Sed0024230 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAAGGGATTAAAAAAAAAAAAAAAAAATCTGGAACGATCTGAGAATTCAGAAACGAGATCATCAAATCCCGATCTCTTTCTTTTTCAAAATCTCCATCTCTACTATCTTCGATTCGATCGTTGCAGAGTGGAGATGCGGTTCTTGAAGAAGATTGCAGGAATTCTAGGGTTTTCCAAGGACGATGCTCACGACCTCAAGAACGAAGACGAAGATGTTGATTCCGATAATCAGGTTCCCGGTCCCGTCAATTTGCACGAAGCTGGTCCTCGGAGGGGTTTCAGTGTTCCTGTTCAGGTTGCCGTCAATCGCTCTCAACCCGGCCCTATTCTTGTTCCTTCTACTTCCGGCGATGGTGGAGTTCAGGTCCCTTCTATCTTCTGGATTGTTTGTCTTTTTCTGTGTGTTTTGTGAATGTTTTTGAGTTTAATGGTCTAAGTGACCGAGATTTGTTTCGGTTGGTTCCTTGAAAATCTGATTATTGTTTGGAGTTCATCACTATGAGTTTAGATTGTCTGCTGCTTAGTCTCCATTCCTTCCATTCCATGCCTCCTCGTGTCTGGCCTAGAGACGGGTGTGATTACTCCTATATAGTGGACTGAAGCTCCCATTCTCTGTTGCTTTTAATGGGATGTTTTTATTTATTTTGGAAAGTGGGATAACCGGGGCACTTCTGTCCCTTGGCCAGACAACCTGAGGTATTGAAGGAATGAAGACACTAACGTGTCTACAAATTAACTTCGTAGGTTAGTCTCAAAACTGTGATCTTGAACGTAGCATACCTACGAAGTCCAAACTTTTGATCACCGCGCCACCTTCTTTAGGGACGCTTTCAATTCGACGCTGATTATTGGATTTCCTGGTTTTTTTCTGTGGATGTGAATTGTATTTTCTTCTGAAAATTGGTTCGTGCTTTTTGTTGATGTTTGCTCAGGATATCTGTAGGCCATAATTTTTTTTTTCAGAATTGGTTTCTTTTGGCCTATAAGAATTAAGAAGTTTTTGCTCTCACAACCTCGTTCTTATAAATGCTTGTCAACTGTATTTAATCTTTGTTATTTTTCTTTTCCTACTGTTTTAAGTATCGATTTAACTAATTTCTGTCCGAATTGAAGTGAAGAAGAAGGAAAAACGATGCTAAACAATAAAAGCCAGTTTCTGATTTCAGATGTTGAAGTATGTAAACGGCTTTAATATTGTTGTCTTAGTAATGTAGATTCCGGTCAGCATTCTATGAATACAATGCTGATAAGATGTAAAAGCCTCAATAAAGGGTACATTACTCCTTCGATATCTTCGGTGCTTGGCCTAGGGACGGGCGTGGTTACCTTGTTTCAAAAAAAAAAAAATTGAACTAGGGAAGAGATTAGCGTAAGCAAATAACTCCAGTTTCCCTTTGGTTGATTCGTAGTCTCCTGTAATAGCGTGAGGTCAAATGGGCTGCATTAATGTAAATAGACGCCAAATCCTACTTGGTGACTTAGAAACCTAGTTATACTATCACTTCCTTAAATTGTTATACCCATATACTTATAGTGCTGAAGCTGGATGAAAAGCAAACTTTTTTTTTTATTGATAAGAAACATTAACTTCTAGTGATGAATGAAAAGTTAAAAAGAACTGTTCAATAGTAATTACAAAAAGCTTTTCCAATGGGACAACAGAGTAGTAAAGCTATAATCCTTAAAAAGGTTGTTTAATATATGCCCACGTAAGTACAAGAACCGTAATGGATTCGATGATGCAAGTTTTCTCTTGTTTCTTCTCATCAAAGAGCTCTGAGTTTCTTCTTTCTCCGTACAGTTCACCAAAAAGCAAAAATAAAGGATTTCCATAGGATCTATTTCTCTTCTTTGAATAGATGACCTGTAATAGCATAGAGAATGATATCTTGAATATTGCCGGGCCTAGTCATCTCCCAATTTAAAGCCTTGAGAAGATAATCCCACATACAGTTCGCCATCTTACACTGACTAAGAAGATGATAAGGATTGTCATGGCTATCAAGGCAAAGGTAACAGAAATTGGGGGAGATAGCAAGACGAGGAGCCTAATTTGAAGCATGTCATTTGTGTTAAGCACACAGGGGCTAAGTTCCCTTGTAAAGAATTTAATCCTTTTCTGTTGAGGCCCTTTCCAAATTTTAGAATAGTAAACATAAACCATAGCCAAACAAAATGATTTCTGGAGTAGATCCTAACTTTTGATGGAAACGTAAGGTTTAGGCTATTTCTTCTATATTCACCATAGTGATCTGCCAATTGAAATCATAATCTGATCCATCTGTATCATCATATGCACACCCTACTTGTCATGTTTTCAGGAGGGGTCTCTGGGAATTTGCCAGTACAAAAAGTAGGGTACTGAGAAATCTCATTTTAATGCGATCTCAACTCTGCTTCGTTTAGCTAGTACGAATTTCACTGCCTTCGTGATGGGTGATCTCAAGTCATCACATTGTTTCTAATATTTGCAAGTTCTCTTTCCCTTGTAATTCTGGTCCTAGGACTTGTTGTGATCGCTTTTGTCTTTTGTTAAGATTGCAACTTTGTTAATTTTTGGTATATTTTCCCATATTCAGGGTTTGACATGGTATGCCAAGTGTCTCCGAGTTGATGAAGATGGAGATGTAGCTGAGCAGTTCCTCGACGAGGTCTTACACGAGATGCCAACCAGTACTACAGACCATCAGAAAGCATATCCACGATATCAGATAAATAATAGAAATAGACCAGCTAAAGTAAAAACCCAGGTTATCTTGCAGGAGGGTAAACTACAACATTGTATTCAACATCAAGGTAGATTTCTACTGGTATGAAGAAAAAATAAAAATAAAACATGAGAAATGAATAGTTATTTATGAGGATGATCTGTCTCATTTTGATGACAAAAAAACTTCCCTTAAAGTACAGAAGCTTGGATAAACTACATGAAGGGATCTACATAAGAAGCTTTGGTAACAACAGGGTTCTTTCTCAAGTGTTATAATTGTATTGCTGACCATTGAACATATGTTGTGATGCCCTACAGATGGAGATAATTGGAATACAGAAATGGGCTCTAACTCATTCACTAACCATTTGAATGTCAAACTTGAAGGTGCTGTTTAATCTTCTCACTCTTCTCTTCTTTTTTCACTTGTGGTGATAGGGTTTTTGCTTTTAGGTGTATGAGCTGAGTGATTGGGATTTGCTTAGTATAGTCAGGAAAGATGAAGTGTGAATCTATGGATGTGAAAATAAACTTAAAATGCACCAGTGTGTTCATGATGTTTGTGTTAAACCATTTTGAGTTAATTATTTGATTAGACTTTTTTGTGTGTTTTGTTA GAAAAAAGGGATTAAAAAAAAAAAAAAAAAATCTGGAACGATCTGAGAATTCAGAAACGAGATCATCAAATCCCGATCTCTTTCTTTTTCAAAATCTCCATCTCTACTATCTTCGATTCGATCGTTGCAGAGTGGAGATGCGGTTCTTGAAGAAGATTGCAGGAATTCTAGGGTTTTCCAAGGACGATGCTCACGACCTCAAGAACGAAGACGAAGATGTTGATTCCGATAATCAGGTTCCCGGTCCCGTCAATTTGCACGAAGCTGGTCCTCGGAGGGGTTTCAGTGTTCCTGTTCAGGTTGCCGTCAATCGCTCTCAACCCGGCCCTATTCTTGTTCCTTCTACTTCCGGCGATGGTGGAGTTCAGGGTTTGACATGGTATGCCAAGTGTCTCCGAGTTGATGAAGATGGAGATGTAGCTGAGCAGTTCCTCGACGAGGTCTTACACGAGATGCCAACCAGTACTACAGACCATCAGAAAGCATATCCACGATATCAGATAAATAATAGAAATAGACCAGCTAAAGTAAAAACCCAGGTTATCTTGCAGGAGGGTAAACTACAACATTGTATTCAACATCAAGGTAGATTTCTACTGGTATGAAGAAAAAATAAAAATAAAACATGAGAAATGAATAGTTATTTATGAGGATGATCTGTCTCATTTTGATGACAAAAAAACTTCCCTTAAAGTACAGAAGCTTGGATAAACTACATGAAGGGATCTACATAAGAAGCTTTGGTAACAACAGGGTTCTTTCTCAAGTGTTATAATTGTATTGCTGACCATTGAACATATGTTGTGATGCCCTACAGATGGAGATAATTGGAATACAGAAATGGGCTCTAACTCATTCACTAACCATTTGAATGTCAAACTTGAAGGTGCTGTTTAATCTTCTCACTCTTCTCTTCTTTTTTCACTTGTGGTGATAGGGTTTTTGCTTTTAGGTGTATGAGCTGAGTGATTGGGATTTGCTTAGTATAGTCAGGAAAGATGAAGTGTGAATCTATGGATGTGAAAATAAACTTAAAATGCACCAGTGTGTTCATGATGTTTGTGTTAAACCATTTTGAGTTAATTATTTGATTAGACTTTTTTGTGTGTTTTGTTA ATGCGGTTCTTGAAGAAGATTGCAGGAATTCTAGGGTTTTCCAAGGACGATGCTCACGACCTCAAGAACGAAGACGAAGATGTTGATTCCGATAATCAGGTTCCCGGTCCCGTCAATTTGCACGAAGCTGGTCCTCGGAGGGGTTTCAGTGTTCCTGTTCAGGTTGCCGTCAATCGCTCTCAACCCGGCCCTATTCTTGTTCCTTCTACTTCCGGCGATGGTGGAGTTCAGGGTTTGACATGGTATGCCAAGTGTCTCCGAGTTGATGAAGATGGAGATGTAGCTGAGCAGTTCCTCGACGAGGTCTTACACGAGATGCCAACCAGTACTACAGACCATCAGAAAGCATATCCACGATATCAGATAAATAATAGAAATAGACCAGCTAAAGTAAAAACCCAGGTTATCTTGCAGGAGGGTAAACTACAACATTGTATTCAACATCAAGGTAGATTTCTACTGGTATGA MRFLKKIAGILGFSKDDAHDLKNEDEDVDSDNQVPGPVNLHEAGPRRGFSVPVQVAVNRSQPGPILVPSTSGDGGVQGLTWYAKCLRVDEDGDVAEQFLDEVLHEMPTSTTDHQKAYPRYQINNRNRPAKVKTQVILQEGKLQHCIQHQGRFLLV Homology
BLAST of Sed0024230 vs. NCBI nr
Match: XP_023533597.1 (uncharacterized protein LOC111795416 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255.0 bits (650), Expect = 4.2e-64 Identity = 128/156 (82.05%), Postives = 138/156 (88.46%), Query Frame = 0
BLAST of Sed0024230 vs. NCBI nr
Match: XP_022996143.1 (uncharacterized protein LOC111491455 [Cucurbita maxima]) HSP 1 Score: 252.7 bits (644), Expect = 2.1e-63 Identity = 127/156 (81.41%), Postives = 137/156 (87.82%), Query Frame = 0
BLAST of Sed0024230 vs. NCBI nr
Match: XP_022930967.1 (uncharacterized protein LOC111437301 [Cucurbita moschata] >KAG7036184.1 hypothetical protein SDJN02_02985, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 252.3 bits (643), Expect = 2.7e-63 Identity = 127/156 (81.41%), Postives = 137/156 (87.82%), Query Frame = 0
BLAST of Sed0024230 vs. NCBI nr
Match: XP_022155947.1 (uncharacterized protein LOC111022940 [Momordica charantia]) HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62 Identity = 122/152 (80.26%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of Sed0024230 vs. NCBI nr
Match: XP_038886945.1 (uncharacterized protein LOC120077122 [Benincasa hispida]) HSP 1 Score: 249.6 bits (636), Expect = 1.8e-62 Identity = 122/156 (78.21%), Postives = 138/156 (88.46%), Query Frame = 0
BLAST of Sed0024230 vs. ExPASy TrEMBL
Match: A0A6J1KA07 (uncharacterized protein LOC111491455 OS=Cucurbita maxima OX=3661 GN=LOC111491455 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63 Identity = 127/156 (81.41%), Postives = 137/156 (87.82%), Query Frame = 0
BLAST of Sed0024230 vs. ExPASy TrEMBL
Match: A0A6J1ES60 (uncharacterized protein LOC111437301 OS=Cucurbita moschata OX=3662 GN=LOC111437301 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.3e-63 Identity = 127/156 (81.41%), Postives = 137/156 (87.82%), Query Frame = 0
BLAST of Sed0024230 vs. ExPASy TrEMBL
Match: A0A6J1DQR1 (uncharacterized protein LOC111022940 OS=Momordica charantia OX=3673 GN=LOC111022940 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 6.5e-63 Identity = 122/152 (80.26%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of Sed0024230 vs. ExPASy TrEMBL
Match: A0A1S3CRI6 (uncharacterized protein LOC103503527 OS=Cucumis melo OX=3656 GN=LOC103503527 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 4.2e-62 Identity = 120/156 (76.92%), Postives = 137/156 (87.82%), Query Frame = 0
BLAST of Sed0024230 vs. ExPASy TrEMBL
Match: A0A0A0LF42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902940 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 8.0e-61 Identity = 118/156 (75.64%), Postives = 136/156 (87.18%), Query Frame = 0
BLAST of Sed0024230 vs. TAIR 10
Match: AT4G17960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 150.2 bits (378), Expect = 1.4e-36 Identity = 79/158 (50.00%), Postives = 103/158 (65.19%), Query Frame = 0
BLAST of Sed0024230 vs. TAIR 10
Match: AT5G46620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 109.0 bits (271), Expect = 3.5e-24 Identity = 69/158 (43.67%), Postives = 87/158 (55.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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