Sed0024211 (gene) Chayote v1

Overview


Name	Sed0024211
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SWI/SNF complex component SNF12 homolog
Location	LG06: 3918580 .. 3928417 (-)
RNA-Seq Expression	Sed0024211
Synteny	Sed0024211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCCGGAGTGTAGCTGATGGACAATTTTACCCTTCCAAAAATTTCGTTTAATTTTAGAGATCGAAAAGAAAACGATGAAATTTGGTTGCAAAGAGAGTGGGAAGAGAGAAGCCATTGCGAAAGCGTCTTCGTTTTCTTTCTCTCTCAAATCTTCTCTCACTTTTTCAAAATCTCATTTTGTTTCTGTTCCAAACCTTACAGAAGACAAGAAAAGCTTCACCTCCAGTCAATTCTCCATCTCTGTAAGCCCTTCCATTCACCCCCACAACCCCTTTTTCCCCAATTTCGATTCCAAAATTTGGACCCCTTTTGCGTTTTCCTTCAATTTCATCTCCTAAACCCTTCAATCCAACCTCCCCTTTCGTTTTTGTGATGTGGGTCGTGTAATTTCATCGATTTCCATCGTTTCTTCTCTCATGAAATCTGGGTTTTGGGTTAGGGTTTTTTACGTCTCGATGTGGGGTTAGGGTTTTCGACACGTTTGGCTTGATTTGCTGGGATTTTGAGATTTGGGTTCTGTTGCTGTTGGTCTATTTCTTTGAAGAAGCTGGATTTCTTGGACTGTTAGGTATTTTTGTTTTTTGTTGCTGTTTTTGTTTTTGTATTGGATCGCTAGTCTGAAATACGCTGGAATCTTTGTGGGGTTTGAGATTTTTTGGGGCAATGCTTGAATAGACGTTTGAAATTTTGTTGGTTTTTGAACTGTTGGTTAGTGGAATTGGTTATATAGTGTGTGATGTCTATGAACAATAATAATAACCAGCAGAAGAGCCTTGGAGGGGCATCTTTTGGAAATTCTGGAATGGTTCCACCTTCTATGGCTGCAAATCCCACATTTTCTCAATCTCAATTAGGAGCTGGGTTTCAAACTCCATATCAGCTAACCCCTGCTCAGGCTTTGGCCCAAGCTCAGTTGAAGGCTCATGCTCAAGCTCAAGCACAAGCAGCTCACGCCCAGTTTCAAGCTCAGTTGCAAGCTCAAGGGCTGACGCTAACTCCGAGCGGGACTGTTGGTGGTGGGAACATGGGTGGTTCCCCTTTGCAGGGGTTTTCCACACCGGGCCTCACAGGTATGAAGCGGATTCCTCAGAAGCCACCAGTTCGGCCTCCTATTCTTTCCCCTGCTACTGCGTATTCTCCTTTGAAAACGATGGAACTAACGCCGGCCGCTCGGAAAAAGAAGCAGAAACTACCTGAGAAGCAGCTGCAAGATAAGGTTGCTGCTATCTTACCCGAGTCTGCTCTCTACACTCAGCTGCTTGAGTTTGAGTCTCGTGTCGATGCTGCACTTTCGAGAAAGAAAGTTGACATCCATGAAGCACTTAAGAACCCACCTTGCATTCAGAAAACTCTTCGAATTTATGTCTTCAACACATTTGCTAATCAAGTTAACGCAATGACCAAAAACCCCAATGCTGATCCTCCTACCTGGACCCTCAAGATAATTGGTAGAATTTTGGAAGATGGGATAGATCCTGATAATCCTGGTGTGGTACAAAGATCAAATCCTTTGTACCCAAAATTTTCATCATTCTTCAAGAGAGTAACCATTTCCTTGGACCAGAGGTTATATCCAGATAGTCACATCATAGTATGGGAAAATGCTCGGTCGCCTGCACCTAATGAGGGCTTTGAGGTGAAGAGAAAAGGGGATAAAGAATTTACAGTCAACATTCGGTTAGAAATGAATTACATTCCAGAGAAATTCAAGCTGTCGCCTGCGTTAACGGAAGTTCTTGGTATTGAAGTTGATACTCGGCCAAGAATAATAGCTGCAATCTGGCATTATGTAAAGGCTCGAAAACTTCAGAATCCCAACGATCCATCTTTGTTTCATTGTGATCCGCCACTTCAGAAGGTATTTGGGGAAGACAAGTTGAAATTCACCATGGTTTCACAGAGAATATCACAGCACTTGTTTCCTCCACAGCCTATACATTTGGAGCATAAGATTAAGCTTTCAGGGAATAATCCAGCGGCCACAGCATGTTATGATGTGTTAGTTGATGTGCCTTTTCCAATTCATAGGGAATTGTCTGCTCTGTTAGCCAATGCAGAGAAGAACAAGGAGATCGATGCTTGTGACGAAGCAATATGTACAGCTGTAAAGAAAATTCACGAGCATCGACGAAGACGTGCATTTTTCCTTGGGTTCAGTCAGTCACCGGTGGAGTTTATTGATGCCTTGATTGATTCTCAAAGCAAGGATATAAAAATTCTTGCAGGAGAAGCTAGTCGAAATGCTGAGAAGGAGCACCGGTCAGATTTCTTCAATCAACCATGGTAAGTCTGTTCTCAATTTCAACTGTTGTTTATACTTCTTATCCTTTTATTCATTCATTAACAATCATAGCGATACATATTAACAACTAAGGATAACTATTTTGTTTTTGGTTTTATTTTAAAGTTAAGCTTATAAATTCTACTACTGCCCATAGCTCTCTTACTTTGTACCTACTTAATATGTGTCTTTAAAACGCTTTAAAAAATCAAGCCAAAATTTGGAAACTAAAAAAAGTAGCTTTTAATAGCCTGATTTTGTTTATGAGAGAATTCAAATGTAATTTTGAGGAAAGTTAAAAGCTTAAAAAACTATGAAAAGACGAACATGATTTTCTAAAAACATAATGGTTATCAAATGAGACCTAACTTTTGCATTCACACAAATGGCTATGTGTGCGTGGATTGGGCCTGAGAAGATATATCCCTAGCTTCCCCTTCTCTGTAGCTGTTTTATTTTTGCATCATAGGCAAAAGTTATCATATATGTTGGTCTTTTTTTCTCTTTTCTAAAAAGAGATTATTCTTCAAGCTTTTAGTTTGCCTCTCACACAGATTTTTCAATGGGGTAAAGATTATAATATGGGGATTACCTATTACATTCCATTTTCCATTTTTAAAAATATTTTTGACTGTCTGGGCCAGCTTATGCGCATCTCAACTATTGTCACTATTAGGATCCTGATAGAATCCACTACTATTTTATTAAGAACTAAGATAATCTCTCGAGAGGATCTCTCAAAGAGCCAATTACAAAGACAACAACTGTTTCAATGCCCTCCTAGAGGCCTAACATCTCCTATTTATAATAACCTAGCATTTAACCTAATTAAGACAATAATCCCTATTAAGGCCCAAAAGCCCAATACACTTAAATAACAAAACAGAATTATATTTAATAAAGCAATAAAACGGGATTCGTCACTTCTTGATTCGCCTTGAATATACTTTCAACGACCTCGGGTTCGTATCAATACTTCCCCCCCAAAGAGCCACCTTGTCCTCAAGGTGAAAGTCCGGAAATTGGAGCTCTAGATCGGCAGCAGACTCCCAAGTAGCATCATCAGGAGTGGATCCTTCCCACTGTATCAAAACATGGCGCGAACCTCCCACCTGCGAGGACTCTCGTAAACCCAAAACAGCCTTGGGACAAACGAGCACGCCTAGATCATCTCCCACCAACGTTGGCGTAGGGAAAACGAGCCAAGAGGAACCAACCGCCTTGCGCAGTACGGAAACATGAAAAACCGGGTGAATCCTCACCGTCGGCGGTAAGTCCAACCGGTACGCCACTGGCCCCACCCGAGCCAACACACGGTATGGTCCGATGAACCGTGGTGCTAACTTGGGGTGTGTAAATTTCGCCAAGGAAGACTGGCGATAGGGACGGAGCTTAACATACACCACATCGTCCACCTCAAACTGAATATCGCGACGCTTGGCGTTAGCACGCTCTGTCATTAATTGCTTTGGCGCGCAACAAATTGGCCTTAAGCTTCTCAACATCCTATCACGTTCCAAAGATTAAGGAATCCATCATGTTGCCACCGGACTAGCCCCATAATCATACCCCAAAATGGTCGGCGGAGAACGCTGTAAACAATTTCAAACGGAGTCATCCCCATAGACGAGTGAAATGACGTGTTGAAACCGAACTCCGCCCAAGCCACCCATCGATACGGGCCTTCTACCGTGTCATCACAAAACATCTTAGATACGATTCTAAACAACGATTCACCACCTCGGTTTGGCCATCGGTTTGGGGGTGGTAGGTAGTACTACGACGTAGGCCCGAGTCCCGAAGCCTTGGATATCTCTTCCCGAGAGAGGCTAGTGAATATCTTGTCACGGTCCGACACGATACTCTTAGGCACTTCGTGCAAACGGACCACTTCTCTGATAAAGACCTGTGATACTGTGAGAGAGGTAAATGGGTGCCTCAGGGGTATAAAGTGAGCGTACTTAGAAAGCCGATCCACCACCACAAGGATGGTGTCATAACCTTCAGAACGGGGAAGTCCTTCGACAAAATCCATCGAAATGTCTTCCCAAATCCTGTCCGGAATCGGTAATGGTTGCAAAAGACCAGCTGGCGACAACGATAGATGTTTCGCTTGAATACAAATCGAGCATTCGGCTACAAATGCGCGGACGCGAGCCTTCATTCCAGGCCAATACACTTCTTTCGCTAGACGATGGTACGTCTTTAGGGTCCCGAAGTGCCCCCCGATGGCCCCCCCGTGGAACTCATTGAGTAACAGAGGAATCGTGGGTGAAGTCGGAGGTAGCACCAACCTACCCTGGTATAAGAGGACATCACCCATAACGGAGTAACCTGGCGGACTCTCCTCGCCTGCCACCACAGCAGTATAAATAGCAAACAACTTTTCATCTTCCCTCACTTGTTGAGTGAACACTGCTTTGTGTTAACTCCCGCCACACAACTCAACATGCTTAACTCCCTACAAGGCATACGAGATAGGGCATCCGCCGCTCTGCTTTCTAACCCTTTCTTGTATTCAATATGGAAATCGTAACTCGAGAGTTTCGCTATCCATCGCTGGTATTCGCCATCAACAACACGTTGTTCTAGCAGAATTTAAGGCTCTTCCGTCCGTGACGCACAATAAAGTGATGTCCCAATAGATAAGCTCGCCAACGCTGGATCAGCAAACACGATAGCCATCAACTCGCGCTCATAAATCGACTTCACGCGATGGGTGATGGGAAGAGCCTTCTTCGTAATAGGCCAAAGGTCGCCTCGTTGCATCAAGATCGCACCACACCAATACCGTAAGCATCGGTCTCACAACAAACAATCCGATCAAAGTCCGCAATCGCACATCGGCACACTACTCATTGCATGCTTAAGTCTCTGAAAACACTCTTCATTTGTTGGGCCCCATTCAAACTTTCCCTTTTTCAACAAATTGAGTTAATGGAAAGGCCATCGACCCATAATTCGCCACAAAACGACAGTAGTAACCTGTGAGCCCGAGGAATCCCCTTAAATCTTTAATGTTTTTAGGGCTTGGCCAACGCACCATGGCCACAATTTTCTCCGGATCGGCAAACACTCCCTCAAGCAGAGATATAAAATGCCCCAAATACTCAATCTGCGCAATCCAAATCGACATTTCTTGGCATTTGCCACCAAGGCATGTGCTTGTAACACTTCAAAACGCTGATTAGGTGCTCCTTATGTTCATCGATGGTCACACTGTATATCAGGATGTCATCAAAAAATACTAGCACAAACCTGCGTAGGAACGGACGCAAAAGCTCATTCATAACTGACTGAAATGTCGCCGGCGCGTTGCGTAATCCGAAAGGCATGACTACAAACTCGTAGTGGCCCTCATGAGTTCTAAAAGTCGCTTTGTGTACATCACCCGCTTAACCCGTATTTGATGGTACCCCGCCTTAAGATCAATTTTGGAAAATACCGCCCCCATGCAACTCATCCAAGAATTCATCAACCAATAGTATCGGATACTTATCGGGCAATCGTTGCTTGATTCAGTATAGCGATAGTCGATACGTAAACGCCAACTCCCATCCTTCTTTTTAACCAATAGAATCGGACTCGAAAATGGACTCGTGCTAGGTGGATAATACCTGCCAATAACATTTCTCCCACTAATTTTTCAATCTCGTTCTTCCGCATCGTGGGTACCTATACGGACGTACATTCACTGAGTCCTTGCACGGCAATAGCGCAATAGCATGGTCGCAATTACGCCGTGGAGGAAGACTCACAATGATTCAAAACCGGGTGAGTATAAACGGCGTATGGAGTGGAGTTCTCACGGTGCACCGGACAAGTCGGTAGGGTCCCTGATCGCTTCACGAGAGACGGTATCGGGGTTTCAATCATATTGAGCTCGACCGTAAGCCCCCGCTCCTCGGGCGTAAGGATTTCATCATAGATTTCAATGAAACTCCGGGCCTTGACCAGTCGTGGCTCGCCTCGCACTGACCGCCTCGACCCCACTTTTGAATTTCATTTTAAGTGCGCGATAGTCAAATTCAATTTTTCCCAATGTTGCTAGCCACACCACACCCAAAATCACATCCGCACTACCCAAGGGTAAGGGCAAGAAATCATTTACTATTCTCATCTTGGTCAACTGAAGTTCCACATTCTTACAAATGCCAGCAGTTCTCACAGAATCTCCAGTACCCAACATAATGCCATAATCATCAGACGGTTCTACCGGTAATTTCAACTTAGCAACCATGTCCTCGGATATGAAGTTATGCGTAGCCCCACTATCGATTAATACTACCACTTCATGTCCTCGTATCGAGCCTGTAACCTTCAATGTTTTTGGGGAGCTCAGTCCTGCCATGGAGTGCAATGAAAGAGCTGCCATATTCGGTGTATCCACCAATTCCTCAACACAAGCATCTTCGGACGTATAATCTTGGGCATCATCAATTTCTTCATTTTCCCGATTTTCTAATGCATCACGTACAACAAGAATCTCTAGAGCTTGCAGTTCCTTTTTCTTACACCGGTGCCCCGGCACAAATTTCTCGTCACACCTAAAACATAGCCCCTTGTCTTTGCGAATGCGGATCTCACTATCTGTTAAGCGTTTATACGGGATAGTGGGAGTGAGGTTGGTTGACGGAGTCGATCGGCTGGCAAAAGCTGAGACGGGTGTGATGGTTTTTAGGTTCGTTCCCCCTGCTACTCTTGTACTCATAGTCCCTGAACCCAGGCTTGATTTAATCGATGACGTCGTAGTACTACCTCCTTTGGCTTGACTTCGAAAAGCTAGGTCATCTTCGATTACTTGTGCCATGAATTTCTTATCCTGGATTCCGACTGGTCTCAATTTTCTCATTTCACTTCGTATTTCTGCCTTCAGACCACTCTCCCATTTCCCTTCCAAGGCACTCGCACTAATATCGCGCATACCCTTTGCATATTTTTCAAACAACCTAGCGATACTCCTTGACTGCTCCCACTTGTTGCAGACTCATCAAGTTGGCATATTTATTGTCATTGATCGTTGGTTGGAAACGATGCAATAGCAATTCACGAAACTCTTCCCACGAAGCAATCGGAGCCCGGTCCTCTTCATACTGTAGCCATTCCAATGCCTCCCCTTCCATACACAGTGGTTTGCATCGACCCTTTCATGGCCCGCCAACCTATTTACCTGTAAATATCTTTCCACTCGGCGAGCCACACCCGTCCGGTCCTCATCGATAAGACCCTTAAACACCGGCATTTCTAATTTCCGTGAACCGTCTATCAACCATTGGTCCCTCCCATCCGCCGCGCTCCTGGTCCCCTCGGTCACCCCGTTCTTGCTGTCCCTCCAATCCTCCCGCTGTTCCAAACTGTCATGCGCGCAATCGGCCTTTCATAGCCTATGCGCACCTTCCTCTCCTCCGACAAAACATTTCCCGCCCCTCGAACCGGCCATCTCCCCTTCGTCCGAATTCAAACCCATATATTGTTCCCCATCAGACCAACCACGAAAATTTTCCCTCCGGTCCACCTCGGGTGGACCCGAACTCGCTTCGGACCCCGGCCGACCGCCAAAGACTTCTGTGCGTCCTCGCCTCGCCCGCGCCTGCCCGCCGCTCCGCCACCACGACCCGCGCCCCACTCGGTTCCACCAGCGCGCGAGGCCGCGCCCACTCGCTAGCGCCCGGCCCGTCCCCGACTGCACCCGCTCACCCCGCTAGGGCTCGCGCCCACTCGCCCAATGGCCCCGACCACCATCGCTCACCCGCCCGAAACCGCGCCCGCACCGCGCTCGCGATCCACTCCCGCTTCGCCGCGCGCCGGCCCGCCTCGGCCGCTCGGCCGCACCCCACGACCGTTCTCCTCGTGCCGCCCGTCGCCGCTCGCTCGCCCCTCGCGCGCGCCGGCCTCGCCCGCGCCGTGTCGCCCTCTCGCGCGCCCTCCGCTCGCCACGTCCCCGCCGGCCCCACCGCGTCGGACCGACCACCTGCTCAACCCTCCGCCGCCGACGCCCGCTTCTCCCCTTCGGCTTCGCCAGCAAGCCCTTTCCCTTTCTCCGCGATAGCTTGGTTCGGGATTCGGCGGTTCCGATTTATGCGTTCTAAAAGCTTCGTATGTTGAGATTCAACTGCCCAAACTCTGGTCCATCCGACTCCCCATAGCCGCCAACCAACCTCGAACTCTTTCTGCTTTTTTAGCATCTCGCACCGCTTTCCTCGCACTCTTGCACCTGGTCTCCATCTTAGTACTCACCATTCCCGGATCGGCAAATGGCTCTGATACCAAAATGATAGAATCCACTACTATTTTATTAAGAACTAAGATAATCTCTCGAGAGGATCTCTCAAAGAGCCAATTACAAAGACAACAACTGTTTCAATGCCCTCCTAGAGGCCTAACATCTCCTATTTATAATAACCTAGCATTTAACCTAATTAAGACAATAATCCCTATTAAGGCCCAAAAGCCCAATACACTTAAATAACAAAACAGAATTATATTTAATAAAGCAATAAAACGGGATTCGTCACTTCTTGATTCGCCTTGAATATACTTTCAACGACCTCGGGTTCGTATCAGATTCCACTACATTCCACATTGGAAAAGTGGAGAGTCTCCACACTATCTAATATAGTAACATAGCTCATTAAGTCCAAATGGATATTCGGTTCAATAAAATGAAATTCGGATCTAATTCAAGATTGGTGAAACCCAAAAGAGGCACAATCTTGAAGAGCATGTTAGGATCTCACTATTGTCTCATATTGGAAAAGTTGGTCTTTCAAGTAAGGTAGACTATTCCTCTCATCACCAATTGATTTTGAGATGGATCATGGATGGCCACACTATCTAATAATCACTGGACACTGTGTTTGGCCTAGATGTTAAGGAAACTCATAGGAAATTATTCGTAGGTAGGTGGCTATCATGGGTTGAATCCATCACCTCTTAGTTATTTATGGTCCTCTTGACCACTAGGCCACTTTGCATTTTATCATGTTGAGTTTGAATTTAAAATGTATGTTTGATTAAACAGGGTCGAAGATGCTGTCATTCGGTACATAAATCGAAAACCAATGGCAGGAAGCGATGCACCCGGAAGTACATGACTGGGATCTTTATGAGCTTCTCTAGGTTGCCATTTTTGTTGGGAACTTAATAATAGCAAGGTAAGATACATGTATGACATCCTTTAGTTCGTTAGCAAACGTCGAATCATTGCGATGTAACGAGAATGGTATGTGAATTCCATAAAACATGCTCTGTAGTCTATGCGAGCATTATCCATCCATCAATTAGTTAGCTGGTGATGAAAAATGCCTCATGAACATCATATATGGTTTCTTCAGTCATTTTCTTATAGCATCCTTTATTGTATGGAACATTTCTTGTAGTAGAATCTGCAACCATATTGTTGAGAATTTTTTTACTGGTAAAAGCCCCTTGTGAAGATGAAAGTCCATGATGATTTGTCAATTCCACTTGTGGAACTCTTGCAATTATTCCTTGAACATGTAGTTTGTTATCTTTTTCAAATTTCATGTTTCTTGATAGTTGAATGTGCAACTGGG

mRNA sequence

GACCCGGAGTGTAGCTGATGGACAATTTTACCCTTCCAAAAATTTCGTTTAATTTTAGAGATCGAAAAGAAAACGATGAAATTTGGTTGCAAAGAGAGTGGGAAGAGAGAAGCCATTGCGAAAGCGTCTTCGTTTTCTTTCTCTCTCAAATCTTCTCTCACTTTTTCAAAATCTCATTTTGTTTCTGTTCCAAACCTTACAGAAGACAAGAAAAGCTTCACCTCCAGTCAATTCTCCATCTCTGTAAGCCCTTCCATTCACCCCCACAACCCCTTTTTCCCCAATTTCGATTCCAAAATTTGGACCCCTTTTGCGTTTTCCTTCAATTTCATCTCCTAAACCCTTCAATCCAACCTCCCCTTTCGTTTTTGTGATGTGGGTCGTGTAATTTCATCGATTTCCATCGTTTCTTCTCTCATGAAATCTGGGTTTTGGGTTAGGGTTTTTTACGTCTCGATGTGGGGTTAGGGTTTTCGACACGTTTGGCTTGATTTGCTGGGATTTTGAGATTTGGGTTCTGTTGCTGTTGGTCTATTTCTTTGAAGAAGCTGGATTTCTTGGACTGTTAGGTATTTTTGTTTTTTGTTGCTGTTTTTGTTTTTGTATTGGATCGCTAGTCTGAAATACGCTGGAATCTTTGTGGGGTTTGAGATTTTTTGGGGCAATGCTTGAATAGACGTTTGAAATTTTGTTGGTTTTTGAACTGTTGGTTAGTGGAATTGGTTATATAGTGTGTGATGTCTATGAACAATAATAATAACCAGCAGAAGAGCCTTGGAGGGGCATCTTTTGGAAATTCTGGAATGGTTCCACCTTCTATGGCTGCAAATCCCACATTTTCTCAATCTCAATTAGGAGCTGGGTTTCAAACTCCATATCAGCTAACCCCTGCTCAGGCTTTGGCCCAAGCTCAGTTGAAGGCTCATGCTCAAGCTCAAGCACAAGCAGCTCACGCCCAGTTTCAAGCTCAGTTGCAAGCTCAAGGGCTGACGCTAACTCCGAGCGGGACTGTTGGTGGTGGGAACATGGGTGGTTCCCCTTTGCAGGGGTTTTCCACACCGGGCCTCACAGGTATGAAGCGGATTCCTCAGAAGCCACCAGTTCGGCCTCCTATTCTTTCCCCTGCTACTGCGTATTCTCCTTTGAAAACGATGGAACTAACGCCGGCCGCTCGGAAAAAGAAGCAGAAACTACCTGAGAAGCAGCTGCAAGATAAGGTTGCTGCTATCTTACCCGAGTCTGCTCTCTACACTCAGCTGCTTGAGTTTGAGTCTCGTGTCGATGCTGCACTTTCGAGAAAGAAAGTTGACATCCATGAAGCACTTAAGAACCCACCTTGCATTCAGAAAACTCTTCGAATTTATGTCTTCAACACATTTGCTAATCAAGTTAACGCAATGACCAAAAACCCCAATGCTGATCCTCCTACCTGGACCCTCAAGATAATTGGTAGAATTTTGGAAGATGGGATAGATCCTGATAATCCTGGTGTGGTACAAAGATCAAATCCTTTGTACCCAAAATTTTCATCATTCTTCAAGAGAGTAACCATTTCCTTGGACCAGAGGTTATATCCAGATAGTCACATCATAGTATGGGAAAATGCTCGGTCGCCTGCACCTAATGAGGGCTTTGAGGTGAAGAGAAAAGGGGATAAAGAATTTACAGTCAACATTCGGTTAGAAATGAATTACATTCCAGAGAAATTCAAGCTGTCGCCTGCGTTAACGGAAGTTCTTGGTATTGAAGTTGATACTCGGCCAAGAATAATAGCTGCAATCTGGCATTATGTAAAGGCTCGAAAACTTCAGAATCCCAACGATCCATCTTTGTTTCATTGTGATCCGCCACTTCAGAAGGTATTTGGGGAAGACAAGTTGAAATTCACCATGGTTTCACAGAGAATATCACAGCACTTGTTTCCTCCACAGCCTATACATTTGGAGCATAAGATTAAGCTTTCAGGGAATAATCCAGCGGCCACAGCATGTTATGATGTGTTAGTTGATGTGCCTTTTCCAATTCATAGGGAATTGTCTGCTCTGTTAGCCAATGCAGAGAAGAACAAGGAGATCGATGCTTGTGACGAAGCAATATGTACAGCTGTAAAGAAAATTCACGAGCATCGACGAAGACGTGCATTTTTCCTTGGGTTCAGTCAGTCACCGGTGGAGTTTATTGATGCCTTGATTGATTCTCAAAGCAAGGATATAAAAATTCTTGCAGGAGAAGCTAGTCGAAATGCTGAGAAGGAGCACCGGTCAGATTTCTTCAATCAACCATGGGTCGAAGATGCTGTCATTCGGTACATAAATCGAAAACCAATGGCAGGAAGCGATGCACCCGGAAGTACATGACTGGGATCTTTATGAGCTTCTCTAGGTTGCCATTTTTGTTGGGAACTTAATAATAGCAAGGTAAGATACATGTATGACATCCTTTAGTTCGTTAGCAAACGTCGAATCATTGCGATGTAACGAGAATGGTATGTGAATTCCATAAAACATGCTCTGTAGTCTATGCGAGCATTATCCATCCATCAATTAGTTAGCTGGTGATGAAAAATGCCTCATGAACATCATATATGGTTTCTTCAGTCATTTTCTTATAGCATCCTTTATTGTATGGAACATTTCTTGTAGTAGAATCTGCAACCATATTGTTGAGAATTTTTTTACTGGTAAAAGCCCCTTGTGAAGATGAAAGTCCATGATGATTTGTCAATTCCACTTGTGGAACTCTTGCAATTATTCCTTGAACATGTAGTTTGTTATCTTTTTCAAATTTCATGTTTCTTGATAGTTGAATGTGCAACTGGG

Coding sequence (CDS)

ATGTCTATGAACAATAATAATAACCAGCAGAAGAGCCTTGGAGGGGCATCTTTTGGAAATTCTGGAATGGTTCCACCTTCTATGGCTGCAAATCCCACATTTTCTCAATCTCAATTAGGAGCTGGGTTTCAAACTCCATATCAGCTAACCCCTGCTCAGGCTTTGGCCCAAGCTCAGTTGAAGGCTCATGCTCAAGCTCAAGCACAAGCAGCTCACGCCCAGTTTCAAGCTCAGTTGCAAGCTCAAGGGCTGACGCTAACTCCGAGCGGGACTGTTGGTGGTGGGAACATGGGTGGTTCCCCTTTGCAGGGGTTTTCCACACCGGGCCTCACAGGTATGAAGCGGATTCCTCAGAAGCCACCAGTTCGGCCTCCTATTCTTTCCCCTGCTACTGCGTATTCTCCTTTGAAAACGATGGAACTAACGCCGGCCGCTCGGAAAAAGAAGCAGAAACTACCTGAGAAGCAGCTGCAAGATAAGGTTGCTGCTATCTTACCCGAGTCTGCTCTCTACACTCAGCTGCTTGAGTTTGAGTCTCGTGTCGATGCTGCACTTTCGAGAAAGAAAGTTGACATCCATGAAGCACTTAAGAACCCACCTTGCATTCAGAAAACTCTTCGAATTTATGTCTTCAACACATTTGCTAATCAAGTTAACGCAATGACCAAAAACCCCAATGCTGATCCTCCTACCTGGACCCTCAAGATAATTGGTAGAATTTTGGAAGATGGGATAGATCCTGATAATCCTGGTGTGGTACAAAGATCAAATCCTTTGTACCCAAAATTTTCATCATTCTTCAAGAGAGTAACCATTTCCTTGGACCAGAGGTTATATCCAGATAGTCACATCATAGTATGGGAAAATGCTCGGTCGCCTGCACCTAATGAGGGCTTTGAGGTGAAGAGAAAAGGGGATAAAGAATTTACAGTCAACATTCGGTTAGAAATGAATTACATTCCAGAGAAATTCAAGCTGTCGCCTGCGTTAACGGAAGTTCTTGGTATTGAAGTTGATACTCGGCCAAGAATAATAGCTGCAATCTGGCATTATGTAAAGGCTCGAAAACTTCAGAATCCCAACGATCCATCTTTGTTTCATTGTGATCCGCCACTTCAGAAGGTATTTGGGGAAGACAAGTTGAAATTCACCATGGTTTCACAGAGAATATCACAGCACTTGTTTCCTCCACAGCCTATACATTTGGAGCATAAGATTAAGCTTTCAGGGAATAATCCAGCGGCCACAGCATGTTATGATGTGTTAGTTGATGTGCCTTTTCCAATTCATAGGGAATTGTCTGCTCTGTTAGCCAATGCAGAGAAGAACAAGGAGATCGATGCTTGTGACGAAGCAATATGTACAGCTGTAAAGAAAATTCACGAGCATCGACGAAGACGTGCATTTTTCCTTGGGTTCAGTCAGTCACCGGTGGAGTTTATTGATGCCTTGATTGATTCTCAAAGCAAGGATATAAAAATTCTTGCAGGAGAAGCTAGTCGAAATGCTGAGAAGGAGCACCGGTCAGATTTCTTCAATCAACCATGGGTCGAAGATGCTGTCATTCGGTACATAAATCGAAAACCAATGGCAGGAAGCGATGCACCCGGAAGTACATGA

Protein sequence

MSMNNNNNQQKSLGGASFGNSGMVPPSMAANPTFSQSQLGAGFQTPYQLTPAQALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLTGMKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPTWTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNNPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFLGFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMAGSDAPGST

Homology

[Close]

BLAST of Sed0024211 vs. NCBI nr
Match: XP_022989619.1 (SWI/SNF complex component SNF12 homolog [Cucurbita maxima] >XP_022989620.1 SWI/SNF complex component SNF12 homolog [Cucurbita maxima])

HSP 1 Score: 972.6 bits (2513), Expect = 1.4e-279
Identity = 492/547 (89.95%), Postives = 517/547 (94.52%), Query Frame = 0


Query: 1   MSMNN-NNNQQKSLGGAS---FGNSGMVPPSMAANPTF----SQSQLGAGFQTPYQLTPA 60
           MSMNN NNN  KSLGG S   FGNSG++PPSMAAN +F    +QSQLGAGFQTP+QLTPA
Sbjct: 6   MSMNNINNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTPA 65

Query: 61  QALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLTG 120
           QALAQAQLKAHAQAQAQAAHAQFQA LQAQGL+LT S  +GGGNM GSPLQGFSTPGL G
Sbjct: 66  QALAQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQAIGGGNM-GSPLQGFSTPGLAG 125

Query: 121 MKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT 180
           +KRIPQKPPVRPPILSPAT +SPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT
Sbjct: 126 VKRIPQKPPVRPPILSPATPFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT 185

Query: 181 QLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPTW 240
           QLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVN + + PNADPPTW
Sbjct: 186 QLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPRKPNADPPTW 245

Query: 241 TLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARS 300
           TLKIIGRILEDGIDPD+PGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHIIVWENARS
Sbjct: 246 TLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENARS 305

Query: 301 PAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHYV 360
           PAPNEGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHYV
Sbjct: 306 PAPNEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV 365

Query: 361 KARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNN 420
           KARKLQNPNDPS+FHCD PLQKVFGEDK+KFTMVSQRISQHLFPPQPIHLEHKIKLSGN+
Sbjct: 366 KARKLQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGNS 425

Query: 421 PAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFLG 480
           P  TACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTA++KIHEHRRRRAFFLG
Sbjct: 426 PVGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLG 485

Query: 481 FSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMAG 540
           FSQSPVEFIDALIDSQSKD+K+LAGE SRN EKE RSDFF+QPWVEDAVIRYIN+KP AG
Sbjct: 486 FSQSPVEFIDALIDSQSKDLKLLAGEGSRNPEKERRSDFFHQPWVEDAVIRYINQKPTAG 545

[Close]

BLAST of Sed0024211 vs. NCBI nr
Match: KAG7022667.1 (SWI/SNF complex component SNF12-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 970.3 bits (2507), Expect = 6.8e-279
Identity = 491/548 (89.60%), Postives = 517/548 (94.34%), Query Frame = 0


Query: 1   MSMN--NNNNQQKSLGGAS---FGNSGMVPPSMAANPTF----SQSQLGAGFQTPYQLTP 60
           MSMN  NNNN  KSLGG S   FGNSG++PPSMAAN +F    +QSQLGAGFQTP+QLTP
Sbjct: 1   MSMNNMNNNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTP 60

Query: 61  AQALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLT 120
           AQALAQAQLKAHAQAQAQAAHAQFQA LQAQGL+LT S  +GGGNM GSPLQGFSTPGL 
Sbjct: 61  AQALAQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQGIGGGNM-GSPLQGFSTPGLA 120

Query: 121 GMKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALY 180
           G+KRIPQKPPVRPPILSPAT +SPL+TMELTPAARKKKQKLPEKQLQ+KVAAILPESALY
Sbjct: 121 GVKRIPQKPPVRPPILSPATPFSPLRTMELTPAARKKKQKLPEKQLQEKVAAILPESALY 180

Query: 181 TQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPT 240
           TQLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVN + + PNADPPT
Sbjct: 181 TQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPRKPNADPPT 240

Query: 241 WTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR 300
           WTLKIIGRILEDGIDPD+PGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHIIVWENAR
Sbjct: 241 WTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENAR 300

Query: 301 SPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHY 360
           SPAPNEGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHY
Sbjct: 301 SPAPNEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHY 360

Query: 361 VKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420
           VKARKLQNPNDPS+FHCD PLQKVFGEDK+KFTMVSQRISQHLFPPQPIHLEHKIKLSGN
Sbjct: 361 VKARKLQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420

Query: 421 NPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFL 480
           +P  TACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTA++KIHEHRRRRAFFL
Sbjct: 421 SPVGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFL 480

Query: 481 GFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMA 540
           GFSQSPVEFIDALIDSQSKD+K+LAGE SRN EKE RSDFF+QPWVEDAVIRYIN+KP A
Sbjct: 481 GFSQSPVEFIDALIDSQSKDLKLLAGEGSRNPEKERRSDFFHQPWVEDAVIRYINQKPTA 540

[Close]

BLAST of Sed0024211 vs. NCBI nr
Match: KAG6588902.1 (SWI/SNF complex component SNF12-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 970.3 bits (2507), Expect = 6.8e-279
Identity = 491/548 (89.60%), Postives = 517/548 (94.34%), Query Frame = 0


Query: 1   MSMN--NNNNQQKSLGGAS---FGNSGMVPPSMAANPTF----SQSQLGAGFQTPYQLTP 60
           MSMN  NNNN  KSLGG S   FGNSG++PPSMAAN +F    +QSQLGAGFQTP+QLTP
Sbjct: 160 MSMNNMNNNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTP 219

Query: 61  AQALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLT 120
           AQALAQAQLKAHAQAQAQAAHAQFQA LQAQGL+LT S  +GGGNM GSPLQGFSTPGL 
Sbjct: 220 AQALAQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQGIGGGNM-GSPLQGFSTPGLA 279

Query: 121 GMKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALY 180
           G+KRIPQKPPVRPPILSPAT +SPL+TMELTPAARKKKQKLPEKQLQ+KVAAILPESALY
Sbjct: 280 GVKRIPQKPPVRPPILSPATPFSPLRTMELTPAARKKKQKLPEKQLQEKVAAILPESALY 339

Query: 181 TQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPT 240
           TQLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVN + + PNADPPT
Sbjct: 340 TQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPRKPNADPPT 399

Query: 241 WTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR 300
           WTLKIIGRILEDGIDPD+PGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHIIVWENAR
Sbjct: 400 WTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENAR 459

Query: 301 SPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHY 360
           SPAPNEGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHY
Sbjct: 460 SPAPNEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHY 519

Query: 361 VKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420
           VKARKLQNPNDPS+FHCD PLQKVFGEDK+KFTMVSQRISQHLFPPQPIHLEHKIKLSGN
Sbjct: 520 VKARKLQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 579

Query: 421 NPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFL 480
           +P  TACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTA++KIHEHRRRRAFFL
Sbjct: 580 SPVGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFL 639

Query: 481 GFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMA 540
           GFSQSPVEFIDALIDSQSKD+K+LAGE SRN EKE RSDFF+QPWVEDAVIRYIN+KP A
Sbjct: 640 GFSQSPVEFIDALIDSQSKDLKLLAGEGSRNPEKERRSDFFHQPWVEDAVIRYINQKPTA 699

[Close]

BLAST of Sed0024211 vs. NCBI nr
Match: XP_022156506.1 (SWI/SNF complex component SNF12 homolog [Momordica charantia])

HSP 1 Score: 968.0 bits (2501), Expect = 3.4e-278
Identity = 495/548 (90.33%), Postives = 515/548 (93.98%), Query Frame = 0


Query: 1   MSMNNNNNQQKSLGGAS---FGNSGMVPPSMAANPTFS----QSQLGAGFQTPYQLTPAQ 60
           MSM NNNN  KSLG AS   FGNSG+VPPSMAAN TFS    Q QLGAGFQTP+QL+PAQ
Sbjct: 1   MSM-NNNNPPKSLGAASSSPFGNSGIVPPSMAANSTFSQPQAQPQLGAGFQTPFQLSPAQ 60

Query: 61  ALAQAQLKA--HAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLT 120
           A AQAQLKA  HAQAQAQAAHAQFQAQLQAQGL+LT S TVGGGNM GSP  GFSTPGL 
Sbjct: 61  AFAQAQLKAQVHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNM-GSPSPGFSTPGLA 120

Query: 121 GMKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALY 180
           G+KRIPQKPPVRPPILSP+T +SPLKTME+TPAARKKKQKLPEKQLQDKVAAILPESALY
Sbjct: 121 GVKRIPQKPPVRPPILSPSTTFSPLKTMEITPAARKKKQKLPEKQLQDKVAAILPESALY 180

Query: 181 TQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPT 240
           TQLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVN + K PNADPPT
Sbjct: 181 TQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPT 240

Query: 241 WTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR 300
           WTLKIIGRILEDGIDPD+P VVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR
Sbjct: 241 WTLKIIGRILEDGIDPDHPSVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR 300

Query: 301 SPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHY 360
           SPAP+EGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHY
Sbjct: 301 SPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHY 360

Query: 361 VKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420
           VKARKLQNPNDPS FHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN
Sbjct: 361 VKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420

Query: 421 NPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFL 480
           +PA TACYDVLVDVPFPIHRELSALLANAEKNKEID+CDEAICTA++KIHEHRRRRAFFL
Sbjct: 421 SPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDSCDEAICTAIRKIHEHRRRRAFFL 480

Query: 481 GFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMA 540
           GFSQSPVEFIDALI+SQSKD+K+LAGEASRNAEKE RSDFFNQPWVEDAVIRYINRKP  
Sbjct: 481 GFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPTT 540

[Close]

BLAST of Sed0024211 vs. NCBI nr
Match: XP_022928298.1 (SWI/SNF complex component SNF12 homolog [Cucurbita moschata])

HSP 1 Score: 965.3 bits (2494), Expect = 2.2e-277
Identity = 489/548 (89.23%), Postives = 516/548 (94.16%), Query Frame = 0


Query: 1   MSMN--NNNNQQKSLGGAS---FGNSGMVPPSMAANPTF----SQSQLGAGFQTPYQLTP 60
           MSMN  NNNN  KSLGG S   FGNSG++PPSMAAN +F    +QSQLGAGFQTP+QLTP
Sbjct: 1   MSMNNMNNNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTP 60

Query: 61  AQALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLT 120
           AQALAQAQLKAHAQAQAQAAHAQFQA LQAQGL+LT S  +GGGNM GSPLQGFSTPGL 
Sbjct: 61  AQALAQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQGIGGGNM-GSPLQGFSTPGLA 120

Query: 121 GMKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALY 180
           G+KRIPQKPPVRPPILSPAT +SPL+TMELTPAARKKKQKLPEKQLQ+KVAAILPESALY
Sbjct: 121 GVKRIPQKPPVRPPILSPATPFSPLRTMELTPAARKKKQKLPEKQLQEKVAAILPESALY 180

Query: 181 TQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPT 240
           TQLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNT ANQVN + + PNADPPT
Sbjct: 181 TQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTSANQVNTIPRKPNADPPT 240

Query: 241 WTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR 300
           WTLKIIGRILEDGIDPD+PGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHIIVWENAR
Sbjct: 241 WTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENAR 300

Query: 301 SPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHY 360
           SPAPNEGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHY
Sbjct: 301 SPAPNEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHY 360

Query: 361 VKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420
           VKARKLQNPNDPS+FHCD PLQKVFGEDK+KFTMVSQRISQHLFPPQPIHLEHKIKLSGN
Sbjct: 361 VKARKLQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420

Query: 421 NPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFL 480
           +P  TACYDVLVDVPFPIHRELSALLANAEKNKEI+ACDEAICTA++KIHEHRRRRAFFL
Sbjct: 421 SPVGTACYDVLVDVPFPIHRELSALLANAEKNKEINACDEAICTAIRKIHEHRRRRAFFL 480

Query: 481 GFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMA 540
           GFSQSPVEFIDALIDSQSKD+K+LAGE SRN EKE RSDFF+QPWVEDAVIRYIN+KP A
Sbjct: 481 GFSQSPVEFIDALIDSQSKDLKLLAGEGSRNPEKERRSDFFHQPWVEDAVIRYINQKPTA 540

[Close]

BLAST of Sed0024211 vs. ExPASy Swiss-Prot
Match: Q9FMT4 (SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14170 PE=1 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 1.5e-225
Identity = 400/539 (74.21%), Postives = 457/539 (84.79%), Query Frame = 0


Query: 5   NNNNQQKSLGGA--SFGNSGMVPPSMAANPTFSQSQLGAGFQTPYQLTPAQALAQAQLKA 64
           NNNN QK  G A   FGN GM   S+  N  F+QS + A FQ  +Q + AQAL      A
Sbjct: 4   NNNNPQKPQGSAPLPFGNPGMASASVPGNQGFAQSHMAANFQAQFQFSQAQAL------A 63

Query: 65  HAQAQAQAAHAQFQAQLQAQGLTLTPS-GTVGGGNMGGSPLQGFSTPGLTGMKRIPQKPP 124
           HAQAQ++   AQ QAQLQAQG+T+  + G+ G G +G S     +TPG   MKR  QKPP
Sbjct: 64  HAQAQSK-VQAQLQAQLQAQGMTMNQAQGSPGIGGLGPSS-PSLTTPGSLNMKRFQQKPP 123

Query: 125 VRPPILSPAT--AYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFES 184
           +RPP  +PA+    SP++TMELTPAARKKKQKLPEK LQ++VAAILPESALYTQLLEFES
Sbjct: 124 MRPP-GAPASNNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQLLEFES 183

Query: 185 RVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPTWTLKIIGR 244
           RVDAAL+RKKVDI EALKNPPCIQKTLRIYVFN+FANQ N +  NPNADPPTWTLKIIGR
Sbjct: 184 RVDAALTRKKVDIQEALKNPPCIQKTLRIYVFNSFANQNNTIPGNPNADPPTWTLKIIGR 243

Query: 245 ILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPAPNEGF 304
           ILEDG+DPD PG VQ++NPL+PKFSSFFKRVT+SLDQRLYP++ +I+WENARSPAP EGF
Sbjct: 244 ILEDGVDPDQPGFVQKANPLHPKFSSFFKRVTVSLDQRLYPENPLIIWENARSPAPQEGF 303

Query: 305 EVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQN 364
           E+KRKG++EF  +IRLEMNY+PEKFKLS AL +VLGIEV+TRPRIIAAIWHYVKARKLQN
Sbjct: 304 EIKRKGNQEFAASIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQN 363

Query: 365 PNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNNPAATACY 424
           PNDPS F+CD  LQKVFGE+KLKFTMVSQ+IS HL PP PIHLEHKIKLSGNNPA +ACY
Sbjct: 364 PNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAVSACY 423

Query: 425 DVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFLGFSQSPVE 484
           DVLVDVPFPI R+L+ LLANAEKNKEI+ACDEAIC A++KIHEHRRRRAFFLGFSQSPVE
Sbjct: 424 DVLVDVPFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVE 483

Query: 485 FIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMAGSDAPGS 539
           FI+ALI+SQSKD+K++AGEASRNAE+E RSDFFNQPWVEDAVIRY+NR+P AG+D PGS
Sbjct: 484 FINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNDGPGS 533

[Close]

BLAST of Sed0024211 vs. ExPASy Swiss-Prot
Match: Q9VYG2 (Brahma-associated protein of 60 kDa OS=Drosophila melanogaster OX=7227 GN=Bap60 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.0e-75
Identity = 147/386 (38.08%), Postives = 223/386 (57.77%), Query Frame = 0


Query: 144 AARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALSRKKVDIHEALKNPPCIQ 203
           A  KKK+KL EK L  KV  ++PES  Y  LL FE ++DA + RK++DI EALK P   +
Sbjct: 122 ATAKKKKKLAEKILPQKVRDLVPESQAYMDLLTFERKLDATIMRKRLDIQEALKRPMKQK 181

Query: 204 KTLRIYVFNTFANQVNAMTKNPNADPPTWTLKIIGRILEDGIDPDNPGVVQRSNPLYPKF 263
           + LRI++ NTF                +W L++ GR+LEDG    N  + +       KF
Sbjct: 182 RKLRIFISNTFYPSKEPTNDGEEGAVASWELRVEGRLLEDGKGDPNTKIKR-------KF 241

Query: 264 SSFFKRVTISLDQRLY-PDSHIIVWENARSPAPNEGFEVKRKGDKEFTVNIRLEMNYIPE 323
           SSFFK + I LD+ LY PD+H++ W    +    +GF+VKR GD+     I L ++Y P 
Sbjct: 242 SSFFKSLVIELDKELYGPDNHLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQPL 301

Query: 324 KFKLSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVFGEDKLK 383
           +FKL P L  +LG+   TRP II+A+W Y+K  KLQ+ ++    +CD  L+++F   ++K
Sbjct: 302 QFKLDPRLARLLGVHTQTRPVIISALWQYIKTHKLQDAHEREYINCDKYLEQIFSCQRMK 361

Query: 384 FTMVSQRISQHLFPPQPIHLEHKIKLSGNNPAATACYDVLVDVPFPIHRELSALLANAEK 443
           F  + QR++  L PP PI + H I+ SG     TACYD+ V+V   +  ++++ L +   
Sbjct: 362 FAEIPQRLNPLLHPPDPIVINHFIE-SGAENKQTACYDIDVEVDDTLKNQMNSFLMSTAS 421

Query: 444 NKEIDACDEAICTAVKKIHEHRRRRAFFLGFSQSPVEFIDALIDSQSKDIKILAGEASRN 503
            +EI   D  I   V  I++ +  R FFL F++ P  FI   I S+++D+K++  + + N
Sbjct: 422 QQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQMFIHRWIISETRDLKLMT-DVAGN 481

Query: 504 AEKEHRSDFFNQPWVEDAVIRYINRK 529
            E+E R++F+ QPW  +AV RY   K
Sbjct: 482 PEEERRAEFYYQPWTHEAVSRYFFTK 498

[Close]

BLAST of Sed0024211 vs. ExPASy Swiss-Prot
Match: Q96GM5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Homo sapiens OX=9606 GN=SMARCD1 PE=1 SV=2)

HSP 1 Score: 276.6 bits (706), Expect = 6.1e-73
Identity = 169/504 (33.53%), Postives = 261/504 (51.79%), Query Frame = 0


Query: 70  AAHAQFQAQLQAQG----------LTLTPSGTVGGG-NMGGSPLQG----------FSTP 129
           AA A FQ+   + G            L P GT G    MG +P QG          +  P
Sbjct: 2   AARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRP 61

Query: 130 G-LTGMKRIPQKPPVRP------PILSPATAYSPLKTMELTPAARK-------------- 189
           G L G +  PQ P + P      P + P  A S +      PA ++              
Sbjct: 62  GMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNH 121

Query: 190 --KKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALSRKKVDIHEALKNPPCIQKT 249
             KK+K+ +K L  ++  ++PES  Y  LL FE ++D  + RK++DI EALK P   ++ 
Sbjct: 122 NAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK 181

Query: 250 LRIYVFNTFANQVNAMTKNPNADPPTWTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSS 309
           LRI++ NTF N   +  ++      +W L++ GR+LED          Q+      KFSS
Sbjct: 182 LRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR-----KFSS 241

Query: 310 FFKRVTISLDQRLY-PDSHIIVWENARSPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKF 369
           FFK + I LD+ LY PD+H++ W    +    +GF+VKR GD      + L ++Y P +F
Sbjct: 242 FFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQF 301

Query: 370 KLSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFT 429
           KL P L  +LGI   TRP II A+W Y+K  KLQ+P++     CD  LQ++F   ++KF+
Sbjct: 302 KLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFS 361

Query: 430 MVSQRISQHLFPPQPIHLEHKIKLSGNNPAATACYDVLVDVPFPIHRELSALLANAEKNK 489
            + QR+   L PP+PI + H I +  N+   TACYD+ V+V   +  ++++ L +    +
Sbjct: 362 EIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQ 421

Query: 490 EIDACDEAICTAVKKIHEHRRRRAFFLGFSQSPVEFIDALIDSQSKDIKILAGEASRNAE 529
           EI   D  I   ++ I++ + +R F L F++ P  FI+  + SQ +D+K +  +   N E
Sbjct: 422 EIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMT-DVVGNPE 481

[Close]

BLAST of Sed0024211 vs. ExPASy Swiss-Prot
Match: Q61466 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Mus musculus OX=10090 GN=Smarcd1 PE=1 SV=3)

HSP 1 Score: 276.6 bits (706), Expect = 6.1e-73
Identity = 169/504 (33.53%), Postives = 261/504 (51.79%), Query Frame = 0


Query: 70  AAHAQFQAQLQAQG----------LTLTPSGTVGGG-NMGGSPLQG----------FSTP 129
           AA A FQ+   + G            L P GT G    MG +P QG          +  P
Sbjct: 2   AARAGFQSVAPSGGAGASGGAGVAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRP 61

Query: 130 G-LTGMKRIPQKPPVRP------PILSPATAYSPLKTMELTPAARK-------------- 189
           G L G +  PQ P + P      P + P  A S +      PA ++              
Sbjct: 62  GMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNH 121

Query: 190 --KKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALSRKKVDIHEALKNPPCIQKT 249
             KK+K+ +K L  ++  ++PES  Y  LL FE ++D  + RK++DI EALK P   ++ 
Sbjct: 122 NAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK 181

Query: 250 LRIYVFNTFANQVNAMTKNPNADPPTWTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSS 309
           LRI++ NTF N   +  ++      +W L++ GR+LED          Q+      KFSS
Sbjct: 182 LRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDAALSKYDATKQKR-----KFSS 241

Query: 310 FFKRVTISLDQRLY-PDSHIIVWENARSPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKF 369
           FFK + I LD+ LY PD+H++ W    +    +GF+VKR GD      + L ++Y P +F
Sbjct: 242 FFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQF 301

Query: 370 KLSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFT 429
           KL P L  +LGI   TRP II A+W Y+K  KLQ+P++     CD  LQ++F   ++KF+
Sbjct: 302 KLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFS 361

Query: 430 MVSQRISQHLFPPQPIHLEHKIKLSGNNPAATACYDVLVDVPFPIHRELSALLANAEKNK 489
            + QR+   L PP+PI + H I +  N+   TACYD+ V+V   +  ++++ L +    +
Sbjct: 362 EIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQ 421

Query: 490 EIDACDEAICTAVKKIHEHRRRRAFFLGFSQSPVEFIDALIDSQSKDIKILAGEASRNAE 529
           EI   D  I   ++ I++ + +R F L F++ P  FI+  + SQ +D+K +  +   N E
Sbjct: 422 EIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMT-DVVGNPE 481

[Close]

BLAST of Sed0024211 vs. ExPASy Swiss-Prot
Match: Q2TBN1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Bos taurus OX=9913 GN=SMARCD1 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.0e-72
Identity = 168/504 (33.33%), Postives = 262/504 (51.98%), Query Frame = 0


Query: 70  AAHAQFQAQLQAQG----------LTLTPSGTVGGG-NMGGSPLQG----------FSTP 129
           AA A FQ+   + G            L P GT G    MG +P QG          +  P
Sbjct: 2   AARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRP 61

Query: 130 G-LTGMKRIPQKPPVRP------PILSPATAYSPLKTMELTPAARK-------------- 189
           G L G +  PQ P + P      P + P  A S +      PA ++              
Sbjct: 62  GMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSLKRPAPQQIKQVQQQAVQNRNH 121

Query: 190 --KKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALSRKKVDIHEALKNPPCIQKT 249
             KK+K+ +K L  ++  ++PES  Y  LL FE ++D  + RK++DI EALK P   ++ 
Sbjct: 122 NAKKKKMADKILPQRIRELVPESQDYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK 181

Query: 250 LRIYVFNTFANQVNAMTKNPNADPPTWTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSS 309
           LRI++ NTF N   +  ++      +W L++ GR+LED          Q+      KFSS
Sbjct: 182 LRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR-----KFSS 241

Query: 310 FFKRVTISLDQRLY-PDSHIIVWENARSPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKF 369
           FFK + I LD+ LY PD+H++ W    +    +GF+VKR GD      + L ++Y P +F
Sbjct: 242 FFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQF 301

Query: 370 KLSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFT 429
           KL P L  +LGI   TRP II A+W Y+K  KLQ+P++     CD  LQ++F   ++KF+
Sbjct: 302 KLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFS 361

Query: 430 MVSQRISQHLFPPQPIHLEHKIKLSGNNPAATACYDVLVDVPFPIHRELSALLANAEKNK 489
            + QR+   L PP+PI + H I +  N+   TACYD+  +V   +  ++++ L +    +
Sbjct: 362 EIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDEEVDDTLKTQMNSFLLSTASQQ 421

Query: 490 EIDACDEAICTAVKKIHEHRRRRAFFLGFSQSPVEFIDALIDSQSKDIKILAGEASRNAE 529
           EI   D  I   ++ I++ + +R F L F++ P  FI+  + SQ +D+K++  +   N+E
Sbjct: 422 EIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKVMT-DVVGNSE 481

[Close]

BLAST of Sed0024211 vs. ExPASy TrEMBL
Match: A0A6J1JMV8 (SWI/SNF complex component SNF12 homolog OS=Cucurbita maxima OX=3661 GN=LOC111486650 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 6.6e-280
Identity = 492/547 (89.95%), Postives = 517/547 (94.52%), Query Frame = 0


Query: 1   MSMNN-NNNQQKSLGGAS---FGNSGMVPPSMAANPTF----SQSQLGAGFQTPYQLTPA 60
           MSMNN NNN  KSLGG S   FGNSG++PPSMAAN +F    +QSQLGAGFQTP+QLTPA
Sbjct: 6   MSMNNINNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTPA 65

Query: 61  QALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLTG 120
           QALAQAQLKAHAQAQAQAAHAQFQA LQAQGL+LT S  +GGGNM GSPLQGFSTPGL G
Sbjct: 66  QALAQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQAIGGGNM-GSPLQGFSTPGLAG 125

Query: 121 MKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT 180
           +KRIPQKPPVRPPILSPAT +SPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT
Sbjct: 126 VKRIPQKPPVRPPILSPATPFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT 185

Query: 181 QLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPTW 240
           QLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVN + + PNADPPTW
Sbjct: 186 QLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPRKPNADPPTW 245

Query: 241 TLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARS 300
           TLKIIGRILEDGIDPD+PGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHIIVWENARS
Sbjct: 246 TLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENARS 305

Query: 301 PAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHYV 360
           PAPNEGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHYV
Sbjct: 306 PAPNEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV 365

Query: 361 KARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNN 420
           KARKLQNPNDPS+FHCD PLQKVFGEDK+KFTMVSQRISQHLFPPQPIHLEHKIKLSGN+
Sbjct: 366 KARKLQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGNS 425

Query: 421 PAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFLG 480
           P  TACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTA++KIHEHRRRRAFFLG
Sbjct: 426 PVGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLG 485

Query: 481 FSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMAG 540
           FSQSPVEFIDALIDSQSKD+K+LAGE SRN EKE RSDFF+QPWVEDAVIRYIN+KP AG
Sbjct: 486 FSQSPVEFIDALIDSQSKDLKLLAGEGSRNPEKERRSDFFHQPWVEDAVIRYINQKPTAG 545

[Close]

BLAST of Sed0024211 vs. ExPASy TrEMBL
Match: A0A6J1DV59 (SWI/SNF complex component SNF12 homolog OS=Momordica charantia OX=3673 GN=LOC111023389 PE=4 SV=1)

HSP 1 Score: 968.0 bits (2501), Expect = 1.6e-278
Identity = 495/548 (90.33%), Postives = 515/548 (93.98%), Query Frame = 0


Query: 1   MSMNNNNNQQKSLGGAS---FGNSGMVPPSMAANPTFS----QSQLGAGFQTPYQLTPAQ 60
           MSM NNNN  KSLG AS   FGNSG+VPPSMAAN TFS    Q QLGAGFQTP+QL+PAQ
Sbjct: 1   MSM-NNNNPPKSLGAASSSPFGNSGIVPPSMAANSTFSQPQAQPQLGAGFQTPFQLSPAQ 60

Query: 61  ALAQAQLKA--HAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLT 120
           A AQAQLKA  HAQAQAQAAHAQFQAQLQAQGL+LT S TVGGGNM GSP  GFSTPGL 
Sbjct: 61  AFAQAQLKAQVHAQAQAQAAHAQFQAQLQAQGLSLTQSQTVGGGNM-GSPSPGFSTPGLA 120

Query: 121 GMKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALY 180
           G+KRIPQKPPVRPPILSP+T +SPLKTME+TPAARKKKQKLPEKQLQDKVAAILPESALY
Sbjct: 121 GVKRIPQKPPVRPPILSPSTTFSPLKTMEITPAARKKKQKLPEKQLQDKVAAILPESALY 180

Query: 181 TQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPT 240
           TQLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVN + K PNADPPT
Sbjct: 181 TQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPT 240

Query: 241 WTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR 300
           WTLKIIGRILEDGIDPD+P VVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR
Sbjct: 241 WTLKIIGRILEDGIDPDHPSVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR 300

Query: 301 SPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHY 360
           SPAP+EGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHY
Sbjct: 301 SPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHY 360

Query: 361 VKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420
           VKARKLQNPNDPS FHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN
Sbjct: 361 VKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420

Query: 421 NPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFL 480
           +PA TACYDVLVDVPFPIHRELSALLANAEKNKEID+CDEAICTA++KIHEHRRRRAFFL
Sbjct: 421 SPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDSCDEAICTAIRKIHEHRRRRAFFL 480

Query: 481 GFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMA 540
           GFSQSPVEFIDALI+SQSKD+K+LAGEASRNAEKE RSDFFNQPWVEDAVIRYINRKP  
Sbjct: 481 GFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPTT 540

[Close]

BLAST of Sed0024211 vs. ExPASy TrEMBL
Match: A0A6J1ENL0 (SWI/SNF complex component SNF12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111435165 PE=4 SV=1)

HSP 1 Score: 965.3 bits (2494), Expect = 1.1e-277
Identity = 489/548 (89.23%), Postives = 516/548 (94.16%), Query Frame = 0


Query: 1   MSMN--NNNNQQKSLGGAS---FGNSGMVPPSMAANPTF----SQSQLGAGFQTPYQLTP 60
           MSMN  NNNN  KSLGG S   FGNSG++PPSMAAN +F    +QSQLGAGFQTP+QLTP
Sbjct: 1   MSMNNMNNNNPPKSLGGVSSSPFGNSGIIPPSMAANSSFPQPQAQSQLGAGFQTPFQLTP 60

Query: 61  AQALAQAQLKAHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLT 120
           AQALAQAQLKAHAQAQAQAAHAQFQA LQAQGL+LT S  +GGGNM GSPLQGFSTPGL 
Sbjct: 61  AQALAQAQLKAHAQAQAQAAHAQFQAHLQAQGLSLTQSQGIGGGNM-GSPLQGFSTPGLA 120

Query: 121 GMKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALY 180
           G+KRIPQKPPVRPPILSPAT +SPL+TMELTPAARKKKQKLPEKQLQ+KVAAILPESALY
Sbjct: 121 GVKRIPQKPPVRPPILSPATPFSPLRTMELTPAARKKKQKLPEKQLQEKVAAILPESALY 180

Query: 181 TQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPT 240
           TQLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNT ANQVN + + PNADPPT
Sbjct: 181 TQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTSANQVNTIPRKPNADPPT 240

Query: 241 WTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENAR 300
           WTLKIIGRILEDGIDPD+PGVVQRSNPLYPKFS+FFKRVTISLDQRLYPDSHIIVWENAR
Sbjct: 241 WTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSAFFKRVTISLDQRLYPDSHIIVWENAR 300

Query: 301 SPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHY 360
           SPAPNEGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHY
Sbjct: 301 SPAPNEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHY 360

Query: 361 VKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420
           VKARKLQNPNDPS+FHCD PLQKVFGEDK+KFTMVSQRISQHLFPPQPIHLEHKIKLSGN
Sbjct: 361 VKARKLQNPNDPSIFHCDQPLQKVFGEDKMKFTMVSQRISQHLFPPQPIHLEHKIKLSGN 420

Query: 421 NPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFL 480
           +P  TACYDVLVDVPFPIHRELSALLANAEKNKEI+ACDEAICTA++KIHEHRRRRAFFL
Sbjct: 421 SPVGTACYDVLVDVPFPIHRELSALLANAEKNKEINACDEAICTAIRKIHEHRRRRAFFL 480

Query: 481 GFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMA 540
           GFSQSPVEFIDALIDSQSKD+K+LAGE SRN EKE RSDFF+QPWVEDAVIRYIN+KP A
Sbjct: 481 GFSQSPVEFIDALIDSQSKDLKLLAGEGSRNPEKERRSDFFHQPWVEDAVIRYINQKPTA 540

[Close]

BLAST of Sed0024211 vs. ExPASy TrEMBL
Match: A0A6J1F9A1 (SWI/SNF complex component SNF12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111441979 PE=4 SV=1)

HSP 1 Score: 959.9 bits (2480), Expect = 4.5e-276
Identity = 490/546 (89.74%), Postives = 509/546 (93.22%), Query Frame = 0


Query: 1   MSMNNNNNQQKSLGGAS---FGNSGMVPPSMAANPTFS--QSQLGAGFQTPYQLTPAQAL 60
           MSM NNNN  KSLGG S   +GNSG+VPPSMAAN TFS  Q+QLGAGFQ P+QL+PAQ L
Sbjct: 1   MSM-NNNNPPKSLGGTSSSPYGNSGIVPPSMAANATFSQPQAQLGAGFQNPFQLSPAQVL 60

Query: 61  AQAQLK--AHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGLTGM 120
           AQA LK  AHAQAQAQA HAQFQAQLQAQGL+L+ S  VGGGNM GSP  GFSTPGL G 
Sbjct: 61  AQATLKAHAHAQAQAQAVHAQFQAQLQAQGLSLSQSQNVGGGNM-GSPSPGFSTPGLAGA 120

Query: 121 KRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180
           KRIPQKPPVRPPILSP T +SPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ
Sbjct: 121 KRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQ 180

Query: 181 LLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPTWT 240
           LLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVN + K PNADPPTWT
Sbjct: 181 LLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWT 240

Query: 241 LKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSP 300
           LKIIGRILEDGIDPD+PGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSP
Sbjct: 241 LKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSP 300

Query: 301 APNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHYVK 360
           AP+EGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWHYVK
Sbjct: 301 APHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVK 360

Query: 361 ARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNNP 420
           ARKLQNPNDPS FHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGN+P
Sbjct: 361 ARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNSP 420

Query: 421 AATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFLGF 480
           A TACYDVLVDVPFPIHRELSALLANAEKNKEID CDEAICTA++KIHEHRRRRAFFLGF
Sbjct: 421 AGTACYDVLVDVPFPIHRELSALLANAEKNKEIDTCDEAICTAIRKIHEHRRRRAFFLGF 480

Query: 481 SQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMAGS 540
           SQSPVEFIDALI+SQ KD+K+LAGEASRNAEKE RSDFFNQPWVEDAVIRYINRKP AGS
Sbjct: 481 SQSPVEFIDALIESQGKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPTAGS 540

[Close]

BLAST of Sed0024211 vs. ExPASy TrEMBL
Match: A0A0A0LB48 (SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585900 PE=4 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 7.6e-276
Identity = 493/549 (89.80%), Postives = 512/549 (93.26%), Query Frame = 0


Query: 1   MSMNNNNNQQKSLGGAS---FGNSGMVPPSMAANPT-FS----QSQLGAGFQTPYQLTPA 60
           MSM NNNN  K+LGGAS   FGNSGMVPPSMAAN T FS    Q+QLGAGFQ P+ LT A
Sbjct: 1   MSM-NNNNPPKTLGGASSSPFGNSGMVPPSMAANSTSFSQPQPQAQLGAGFQNPFPLTTA 60

Query: 61  QALAQAQLK--AHAQAQAQAAHAQFQAQLQAQGLTLTPSGTVGGGNMGGSPLQGFSTPGL 120
           Q LAQAQ K  AHAQAQAQAAHAQFQAQLQAQGL+LT S  VGGGN+ GSP  GFSTPGL
Sbjct: 61  QVLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNV-GSPSPGFSTPGL 120

Query: 121 TGMKRIPQKPPVRPPILSPATAYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESAL 180
            G+KRIPQKPPVRPPILSP T +SPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESAL
Sbjct: 121 AGVKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESAL 180

Query: 181 YTQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPP 240
           YTQLLEFESRVDAAL+RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVN + K PNADPP
Sbjct: 181 YTQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPP 240

Query: 241 TWTLKIIGRILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENA 300
           TWTLKIIGRILEDGIDPD+PGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENA
Sbjct: 241 TWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENA 300

Query: 301 RSPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWH 360
           RSPAP+EGFEVKRKGDKEF+VNIRLEMNYIPEKFKLSPAL EVLGIEVDTRPRIIAAIWH
Sbjct: 301 RSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWH 360

Query: 361 YVKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSG 420
           YVKARKLQNPNDPS FHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHK+KLSG
Sbjct: 361 YVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSG 420

Query: 421 NNPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFF 480
           N+PA TACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTA++KIHEHRRRRAFF
Sbjct: 421 NSPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFF 480

Query: 481 LGFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPM 540
           LGFSQSPVEFIDALI+SQSKD+K+LAGEASRNAEKE RSDFFNQPWVEDAVIRYINRKP 
Sbjct: 481 LGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPA 540

[Close]

BLAST of Sed0024211 vs. TAIR 10
Match: AT5G14170.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 783.5 bits (2022), Expect = 1.1e-226
Identity = 400/539 (74.21%), Postives = 457/539 (84.79%), Query Frame = 0


Query: 5   NNNNQQKSLGGA--SFGNSGMVPPSMAANPTFSQSQLGAGFQTPYQLTPAQALAQAQLKA 64
           NNNN QK  G A   FGN GM   S+  N  F+QS + A FQ  +Q + AQAL      A
Sbjct: 4   NNNNPQKPQGSAPLPFGNPGMASASVPGNQGFAQSHMAANFQAQFQFSQAQAL------A 63

Query: 65  HAQAQAQAAHAQFQAQLQAQGLTLTPS-GTVGGGNMGGSPLQGFSTPGLTGMKRIPQKPP 124
           HAQAQ++   AQ QAQLQAQG+T+  + G+ G G +G S     +TPG   MKR  QKPP
Sbjct: 64  HAQAQSK-VQAQLQAQLQAQGMTMNQAQGSPGIGGLGPSS-PSLTTPGSLNMKRFQQKPP 123

Query: 125 VRPPILSPAT--AYSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFES 184
           +RPP  +PA+    SP++TMELTPAARKKKQKLPEK LQ++VAAILPESALYTQLLEFES
Sbjct: 124 MRPP-GAPASNNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQLLEFES 183

Query: 185 RVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNAMTKNPNADPPTWTLKIIGR 244
           RVDAAL+RKKVDI EALKNPPCIQKTLRIYVFN+FANQ N +  NPNADPPTWTLKIIGR
Sbjct: 184 RVDAALTRKKVDIQEALKNPPCIQKTLRIYVFNSFANQNNTIPGNPNADPPTWTLKIIGR 243

Query: 245 ILEDGIDPDNPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPAPNEGF 304
           ILEDG+DPD PG VQ++NPL+PKFSSFFKRVT+SLDQRLYP++ +I+WENARSPAP EGF
Sbjct: 244 ILEDGVDPDQPGFVQKANPLHPKFSSFFKRVTVSLDQRLYPENPLIIWENARSPAPQEGF 303

Query: 305 EVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQN 364
           E+KRKG++EF  +IRLEMNY+PEKFKLS AL +VLGIEV+TRPRIIAAIWHYVKARKLQN
Sbjct: 304 EIKRKGNQEFAASIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQN 363

Query: 365 PNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKIKLSGNNPAATACY 424
           PNDPS F+CD  LQKVFGE+KLKFTMVSQ+IS HL PP PIHLEHKIKLSGNNPA +ACY
Sbjct: 364 PNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAVSACY 423

Query: 425 DVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKKIHEHRRRRAFFLGFSQSPVE 484
           DVLVDVPFPI R+L+ LLANAEKNKEI+ACDEAIC A++KIHEHRRRRAFFLGFSQSPVE
Sbjct: 424 DVLVDVPFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVE 483

Query: 485 FIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVEDAVIRYINRKPMAGSDAPGS 539
           FI+ALI+SQSKD+K++AGEASRNAE+E RSDFFNQPWVEDAVIRY+NR+P AG+D PGS
Sbjct: 484 FINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNDGPGS 533

[Close]

BLAST of Sed0024211 vs. TAIR 10
Match: AT3G01890.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 611.7 bits (1576), Expect = 5.7e-175
Identity = 307/433 (70.90%), Postives = 353/433 (81.52%), Query Frame = 0


Query: 103 QGFSTPGLTGMKRIPQKPPV-RPPILSPATAYSPLKTMELTPAARKKKQKLPEK-QLQDK 162
           QG S PG    +R P KPP+  PP + P        +MELTPA+RKKK KLP+K  LQ++
Sbjct: 48  QGISAPG----RRFPHKPPIGGPPAVPP--------SMELTPASRKKKHKLPDKSSLQER 107

Query: 163 VAAILPESALYTQLLEFESRVDAALSRKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNA 222
           VAA+LPESALYTQLLEFESRVDAAL RKKVDI ++LKNPP IQKTLRIYVFNTF+NQ+  
Sbjct: 108 VAAVLPESALYTQLLEFESRVDAALFRKKVDIQDSLKNPPSIQKTLRIYVFNTFSNQI-- 167

Query: 223 MTKNPNADPPTWTLKIIGRILEDGIDPDNP-GVVQRSNPLYPKFSSFFKRVTISLDQRLY 282
               P  DPPTWTL+I GR+L    DPD+  G+VQ SNPLYPKFSSFFK + ISLDQ LY
Sbjct: 168 ----PGPDPPTWTLRIFGRVL----DPDHTGGLVQNSNPLYPKFSSFFKTLKISLDQSLY 227

Query: 283 PDSHIIVWENARSPAPNEGFEVKRKGDKEFTVNIRLEMNYIPEKFKLSPALTEVLGIEVD 342
           P++H+I W+  RSPAP EGFE+KR G +EF   I LEMNY+PEKFK SPAL +VLGIEVD
Sbjct: 228 PENHLIEWKRDRSPAPLEGFEIKRIGCQEFAATILLEMNYVPEKFKTSPALMQVLGIEVD 287

Query: 343 TRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQP 402
           TRPRIIAAIWHYVK RKLQNPNDPS F+CD  L  VFGE+K+KFTM+S +ISQHL PP P
Sbjct: 288 TRPRIIAAIWHYVKVRKLQNPNDPSFFNCDAALHSVFGEEKMKFTMLSHKISQHLSPPPP 347

Query: 403 IHLEHKIKLSGNNPAATACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAVKK 462
           I L HKIKLSGNNPA +ACYDVLVD+P P+  ELS LLAN EKNKEI+ACDEAIC A++K
Sbjct: 348 IQLVHKIKLSGNNPAISACYDVLVDIPAPVQTELSNLLANPEKNKEIEACDEAICGAIRK 407

Query: 463 IHEHRRRRAFFLGFSQSPVEFIDALIDSQSKDIKILAGEASRNAEKEHRSDFFNQPWVED 522
           IHEHRRRRAFFLGFSQSPVEF +AL++SQ+KD+K++AGEASRNAEKE RS+FFNQPWVED
Sbjct: 408 IHEHRRRRAFFLGFSQSPVEFTNALMESQTKDLKLVAGEASRNAEKEGRSEFFNQPWVED 458

Query: 523 AVIRYINRKPMAG 533
           A IRY+NRKP  G
Sbjct: 468 AAIRYLNRKPAGG 458

[Close]

BLAST of Sed0024211 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-07
Identity = 27/69 (39.13%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 326 LSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVF-GEDKLKFT 385
           +SP L + LG    +R   I  IW Y+K+  LQNP D     CD  L+ +F G+DK+ F 
Sbjct: 70  VSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFL 129

Query: 386 MVSQRISQH 394
            +S+ +S H
Sbjct: 130 EISKLLSPH 138

[Close]

BLAST of Sed0024211 vs. TAIR 10
Match: AT3G19080.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 52.4 bits (124), Expect = 1.3e-06
Identity = 19/71 (26.76%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 326 LSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTM 385
           LSP L    G+    R  ++  +W Y+K   LQ+PND     CD   + +F  + +    
Sbjct: 270 LSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDESFRSLFPVESINMFQ 329

Query: 386 VSQRISQHLFP 397
           +++++++H++P
Sbjct: 330 MNKQLTKHIWP 340

[Close]

BLAST of Sed0024211 vs. TAIR 10
Match: AT1G49520.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 3.9e-06
Identity = 19/71 (26.76%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 326 LSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSLFHCDPPLQKVFGEDKLKFTM 385
           LSP L    G     R  ++  +W Y+K   LQ+P+D     CD  L+ +F  + +    
Sbjct: 257 LSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQ 316

Query: 386 VSQRISQHLFP 397
           +++++++H++P
Sbjct: 317 MNKQLAKHIWP 327

The following BLAST results are available for this feature:

BLAST of Sed0024211 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989619.1	1.4e-279	89.95	SWI/SNF complex component SNF12 homolog [Cucurbita maxima] >XP_022989620.1 SWI/S...	[more]
KAG7022667.1	6.8e-279	89.60	SWI/SNF complex component SNF12-like protein [Cucurbita argyrosperma subsp. argy...	[more]
KAG6588902.1	6.8e-279	89.60	SWI/SNF complex component SNF12-like protein, partial [Cucurbita argyrosperma su...	[more]
XP_022156506.1	3.4e-278	90.33	SWI/SNF complex component SNF12 homolog [Momordica charantia]	[more]
XP_022928298.1	2.2e-277	89.23	SWI/SNF complex component SNF12 homolog [Cucurbita moschata]	[more]

BLAST of Sed0024211 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMT4	1.5e-225	74.21	SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g1...	[more]
Q9VYG2	5.0e-75	38.08	Brahma-associated protein of 60 kDa OS=Drosophila melanogaster OX=7227 GN=Bap60 ...	[more]
Q96GM5	6.1e-73	33.53	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
Q61466	6.1e-73	33.53	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
Q2TBN1	3.0e-72	33.33	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]

BLAST of Sed0024211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JMV8	6.6e-280	89.95	SWI/SNF complex component SNF12 homolog OS=Cucurbita maxima OX=3661 GN=LOC111486...	[more]
A0A6J1DV59	1.6e-278	90.33	SWI/SNF complex component SNF12 homolog OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1ENL0	1.1e-277	89.23	SWI/SNF complex component SNF12 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1F9A1	4.5e-276	89.74	SWI/SNF complex component SNF12 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0LB48	7.6e-276	89.80	SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585900 PE=4 S...	[more]

BLAST of Sed0024211 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14170.1	1.1e-226	74.21	SWIB/MDM2 domain superfamily protein	[more]
AT3G01890.1	5.7e-175	70.90	SWIB/MDM2 domain superfamily protein	[more]
AT3G03590.1	1.2e-07	39.13	SWIB/MDM2 domain superfamily protein	[more]
AT3G19080.1	1.3e-06	26.76	SWIB complex BAF60b domain-containing protein	[more]
AT1G49520.1	3.9e-06	26.76	SWIB complex BAF60b domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 320..399 e-value: 3.2E-19 score: 79.9
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 323..394 e-value: 2.0E-23 score: 82.0
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 319..396 score: 23.644093
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 316..401 e-value: 1.9E-27 score: 97.1
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 314..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..107
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 88..530
None	No IPR available	PANTHER	PTHR13844:SF58	SWIB/MDM2 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 88..530
None	No IPR available	CDD	cd10568	SWIB_like	coord: 326..394 e-value: 6.6331E-30 score: 109.93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024211.1	Sed0024211.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016514	SWI/SNF complex