Sed0024222 (gene) Chayote v1

Overview


Name	Sed0024222
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4
Location	LG08: 35831885 .. 35833376 (-)
RNA-Seq Expression	Sed0024222
Synteny	Sed0024222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCCCTCCTCATAGAATATGGAAGTTCACTGTCGATGGTTGTCCGAATCAGAGTGAAAGTGGGTCGGGTTAGATAGCTCGTGATTGTTTGGGAAGGCCAACTCTTGTAGGCTCAGAAGGGATTTGAAAGTGGCCTTAGAATTCGGGATGGTCTTATGCATATTCTAGAAAGTGTGTTGGATCCTATCCCTCTGTTAATCTCATTATAGCTGACATCCAAAGAATGATTCTTAGATTTATAAGCTGGCTAACCTCTACCCGCCTATGGCTATGGATTTCTTTTGAAACAAGGGTAATCATGTCCGTCCCTAGGTCAGTTACCAGAGACATCGAAGGAGTAATGTCACACGTAAGTCTCGAACTTAAGACCTTGAGAGCAGTATACCCCTAAAACCCAAATCTTCAATTACTGTGCCACTCCTTGTGGACGGCTATGTATTTCCTTTGAAGTAATATTTCTGGCCATCCTGAATTTTTTTTGGTGAGAGGGAATCTCTCCCACAAATGACCGAGGAACTACAATTTGGTGGTTCTTTAATGAAATGTTTGAAAAAAAAAGGTTGAAAGGTGAAGTCTTCCATCGAAAACCACAGAATCTAAACTCTTTTTTAATTGAAATACTGAAGTTGAATTGCATGATGAAGCAAATTGATTGAATTGACTTAACATAATAATAATAAAAAAAACTTAGTAGTATAATTTCTTCCAATCTGGTAAATCAGCAGTCAACAAAATGGGTTCACATTGCAGGGCAATCAATATCTCACTTTCCTAGAAAACGACTATGTAAATTGTAGGAAGTACCGTCACCTTAAGGGGAGACACCATTTGTTCATCCTCTGTTCTTCACGAAAATGAAAACTCCCATCCCTATCTTCTTCTTCTTCTTCTTCTTCACAATCCTCTGGTTCAATCTTCCGCCATGTTTCAGCGACGACGAATTCAGATCCTGCAATGTCAATTACAATTGCGGAGAGTTGGCAGACATCGGGTATCCATTTTGGGGAAACGAGAGGCACCGATTCTGCGGACGCCGAGAATTCGAACTCAACTGCAAAGACAACAAAACCACCACGATTGAAATCAGTTCTACGAAATTCAACGTTCTCAACATCAGCCAACCGGATCATAGAATGAGGATCGCGAGATCGGACCTGTTCGACGATTACTGCCCTAGAAATCCGATCGAAACCGCGACGCTGGATCGTCGTCTGTTCAATTACTCATCCAGCGATCTGAACATCTCCGTCTGGTACGATTGCACGCCGCAACAGGAAATTCTTGAGGATTTTAGGTTTTGGTGCGGATCGGTGGGGGGAGTGAATGGGAGTTTGAATTATGCTGTTGGGGAACATGAAATGGAGGCGAGGAATTTGAGTGTGAGTATAAATGGAGAGTGTAAATTGAAATTGGAAGTGACAGTTACGAAATGGGTAATGGAAGAAGAAGAAGAAAGGAACAGAACGGCTTGGTGGAGAAAGCTCTGA

mRNA sequence

ATGGATCCCCCTCCTCATAGAATATGGAAGTTCACTGTCGATGGTTGTCCGAATCAGAGTGAAAGTGGGTCGGACATCGGGTATCCATTTTGGGGAAACGAGAGGCACCGATTCTGCGGACGCCGAGAATTCGAACTCAACTGCAAAGACAACAAAACCACCACGATTGAAATCAGTTCTACGAAATTCAACGTTCTCAACATCAGCCAACCGGATCATAGAATGAGGATCGCGAGATCGGACCTGTTCGACGATTACTGCCCTAGAAATCCGATCGAAACCGCGACGCTGGATCGTCGTCTGTTCAATTACTCATCCAGCGATCTGAACATCTCCGTCTGGTACGATTGCACGCCGCAACAGGAAATTCTTGAGGATTTTAGGTTTTGGTGCGGATCGGTGGGGGGAGTGAATGGGAGTTTGAATTATGCTGTTGGGGAACATGAAATGGAGGCGAGGAATTTGAGTGTGAGTATAAATGGAGAGTGTAAATTGAAATTGGAAGTGACAGTTACGAAATGGGTAATGGAAGAAGAAGAAGAAAGGAACAGAACGGCTTGGTGGAGAAAGCTCTGA

Coding sequence (CDS)

ATGGATCCCCCTCCTCATAGAATATGGAAGTTCACTGTCGATGGTTGTCCGAATCAGAGTGAAAGTGGGTCGGACATCGGGTATCCATTTTGGGGAAACGAGAGGCACCGATTCTGCGGACGCCGAGAATTCGAACTCAACTGCAAAGACAACAAAACCACCACGATTGAAATCAGTTCTACGAAATTCAACGTTCTCAACATCAGCCAACCGGATCATAGAATGAGGATCGCGAGATCGGACCTGTTCGACGATTACTGCCCTAGAAATCCGATCGAAACCGCGACGCTGGATCGTCGTCTGTTCAATTACTCATCCAGCGATCTGAACATCTCCGTCTGGTACGATTGCACGCCGCAACAGGAAATTCTTGAGGATTTTAGGTTTTGGTGCGGATCGGTGGGGGGAGTGAATGGGAGTTTGAATTATGCTGTTGGGGAACATGAAATGGAGGCGAGGAATTTGAGTGTGAGTATAAATGGAGAGTGTAAATTGAAATTGGAAGTGACAGTTACGAAATGGGTAATGGAAGAAGAAGAAGAAAGGAACAGAACGGCTTGGTGGAGAAAGCTCTGA

Protein sequence

MDPPPHRIWKFTVDGCPNQSESGSDIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFDDYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYAVGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRTAWWRKL

Homology

[Close]

BLAST of Sed0024222 vs. NCBI nr
Match: XP_023001657.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111495731 [Cucurbita maxima])

HSP 1 Score: 194.9 bits (494), Expect = 6.4e-46
Identity = 99/161 (61.49%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGNER  FCGRREFELNCKDNKTTTIEISS +F+VLNIS+ +H M IARSDL  
Sbjct: 734 NIMYPFWGNERPEFCGRREFELNCKDNKTTTIEISSIEFHVLNISRSNHTMTIARSDLRT 793

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP+  I+T T+D RLF YS +DLN+SVWYDC     IL+++RF CGS G + G  NYA
Sbjct: 794 DYCPKIEIKTTTIDYRLFKYSLNDLNLSVWYDCPLLPGILDNYRFTCGSEGEIRGRANYA 853

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++G C+L +EVT+TK V  EE  +NRT
Sbjct: 854 ---FETEALNRSGNMSG-CRLNIEVTITKEVF-EETHKNRT 889

[Close]

BLAST of Sed0024222 vs. NCBI nr
Match: XP_038893810.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Benincasa hispida])

HSP 1 Score: 191.4 bits (485), Expect = 7.0e-45
Identity = 94/161 (58.39%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGN+R  FCGRREF LNCKDNKTTTI+I+S ++NV+ ISQ DHR+ IARSDLFD
Sbjct: 47  NISYPFWGNDRQDFCGRREFGLNCKDNKTTTIQINSMEYNVVKISQSDHRLTIARSDLFD 106

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP N I+TATLD   F YSS+DLN+SVWYDC P +  L DFRF CGS   + G  NYA
Sbjct: 107 DYCPNNQIKTATLDHSPFKYSSNDLNLSVWYDCPPLEGFLGDFRFSCGSEVEIIGRANYA 166

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
           +   +      ++S   +C+L +EVT+T  V+ +E E NRT
Sbjct: 167 LETKDAMYWRKNMS---DCELHIEVTITMEVL-KEGEMNRT 203

[Close]

BLAST of Sed0024222 vs. NCBI nr
Match: KAG6584346.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-44
Identity = 96/161 (59.63%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGNER  FCGRREFELNCKDNKTTT+EISS +F+VLNI + +H M IARSDL  
Sbjct: 46  NITYPFWGNERPEFCGRREFELNCKDNKTTTMEISSIEFHVLNIRRLNHTMTIARSDLRT 105

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           D+CP+  I+T T+D RLF Y+ +DLN+SVWYDC  Q  IL+++RF CGS G + G  NYA
Sbjct: 106 DFCPKIEIKTTTIDYRLFKYTLNDLNLSVWYDCPLQPGILDNYRFTCGSEGEIRGRANYA 165

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++ EC+L +EVT+TK V  EE  +NRT
Sbjct: 166 ---FETEALNRSGNMS-ECRLNIEVTITKEVF-EETHKNRT 201

[Close]

BLAST of Sed0024222 vs. NCBI nr
Match: XP_022923742.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isoform X2 [Cucurbita moschata])

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-44
Identity = 96/161 (59.63%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGNER  FCGRREFELNCKDN+TTT+EISS +F+VLNIS+  H M IARSDL  
Sbjct: 69  NITYPFWGNERPVFCGRREFELNCKDNRTTTMEISSIEFHVLNISRSKHTMTIARSDLRT 128

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP+   +T T+D RLF Y+ +DLN+SVWYDC  Q  IL+++RF CGS G + G  NYA
Sbjct: 129 DYCPKIETKTTTIDYRLFKYTLNDLNLSVWYDCPLQPGILDNYRFTCGSEGEIRGRANYA 188

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++ EC+L +EVT+TK V  EE  +NRT
Sbjct: 189 ---FETEALNRSRNMS-ECRLNIEVTITKEVF-EETHKNRT 224

[Close]

BLAST of Sed0024222 vs. NCBI nr
Match: XP_022923741.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isoform X1 [Cucurbita moschata])

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-44
Identity = 96/161 (59.63%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGNER  FCGRREFELNCKDN+TTT+EISS +F+VLNIS+  H M IARSDL  
Sbjct: 69  NITYPFWGNERPVFCGRREFELNCKDNRTTTMEISSIEFHVLNISRSKHTMTIARSDLRT 128

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP+   +T T+D RLF Y+ +DLN+SVWYDC  Q  IL+++RF CGS G + G  NYA
Sbjct: 129 DYCPKIETKTTTIDYRLFKYTLNDLNLSVWYDCPLQPGILDNYRFTCGSEGEIRGRANYA 188

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++ EC+L +EVT+TK V  EE  +NRT
Sbjct: 189 ---FETEALNRSRNMS-ECRLNIEVTITKEVF-EETHKNRT 224

[Close]

BLAST of Sed0024222 vs. ExPASy Swiss-Prot
Match: Q3ECH2 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.8 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.8 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.7e-14
Identity = 43/158 (27.22%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 28  YPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFDDYC 87
           +PFWG  RH+ CG    EL+C +N  T++ IS+ +F V  I+Q  + + +ARSDL   +C
Sbjct: 47  FPFWGGNRHKPCGHPLLELHCNNNNITSLYISNQEFYVRQINQTSNTLTLARSDLLGSFC 106

Query: 88  PRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILE----------------DFRFWC 147
                 T TL   +F  S +  +++V Y C P+                     D+++ C
Sbjct: 107 SSYAYNTTTLPPEIFELSPTYKSLTVLYHCDPKLSYRSSYTCPALGTFSMSQSVDYQYSC 166

Query: 148 GSVGGVNGSLNYAVGEHEMEARNLSVSINGECKLKLEV 170
            +   VN   ++   E  +   NL  ++    ++KL +
Sbjct: 167 QNSFTVNVPTSFHPEERGLNLTNLESALRKGFEVKLVI 204

[Close]

BLAST of Sed0024222 vs. ExPASy Swiss-Prot
Match: F4HQ23 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.7 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.7 PE=3 SV=3)

HSP 1 Score: 75.5 bits (184), Expect = 7.4e-13
Identity = 49/184 (26.63%), Postives = 85/184 (46.20%), Query Frame = 0


Query: 3   PPPHRIWKFTVDGCPNQSESGSD-IGYPFWGNERHRFCGRREFELNCKDNKTTTIEISST 62
           P P  + K  +  C    + G++  G+PFWG  R + CG    EL C +N  T++ IS+ 
Sbjct: 20  PLPWALSKEDLGWCEALFQCGNNTAGFPFWGGNRAKPCGHPLLELRCLNN-ITSLNISNH 79

Query: 63  KFNVLNISQPDHRMRIARSDLFDDYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQ 122
           ++NV +I Q  + +R+AR+DL   +C      T T  R +F    +  +++V Y+C P+ 
Sbjct: 80  EYNVFHIDQTSNTLRLARTDLLGSFCSAE-FNTPTFPREIFKLFPTYKSLTVLYNCDPKL 139

Query: 123 EILEDFRFWCGSVGGVNGSLNYAVGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEE 182
                +   C  +G              + + + S+     C+   +V V    + EE+E
Sbjct: 140 SYRSSYT--CPDLG--------------LFSMSQSLDYQNSCQDSFKVNVPTSFVPEEKE 185

Query: 183 RNRT 186
            N T
Sbjct: 200 MNLT 185

[Close]

BLAST of Sed0024222 vs. ExPASy Swiss-Prot
Match: F4HQ17 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.4 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 39/116 (33.62%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 28  YPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFDDYC 87
           +PFWG +RH+ CG    EL C  NK+T++ IS  +F VL++ Q  + + +AR DL   +C
Sbjct: 41  FPFWGGDRHKHCGHPLLELRCDQNKSTSLFISDQEFFVLHVDQTSYSLTLARPDLLHSFC 100

Query: 88  PRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDF-RFWCGSVGGVNGSLN 143
                 T TL   +F  S +  +++ +Y C P   +L D   + C  +G ++ S N
Sbjct: 101 SLTFTNT-TLPPEIFELSPAYKSVT-FYHCYP---VLPDLSNYTCPVIGPISVSGN 151

[Close]

BLAST of Sed0024222 vs. ExPASy Swiss-Prot
Match: F4HQ22 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.4 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 10  KFTVDGCPNQSESGS-DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNI 69
           K T+  C +Q + G+   G+PFWG  R   CG    EL+C DN  T++ IS   ++VL+I
Sbjct: 27  KQTLGWCESQFQCGNITAGFPFWGGNRPEVCGHPLLELHCLDN-ITSLTISDHLYHVLSI 86

Query: 70  SQPDHRMRIARSDLFDDYC-PRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDF 129
           +   + +R+AR+D     C    P   ATL   +F+   +  ++++ Y C P   ++ D 
Sbjct: 87  NHTYNTLRVARTDFLQSICLSPFPFANATLPPEIFDILPTYKSVTL-YRCYP---VIPDL 146

Query: 130 -RFWCGSVGGVNGSLN 143
            R+ C ++G V+ S N
Sbjct: 147 ARYGCPAIGSVSVSDN 157

[Close]

BLAST of Sed0024222 vs. ExPASy Swiss-Prot
Match: F4KA51 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.3 PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 7.6e-10
Identity = 45/161 (27.95%), Postives = 70/161 (43.48%), Query Frame = 0


Query: 26  IGYPFWGNERHRFCGRREFELNC-KDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 85
           +G+PFWG  R   CG    +LNC K + TT++ IS   ++VL+I    + + ++R D   
Sbjct: 48  VGFPFWGENRQSDCGHFSLKLNCNKPSNTTSLTISGHNYSVLHIDNKSNILSLSRQDFSG 107

Query: 86  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 145
            +C  +   +  L   LF       N++V+Y C P++    +F      +G V  +  Y 
Sbjct: 108 PFCSAS-FSSTPLRSDLFQNLQPYRNLTVFYMCDPRRHFFGNFTCPVKGLGSVVQNSTY- 167

Query: 146 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
                   R L       C     VTV    + EEE  N T
Sbjct: 168 --------RKL-------CDKSFSVTVPTSYVPEEEALNLT 191

[Close]

BLAST of Sed0024222 vs. ExPASy TrEMBL
Match: A0A6J1KH85 (LOW QUALITY PROTEIN: uncharacterized protein LOC111495731 OS=Cucurbita maxima OX=3661 GN=LOC111495731 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 3.1e-46
Identity = 99/161 (61.49%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGNER  FCGRREFELNCKDNKTTTIEISS +F+VLNIS+ +H M IARSDL  
Sbjct: 734 NIMYPFWGNERPEFCGRREFELNCKDNKTTTIEISSIEFHVLNISRSNHTMTIARSDLRT 793

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP+  I+T T+D RLF YS +DLN+SVWYDC     IL+++RF CGS G + G  NYA
Sbjct: 794 DYCPKIEIKTTTIDYRLFKYSLNDLNLSVWYDCPLLPGILDNYRFTCGSEGEIRGRANYA 853

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++G C+L +EVT+TK V  EE  +NRT
Sbjct: 854 ---FETEALNRSGNMSG-CRLNIEVTITKEVF-EETHKNRT 889

[Close]

BLAST of Sed0024222 vs. ExPASy TrEMBL
Match: A0A6J1E7K3 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431357 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 96/161 (59.63%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGNER  FCGRREFELNCKDN+TTT+EISS +F+VLNIS+  H M IARSDL  
Sbjct: 69  NITYPFWGNERPVFCGRREFELNCKDNRTTTMEISSIEFHVLNISRSKHTMTIARSDLRT 128

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP+   +T T+D RLF Y+ +DLN+SVWYDC  Q  IL+++RF CGS G + G  NYA
Sbjct: 129 DYCPKIETKTTTIDYRLFKYTLNDLNLSVWYDCPLQPGILDNYRFTCGSEGEIRGRANYA 188

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++ EC+L +EVT+TK V  EE  +NRT
Sbjct: 189 ---FETEALNRSRNMS-ECRLNIEVTITKEVF-EETHKNRT 224

[Close]

BLAST of Sed0024222 vs. ExPASy TrEMBL
Match: A0A6J1E6Z8 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431357 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 96/161 (59.63%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGNER  FCGRREFELNCKDN+TTT+EISS +F+VLNIS+  H M IARSDL  
Sbjct: 69  NITYPFWGNERPVFCGRREFELNCKDNRTTTMEISSIEFHVLNISRSKHTMTIARSDLRT 128

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP+   +T T+D RLF Y+ +DLN+SVWYDC  Q  IL+++RF CGS G + G  NYA
Sbjct: 129 DYCPKIETKTTTIDYRLFKYTLNDLNLSVWYDCPLQPGILDNYRFTCGSEGEIRGRANYA 188

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++ EC+L +EVT+TK V  EE  +NRT
Sbjct: 189 ---FETEALNRSRNMS-ECRLNIEVTITKEVF-EETHKNRT 224

[Close]

BLAST of Sed0024222 vs. ExPASy TrEMBL
Match: A0A6J1EAG8 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111431357 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 96/161 (59.63%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           +I YPFWGNER  FCGRREFELNCKDN+TTT+EISS +F+VLNIS+  H M IARSDL  
Sbjct: 69  NITYPFWGNERPVFCGRREFELNCKDNRTTTMEISSIEFHVLNISRSKHTMTIARSDLRT 128

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP+   +T T+D RLF Y+ +DLN+SVWYDC  Q  IL+++RF CGS G + G  NYA
Sbjct: 129 DYCPKIETKTTTIDYRLFKYTLNDLNLSVWYDCPLQPGILDNYRFTCGSEGEIRGRANYA 188

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++ EC+L +EVT+TK V  EE  +NRT
Sbjct: 189 ---FETEALNRSRNMS-ECRLNIEVTITKEVF-EETHKNRT 224

[Close]

BLAST of Sed0024222 vs. ExPASy TrEMBL
Match: A0A6J1ECR7 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431356 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 95/161 (59.01%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 25  DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFD 84
           ++ YPFWGNER  FCGRREF+LNCK NKTTTIEISS +F+VLNIS+  H M IARSDL  
Sbjct: 52  NVTYPFWGNERQEFCGRREFKLNCKHNKTTTIEISSIEFHVLNISRSKHTMTIARSDLRT 111

Query: 85  DYCPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGSLNYA 144
           DYCP+   +T T+D RLF Y+ +DLN+SVWYDC  Q  IL+++RF CGS G + G  NYA
Sbjct: 112 DYCPKIETKTTTIDYRLFKYTLNDLNLSVWYDCPLQPGILDNYRFTCGSEGEIRGRANYA 171

Query: 145 VGEHEMEARNLSVSINGECKLKLEVTVTKWVMEEEEERNRT 186
               E EA N S +++ EC+L +EVT+TK V  EE  +NRT
Sbjct: 172 ---FETEALNRSRNMS-ECRLNIEVTITKEVF-EETHKNRT 207

[Close]

BLAST of Sed0024222 vs. TAIR 10
Match: AT1G67000.1 (Protein kinase superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 4.7e-15
Identity = 43/158 (27.22%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 28  YPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFDDYC 87
           +PFWG  RH+ CG    EL+C +N  T++ IS+ +F V  I+Q  + + +ARSDL   +C
Sbjct: 47  FPFWGGNRHKPCGHPLLELHCNNNNITSLYISNQEFYVRQINQTSNTLTLARSDLLGSFC 106

Query: 88  PRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILE----------------DFRFWC 147
                 T TL   +F  S +  +++V Y C P+                     D+++ C
Sbjct: 107 SSYAYNTTTLPPEIFELSPTYKSLTVLYHCDPKLSYRSSYTCPALGTFSMSQSVDYQYSC 166

Query: 148 GSVGGVNGSLNYAVGEHEMEARNLSVSINGECKLKLEV 170
            +   VN   ++   E  +   NL  ++    ++KL +
Sbjct: 167 QNSFTVNVPTSFHPEERGLNLTNLESALRKGFEVKLVI 204

[Close]

BLAST of Sed0024222 vs. TAIR 10
Match: AT1G66880.1 (Protein kinase superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 9.9e-13
Identity = 50/170 (29.41%), Postives = 80/170 (47.06%), Query Frame = 0


Query: 20  SESGS-DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIA 79
           SE G+   G+PFWG  R + CG    EL+C  N  T++ ISS +F VL+++Q    +++A
Sbjct: 24  SECGNITAGFPFWGGNRLKHCGLPSLELHCSKN-ITSLFISSQEFYVLHLNQTSKTLKLA 83

Query: 80  RSDLFDDYCPRNPIETATLDRRLFNYSSSDLNISVWYDC-----------TPQQEIL--- 139
           R+DL    C  +   T TL   +F  S +   ++V+Y C            P +  +   
Sbjct: 84  RTDLLGSIC-NSTFTTITLPPNIFELSPTYKRLTVFYYCFLLTHYVSSYKCPMRGFIFVS 143

Query: 140 --EDFRFWCGSVGGVNGSLNYAVGEHEMEARNLS--VSINGECKLKLEVT 171
              ++   CG    V     +  GE E+   NL   +S   E K+K++ T
Sbjct: 144 ENHEYHKICGDTFTVIVPTRFGAGEKELNMTNLESVLSKGFEVKVKIDDT 191

[Close]

BLAST of Sed0024222 vs. TAIR 10
Match: AT1G66920.1 (Protein kinase superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 10  KFTVDGCPNQSESGS-DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNI 69
           K T+  C +Q + G+   G+PFWG  R   CG    EL+C DN  T++ IS   ++VL+I
Sbjct: 27  KQTLGWCESQFQCGNITAGFPFWGGNRPEVCGHPLLELHCLDN-ITSLTISDHLYHVLSI 86

Query: 70  SQPDHRMRIARSDLFDDYC-PRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDF 129
           +   + +R+AR+D     C    P   ATL   +F+   +  ++++ Y C P   ++ D 
Sbjct: 87  NHTYNTLRVARTDFLQSICLSPFPFANATLPPEIFDILPTYKSVTL-YRCYP---VIPDL 146

Query: 130 -RFWCGSVGGVNGSLN 143
            R+ C ++G V+ S N
Sbjct: 147 ARYGCPAIGSVSVSDN 157

[Close]

BLAST of Sed0024222 vs. TAIR 10
Match: AT1G66920.2 (Protein kinase superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 10  KFTVDGCPNQSESGS-DIGYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNI 69
           K T+  C +Q + G+   G+PFWG  R   CG    EL+C DN  T++ IS   ++VL+I
Sbjct: 27  KQTLGWCESQFQCGNITAGFPFWGGNRPEVCGHPLLELHCLDN-ITSLTISDHLYHVLSI 86

Query: 70  SQPDHRMRIARSDLFDDYC-PRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDF 129
           +   + +R+AR+D     C    P   ATL   +F+   +  ++++ Y C P   ++ D 
Sbjct: 87  NHTYNTLRVARTDFLQSICLSPFPFANATLPPEIFDILPTYKSVTL-YRCYP---VIPDL 146

Query: 130 -RFWCGSVGGVNGSLN 143
            R+ C ++G V+ S N
Sbjct: 147 ARYGCPAIGSVSVSDN 157

[Close]

BLAST of Sed0024222 vs. TAIR 10
Match: AT1G66940.1 (protein kinase-related )

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 33/114 (28.95%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 27  GYPFWGNERHRFCGRREFELNCKDNKTTTIEISSTKFNVLNISQPDHRMRIARSDLFDDY 86
           G+PF G  RH+ CG    EL+C  N  T++ IS+ K++VL I Q  + + +A+ +L   +
Sbjct: 45  GFPFSGGNRHKECGHPSLELHCNKNNITSLFISNQKYSVLRIDQTSNTLTLAKQNLLGSF 104

Query: 87  CPRNPIETATLDRRLFNYSSSDLNISVWYDCTPQQEILEDFRFWCGSVGGVNGS 141
           C  +     TL    F  S +  +++++Y C+     L  +   C  +G ++ S
Sbjct: 105 C-SSVFTNTTLPPETFELSRTYKSVTIFYQCSSVLPNLSSYT--CPEIGPISVS 155

The following BLAST results are available for this feature:

BLAST of Sed0024222 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001657.1	6.4e-46	61.49	LOW QUALITY PROTEIN: uncharacterized protein LOC111495731 [Cucurbita maxima]	[more]
XP_038893810.1	7.0e-45	58.39	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Ben...	[more]
KAG6584346.1	1.6e-44	59.63	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.8, par...	[more]
XP_022923742.1	2.7e-44	59.63	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isof...	[more]
XP_022923741.1	2.7e-44	59.63	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isof...	[more]

BLAST of Sed0024222 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ECH2	6.7e-14	27.22	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.8 OS=A...	[more]
F4HQ23	7.4e-13	26.63	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.7 OS=A...	[more]
F4HQ17	1.4e-11	33.62	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 OS=A...	[more]
F4HQ22	1.8e-11	32.35	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 OS=A...	[more]
F4KA51	7.6e-10	27.95	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3 OS=A...	[more]

BLAST of Sed0024222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KH85	3.1e-46	61.49	LOW QUALITY PROTEIN: uncharacterized protein LOC111495731 OS=Cucurbita maxima OX...	[more]
A0A6J1E7K3	1.3e-44	59.63	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isof...	[more]
A0A6J1E6Z8	1.3e-44	59.63	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isof...	[more]
A0A6J1EAG8	1.3e-44	59.63	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isof...	[more]
A0A6J1ECR7	1.7e-44	59.01	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof...	[more]

BLAST of Sed0024222 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67000.1	4.7e-15	27.22	Protein kinase superfamily protein	[more]
AT1G66880.1	9.9e-13	29.41	Protein kinase superfamily protein	[more]
AT1G66920.1	1.3e-12	32.35	Protein kinase superfamily protein	[more]
AT1G66920.2	1.3e-12	32.35	Protein kinase superfamily protein	[more]
AT1G66940.1	1.1e-11	28.95	protein kinase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025287	Wall-associated receptor kinase, galacturonan-binding domain	PFAM	PF13947	GUB_WAK_bind	coord: 16..79 e-value: 2.9E-14 score: 53.3
None	No IPR available	PANTHER	PTHR33138	OS01G0690200 PROTEIN	coord: 23..175
None	No IPR available	PANTHER	PTHR33138:SF45	WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED	coord: 23..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024222.1	Sed0024222.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0004672	protein kinase activity