Sed0024225 (gene) Chayote v1

Overview


Name	Sed0024225
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin-conjugating enzyme
Location	LG06: 40346524 .. 40350762 (-)
RNA-Seq Expression	Sed0024225
Synteny	Sed0024225

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGATTTCGATCATCTTCATTCTTTGTGTTTTGATCTTATTTGGTCGTTTTTGTTCATTTTCGCTCCGATTCGTGTATCGCTGTGGTGTTTCTGGCCTTTGATGTGCGTGTGCTCATCCTGAGTTGTTGGATTTCATGCTTGTTCGCCCTAATTTGTTTACGATTTTGATGGCTGTTTCGGACTGAGATGTAGGGATTTTGATAACGGTGAGGGTTTGGGAAAGGATTTTTCGACGTCCAACGAGCTGGTGTTTTAGATTCGTTTAGGGTACAGGTTTACTGTACTTTGTAGTTAATTTGTACCCCGTGAGGTGGCGCGGCGGTGGTTGAAGGCTTGGGCATGAGCTTTGAAGGCGTAGTTTTTAGACATTTCCTATGTCTCCATTCCTTCGATGTCTTATAGTCCTTCGCCTAAGGATGAGCCTGCTTACCCTGGCTATCAGTATAACTTCGATTTCCCAATTTTCAAAAAAAAAAATAGTCCGTAATATCCGGAAAATCGTAGCTTCGCCCCACTATATGCAGGTAATCATGCCTCTCTCTACGCCAGACACCGGGAGACATTCAAGGAATAGAGACACAGGAGGTGTCTAAATTAATTAATGTCATAAGTGAGTATTGTACTTGAGACTTTGTCGAAGCCTTTGACTCCTGCGTGATGCCACTGTTTTTGAACTAAAAAGTAGCTCGTGTTTAATTTTCTGGATTGATTTATGTGACTAAGGATGTTTGACTTAAATGGTATTACCTCCTTTGGCCTTTTGGTGTTCATGTTGATGTAAGCTCTAGAATTTTGTTTCAAATTTGCAATTTTATTTTACCTAAAGAAACGCTCTTGAATTGGTCCATTTTTCTTTTCCGTTTTGGTGTATTATGGAAGATAGAGGTGCCTTCTTTTAATTTGATCGAACTTGTTTCATGTTGTTTATCGAACTTTCACTTGATTGAATTTTGGTCTTTTGTGTTTTTCTTCAATGATACTTTTTCATGTTCGATCATTTTTTCTGCATCTGTCATGTGCGTTTATAAATTGTGATGTTAAGATTGTTGTCTTGATTTATTTCAGCCGGTGAGGATGTCTACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAAGAGGTTGCAGCAGGATCCACCTGCTGGCATCAGTGGTGCTCCCCAAGAAAATAATATTATGCTATGGAATGCTGTTATATTTGGGTAATTTGGGAAAGTAAATTACGACCTCGATCGTTTTTCTTTTTAGAAATTAGAACTCATACATGCACGGTTGCTTGTTTGACTAACTGATGCTATGGTCTCTCATGTGGATTTTTTGTTGGCTTTTGCAGGCCTGATGATACTCCTTGGGATGGAGGTATTCTCAATTTATGCATTGCTTGACCAAAGTGACTTGTTAAGATGGCAACATCGTGTTAGAATCATGTTTCAGGCCCATTTAATAACCATTTTGTTGATGGGTTTTAGTTTTTTTAAATTATGCTTGTTTTCTCATTATTTTTTTTACGTCTTTCATATTTCTTAAGAAAACTTCTTAATTCTTACCCAAATCTTTAAACAAAAACAAGTTTTTGAAAACTATTTTTTTAGTTTTCACAAATTGGAAGTTGTGGGTGGTGGTGCCGTCGGCTAAATAGTGGGGCGAGGGGTGAAGCTCCTATTCTGCCGACATAAAAATAAAAAAAGTGTAAAAAGCTTCATCTTTGAAAATATATGTAAAAAGTAGATAATAAAAAAGAATAACTCATGATGCATTTCCACTGCAATAAAAATAACAGTATTTTCTCTTTTCTGTTGCATAGACATATGTGTTGGCTATATAGCCATTAGCTTAGTAAAGTTAAAAATTAATTTAACAATTTGAAATTATCTGGTTCTGATTTGCATGATTCTTTCATGGTCTTTTTAATCTCTTCCCGCTAGTTGGATTTGAGGAGATGTGTATTGTATTTTCTTGTGGAAAACTAAAAAATAGTTAGAACTTAAAATTCTGATTATGCTTCATCCAAAAAAATTCTGATTATGATTTCCTGAGACTTTAAATTTAAAATGTCAAGTTGCTTTCATCTCTCCTGGTGCCAGTTATGAGATTATAGTCGGGAGTATCCATGTATTCTGATGTTCTTTTCTAAACAGTGAAATGGATATTGCAATCTTATTTAATTTTCTGAAAAAAATCAATTAATTTTTCCTTTTATCTGATTTTGGTATTTTTCTAAAGTATTTTTATTTATGTACTTTTTACGTAGTTTATAAATTGTAATTTGGCTACTCATCTTTTGAGTTAACCAGGTACGTTTAAGCTGACCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCGACAGTCCGCTTTGTATCAAGAATGTTCCACCCAAATAGTAAGTTCACAATCTCAAGGAACACATGCCCTTTACAAACATTTTATGTTTCTGTGTGATTTATTCTGGGTCAATTTGATGGACCTTTTCCATCTTCATATGGCACTAGGTTATGAAGATGCATGGTTCTCCGGTAGTGTTGTTTGTTCAGCTATTTGTTTACACGGTGTTGCTTATGATGTTTCTGTATAGTTCTCATCTGATTTTCTACTTTTTGCTCATAAATGTAAAAAGCCATCTGATTTCTTACAGTGTTGCATATTATGTACCTGATATGCTATATTTGATATGTATGGTAAACGGCTTGGACCTGGGTGATTTATTGAGTGAAAGGTAAGAGAGAGAGAGAATATAACTGTCTAGTAAAAGTTAAACAATGAAATATATGTTTACCTTAGGTAGGTTCAAATGTAAGCTGTGCCAATTTTGCTTCTAATTTTTCTGTAAGTGATTTATTTTTTTAAAAAAATCTGTAACTGTTGCTAAGCCTACACTTCTTTTGCTTGTTTGGCTTTTCCTATCCTTCAGTTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCTATCTATGATGTAGCAGCTATACTCACCTCTATTCAGGTACTACCTAATAATTTGGCCTTAATAAATGTGATGACTGGAATTTTTTATTACTGTATGATTAATTGCTCCTTTTATCTTTTTATGGAATGAAAAGCATGTAATAATCATAAAAAGAAACATGTCACTGCTCATGTACTATTCCCTACCCTAGAAGTATTGTATATGTGTCTCCTGGATGCGTATCATAACATATTTATGGAGTTGGAGCAAGCGTTTAATTGTAAACCTGTCCTTGCCACTGACCCAGGCCGTATTGTTTTTATTTATTTTTTGGATAAGAAACCTTTCATTCATATATGAAATTACAATATAATATAGTCTATTACAAAATATATTGGGTCCAGAGATCAGATGATAGCTCTCCGATGATTAATAAGTACATCAAAACTATAATCATGAAAGAACTGGAATCATTTTGCTTGATAATCTGATTGGAGTTTGATCTACACAAGAAATTGTAGCCAGTGTCGTTAGTATGTAATATACACACACGTATATATATATATTTTTAATGATCAATAGCGATCACACCACAAGTATACTACTGTCCACCTAGAAAAGGGGAAAATGAAGGTAGGCATGGAAGTTATGAATTATCTGCTGACTTATTTAGGGTGCATCTGGAGCACTGGTTTGGTTAGTATAGACGGAAGGTTATGATAAACGGTGGGTTATTATAAACGGTGAGTTATTATAAATGGTGTTTGAGGGGCAAGTTATTATTACAGAGATTATGATAAACGATGTTTGAGGGGCTGGTTATGTAACAAAAAGTAATATATGTAATGTGTAGATAAACGGGCACGTAGGTTTAGATAAACGGGCACGCATGTTTAGGTAACCACTGTTTATAATAAACGGTGGGGCAAACATCGGTTGAGTTATTATAACCAACACGGCCATTTACATAAACTTGGCCCAAACACACCCTTAGTGTATTATAAATGTGATATTGTTGACTTTATTGTACTACTGACTCGTGGAATTCAAAATGTAACATGGCTTTCGTGTGCTTTACATCGATTTGCCAACTTATTTCTTTGTTGTTTTTATTGTTGTTTTTATACATATATATTCATTTTAATTCCGTTAACGTCTTTTCTTGTAGTCGCTGCTGTGCGACCCCAATCCAAACTCGCCTGCTAATTCTGAAGCTGCTAGGATGTTTAGCGAGAACAAGCGCGAGTACAACAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCCGATTAG

mRNA sequence

CGGATTTCGATCATCTTCATTCTTTGTGTTTTGATCTTATTTGGTCGTTTTTGTTCATTTTCGCTCCGATTCGTGTATCGCTGTGGTGTTTCTGGCCTTTGATGTGCGTGTGCTCATCCTGAGTTGTTGGATTTCATGCTTGTTCGCCCTAATTTGTTTACGATTTTGATGGCTGTTTCGGACTGAGATGTAGGGATTTTGATAACGGTGAGGGTTTGGGAAAGGATTTTTCGACGTCCAACGAGCTGGTGTTTTAGATTCGTTTAGGGTACAGGTTTACTGTACTTTGTAGTTAATTTGTACCCCGTGAGGTGGCGCGGCGGTGGTTGAAGGCTTGGGCATGAGCTTTGAAGGCGTAGTTTTTAGACATTTCCTATGTCTCCATTCCTTCGATGTCTTATAGTCCTTCGCCTAAGGATGAGCCTGCTTACCCTGGCTATCAGTATAACTTCGATTTCCCAATTTTCAAAAAAAAAAATAGTCCGTAATATCCGGAAAATCGTAGCTTCGCCCCACTATATGCAGGTAATCATGCCTCTCTCTACGCCAGACACCGGGAGACATTCAAGGAATAGAGACACAGGAGGTGTCTAAATTAATTAATGTCATAACCGGTGAGGATGTCTACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAAGAGGTTGCAGCAGGATCCACCTGCTGGCATCAGTGGTGCTCCCCAAGAAAATAATATTATGCTATGGAATGCTGTTATATTTGGGCCTGATGATACTCCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCGACAGTCCGCTTTGTATCAAGAATGTTCCACCCAAATATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCTATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGCTGCTGTGCGACCCCAATCCAAACTCGCCTGCTAATTCTGAAGCTGCTAGGATGTTTAGCGAGAACAAGCGCGAGTACAACAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCCGATTAG

Coding sequence (CDS)

ATGTCTACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAAGAGGTTGCAGCAGGATCCACCTGCTGGCATCAGTGGTGCTCCCCAAGAAAATAATATTATGCTATGGAATGCTGTTATATTTGGGCCTGATGATACTCCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACTGAGGATTATCCAAATAAGCCACCGACAGTCCGCTTTGTATCAAGAATGTTCCACCCAAATATTTATGCTGATGGAAGCATTTGTTTGGACATTCTGCAAAATCAGTGGAGCCCTATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGCTGCTGTGCGACCCCAATCCAAACTCGCCTGCTAATTCTGAAGCTGCTAGGATGTTTAGCGAGAACAAGCGCGAGTACAACAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCCGATTAG

Protein sequence

MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD

Homology

[Close]

BLAST of Sed0024225 vs. NCBI nr
Match: XP_039143317.1 (ubiquitin-conjugating enzyme E2 2 [Dioscorea cayenensis subsp. rotundata] >GAV76927.1 UQ_con domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 320.1 bits (819), Expect = 1.0e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. NCBI nr
Match: XP_012070398.1 (ubiquitin-conjugating enzyme E2 2 [Jatropha curcas] >KDP39659.1 hypothetical protein JCGZ_02679 [Jatropha curcas])

HSP 1 Score: 318.9 bits (816), Expect = 2.3e-83
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           M+TPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MTTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. NCBI nr
Match: KAF3966055.1 (hypothetical protein CMV_009812 [Castanea mollissima])

HSP 1 Score: 318.9 bits (816), Expect = 2.3e-83
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 38  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 97

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 98  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 157

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 158 PANSEAARMFSENKREYNRRVREIVEQSWTAD 189

[Close]

BLAST of Sed0024225 vs. NCBI nr
Match: KAA0034394.1 (ubiquitin-conjugating enzyme [Cucumis melo var. makuwa] >TYK15527.1 ubiquitin-conjugating enzyme [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.3e-83
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 5   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 64

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 65  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 124

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 125 PANSEAARMFSENKREYNRRVREIVEQSWTAD 156

[Close]

BLAST of Sed0024225 vs. NCBI nr
Match: XP_016736213.1 (ubiquitin-conjugating enzyme E2 2 [Gossypium hirsutum])

HSP 1 Score: 318.9 bits (816), Expect = 2.3e-83
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 27  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 86

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 87  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 146

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 147 PANSEAARMFSENKREYNRRVREIVEQSWTAD 178

[Close]

BLAST of Sed0024225 vs. ExPASy Swiss-Prot
Match: P42745 (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-84
Identity = 147/152 (96.71%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. ExPASy Swiss-Prot
Match: P35130 (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-84
Identity = 147/152 (96.71%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQ DPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. ExPASy Swiss-Prot
Match: P25866 (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 3.7e-84
Identity = 146/152 (96.05%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAP +NNI LWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARM+SENKREYNR+VRE+VEQSWTAD
Sbjct: 121 PANSEAARMYSENKREYNRKVREVVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. ExPASy Swiss-Prot
Match: P25865 (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 6.3e-84
Identity = 145/152 (95.39%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. ExPASy Swiss-Prot
Match: P42746 (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-75
Identity = 131/149 (87.92%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           M+TPA+KRLM DFKRLQ+DPP GISGAPQ+NNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSW 150
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

[Close]

BLAST of Sed0024225 vs. ExPASy TrEMBL
Match: A0A1Q3C9L9 (UQ_con domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20400 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.0e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. ExPASy TrEMBL
Match: A0A1U8NEE1 (ubiquitin-conjugating enzyme E2 2 OS=Gossypium hirsutum OX=3635 GN=LOC107946416 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-83
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. ExPASy TrEMBL
Match: A0A251PAM8 (UBC core domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_5G187900 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-83
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. ExPASy TrEMBL
Match: A0A5D2AA85 (UBC core domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A11G267400v1 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-83
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. ExPASy TrEMBL
Match: A0A6I9SPK9 (ubiquitin-conjugating enzyme E2 2 OS=Sesamum indicum OX=4182 GN=LOC105157023 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-83
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 )

HSP 1 Score: 313.5 bits (802), Expect = 9.1e-86
Identity = 147/152 (96.71%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 311.2 bits (796), Expect = 4.5e-85
Identity = 145/152 (95.39%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. TAIR 10
Match: AT1G14400.2 (ubiquitin carrier protein 1 )

HSP 1 Score: 311.2 bits (796), Expect = 4.5e-85
Identity = 145/152 (95.39%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           MSTPARKRLMRDFKRLQQDPPAGISGAPQ+NNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 153
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Sed0024225 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 )

HSP 1 Score: 282.3 bits (721), Expect = 2.2e-76
Identity = 131/149 (87.92%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
           M+TPA+KRLM DFKRLQ+DPP GISGAPQ+NNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 121 PANSEAARMFSENKREYNRRVREIVEQSW 150
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

[Close]

BLAST of Sed0024225 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 146.0 bits (367), Expect = 2.5e-35
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 5   ARKRLMRDFKRLQQDPPAGISGAPQENNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
           A KR++++ K LQ+DPP   S  P   ++  W A I GP D+P+ GG F +T+ F  DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61

Query: 65  NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
            KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 125 EAARMFSENKREYNRRVREIVEQSWT 151
           E A M+  +K +Y     E   ++WT
Sbjct: 122 EIAHMYKTDKNKY-----ESTARTWT 142

The following BLAST results are available for this feature:

BLAST of Sed0024225 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_039143317.1	1.0e-83	100.00	ubiquitin-conjugating enzyme E2 2 [Dioscorea cayenensis subsp. rotundata] >GAV76...	[more]
XP_012070398.1	2.3e-83	99.34	ubiquitin-conjugating enzyme E2 2 [Jatropha curcas] >KDP39659.1 hypothetical pro...	[more]
KAF3966055.1	2.3e-83	99.34	hypothetical protein CMV_009812 [Castanea mollissima]	[more]
KAA0034394.1	2.3e-83	99.34	ubiquitin-conjugating enzyme [Cucumis melo var. makuwa] >TYK15527.1 ubiquitin-co...	[more]
XP_016736213.1	2.3e-83	99.34	ubiquitin-conjugating enzyme E2 2 [Gossypium hirsutum]	[more]

BLAST of Sed0024225 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42745	1.3e-84	96.71	Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 S...	[more]
P35130	1.3e-84	96.71	Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa OX=3879 GN=UBC2 PE=2 SV=1	[more]
P25866	3.7e-84	96.05	Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1	[more]
P25865	6.3e-84	95.39	Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 S...	[more]
P42746	3.2e-75	87.92	Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana OX=3702 GN=UBC3 PE=2 S...	[more]

BLAST of Sed0024225 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1Q3C9L9	5.0e-84	100.00	UQ_con domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_2...	[more]
A0A1U8NEE1	1.1e-83	99.34	ubiquitin-conjugating enzyme E2 2 OS=Gossypium hirsutum OX=3635 GN=LOC107946416 ...	[more]
A0A251PAM8	1.1e-83	99.34	UBC core domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_5G187900 P...	[more]
A0A5D2AA85	1.1e-83	99.34	UBC core domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A11G2...	[more]
A0A6I9SPK9	1.1e-83	99.34	ubiquitin-conjugating enzyme E2 2 OS=Sesamum indicum OX=4182 GN=LOC105157023 PE=...	[more]

BLAST of Sed0024225 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02760.1	9.1e-86	96.71	ubiquiting-conjugating enzyme 2	[more]
AT1G14400.1	4.5e-85	95.39	ubiquitin carrier protein 1	[more]
AT1G14400.2	4.5e-85	95.39	ubiquitin carrier protein 1	[more]
AT5G62540.1	2.2e-76	87.92	ubiquitin-conjugating enzyme 3	[more]
AT4G27960.1	2.5e-35	45.89	ubiquitin conjugating enzyme 9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 7..150 e-value: 9.4E-69 score: 244.4
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 1..152
None	No IPR available	PANTHER	PTHR24067:SF319	UBIQUITIN-CONJUGATING ENZYME E2 2	coord: 1..152
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..148 e-value: 5.9E-68 score: 229.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..150
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 8..144 e-value: 1.4E-52 score: 177.1
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 4..150 score: 60.598225
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 7..145 e-value: 6.37649E-75 score: 218.226
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 77..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024225.1	Sed0024225.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0016574	histone ubiquitination
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity