![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0024166 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACGGACTTCTCAAAATTTCGAAAATAAACCCCAATTTTCATATGTGTTGACACAAATCACCCAAAAAAAAGGGTAAAAAAGGAAAAAAAGAATGGCATCTTCTTCTCGGGTAGCTTTGGCATCATCAATAGCTCCTCTGCTTCGCAATCGCTCAACAAGATTCCTTCCATGCCGCAATTTCCACCATAAATGGAGCTTCACAATCGCTCATTCTGAATCTTCTCTTCTTCTTCGATCTCCTTTTCGCAATCCTCCGCCATTAATGGCCTCCACAGCTCCAGATCAGCCCGCCCCCGAGGCTCCTCCCTCGAATCCGACGAAAACTGTGAGTATTGCGCTTCGAATTTCTCCGATCGGTGCGATTTTGGACTTCTTGTGGTAATTAGGGCTTCGGAAATTGCAGGTTAGGGTTGTGATTAAAGGTAGGGTTCAGGGAGTGTTCTATCGCGACTGGACGGTGGAGAATGCTTCTCAGTTAGGGTTGAACGGATGGGTGAGGAATCGGAGAGACGGATCCGTGGAGGCGCTTTTCTCCGGCCGCCCTGACTCCGTGGCGGAGATGGAACAGCGGTGCCGCCGTGGTCCGCCGGCGGCGATGGTTACTGGTTTTCAGGTTTTTCCTTGCTCCGATCTCCCTGGGCCGGGGTTTGAGCGCGTACGGACCGCTTGATGATCGGGACGTTAGAACCAGACCGGACCGGGTGTTGAGAAAGGATTATTGGGGTTTATTTTATTAGTTTTTTTTTTTTTTTAATACATGGTGGGGAAAGGGAAACCAACAAATCCTACGTAGAGAGCACACTGCTCTCAAATAATATTAGCACTGAACTATAGCGAGAATGGAGTGGTTAATAATGACTGAAGGTCTGTTTTATACAAGTTCAAGCTTTTGATAGCATAATTATAACAACCTTTTTTTTTAAATGCAAAACTTTACTTGTGATGATGTTTTGTACTATTTACGAAAATTTATTATTTTTATGAGTGG CCACGGACTTCTCAAAATTTCGAAAATAAACCCCAATTTTCATATGTGTTGACACAAATCACCCAAAAAAAAGGGTAAAAAAGGAAAAAAAGAATGGCATCTTCTTCTCGGGTAGCTTTGGCATCATCAATAGCTCCTCTGCTTCGCAATCGCTCAACAAGATTCCTTCCATGCCGCAATTTCCACCATAAATGGAGCTTCACAATCGCTCATTCTGAATCTTCTCTTCTTCTTCGATCTCCTTTTCGCAATCCTCCGCCATTAATGGCCTCCACAGCTCCAGATCAGCCCGCCCCCGAGGCTCCTCCCTCGAATCCGACGAAAACTGTTAGGGTTGTGATTAAAGGTAGGGTTCAGGGAGTGTTCTATCGCGACTGGACGGTGGAGAATGCTTCTCAGTTAGGGTTGAACGGATGGGTGAGGAATCGGAGAGACGGATCCGTGGAGGCGCTTTTCTCCGGCCGCCCTGACTCCGTGGCGGAGATGGAACAGCGGTGCCGCCGTGGTCCGCCGGCGGCGATGGTTACTGGTTTTCAGGTTTTTCCTTGCTCCGATCTCCCTGGGCCGGGGTTTGAGCGCGTACGGACCGCTTGATGATCGGGACGTTAGAACCAGACCGGACCGGGTGTTGAGAAAGGATTATTGGGGTTTATTTTATTAGTTTTTTTTTTTTTTTAATACATGGTGGGGAAAGGGAAACCAACAAATCCTACGTAGAGAGCACACTGCTCTCAAATAATATTAGCACTGAACTATAGCGAGAATGGAGTGGTTAATAATGACTGAAGGTCTGTTTTATACAAGTTCAAGCTTTTGATAGCATAATTATAACAACCTTTTTTTTTAAATGCAAAACTTTACTTGTGATGATGTTTTGTACTATTTACGAAAATTTATTATTTTTATGAGTGG ATGGCATCTTCTTCTCGGGTAGCTTTGGCATCATCAATAGCTCCTCTGCTTCGCAATCGCTCAACAAGATTCCTTCCATGCCGCAATTTCCACCATAAATGGAGCTTCACAATCGCTCATTCTGAATCTTCTCTTCTTCTTCGATCTCCTTTTCGCAATCCTCCGCCATTAATGGCCTCCACAGCTCCAGATCAGCCCGCCCCCGAGGCTCCTCCCTCGAATCCGACGAAAACTGTTAGGGTTGTGATTAAAGGTAGGGTTCAGGGAGTGTTCTATCGCGACTGGACGGTGGAGAATGCTTCTCAGTTAGGGTTGAACGGATGGGTGAGGAATCGGAGAGACGGATCCGTGGAGGCGCTTTTCTCCGGCCGCCCTGACTCCGTGGCGGAGATGGAACAGCGGTGCCGCCGTGGTCCGCCGGCGGCGATGGTTACTGGTTTTCAGGTTTTTCCTTGCTCCGATCTCCCTGGGCCGGGGTTTGAGCGCGTACGGACCGCTTGA MASSSRVALASSIAPLLRNRSTRFLPCRNFHHKWSFTIAHSESSLLLRSPFRNPPPLMASTAPDQPAPEAPPSNPTKTVRVVIKGRVQGVFYRDWTVENASQLGLNGWVRNRRDGSVEALFSGRPDSVAEMEQRCRRGPPAAMVTGFQVFPCSDLPGPGFERVRTA Homology
BLAST of Sed0024166 vs. NCBI nr
Match: XP_038882773.1 (uncharacterized protein LOC120073926 [Benincasa hispida]) HSP 1 Score: 252.3 bits (643), Expect = 2.9e-63 Identity = 134/198 (67.68%), Postives = 142/198 (71.72%), Query Frame = 0
BLAST of Sed0024166 vs. NCBI nr
Match: XP_008462471.1 (PREDICTED: uncharacterized protein LOC103500820 [Cucumis melo]) HSP 1 Score: 246.5 bits (628), Expect = 1.6e-61 Identity = 131/198 (66.16%), Postives = 141/198 (71.21%), Query Frame = 0
BLAST of Sed0024166 vs. NCBI nr
Match: KAA0063813.1 (Acylphosphatase-like protein [Cucumis melo var. makuwa] >TYK07311.1 Acylphosphatase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 244.2 bits (622), Expect = 7.9e-61 Identity = 129/198 (65.15%), Postives = 141/198 (71.21%), Query Frame = 0
BLAST of Sed0024166 vs. NCBI nr
Match: XP_004143272.1 (uncharacterized protein LOC101221855 [Cucumis sativus] >KGN48186.1 hypothetical protein Csa_004387 [Cucumis sativus]) HSP 1 Score: 241.9 bits (616), Expect = 3.9e-60 Identity = 130/198 (65.66%), Postives = 139/198 (70.20%), Query Frame = 0
BLAST of Sed0024166 vs. NCBI nr
Match: KAG6604401.1 (hypothetical protein SDJN03_05010, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034552.1 acyP, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.1 bits (601), Expect = 2.2e-58 Identity = 131/199 (65.83%), Postives = 137/199 (68.84%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy Swiss-Prot
Match: A5VFP2 (Acylphosphatase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) OX=392499 GN=acyP PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18 Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy Swiss-Prot
Match: Q2RQZ4 (Acylphosphatase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=acyP PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.3e-18 Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy Swiss-Prot
Match: Q1QLD8 (Acylphosphatase OS=Nitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14) OX=323097 GN=acyP PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.6e-18 Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy Swiss-Prot
Match: Q89JL8 (Acylphosphatase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=acyP PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-16 Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy Swiss-Prot
Match: Q3SRU5 (Acylphosphatase OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=acyP PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16 Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy TrEMBL
Match: A0A1S3CGZ8 (Acylphosphatase OS=Cucumis melo OX=3656 GN=LOC103500820 PE=3 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 7.7e-62 Identity = 131/198 (66.16%), Postives = 141/198 (71.21%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy TrEMBL
Match: A0A5D3C5Z1 (Acylphosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00250 PE=3 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.8e-61 Identity = 129/198 (65.15%), Postives = 141/198 (71.21%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy TrEMBL
Match: A0A0A0KK97 (Acylphosphatase OS=Cucumis sativus OX=3659 GN=Csa_6G446460 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.9e-60 Identity = 130/198 (65.66%), Postives = 139/198 (70.20%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy TrEMBL
Match: A0A6J1IKV6 (Acylphosphatase OS=Cucurbita maxima OX=3661 GN=LOC111477968 PE=3 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 4.0e-58 Identity = 130/199 (65.33%), Postives = 136/199 (68.34%), Query Frame = 0
BLAST of Sed0024166 vs. ExPASy TrEMBL
Match: A0A6J1EDH3 (Acylphosphatase OS=Cucurbita moschata OX=3662 GN=LOC111433181 PE=3 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 1.2e-57 Identity = 130/199 (65.33%), Postives = 136/199 (68.34%), Query Frame = 0
BLAST of Sed0024166 vs. TAIR 10
Match: AT5G03370.1 (acylphosphatase family ) HSP 1 Score: 144.8 bits (364), Expect = 6.1e-35 Identity = 71/110 (64.55%), Postives = 86/110 (78.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|