Sed0024247 (gene) Chayote v1

Overview


Name	Sed0024247
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG05: 2339197 .. 2341868 (-)
RNA-Seq Expression	Sed0024247
Synteny	Sed0024247

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGTTCTAGTCCTCATCTTTCAATGGTAGAATTAAAAAAAAAGTTTTTTTTAGGTTTTTTTTTTGGGAGAGAGAAAGAAAAAAAGAGTTGAAGTTTGAAGAAGCGGATAGGAAGGCTCGGCCTTGGGTTGCGAGAGAGAATTTATTTTTGTTTACTTTTTTATTTTTTTTATTATTTATTTCTTTTCTTTTCTTTCATCGTTTTGTTTTGTTGGTTGAATTCTTTATCTCTCTCTCTCTCTCTCTCTTTTTGCGCTCAAAATTCGCCCAGATTCGCCGATTTCTATCGGAACAATCGCACGGTTTCTGCAAAATTCCTCAACCAGATTCGGTTTCGCCTCATTCGATTTGGTTTTCAGGTAATTTCTTCTTCTTTTTTTGGATTTTTCATCGATTACAAATTGTTAGGTTTCATGATTCGTTATCATTTCCGCGAATTTTGAATCTGTCTATCGCTTTCTGTAATGCGGATGAGGATGATACTTTGTGGTGATTGGCTGTAATCCTGCTTTTGATTGTTTGACCGATGGGGGATCTTGGATCTGACTATTCACTAGATCTGTTTTGAATTTTCCAAGTTTTTTTATGGGGTTTTCTTCTTTTTCCGAGATGATCTACCTATGATTTGTGATCGTTGAGTAAATATGTTCCTGAATCATGTTTAGATTTAGATCATGTATAGATTTTATTCTTGTGGTTTGGTTACATATATTAGACTGTGTGAGTTATTCCCCTTTGAGGAGATGACAATTGATTCAATCTTTTCTCCATTTTCTTGATTCAGCTTGATCTCTTCAATTAATTTTAATTCTCACTTGTTTGATATTTCTCAAATTTTCAAGTGCATTAGTGATTGAAATGTTAGTTGATATAATTAAATTTAAGCTTTTGGGTTGATTGACGATTTACCATGTTTCAACATGATCAATTCTATTCTCTGATTTCCTTTGTGACAGAAAAATAGAATAGTGGAAACTGTGGTTTCTTGCGGGGAGGAAAACGGATATCGTACAAAGGGGAAAGGGTAAAAAGAACTGCGGGTTGAGGATGGACACGGCGAATGCAACAAGTTATTGGTGTCATATGTGTTCTCAAACAGTGAATCCCATCATTGATGTCGAAATTAAATGCCCCTTCTGTCGTAGTGGGTTTGTTGAAGAGATGGTTAATGGCAGCAGCGGTGTTTCCAGTGACAATAATGAGCTTGAATCTGAGTTTGGATCGGAGCGAGCTTTGTCCCTTTGGGCCCCGATCTTGCTTGGTATGATGGGAAATCCCCGTGGGCGGCGTAGATTCAGGCATCTTGAGTTTGATGAGGACGATGATGATAATGACAATGGTGATGGGGAAGGGCACCGTTTGACTGAGCCTACCGAGTTGGATCGAGAGCTTGATTCAGTCATTAGGAGGAGGAGAAATTCAGCTACCATTCTACAGTTGCTTCAAGATATCAGAGCTGGAATGACAACTGAATCGGAGAATTATGAGGGAGAGAGGAACCGAGAGCGGGATCGAGATCAAGAGCGGGTTATTCTCATAAATCCTCTCAATCAAACCATTGTAGTTCAAGGAGCTGGTCAAACTGAGAATCAAAATCACTCTATTGGGTCATTGGGTGATTATTTCGTTGGACCTGGCTTGGATTTGTTATTGCAACATCTAGCTGAGAATGATCCTAATAGATATGGTACTCCACCAGCACAGAAGGAGGCGGTCGATGCGCTGCCCGTGGTGAGAGTTAAGGGTGGTTTGCAATGTTCAGTGTGTTTGGATGATTTTGAGGTTGATGCAGAAGCCAAAGAGATGCCATGTAAGCATAAATTTCACACTGGCTGTATTCTGCCATGGCTTGAGCTGCATAGTTCTTGCCCAGTTTGTAGGCATCAATTGCCTGCCGATGAATCGAAGCGAGACGTTGATGGTGGTGAATCTGGTAGGTTCATGGGTGACCTTAATGTAAATGTTAATGGTGGGGAGGTTGAGGACGAGAGAAACAATGCTTCCGGGCGGAGGTTTTCGTTTCCATGGCCATTCAATGGCTTGTTTTCAGCACAAGGTGGAGCTGGGAACTTTTCTGGAGGAAGTACAAGTGATTCTCAAAGGGATGAGAGTTCCATTTGAGTTATCATCATATGAAGAACCTGTTTGATATTGATATTGAGATGGTGCTCCTGCTCTGTTTGCTGTATCAATTGTGTATGTTATTGTATGTATGTGTATGTACGTTTTTTTTTTATTTTTTATAACTAGGAATCGAAGCTTTGTTCCTCTACATGTTCAGGGGCACCCACTTCCATCCTAAATTTGGGTCCGAGAGACTACAAGAAATTTTACAATTAAGTTCATTCGTGAGTTTCAACCAATGACTTTCAAGAGAACATGTTTTGAAGACCCCAAACCAAACATCTACCTACGCGACTGCCCCTCGAGAATGTATGTATGTGTATGTAAGTATGTTGTACTATACGGATTACGCTTCGATAAAGCTCTTTTCGTGTTGCTGTTGTTTACCAACATTGTATATGTCCGGTTGCTTTAATGTCTATTCTTTCCTTCGCCTCCAATAACAAATATGGCTTGAGCTTTTGTTTCAATTCTATTAGAATTATGCCTCAATTGTATATATCGTGACAGGTCTATCCAAAAGGTTAAGGGTTGGAATGAATTCGGA

mRNA sequence

GTGGGTTCTAGTCCTCATCTTTCAATGGTAGAATTAAAAAAAAAGTTTTTTTTAGGTTTTTTTTTTGGGAGAGAGAAAGAAAAAAAGAGTTGAAGTTTGAAGAAGCGGATAGGAAGGCTCGGCCTTGGGTTGCGAGAGAGAATTTATTTTTGTTTACTTTTTTATTTTTTTTATTATTTATTTCTTTTCTTTTCTTTCATCGTTTTGTTTTGTTGGTTGAATTCTTTATCTCTCTCTCTCTCTCTCTCTTTTTGCGCTCAAAATTCGCCCAGATTCGCCGATTTCTATCGGAACAATCGCACGGTTTCTGCAAAATTCCTCAACCAGATTCGGTTTCGCCTCATTCGATTTGGTTTTCAGAAAAATAGAATAGTGGAAACTGTGGTTTCTTGCGGGGAGGAAAACGGATATCGTACAAAGGGGAAAGGGTAAAAAGAACTGCGGGTTGAGGATGGACACGGCGAATGCAACAAGTTATTGGTGTCATATGTGTTCTCAAACAGTGAATCCCATCATTGATGTCGAAATTAAATGCCCCTTCTGTCGTAGTGGGTTTGTTGAAGAGATGGTTAATGGCAGCAGCGGTGTTTCCAGTGACAATAATGAGCTTGAATCTGAGTTTGGATCGGAGCGAGCTTTGTCCCTTTGGGCCCCGATCTTGCTTGGTATGATGGGAAATCCCCGTGGGCGGCGTAGATTCAGGCATCTTGAGTTTGATGAGGACGATGATGATAATGACAATGGTGATGGGGAAGGGCACCGTTTGACTGAGCCTACCGAGTTGGATCGAGAGCTTGATTCAGTCATTAGGAGGAGGAGAAATTCAGCTACCATTCTACAGTTGCTTCAAGATATCAGAGCTGGAATGACAACTGAATCGGAGAATTATGAGGGAGAGAGGAACCGAGAGCGGGATCGAGATCAAGAGCGGGTTATTCTCATAAATCCTCTCAATCAAACCATTGTAGTTCAAGGAGCTGGTCAAACTGAGAATCAAAATCACTCTATTGGGTCATTGGGTGATTATTTCGTTGGACCTGGCTTGGATTTGTTATTGCAACATCTAGCTGAGAATGATCCTAATAGATATGGTACTCCACCAGCACAGAAGGAGGCGGTCGATGCGCTGCCCGTGGTGAGAGTTAAGGGTGGTTTGCAATGTTCAGTGTGTTTGGATGATTTTGAGGTTGATGCAGAAGCCAAAGAGATGCCATGTAAGCATAAATTTCACACTGGCTGTATTCTGCCATGGCTTGAGCTGCATAGTTCTTGCCCAGTTTGTAGGCATCAATTGCCTGCCGATGAATCGAAGCGAGACGTTGATGGTGGTGAATCTGGTAGGTTCATGGGTGACCTTAATGTAAATGTTAATGGTGGGGAGGTTGAGGACGAGAGAAACAATGCTTCCGGGCGGAGGTTTTCGTTTCCATGGCCATTCAATGGCTTGTTTTCAGCACAAGGTGGAGCTGGGAACTTTTCTGGAGGAAGTACAAGTGATTCTCAAAGGGATGAGAGTTCCATTTGAGTTATCATCATATGAAGAACCTGTTTGATATTGATATTGAGATGGTGCTCCTGCTCTGTTTGCTGTATCAATTGTGTATGTTATTGTATGTATGTGTATGTACGTTTTTTTTTTATTTTTTATAACTAGGAATCGAAGCTTTGTTCCTCTACATGTTCAGGGGCACCCACTTCCATCCTAAATTTGGGTCCGAGAGACTACAAGAAATTTTACAATTAAGTTCATTCGTGAGTTTCAACCAATGACTTTCAAGAGAACATGTTTTGAAGACCCCAAACCAAACATCTACCTACGCGACTGCCCCTCGAGAATGTATGTATGTGTATGTAAGTATGTTGTACTATACGGATTACGCTTCGATAAAGCTCTTTTCGTGTTGCTGTTGTTTACCAACATTGTATATGTCCGGTTGCTTTAATGTCTATTCTTTCCTTCGCCTCCAATAACAAATATGGCTTGAGCTTTTGTTTCAATTCTATTAGAATTATGCCTCAATTGTATATATCGTGACAGGTCTATCCAAAAGGTTAAGGGTTGGAATGAATTCGGA

Coding sequence (CDS)

ATGGACACGGCGAATGCAACAAGTTATTGGTGTCATATGTGTTCTCAAACAGTGAATCCCATCATTGATGTCGAAATTAAATGCCCCTTCTGTCGTAGTGGGTTTGTTGAAGAGATGGTTAATGGCAGCAGCGGTGTTTCCAGTGACAATAATGAGCTTGAATCTGAGTTTGGATCGGAGCGAGCTTTGTCCCTTTGGGCCCCGATCTTGCTTGGTATGATGGGAAATCCCCGTGGGCGGCGTAGATTCAGGCATCTTGAGTTTGATGAGGACGATGATGATAATGACAATGGTGATGGGGAAGGGCACCGTTTGACTGAGCCTACCGAGTTGGATCGAGAGCTTGATTCAGTCATTAGGAGGAGGAGAAATTCAGCTACCATTCTACAGTTGCTTCAAGATATCAGAGCTGGAATGACAACTGAATCGGAGAATTATGAGGGAGAGAGGAACCGAGAGCGGGATCGAGATCAAGAGCGGGTTATTCTCATAAATCCTCTCAATCAAACCATTGTAGTTCAAGGAGCTGGTCAAACTGAGAATCAAAATCACTCTATTGGGTCATTGGGTGATTATTTCGTTGGACCTGGCTTGGATTTGTTATTGCAACATCTAGCTGAGAATGATCCTAATAGATATGGTACTCCACCAGCACAGAAGGAGGCGGTCGATGCGCTGCCCGTGGTGAGAGTTAAGGGTGGTTTGCAATGTTCAGTGTGTTTGGATGATTTTGAGGTTGATGCAGAAGCCAAAGAGATGCCATGTAAGCATAAATTTCACACTGGCTGTATTCTGCCATGGCTTGAGCTGCATAGTTCTTGCCCAGTTTGTAGGCATCAATTGCCTGCCGATGAATCGAAGCGAGACGTTGATGGTGGTGAATCTGGTAGGTTCATGGGTGACCTTAATGTAAATGTTAATGGTGGGGAGGTTGAGGACGAGAGAAACAATGCTTCCGGGCGGAGGTTTTCGTTTCCATGGCCATTCAATGGCTTGTTTTCAGCACAAGGTGGAGCTGGGAACTTTTCTGGAGGAAGTACAAGTGATTCTCAAAGGGATGAGAGTTCCATTTGA

Protein sequence

MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIRRRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQGAGQTENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGLQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFMGDLNVNVNGGEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESSI

Homology

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BLAST of Sed0024247 vs. NCBI nr
Match: XP_022996432.1 (E3 ubiquitin-protein ligase SIRP1-like [Cucurbita maxima] >XP_022996433.1 E3 ubiquitin-protein ligase SIRP1-like [Cucurbita maxima])

HSP 1 Score: 622.1 bits (1603), Expect = 3.0e-174
Identity = 312/361 (86.43%), Postives = 324/361 (89.75%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           MD + AT YWCHMCSQ VNPIIDVEIKCPFCRSGFVEEM NG   +S DNNELES+FGSE
Sbjct: 1   MDESIATRYWCHMCSQMVNPIIDVEIKCPFCRSGFVEEMNNGD--ISRDNNELESDFGSE 60

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIR 120
           RALSLWAPILLGMMGNPRGRRRFRHLEFDEDD DNDN +GEGHRLTEPT+LDRELDSV+R
Sbjct: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDGDNDNDEGEGHRLTEPTDLDRELDSVMR 120

Query: 121 RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQ-GAGQT 180
           RRR+SATILQLLQ IRAGM TESEN+E ERNRER    ERVILINP NQTIVVQ G GQT
Sbjct: 121 RRRSSATILQLLQGIRAGMATESENFERERNRER----ERVILINPFNQTIVVQGGGGQT 180

Query: 181 ENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGLQCSV 240
           ENQNH IGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPA KEAVDALP VRVK  LQCSV
Sbjct: 181 ENQNHPIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAHKEAVDALPTVRVKDNLQCSV 240

Query: 241 CLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFM 300
           CLDDFEVDAEAKEMPC+HKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGG S RFM
Sbjct: 241 CLDDFEVDAEAKEMPCRHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGGSTRFM 300

Query: 301 GDLNVNVNG---GEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESS 358
           GDLNVN NG   GE+ED RNNAS  RFSFPWPFNGLFS+Q GAGN SGGSTSDSQRD+SS
Sbjct: 301 GDLNVNNNGGGFGEIEDGRNNASESRFSFPWPFNGLFSSQAGAGNSSGGSTSDSQRDDSS 355

[Close]

BLAST of Sed0024247 vs. NCBI nr
Match: KAG7035784.1 (E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 621.7 bits (1602), Expect = 3.9e-174
Identity = 311/361 (86.15%), Postives = 324/361 (89.75%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           MD + AT YWCHMCSQ VNPIIDVEIKCPFCRSGFVEEM NG   +S DNNELES+FGSE
Sbjct: 122 MDESIATRYWCHMCSQMVNPIIDVEIKCPFCRSGFVEEMNNGD--ISRDNNELESDFGSE 181

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIR 120
           RALSLWAPILLGMMGNPRGRRRFRHLEFDEDD DNDN +GEGHRLTEPT+LDRELDSV+R
Sbjct: 182 RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDGDNDNDEGEGHRLTEPTDLDRELDSVMR 241

Query: 121 RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQ-GAGQT 180
           RRR+SATILQLLQ IRAGM TESEN+E ERNRER    ERVILINP NQTIVVQ G GQT
Sbjct: 242 RRRSSATILQLLQGIRAGMATESENFERERNRER----ERVILINPFNQTIVVQGGGGQT 301

Query: 181 ENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGLQCSV 240
           ENQNH IGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPA KEAVDALP VRVK  LQCSV
Sbjct: 302 ENQNHPIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAHKEAVDALPTVRVKDNLQCSV 361

Query: 241 CLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFM 300
           CLDDFEVDAEAKEMPC+HKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGG S RFM
Sbjct: 362 CLDDFEVDAEAKEMPCRHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGGSTRFM 421

Query: 301 GDLNVNVNG---GEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESS 358
           GDLN+N NG   GE+ED RNNAS  RFSFPWPFNGLFS+Q GAGN SGGSTSDSQRD+SS
Sbjct: 422 GDLNINNNGGGFGEIEDGRNNASESRFSFPWPFNGLFSSQAGAGNSSGGSTSDSQRDDSS 476

[Close]

BLAST of Sed0024247 vs. NCBI nr
Match: XP_022958624.1 (E3 ubiquitin-protein ligase SIRP1-like [Cucurbita moschata] >XP_022958625.1 E3 ubiquitin-protein ligase SIRP1-like [Cucurbita moschata])

HSP 1 Score: 621.7 bits (1602), Expect = 3.9e-174
Identity = 311/361 (86.15%), Postives = 324/361 (89.75%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           MD + AT YWCHMCSQ VNPIIDVEIKCPFCRSGFVEEM NG   +S DNNELES+FGSE
Sbjct: 1   MDESIATRYWCHMCSQMVNPIIDVEIKCPFCRSGFVEEMNNGD--ISRDNNELESDFGSE 60

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIR 120
           RALSLWAPILLGMMGNPRGRRRFRHLEFDEDD DNDN +GEGHRLTEPT+LDRELDSV+R
Sbjct: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDGDNDNDEGEGHRLTEPTDLDRELDSVMR 120

Query: 121 RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQ-GAGQT 180
           RRR+SATILQLLQ IRAGM TESEN+E ERNRER    ERVILINP NQTIVVQ G GQT
Sbjct: 121 RRRSSATILQLLQGIRAGMATESENFERERNRER----ERVILINPFNQTIVVQGGGGQT 180

Query: 181 ENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGLQCSV 240
           ENQNH IGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPA KEAVDALP VRVK  LQCSV
Sbjct: 181 ENQNHPIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAHKEAVDALPTVRVKDNLQCSV 240

Query: 241 CLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFM 300
           CLDDFEVDAEAKEMPC+HKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGG S RFM
Sbjct: 241 CLDDFEVDAEAKEMPCRHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGGSTRFM 300

Query: 301 GDLNVNVNG---GEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESS 358
           GDLN+N NG   GE+ED RNNAS  RFSFPWPFNGLFS+Q GAGN SGGSTSDSQRD+SS
Sbjct: 301 GDLNINNNGGGFGEIEDGRNNASESRFSFPWPFNGLFSSQAGAGNSSGGSTSDSQRDDSS 355

[Close]

BLAST of Sed0024247 vs. NCBI nr
Match: KAG6605826.1 (E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 621.7 bits (1602), Expect = 3.9e-174
Identity = 311/361 (86.15%), Postives = 324/361 (89.75%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           MD + AT YWCHMCSQ VNPIIDVEIKCPFCRSGFVEEM NG   +S DNNELES+FGSE
Sbjct: 69  MDESIATRYWCHMCSQMVNPIIDVEIKCPFCRSGFVEEMNNGD--ISRDNNELESDFGSE 128

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIR 120
           RALSLWAPILLGMMGNPRGRRRFRHLEFDEDD DNDN +GEGHRLTEPT+LDRELDSV+R
Sbjct: 129 RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDGDNDNDEGEGHRLTEPTDLDRELDSVMR 188

Query: 121 RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQ-GAGQT 180
           RRR+SATILQLLQ IRAGM TESEN+E ERNRER    ERVILINP NQTIVVQ G GQT
Sbjct: 189 RRRSSATILQLLQGIRAGMATESENFERERNRER----ERVILINPFNQTIVVQGGGGQT 248

Query: 181 ENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGLQCSV 240
           ENQNH IGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPA KEAVDALP VRVK  LQCSV
Sbjct: 249 ENQNHPIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAHKEAVDALPTVRVKDNLQCSV 308

Query: 241 CLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFM 300
           CLDDFEVDAEAKEMPC+HKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGG S RFM
Sbjct: 309 CLDDFEVDAEAKEMPCRHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGGSTRFM 368

Query: 301 GDLNVNVNG---GEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESS 358
           GDLN+N NG   GE+ED RNNAS  RFSFPWPFNGLFS+Q GAGN SGGSTSDSQRD+SS
Sbjct: 369 GDLNINNNGGGFGEIEDGRNNASESRFSFPWPFNGLFSSQAGAGNSSGGSTSDSQRDDSS 423

[Close]

BLAST of Sed0024247 vs. NCBI nr
Match: XP_023534189.1 (E3 ubiquitin-protein ligase SIRP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620.2 bits (1598), Expect = 1.1e-173
Identity = 311/361 (86.15%), Postives = 324/361 (89.75%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           MD + AT YWCHMCSQ VNPIIDVEIKCPFCRSGFVEEM NG   VS DNNELES+FGSE
Sbjct: 1   MDESIATRYWCHMCSQMVNPIIDVEIKCPFCRSGFVEEMNNGD--VSRDNNELESDFGSE 60

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIR 120
           RALSLWAPILLGMMGNPRGRRRFRHLEFDEDD DNDN +GEGHRLTEPT+LDRELDSV+R
Sbjct: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDGDNDNDEGEGHRLTEPTDLDRELDSVMR 120

Query: 121 RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQ-GAGQT 180
           RRR+SATILQLLQ IRAGM TESEN+E ERNRER    ERVILINP NQTIVVQ G GQT
Sbjct: 121 RRRSSATILQLLQGIRAGMATESENFERERNRER----ERVILINPFNQTIVVQGGGGQT 180

Query: 181 ENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGLQCSV 240
           ENQNH IGSLGDYFVGPGLDLLLQHLAENDPNR+GTPPA KEAVDALP VRVK  LQCSV
Sbjct: 181 ENQNHPIGSLGDYFVGPGLDLLLQHLAENDPNRHGTPPAHKEAVDALPTVRVKDNLQCSV 240

Query: 241 CLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFM 300
           CLDDFEVDAEAKEMPC+HKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGG S RFM
Sbjct: 241 CLDDFEVDAEAKEMPCRHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGGSTRFM 300

Query: 301 GDLNVNVNG---GEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESS 358
           GDLN+N NG   GE+ED RNNAS  RFSFPWPFNGLFS+Q GAGN SGGSTSDSQRD+SS
Sbjct: 301 GDLNINNNGGGFGEIEDGRNNASESRFSFPWPFNGLFSSQAGAGNSSGGSTSDSQRDDSS 355

[Close]

BLAST of Sed0024247 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.0e-56
Identity = 142/376 (37.77%), Postives = 191/376 (50.80%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           M  A  T YWCH C Q +   +  EIKCP C  GFVEEM       + +  E  +    E
Sbjct: 1   MAEAAITRYWCHECEQAIEEAMVDEIKCPSCGGGFVEEM-------TDEEIERLTNRQPE 60

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIR 120
              S W PI               H     D DD DN            +L RE +  IR
Sbjct: 61  PGFSQWNPI--------------EHPGETMDSDDEDN------------DLGREFEGFIR 120

Query: 121 RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQGA---- 180
           R R ++T+ ++L  I   +               D++++  ILIN  NQ + +QG+    
Sbjct: 121 RHRRASTLRRVLDSIHDDLAD-------------DQERDSSILINAFNQALALQGSVLDP 180

Query: 181 ----GQTENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVK 240
               G      +  G L +Y +G GL LLLQHLAE+DP+R GTPPA+KEAV+ALP V+++
Sbjct: 181 DEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKIE 240

Query: 241 GGLQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDG 300
             + CSVCLDD EV ++AK+MPC+HKFH+ CILPWLELHSSCPVCR +LP++E+K     
Sbjct: 241 EVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETK----- 300

Query: 301 GESGRFMGDLNVNVNGGEVEDER-----------NNASGRRFSF-PWPFNGLFSAQGGAG 357
                   DLN   N G VED             + +S R ++  PW  N LFS +    
Sbjct: 301 --------DLNEPSNIGRVEDSHEEVRADGPGNVSESSNRPWAIVPW-LNELFSTREAQN 314

[Close]

BLAST of Sed0024247 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-40
Identity = 91/178 (51.12%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 188 SLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRV-KGGL-----QCSVCL 247
           ++GDYF+GPGL+ L+Q LAENDPNRYGTPPA K A++ALP+V + K  L     QC+VC+
Sbjct: 169 NIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCM 228

Query: 248 DDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADES--KRDVDG--GESGR 307
           DDFE   EAK+MPCKH +H  C+LPWLELH+SCPVCRH+LP D+   +R V G  G SG 
Sbjct: 229 DDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGG 288

Query: 308 FMGDLNVNVNGGEVEDERNNASGR--RFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRD 354
             GD     N G+  D  N    R  R S PWPF        G G   G +    Q D
Sbjct: 289 NDGD-----NSGQRSDGDNRTVERSFRISLPWPFQA-----RGPGPAPGDNAETRQED 336

[Close]

BLAST of Sed0024247 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-38
Identity = 84/170 (49.41%), Postives = 103/170 (60.59%), Query Frame = 0


Query: 183 NHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGL------Q 242
           N   G+ GDYF GPGL+ L+Q LAENDPNRYGTPPA K A+DALP V+V   +      Q
Sbjct: 156 NRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQ 215

Query: 243 CSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESG 302
           C+VC+D+FE  ++ K+MPCKH FH  C+LPWLELH+SCPVCR +LP D      D     
Sbjct: 216 CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD------DPDYEN 275

Query: 303 RFMGDLNVNVNGGEVEDERNNASGRRFS--FPWPFNGLFSAQGGAGNFSG 345
           R  G        G VE ++      RFS   PWPF      Q G+G+ SG
Sbjct: 276 RSQGSQGSGDGQGSVEGQQT----PRFSIQLPWPFR----RQDGSGSGSG 311

[Close]

BLAST of Sed0024247 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-25
Identity = 65/173 (37.57%), Postives = 90/173 (52.02%), Query Frame = 0


Query: 187 GSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRV------KGGLQCSVC 246
           G+ GDYF GPGL+ L + L+     R G PPA + A+DALP +++           C VC
Sbjct: 135 GNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVC 194

Query: 247 LDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFMG 306
            D+FE+ +EAK+MPC H +H+ CI+PWL  H+SCPVCR +LP+             R   
Sbjct: 195 KDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG----PSSSQNRTTP 254

Query: 307 DLNV-NVNGGEVEDERNNASGRR--FSFPWPFNGLFSAQGGAGNFSGGSTSDS 351
             N  + +     + R N + RR  FS  WPF    S+     N  G   SD+
Sbjct: 255 TRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRNSDT 302

[Close]

BLAST of Sed0024247 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.1e-25
Identity = 65/173 (37.57%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 190 GDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRV------KGGLQCSVCLDD 249
           GDYF GPGL+ L++ L+    +R G PPA K ++DALP +++           C VC D+
Sbjct: 134 GDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDE 193

Query: 250 FEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFMGDLN 309
           FE+ +EAK+MPC H +H+ CI+PWL  H+SCPVCR +LP+         G S       N
Sbjct: 194 FELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS--------RGSSSSTQSSQN 253

Query: 310 VNVNGGEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESS 357
            + NG E    RN      FS  WPF             S  S++ ++RD ++
Sbjct: 254 RSTNGRENSRRRN-----IFSNLWPFRS-----------SSSSSTQNRRDTNN 281

[Close]

BLAST of Sed0024247 vs. ExPASy TrEMBL
Match: A0A6J1KAR4 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491659 PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.5e-174
Identity = 312/361 (86.43%), Postives = 324/361 (89.75%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           MD + AT YWCHMCSQ VNPIIDVEIKCPFCRSGFVEEM NG   +S DNNELES+FGSE
Sbjct: 1   MDESIATRYWCHMCSQMVNPIIDVEIKCPFCRSGFVEEMNNGD--ISRDNNELESDFGSE 60

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIR 120
           RALSLWAPILLGMMGNPRGRRRFRHLEFDEDD DNDN +GEGHRLTEPT+LDRELDSV+R
Sbjct: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDGDNDNDEGEGHRLTEPTDLDRELDSVMR 120

Query: 121 RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQ-GAGQT 180
           RRR+SATILQLLQ IRAGM TESEN+E ERNRER    ERVILINP NQTIVVQ G GQT
Sbjct: 121 RRRSSATILQLLQGIRAGMATESENFERERNRER----ERVILINPFNQTIVVQGGGGQT 180

Query: 181 ENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGLQCSV 240
           ENQNH IGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPA KEAVDALP VRVK  LQCSV
Sbjct: 181 ENQNHPIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAHKEAVDALPTVRVKDNLQCSV 240

Query: 241 CLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFM 300
           CLDDFEVDAEAKEMPC+HKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGG S RFM
Sbjct: 241 CLDDFEVDAEAKEMPCRHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGGSTRFM 300

Query: 301 GDLNVNVNG---GEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESS 358
           GDLNVN NG   GE+ED RNNAS  RFSFPWPFNGLFS+Q GAGN SGGSTSDSQRD+SS
Sbjct: 301 GDLNVNNNGGGFGEIEDGRNNASESRFSFPWPFNGLFSSQAGAGNSSGGSTSDSQRDDSS 355

[Close]

BLAST of Sed0024247 vs. ExPASy TrEMBL
Match: A0A6J1H411 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111459795 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 1.9e-174
Identity = 311/361 (86.15%), Postives = 324/361 (89.75%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           MD + AT YWCHMCSQ VNPIIDVEIKCPFCRSGFVEEM NG   +S DNNELES+FGSE
Sbjct: 1   MDESIATRYWCHMCSQMVNPIIDVEIKCPFCRSGFVEEMNNGD--ISRDNNELESDFGSE 60

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDRELDSVIR 120
           RALSLWAPILLGMMGNPRGRRRFRHLEFDEDD DNDN +GEGHRLTEPT+LDRELDSV+R
Sbjct: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDGDNDNDEGEGHRLTEPTDLDRELDSVMR 120

Query: 121 RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQ-GAGQT 180
           RRR+SATILQLLQ IRAGM TESEN+E ERNRER    ERVILINP NQTIVVQ G GQT
Sbjct: 121 RRRSSATILQLLQGIRAGMATESENFERERNRER----ERVILINPFNQTIVVQGGGGQT 180

Query: 181 ENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGLQCSV 240
           ENQNH IGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPA KEAVDALP VRVK  LQCSV
Sbjct: 181 ENQNHPIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAHKEAVDALPTVRVKDNLQCSV 240

Query: 241 CLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGESGRFM 300
           CLDDFEVDAEAKEMPC+HKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGG S RFM
Sbjct: 241 CLDDFEVDAEAKEMPCRHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDGGGSTRFM 300

Query: 301 GDLNVNVNG---GEVEDERNNASGRRFSFPWPFNGLFSAQGGAGNFSGGSTSDSQRDESS 358
           GDLN+N NG   GE+ED RNNAS  RFSFPWPFNGLFS+Q GAGN SGGSTSDSQRD+SS
Sbjct: 301 GDLNINNNGGGFGEIEDGRNNASESRFSFPWPFNGLFSSQAGAGNSSGGSTSDSQRDDSS 355

[Close]

BLAST of Sed0024247 vs. ExPASy TrEMBL
Match: A0A6J1DLY0 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111021272 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.5e-155
Identity = 290/379 (76.52%), Postives = 319/379 (84.17%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           M+ +  T YWCHMCSQ VNPI DVEIKCPFCRSGFVEE+ N   G+SSDNNELES+FGSE
Sbjct: 1   MEESIPTRYWCHMCSQMVNPIFDVEIKCPFCRSGFVEEIGN---GISSDNNELESDFGSE 60

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHR---LTEPTELDRELDS 120
           RALSLWAPILLGMMGN RGRRR RHLEFDED+++N+N DGEGH     TE TELDRELDS
Sbjct: 61  RALSLWAPILLGMMGNSRGRRRMRHLEFDEDEEENENDDGEGHGHRVTTEATELDRELDS 120

Query: 121 VIRRRRNSATILQLLQDIRAGMTTESENYEGERN--RERDRDQERVILINPLNQTIVVQG 180
           +IRRRR+SATILQLLQ IRAGM TESENYEG+RN  RER+R++ERVILINP NQTIVVQG
Sbjct: 121 IIRRRRSSATILQLLQGIRAGMATESENYEGDRNRERERERERERVILINPFNQTIVVQG 180

Query: 181 AGQTENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGGL 240
            G T +QN  +GSLGDYFVGPGLDLLLQ+LAENDPNRYGTPPAQ+EAVDALP VRV+  L
Sbjct: 181 -GHTVDQN-PMGSLGDYFVGPGLDLLLQYLAENDPNRYGTPPAQREAVDALPTVRVEDSL 240

Query: 241 QCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDVDG--- 300
           QCSVCLDDFEV+AEAKEMPCKHKFHTGCI+PWLELHSSCPVCRHQLPADESKRD+DG   
Sbjct: 241 QCSVCLDDFEVNAEAKEMPCKHKFHTGCIMPWLELHSSCPVCRHQLPADESKRDMDGGSG 300

Query: 301 -GESGRFMGDLNVNVNG-GEVED--ERNNASGRRFSFPWPFNGLFSAQGGAG-------- 358
            G + RFMGDLNVN  G G++E   +  NASGRRF FPWPFNGLFS+QGG G        
Sbjct: 301 SGSAARFMGDLNVNGGGSGDIEAGVDGRNASGRRFPFPWPFNGLFSSQGGGGGGGGGGNS 360

[Close]

BLAST of Sed0024247 vs. ExPASy TrEMBL
Match: A0A1S3BNR7 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491641 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 6.2e-149
Identity = 284/378 (75.13%), Postives = 311/378 (82.28%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSD-------NNEL 60
           MD   AT YWCHMCSQ VNPI+DVEIKCPFCRSGFVEE+ NG S  ++D       NNEL
Sbjct: 1   MDELIATRYWCHMCSQMVNPIVDVEIKCPFCRSGFVEEIGNGISSDNNDNNNNNNNNNEL 60

Query: 61  ESEFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDR 120
           ES+FGSERALSLWAPILLGMMGNPRGRRRFRHLEFD+DDDDN++ DGEG+ ++  T    
Sbjct: 61  ESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDDDDDDNEHEDGEGNHVSSET---T 120

Query: 121 ELDSVIRRRRNSATILQLLQDIRAGM-TTESEN-YEGERNRERDRDQERVILINPLNQTI 180
           ELDSVIRRRR+SATILQLLQ IRAG+ T ESEN YEGER+RER    ERVILINP NQTI
Sbjct: 121 ELDSVIRRRRSSATILQLLQGIRAGIATAESENSYEGERSRER----ERVILINPFNQTI 180

Query: 181 VVQGAGQTENQNH-SIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVR 240
           VVQG G+ +NQNH SIGSLGDYFVGPGLDLLLQH+AENDPNRYGTPPAQKEAVDALP VR
Sbjct: 181 VVQG-GENQNQNHNSIGSLGDYFVGPGLDLLLQHIAENDPNRYGTPPAQKEAVDALPTVR 240

Query: 241 VK----GGLQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADES 300
           V+      LQCSVCLD+FEVD EAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLP DES
Sbjct: 241 VELEEDSRLQCSVCLDEFEVDEEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPGDES 300

Query: 301 KRDVDGGESGRFMGDLNVNVNG-------GEVEDERNNASGRRFSFPWPFNGLFSAQGGA 358
           KRDVDGG + RFM DLN N NG       GE+E+  ++ SGRRFSFPWPFNGLF++Q   
Sbjct: 301 KRDVDGGSAARFMSDLN-NGNGNGNGNGSGEIEERNSSESGRRFSFPWPFNGLFTSQ--- 360

[Close]

BLAST of Sed0024247 vs. ExPASy TrEMBL
Match: A0A5D3DDU3 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001160 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 6.2e-149
Identity = 284/378 (75.13%), Postives = 311/378 (82.28%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSD-------NNEL 60
           MD   AT YWCHMCSQ VNPI+DVEIKCPFCRSGFVEE+ NG S  ++D       NNEL
Sbjct: 1   MDELIATRYWCHMCSQMVNPIVDVEIKCPFCRSGFVEEIGNGISSDNNDNNNNNNNNNEL 60

Query: 61  ESEFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDNDNGDGEGHRLTEPTELDR 120
           ES+FGSERALSLWAPILLGMMGNPRGRRRFRHLEFD+DDDDN++ DGEG+ ++  T    
Sbjct: 61  ESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDDDDDDNEHEDGEGNHVSSET---T 120

Query: 121 ELDSVIRRRRNSATILQLLQDIRAGM-TTESEN-YEGERNRERDRDQERVILINPLNQTI 180
           ELDSVIRRRR+SATILQLLQ IRAG+ T ESEN YEGER+RER    ERVILINP NQTI
Sbjct: 121 ELDSVIRRRRSSATILQLLQGIRAGIATAESENSYEGERSRER----ERVILINPFNQTI 180

Query: 181 VVQGAGQTENQNH-SIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVR 240
           VVQG G+ +NQNH SIGSLGDYFVGPGLDLLLQH+AENDPNRYGTPPAQKEAVDALP VR
Sbjct: 181 VVQG-GENQNQNHNSIGSLGDYFVGPGLDLLLQHIAENDPNRYGTPPAQKEAVDALPTVR 240

Query: 241 VK----GGLQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADES 300
           V+      LQCSVCLD+FEVD EAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLP DES
Sbjct: 241 VELEEDSRLQCSVCLDEFEVDEEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPGDES 300

Query: 301 KRDVDGGESGRFMGDLNVNVNG-------GEVEDERNNASGRRFSFPWPFNGLFSAQGGA 358
           KRDVDGG + RFM DLN N NG       GE+E+  ++ SGRRFSFPWPFNGLF++Q   
Sbjct: 301 KRDVDGGSAARFMSDLN-NGNGNGNGNGSGEIEERNSSESGRRFSFPWPFNGLFTSQ--- 360

[Close]

BLAST of Sed0024247 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 381.7 bits (979), Expect = 6.4e-106
Identity = 214/395 (54.18%), Postives = 262/395 (66.33%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMV-NGSSGVS---SDNNELESE 60
           M+   A  YWCHMCSQ VNP+++ EIKCPFC+SGF+EEM  NG  G      D  + E++
Sbjct: 1   MEETMAARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNGGGGGGRGIRDVQDSETD 60

Query: 61  FGSERALSLWAPILLGMMGNPRGRRRFRHLEFDEDDDDN-----DNGDGEG--------- 120
           FG++RALSLWAPILLGMM +PR RRRFR  EF E++DDN      N DG G         
Sbjct: 61  FGTDRALSLWAPILLGMMSSPRRRRRFRRSEFGEENDDNGDDLTTNADGNGNDSNNSNNN 120

Query: 121 ----HRLTE---PTELDRELDSVI-RRRRNSATILQLLQDIRAGMTTESENYEGERNRER 180
               HR        +LDRE +S++ RRRR+S  ILQLLQ IRAG+ +E E+   + N + 
Sbjct: 121 VYRHHRARRHGGEIDLDREFESILRRRRRSSGNILQLLQGIRAGIASEYES--SDNNWDN 180

Query: 181 DRDQERVILINPLNQTIVVQGAGQTENQNH-SIGSLGDYFVGPGLDLLLQHLAENDPNRY 240
            R+++RVI+INP NQ++VV      +NQNH S+ SLGDYF+GPGLDLLLQHLAENDPNR 
Sbjct: 181 SRERDRVIMINPYNQSLVVP---SDQNQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQ 240

Query: 241 GTPPAQKEAVDALPVVRVKGGLQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSS 300
           GTPPA+KEAV+ALP V++   LQCSVCLDDFE   EAKEMPCKHKFH  CI+PWLELHSS
Sbjct: 241 GTPPARKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSS 300

Query: 301 CPVCRHQLPADESKRDVDGGESGRFMGDLNV--NVNGGEV----------EDERNNASGR 357
           CPVCR +LP+     D    +S R +   NV    NG  V          EDE  + +GR
Sbjct: 301 CPVCRFELPSSADDDDETKTDSERVLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGR 360

[Close]

BLAST of Sed0024247 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 2.0e-91
Identity = 188/365 (51.51%), Postives = 241/365 (66.03%), Query Frame = 0


Query: 9   YWCHMCSQTVNPIIDVEIKCPFCRSGFVEEM---VNGSSGVS-SDNNELESEFGSERALS 68
           YWCHMCSQ VNP+I  EIKCPFC+SGFVEEM   +NG S  S  +  + E +FG++RALS
Sbjct: 5   YWCHMCSQMVNPVIGAEIKCPFCQSGFVEEMSREINGGSSSSLREVQDPEIDFGTDRALS 64

Query: 69  LWAPILLGMMGNPRGRRRFRHLEFDEDDDD---------NDNGDGEGH--------RLTE 128
           LW PILLGMM NPR RRRFR  EF  D+D+         ND+ D + H        +   
Sbjct: 65  LWGPILLGMMSNPRRRRRFRRTEFGVDNDEVNVSDDVDGNDSVDIDRHHHRRHRHRQQGR 124

Query: 129 PTELDRELDSVI-RRRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINP 188
             +LDRE +S++ RRRR+SATILQLLQ IRAG+ +E E+         DRD         
Sbjct: 125 EIDLDREFESILRRRRRSSATILQLLQGIRAGIASEYES--------SDRDL-------- 184

Query: 189 LNQTIVVQGA-GQTENQNH-SIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVD 248
           LNQ+ VVQG+    +N+N+ S+ ++GDYFVG  LD LL+HLA+ND  R+G+ PA+KE VD
Sbjct: 185 LNQSAVVQGSTSLNQNRNNTSLSAIGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVD 244

Query: 249 ALPVVRVKGGLQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPAD 308
            LP V++   LQCS+CLDDF+  +EAKEMPCKHKFH  CI+PWLELHSSCPVCR++LP D
Sbjct: 245 NLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPD 304

Query: 309 ESKRDVDGGESGRFMGDLNVNVNGGEVEDE--RNNASGRRFSFPWPFNGLFSAQGGAGNF 348
           +  +        R    L +NV+   VED+   +N S RRFSFPWPF+GLFS+   +   
Sbjct: 305 DETKVNPVRPRTR---TLEINVSNENVEDDARNSNVSERRFSFPWPFSGLFSSSSSSSAS 350

[Close]

BLAST of Sed0024247 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 2.0e-91
Identity = 188/365 (51.51%), Postives = 241/365 (66.03%), Query Frame = 0


Query: 9   YWCHMCSQTVNPIIDVEIKCPFCRSGFVEEM---VNGSSGVS-SDNNELESEFGSERALS 68
           YWCHMCSQ VNP+I  EIKCPFC+SGFVEEM   +NG S  S  +  + E +FG++RALS
Sbjct: 5   YWCHMCSQMVNPVIGAEIKCPFCQSGFVEEMSREINGGSSSSLREVQDPEIDFGTDRALS 64

Query: 69  LWAPILLGMMGNPRGRRRFRHLEFDEDDDD---------NDNGDGEGH--------RLTE 128
           LW PILLGMM NPR RRRFR  EF  D+D+         ND+ D + H        +   
Sbjct: 65  LWGPILLGMMSNPRRRRRFRRTEFGVDNDEVNVSDDVDGNDSVDIDRHHHRRHRHRQQGR 124

Query: 129 PTELDRELDSVI-RRRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINP 188
             +LDRE +S++ RRRR+SATILQLLQ IRAG+ +E E+         DRD         
Sbjct: 125 EIDLDREFESILRRRRRSSATILQLLQGIRAGIASEYES--------SDRDL-------- 184

Query: 189 LNQTIVVQGA-GQTENQNH-SIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVD 248
           LNQ+ VVQG+    +N+N+ S+ ++GDYFVG  LD LL+HLA+ND  R+G+ PA+KE VD
Sbjct: 185 LNQSAVVQGSTSLNQNRNNTSLSAIGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVD 244

Query: 249 ALPVVRVKGGLQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPAD 308
            LP V++   LQCS+CLDDF+  +EAKEMPCKHKFH  CI+PWLELHSSCPVCR++LP D
Sbjct: 245 NLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPD 304

Query: 309 ESKRDVDGGESGRFMGDLNVNVNGGEVEDE--RNNASGRRFSFPWPFNGLFSAQGGAGNF 348
           +  +        R    L +NV+   VED+   +N S RRFSFPWPF+GLFS+   +   
Sbjct: 305 DETKVNPVRPRTR---TLEINVSNENVEDDARNSNVSERRFSFPWPFSGLFSSSSSSSAS 350

[Close]

BLAST of Sed0024247 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 325.1 bits (832), Expect = 7.1e-89
Identity = 180/360 (50.00%), Postives = 228/360 (63.33%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVEIKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGSE 60
           M+ A  T YWCHMCSQTVNP+++ EIKCPFC+SGFVEEM +     SSD  ++ +     
Sbjct: 1   MEEAVVTRYWCHMCSQTVNPVMEAEIKCPFCQSGFVEEMEDDDDHDSSDPADVRAN---- 60

Query: 61  RALSLWAPILLGMMGNPRGRRRFRHLEFDEDDD-----DNDNGDGEGHRLTEPTELDREL 120
              SLWAPIL+ +M +P  RRR + +E  ED+      +N+  DGE        +LD +L
Sbjct: 61  --NSLWAPILMELMNDPVRRRRNQSVESVEDNQNEVQTENNEDDGE-------NDLDWQL 120

Query: 121 DSVI-RRRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVVQ 180
             ++ RRRR+SA +LQLLQ IRAG++ ESE+     N     +  RVILIN  NQTI VQ
Sbjct: 121 QEILRRRRRHSAAVLQLLQGIRAGLSVESESTGNGGN-----NPGRVILINTSNQTITVQ 180

Query: 181 GAGQTENQNHSIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVDALPVVRVKGG 240
            +   ++     GSLGDYF+GPG ++LLQ LAENDPNRYGTPPA+KEAV+AL  V+++  
Sbjct: 181 NSADMDSV--PAGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEET 240

Query: 241 LQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPADESKRDV---- 300
           LQCSVCLDDFE+  EAK MPC HKFH+ C+LPWLELHSSCPVCR+QLPADE+K D     
Sbjct: 241 LQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTT 300

Query: 301 ---DGGESGRFMGDLNVNVNGG------------EVEDERNNASGRRFSFPWPFNGLFSA 336
              +G  S           + G            E E+E  N  G  FS PWPF+ LFS+
Sbjct: 301 SDNNGSSSASATTSHGAENSDGNRRQEEEEEEEEEEEEENENNDGSGFSIPWPFSTLFSS 340

[Close]

BLAST of Sed0024247 vs. TAIR 10
Match: AT3G13430.1 (RING/U-box superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-71
Identity = 157/334 (47.01%), Postives = 206/334 (61.68%), Query Frame = 0


Query: 1   MDTANATSYWCHMCSQTVNPIIDVE-IKCPFCRSGFVEEMVNGSSGVSSDNNELESEFGS 60
           M+ A+ TSYWCHMCS++V P+I  E IKC FC+SGFVEEM         DNN+       
Sbjct: 1   MEDASETSYWCHMCSRSVIPLIQDEIIKCNFCQSGFVEEM---------DNND-----DH 60

Query: 61  ERALSLWAPILLGMMGNPRGRRRFRHLEF-----DEDDDDNDNGDGEGHRLTEPTELDRE 120
           + A SLW PIL+ MM N   +      +      DED+D++D  DG+ +   E  ++  +
Sbjct: 61  QAADSLWTPILMEMMNNNHDQHSTNQEDSESILEDEDEDEDDGDDGDQNNDGE-IDITHQ 120

Query: 121 LDSVIR-RRRNSATILQLLQDIRAGMTTESENYEGERNRERDRDQERVILINPLNQTIVV 180
           L+ + R R R+S  I+ LLQ IRAG+  ESEN     N +   + E V+LIN  NQ I V
Sbjct: 121 LEEIRRIRTRHSTAIVNLLQGIRAGLLIESEN-----NEDNPDNSELVVLINSFNQRIRV 180

Query: 181 QGAGQTENQNHSIGSLGDYFVGPGLDLLLQHLAEND-PNRYGTPPAQKEAVDALPVVRVK 240
                 +  +   GSLGDYF+GPG + LLQ LAEND  NRYGTPPA KEAV+AL +V+++
Sbjct: 181 H-QDSVDTTSVPSGSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIE 240

Query: 241 GG-LQCSVCLDDFEVDAEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPA---DESKR 300
              LQCSVCLDDFE+  EAKEMPCKHKFH+ C+LPWLELHSSCPVCR+ LP    DE K 
Sbjct: 241 DSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDEPKT 300

Query: 301 DVD---GGESGRFMGDLNVNVNGGEVEDERNNAS 320
           D +     ++   + + ++  NG   +   NN+S
Sbjct: 301 DAETSRNDDNNEDISNASMASNGSSPDSSSNNSS 313

The following BLAST results are available for this feature:

BLAST of Sed0024247 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996432.1	3.0e-174	86.43	E3 ubiquitin-protein ligase SIRP1-like [Cucurbita maxima] >XP_022996433.1 E3 ubi...	[more]
KAG7035784.1	3.9e-174	86.15	E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022958624.1	3.9e-174	86.15	E3 ubiquitin-protein ligase SIRP1-like [Cucurbita moschata] >XP_022958625.1 E3 u...	[more]
KAG6605826.1	3.9e-174	86.15	E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023534189.1	1.1e-173	86.15	E3 ubiquitin-protein ligase SIRP1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0024247 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVN2	2.0e-56	37.77	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
P0CH30	1.6e-40	51.12	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	1.5e-38	49.41	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
O22197	1.4e-25	37.57	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	4.1e-25	37.57	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]

BLAST of Sed0024247 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAR4	1.5e-174	86.43	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491659 P...	[more]
A0A6J1H411	1.9e-174	86.15	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111459795...	[more]
A0A6J1DLY0	1.5e-155	76.52	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102127...	[more]
A0A1S3BNR7	6.2e-149	75.13	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491641 PE=4 ...	[more]
A0A5D3DDU3	6.2e-149	75.13	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Sed0024247 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56340.1	6.4e-106	54.18	RING/U-box superfamily protein	[more]
AT4G26400.2	2.0e-91	51.51	RING/U-box superfamily protein	[more]
AT4G26400.1	2.0e-91	51.51	RING/U-box superfamily protein	[more]
AT1G55530.1	7.1e-89	50.00	RING/U-box superfamily protein	[more]
AT3G13430.1	1.3e-71	47.01	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 237..277 e-value: 6.2E-8 score: 42.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 236..278 e-value: 7.8E-13 score: 48.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 237..278 score: 12.312242
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 204..284 e-value: 1.3E-19 score: 71.6
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 7..39 e-value: 5.8E-12 score: 45.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..357
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 3..297
None	No IPR available	PANTHER	PTHR15710:SF22	RING/U-BOX SUPERFAMILY PROTEIN	coord: 3..297
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 236..278 e-value: 1.69671E-22 score: 86.988
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 231..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024247.1	Sed0024247.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0061630	ubiquitin protein ligase activity