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Sed0024234 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATGAAGATTAAGATTGTTCTTGTGGCAGTAATGGCAATGATGCTGATTGCGACGTCGTTGGCCACATCCGTTATTGACGAGGACGACATGGTCGACCTCTACTCGGACGGTCGAGCTCAAGCGGGTCGAGGCATTACACTCCCAAGAAAGGTAATGAAAGAAAATGTTTATGAGGAAATGGGAGTGTTGTGTTTCTTAAGGTATTTGGATTGCAAACAAGACTCTGATTGCTCAGCTCCGTGTATTTGCCTTAAGAAAGGGATGTGTGGTTTGAAAGTTTAA ATGGAGATGAAGATTAAGATTGTTCTTGTGGCAGTAATGGCAATGATGCTGATTGCGACGTCGTTGGCCACATCCGTTATTGACGAGGACGACATGGTCGACCTCTACTCGGACGGTCGAGCTCAAGCGGGTCGAGGCATTACACTCCCAAGAAAGGTAATGAAAGAAAATGTTTATGAGGAAATGGGAGTGTTGTGTTTCTTAAGGTATTTGGATTGCAAACAAGACTCTGATTGCTCAGCTCCGTGTATTTGCCTTAAGAAAGGGATGTGTGGTTTGAAAGTTTAA ATGGAGATGAAGATTAAGATTGTTCTTGTGGCAGTAATGGCAATGATGCTGATTGCGACGTCGTTGGCCACATCCGTTATTGACGAGGACGACATGGTCGACCTCTACTCGGACGGTCGAGCTCAAGCGGGTCGAGGCATTACACTCCCAAGAAAGGTAATGAAAGAAAATGTTTATGAGGAAATGGGAGTGTTGTGTTTCTTAAGGTATTTGGATTGCAAACAAGACTCTGATTGCTCAGCTCCGTGTATTTGCCTTAAGAAAGGGATGTGTGGTTTGAAAGTTTAA MEMKIKIVLVAVMAMMLIATSLATSVIDEDDMVDLYSDGRAQAGRGITLPRKVMKENVYEEMGVLCFLRYLDCKQDSDCSAPCICLKKGMCGLKV Homology
BLAST of Sed0024234 vs. NCBI nr
Match: KAG6576919.1 (hypothetical protein SDJN03_24493, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Sed0024234 vs. NCBI nr
Match: KAG7014944.1 (hypothetical protein SDJN02_22575, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Sed0024234 vs. NCBI nr
Match: KAA0044339.1 (trypsin inhibitor 1-like [Cucumis melo var. makuwa] >TYK29468.1 trypsin inhibitor 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 8.4e-07 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Sed0024234 vs. ExPASy TrEMBL
Match: A0A5D3E148 (Trypsin inhibitor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00640 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.1e-07 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Sed0024234 vs. ExPASy TrEMBL
Match: A0A0A0KV23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000835 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.6e-06 Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of Sed0024234 vs. ExPASy TrEMBL
Match: A0A6J1E4H0 (probable polygalacturonase At3g15720 OS=Cucurbita moschata OX=3662 GN=LOC111430533 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 9.4e-04 Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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