTEFKSLKIY-EQPKLSSTQKKLLREGHVIPM 453

Query: 301 SRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNVGRKVPTLKHIGSSIARV 360
           SRKG+GYKS EPIRITR+ K K+ D+NHIT++E +  ++++   ++      I   +AR 
Sbjct: 454 SRKGLGYKSPEPIRITRKGKEKVVDSNHITLKEADSMEEKEGDSQRTSAFDRISPHVARA 513

Query: 361 AALQRLEYSSRKK 374
              ++L  +  ++
Sbjct: 514 PVFEKLSMTEAER 520

BLAST of Sed0024285 vs. ExPASy TrEMBL
Match: A0A5A7UEC9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00760 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100
Identity = 205/366 (56.01%), Postives = 259/366 (70.77%), Query Frame = 0

Query: 1   MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
           M K T++Q  I MEEL +SKL+IQGFNQG QR I +IRLE+I G+L A ALFHVI+ + T
Sbjct: 1   MPKSTMRQSGILMEELLNSKLVIQGFNQGSQRVIGIIRLELIIGDLKASALFHVINSRTT 60

Query: 61  YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
           Y+LLLGRPWIH N VVTS+LH CFKFYQDGVKKVE D+NPF EAESHFADAKFY KN+  
Sbjct: 61  YKLLLGRPWIHGNGVVTSTLHHCFKFYQDGVKKVEVDSNPFSEAESHFADAKFYLKNDSS 120

Query: 121 EKTVPQEVPAIKENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPKDEKLST 180
            + V +EVP +   +  +LK  A  +    +    S   K E STS A      DEK S 
Sbjct: 121 PEAVSKEVPLVNREDNLQLKSLASKEPHKSIGTFHS--GKSEVSTSTAKSVILMDEKTSN 180

Query: 181 SPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRNEGDEKKV 240
            PILRYVP+SRRK GE+PF E  + LKVGDIEVLKESFTTPLTK+ K   +  + D  + 
Sbjct: 181 PPILRYVPLSRRKKGESPFVESPQGLKVGDIEVLKESFTTPLTKINK---KEIKIDLTEA 240

Query: 241 VLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLKKGYSLPT 300
            LP++RT DGFDP AYKL+A AGYDF THTEFK L I  +Q +LS  +KKLL++G+++P 
Sbjct: 241 SLPQRRTKDGFDPKAYKLMAKAGYDFITHTEFKILKI-HEQPKLSSTQKKLLQEGHAIPM 300

Query: 301 SRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNVGRKVPTLKHIGSSIARV 360
           SRKG+GYKS EPIRITR+ K K+ D+NHIT++EV+  +++++  ++      I   +AR 
Sbjct: 301 SRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEDDSQRTSAFDRISPHVARA 360

Query: 361 AALQRL 367
              +RL
Sbjct: 361 PVFERL 360

BLAST of Sed0024285 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97
Identity = 191/380 (50.26%), Postives = 266/380 (70.00%), Query Frame = 0

Query: 1    MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
            + K T+ QL I +EELS+SKL+IQGFNQG QRAI  +RLEV+ G+L A  +FHVID + T
Sbjct: 766  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 825

Query: 61   YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
            Y++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF +AESHFADAKFY K+E V
Sbjct: 826  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 885

Query: 121  EKTVPQEVPAIK---ENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPK--- 180
             + +  EVP  K   +NE+  +  +   K   +  ++     ++   T L AP+A K   
Sbjct: 886  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNG---ELTTETKLRAPEAEKIAT 945

Query: 181  -DEKLSTSPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRN 240
              +++S  P+LRY+P+SRRK GE+PF ECSK+L V + E+LKE+FT PLTK++K  +++ 
Sbjct: 946  LQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKI 1005

Query: 241  EGDEKKVVLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLK 300
            E  + +  LPE+RT +GFDP AYKL+A AGYDFTT TE K + IFD++ ELS  +KKL K
Sbjct: 1006 EKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQK 1065

Query: 301  KGYSLPTSRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNV-GRKVPTLKH 360
            +GYS+P SR G+GY+SSEP+RIT + K K+ +  HIT++E ++S++ K V  ++      
Sbjct: 1066 QGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDR 1125

Query: 361  IGSSIARVAALQRLEYSSRK 373
            I  S  R +  QR+  S  K
Sbjct: 1126 IAFSAIRPSVFQRVSTSIAK 1142

BLAST of Sed0024285 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97
Identity = 191/380 (50.26%), Postives = 266/380 (70.00%), Query Frame = 0

Query: 1    MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
            + K T+ QL I +EELS+SKL+IQGFNQG QRAI  +RLEV+ G+L A  +FHVID + T
Sbjct: 744  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 803

Query: 61   YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
            Y++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF +AESHFADAKFY K+E V
Sbjct: 804  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 863

Query: 121  EKTVPQEVPAIK---ENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPK--- 180
             + +  EVP  K   +NE+  +  +   K   +  ++     ++   T L AP+A K   
Sbjct: 864  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNG---ELTTETKLRAPEAEKIAT 923

Query: 181  -DEKLSTSPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRN 240
              +++S  P+LRY+P+SRRK GE+PF ECSK+L V + E+LKE+FT PLTK++K  +++ 
Sbjct: 924  LQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKI 983

Query: 241  EGDEKKVVLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLK 300
            E  + +  LPE+RT +GFDP AYKL+A AGYDFTT TE K + IFD++ ELS  +KKL K
Sbjct: 984  EKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQK 1043

Query: 301  KGYSLPTSRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNV-GRKVPTLKH 360
            +GYS+P SR G+GY+SSEP+RIT + K K+ +  HIT++E ++S++ K V  ++      
Sbjct: 1044 QGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDR 1103

Query: 361  IGSSIARVAALQRLEYSSRK 373
            I  S  R +  QR+  S  K
Sbjct: 1104 IAFSAIRPSVFQRVSTSIAK 1120

BLAST of Sed0024285 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97
Identity = 191/380 (50.26%), Postives = 266/380 (70.00%), Query Frame = 0

Query: 1    MSKVTLKQLSIPMEELSDSKLLIQGFNQGGQRAIDMIRLEVITGELSADALFHVIDCKKT 60
            + K T+ QL I +EELS+SKL+IQGFNQG QRAI  +RLEV+ G+L A  +FHVID + T
Sbjct: 696  LPKSTMNQLGISVEELSNSKLVIQGFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTT 755

Query: 61   YRLLLGRPWIHENQVVTSSLHQCFKFYQDGVKKVEADTNPFLEAESHFADAKFYAKNEIV 120
            Y++LLGRPWIHEN +VTS+LHQCFKFY+ G+KKV+AD+ PF +AESHFADAKFY K+E V
Sbjct: 756  YKMLLGRPWIHENGIVTSTLHQCFKFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDV 815

Query: 121  EKTVPQEVPAIK---ENEKAKLKPEADIKKKWVVREEKSCPVKIEASTSLAAPKAPK--- 180
             + +  EVP  K   +NE+  +  +   K   +  ++     ++   T L AP+A K   
Sbjct: 816  SEIISTEVPVTKGTFKNEQEMITSKKSSKGDALNSQQNG---ELTTETKLRAPEAEKIAT 875

Query: 181  -DEKLSTSPILRYVPISRRKNGEAPFAECSKSLKVGDIEVLKESFTTPLTKVKKQWSQRN 240
              +++S  P+LRY+P+SRRK GE+PF ECSK+L V + E+LKE+FT PLTK++K  +++ 
Sbjct: 876  LQKEVSNPPVLRYIPLSRRKKGESPFTECSKNLTVKNTEILKENFTAPLTKIEKGEAKKI 935

Query: 241  EGDEKKVVLPEKRTSDGFDPNAYKLLANAGYDFTTHTEFKRLSIFDDQAELSLMKKKLLK 300
            E  + +  LPE+RT +GFDP AYKL+A AGYDFTT TE K + IFD++ ELS  +KKL K
Sbjct: 936  EKKDLQAYLPERRTVEGFDPKAYKLMAKAGYDFTTRTELKSVKIFDERPELSPTQKKLQK 995

Query: 301  KGYSLPTSRKGVGYKSSEPIRITRRDKTKMEDANHITIQEVEESKKEKNV-GRKVPTLKH 360
            +GYS+P SR G+GY+SSEP+RIT + K K+ +  HIT++E ++S++ K V  ++      
Sbjct: 996  QGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDR 1055

Query: 361  IGSSIARVAALQRLEYSSRK 373
            I  S  R +  QR+  S  K
Sbjct: 1056 IAFSAIRPSVFQRVSTSIAK 1072

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031739134.11.3e-10356.57uncharacterized protein LOC116402863 [Cucumis sativus][more]
XP_031737372.11.3e-10356.57uncharacterized protein LOC116402244 [Cucumis sativus][more]
XP_031735972.11.3e-10356.57uncharacterized protein LOC116401693 [Cucumis sativus][more]
XP_031740568.11.3e-10356.57uncharacterized protein LOC116403508 [Cucumis sativus][more]
XP_031742032.11.7e-10356.57uncharacterized protein LOC116404025 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UD461.0e-10155.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UEC91.5e-10056.01Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TZU93.4e-9750.26Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]
A0A5D3BIH83.4e-9750.26Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D1E53.4e-9750.26Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0024285.1Sed0024285.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process