Sed0024153 (gene) Chayote v1

Overview


Name	Sed0024153
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Epidermal patterning factor-like protein
Location	LG06: 390604 .. 391967 (+)
RNA-Seq Expression	Sed0024153
Synteny	Sed0024153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGATTTTGGTTTGCTTCCCAACTTTCTGATAAGAAACTGAAATAGATCACTTGTTTGCAAAGCAAAATCTCTCTGTTAGTCCCAAGATGGAGAGAACTTGGAAGAGGATGAAAACAAACAAAACAAAACAAAAACTATGTACACAGAGAGGTTGCTTCTGACCACTGCTTTGGGGAAATGTGAACCTGCTTGATAGGCTTGAATTTTTCTCCCATCTTTTTATACCCAAATCATCTTCCATTTTTTCCATTCATCATCTTTTTCCCATCATTATCATTATCATTTGGCTTTTGAAGAAGACATGAAAGGAAAATACTGTTGTTTTATTTTGACTCTGCAATTTGCTTGTTGGGTTTCTGCTGCAACCAGAACTTTTGCTCCAAATCATCCTCCTCTCCTTCCTCATAAAAAACAAGGTCTGTTTGTTTGTTGTTACCATTATACTGATTCTTTCTCAATTATTACATCTACTTGGTCACAGGTCTTCAATTTCACAACATTTTAACTCAATTTCCTTGTTGCTATGTTGCCAGGTCTTATCTCAGGCTCTTTGGATTCCAAACAGGTCAGCCCCCTCCTATGTGCTCTGTTTGATGCAAGTTTCTAGAAGTGTTGATACAATTTTATGGAAAATGTTGATACTATATATTTCATATGACAAGACAATGTGAATGATTATGAGTTTAATAATTCTCTTATAAATGTTTGGGCCAAGAAATCATTCTTCCATAATCAATGTTCATTCATCTCATAATCATTCATTTTCATTCTCTCATTGCCCTCATAACCATTTTTCATTTCTCCATAACCATTTTTAATTCTTTTTATCTCAAATATAGATAATCTTTCTTCTTCATGTTAATAATTCTTCCACATCATTCTCTTTGTTGCAAACGCCCTTAAATAAGTTTAAATTCCTTTTTGATTGACCTCTTATGTTGCAATTGAATTCATGAACACATGGAAATGTGGATGGAAATATGAACATGTGTTATGAAAATGATTAAGGCTTGTAATAATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTATAAATGAAAATGGAGTAATGTACAGAGGAATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACATCCCTTGATTCTAAACTTGAGAGGAAAGAAAAACTAGTGTTAATTTAGAAAATGATATTGGTTTGTATAAAAATGTTTTTCTTTTCTTGTTAAAAAAATATCGAA

mRNA sequence

GAGAGATTTTGGTTTGCTTCCCAACTTTCTGATAAGAAACTGAAATAGATCACTTGTTTGCAAAGCAAAATCTCTCTGTTAGTCCCAAGATGGAGAGAACTTGGAAGAGGATGAAAACAAACAAAACAAAACAAAAACTATGTACACAGAGAGGTTGCTTCTGACCACTGCTTTGGGGAAATGTGAACCTGCTTGATAGGCTTGAATTTTTCTCCCATCTTTTTATACCCAAATCATCTTCCATTTTTTCCATTCATCATCTTTTTCCCATCATTATCATTATCATTTGGCTTTTGAAGAAGACATGAAAGGAAAATACTGTTGTTTTATTTTGACTCTGCAATTTGCTTGTTGGGTTTCTGCTGCAACCAGAACTTTTGCTCCAAATCATCCTCCTCTCCTTCCTCATAAAAAACAAGGTCTTATCTCAGGCTCTTTGGATTCCAAACAGGTTGTTGAAGGTATAAATGAAAATGGAGTAATGTACAGAGGAATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACATCCCTTGATTCTAAACTTGAGAGGAAAGAAAAACTAGTGTTAATTTAGAAAATGATATTGGTTTGTATAAAAATGTTTTTCTTTTCTTGTTAAAAAAATATCGAA

Coding sequence (CDS)

ATGAAAGGAAAATACTGTTGTTTTATTTTGACTCTGCAATTTGCTTGTTGGGTTTCTGCTGCAACCAGAACTTTTGCTCCAAATCATCCTCCTCTCCTTCCTCATAAAAAACAAGGTCTTATCTCAGGCTCTTTGGATTCCAAACAGGTTGTTGAAGGTATAAATGAAAATGGAGTAATGTACAGAGGAATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTGCTATGGATGCATTCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACATCCCTTGA

Protein sequence

MKGKYCCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDSKQVVEGINENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

Homology

[Close]

BLAST of Sed0024153 vs. NCBI nr
Match: XP_038904354.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 211.1 bits (536), Expect = 5.5e-51
Identity = 97/122 (79.51%), Postives = 102/122 (83.61%), Query Frame = 0


Query: 1   MKGKYCCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDSKQVVEGINENGVM 60
           MK  Y CFIL LQ ACWVSAA RTFAPNH  LLPHK+QGLISGSLDSK+  +G+NE    
Sbjct: 1   MKRTYWCFILILQLACWVSAAARTFAPNH-ALLPHKQQGLISGSLDSKEAGKGVNEE-AF 60

Query: 61  YRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFY 120
           YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTATNRHSHVGVQYTNYEPEGWKCKCGPSFY 120

Query: 121 IP 123
            P
Sbjct: 121 SP 120

[Close]

BLAST of Sed0024153 vs. NCBI nr
Match: XP_004146810.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652342.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >KAE8651286.1 hypothetical protein Csa_001818 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 5.3e-46
Identity = 91/122 (74.59%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 1   MKGKYCCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDSKQVVEGINENGVM 60
           MKG Y CFI  LQ  CWVSAA R FAPN P L PHK+QGLI    DSKQ V+G+ E    
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARNFAPN-PALPPHKQQGLI----DSKQAVKGVKEE-EF 60

Query: 61  YRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFY 120
           YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFY 116

Query: 121 IP 123
            P
Sbjct: 121 SP 116

[Close]

BLAST of Sed0024153 vs. NCBI nr
Match: XP_008447616.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_008447617.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_008447618.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >KAA0036717.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo var. makuwa] >TYK03693.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 92/122 (75.41%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 1   MKGKYCCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDSKQVVEGINENGVM 60
           MKG Y CFI  LQ  CWVSAA RTFAPN P LLPH KQGLI    +SKQ V+GI E    
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPN-PALLPH-KQGLI----ESKQAVKGIKEE-EF 60

Query: 61  YRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFY 120
           YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 115

Query: 121 IP 123
            P
Sbjct: 121 SP 115

[Close]

BLAST of Sed0024153 vs. NCBI nr
Match: XP_022152671.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Momordica charantia] >XP_022152672.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Momordica charantia])

HSP 1 Score: 192.2 bits (487), Expect = 2.6e-45
Identity = 93/125 (74.40%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MKGKYCCFILTLQFA--CWVSAATRTFAPNHP-PLLPHKKQGLISGSLDSKQVVEGINEN 60
           MKG +CCFILTLQ A  CWVSAATR FAPNH  PLLPH KQGLISGS DSK+  E +N  
Sbjct: 1   MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPH-KQGLISGSFDSKEGFEAVN-- 60

Query: 61  GVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP 120
               RGMR+IGSSPP C+HKCYGC PCEAIQVPT + R +H+GVQYTNYEPEGWKCKCGP
Sbjct: 61  ----RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTS-RHSHLGVQYTNYEPEGWKCKCGP 117

Query: 121 SFYIP 123
           SFY P
Sbjct: 121 SFYSP 117

[Close]

BLAST of Sed0024153 vs. NCBI nr
Match: XP_023526549.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44
Identity = 92/126 (73.02%), Postives = 101/126 (80.16%), Query Frame = 0


Query: 1   MKGKY---CCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDS-KQVVEGINE 60
           MKG Y   CCFILTLQ ACWVSAAT TFA     LLPHK+QG    ++DS K V EG+ +
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTFA-----LLPHKQQGF---NVDSVKAVEEGVVK 60

Query: 61  NGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCG 120
            G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCG
Sbjct: 61  EGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRR-SHVGIQYTNYEPEGWKCKCG 117

Query: 121 PSFYIP 123
           PSFY P
Sbjct: 121 PSFYSP 117

[Close]

BLAST of Sed0024153 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-14
Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 46  DSKQVVEGINEN-GVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYT 105
           +S++ +   NEN   + +  R+IGS PP CE KCYGC PCEAIQ PT +    H+   Y 
Sbjct: 35  NSRRRILNPNENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISSI-PHLSPHYA 94

Query: 106 NYEPEGWKCKCGP 118
           NY+PEGW+C C P
Sbjct: 95  NYQPEGWRCHCPP 106

[Close]

BLAST of Sed0024153 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09
Identity = 31/76 (40.79%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 66  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNY 123
           ++GS+PP C ++C  C PC AIQVPT   R                    T V  QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]

BLAST of Sed0024153 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 36  KKQGLISGSLDSKQVVEGINENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKR 95
           K++G  +  +   + +   ++   + R +R +GSSPP C  KC  C PC+ + VP     
Sbjct: 75  KEEGKSTVVIKKTRKIGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPV--PP 134

Query: 96  GTHVGVQYTNYEPEGWKCKCGPSFYIP 123
           GT V  +   Y PE W+CKCG   Y+P
Sbjct: 135 GTPVTAE---YYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Sed0024153 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 23/55 (41.82%), Postives = 29/55 (52.73%), Query Frame = 0


Query: 68  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP 123
           GS PPMC  KC  C PC+A+ VP          +    Y PE W+CKCG   ++P
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVPIQPGL-----IMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of Sed0024153 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 23/55 (41.82%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 68  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP 123
           GSSPP C  KC  C PC+ + VP   + G  + ++   Y PE W+CKCG   ++P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPI--QPGLSMPLE---YYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Sed0024153 vs. ExPASy TrEMBL
Match: A0A1S3BIS6 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.7e-46
Identity = 92/122 (75.41%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 1   MKGKYCCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDSKQVVEGINENGVM 60
           MKG Y CFI  LQ  CWVSAA RTFAPN P LLPH KQGLI    +SKQ V+GI E    
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPN-PALLPH-KQGLI----ESKQAVKGIKEE-EF 60

Query: 61  YRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFY 120
           YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 115

Query: 121 IP 123
            P
Sbjct: 121 SP 115

[Close]

BLAST of Sed0024153 vs. ExPASy TrEMBL
Match: A0A5D3BVF6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00550 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.7e-46
Identity = 92/122 (75.41%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 1   MKGKYCCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDSKQVVEGINENGVM 60
           MKG Y CFI  LQ  CWVSAA RTFAPN P LLPH KQGLI    +SKQ V+GI E    
Sbjct: 1   MKGTYWCFIFILQLVCWVSAAARTFAPN-PALLPH-KQGLI----ESKQAVKGIKEE-EF 60

Query: 61  YRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFY 120
           YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 115

Query: 121 IP 123
            P
Sbjct: 121 SP 115

[Close]

BLAST of Sed0024153 vs. ExPASy TrEMBL
Match: A0A6J1DIF6 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111020335 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45
Identity = 93/125 (74.40%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MKGKYCCFILTLQFA--CWVSAATRTFAPNHP-PLLPHKKQGLISGSLDSKQVVEGINEN 60
           MKG +CCFILTLQ A  CWVSAATR FAPNH  PLLPH KQGLISGS DSK+  E +N  
Sbjct: 1   MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPH-KQGLISGSFDSKEGFEAVN-- 60

Query: 61  GVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP 120
               RGMR+IGSSPP C+HKCYGC PCEAIQVPT + R +H+GVQYTNYEPEGWKCKCGP
Sbjct: 61  ----RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTS-RHSHLGVQYTNYEPEGWKCKCGP 117

Query: 121 SFYIP 123
           SFY P
Sbjct: 121 SFYSP 117

[Close]

BLAST of Sed0024153 vs. ExPASy TrEMBL
Match: A0A6J1GTM4 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457464 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.3e-45
Identity = 91/125 (72.80%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 1   MKGKY---CCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDSKQVVEGINEN 60
           MKG Y   CCFILTLQ ACWVSAAT TFA     LLPHK+QG    S+  K V EG+ + 
Sbjct: 1   MKGTYRCCCCFILTLQLACWVSAATTTFA-----LLPHKQQGFNFDSV--KAVEEGVVKG 60

Query: 61  GVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP 120
           G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGP
Sbjct: 61  GEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRR-SHVGIQYTNYEPEGWKCKCGP 117

Query: 121 SFYIP 123
           SFY P
Sbjct: 121 SFYSP 117

[Close]

BLAST of Sed0024153 vs. ExPASy TrEMBL
Match: A0A6J1IUG9 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480029 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 91/125 (72.80%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 1   MKGKY---CCFILTLQFACWVSAATRTFAPNHPPLLPHKKQGLISGSLDSKQVVEGINEN 60
           MKG Y   CCFILTLQ ACWVSAAT TFA     LLPHK+QG    S+  K V EG+ + 
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTFA-----LLPHKQQGFNFDSV--KAVEEGVVKE 60

Query: 61  GVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP 120
           G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGP
Sbjct: 61  GEVYRGMRKIGSSPPSCEHKCYGCSPCEAIQVPTNNRR-SHVGIQYTNYEPEGWKCKCGP 117

Query: 121 SFYIP 123
           SFY P
Sbjct: 121 SFYSP 117

[Close]

BLAST of Sed0024153 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 46  DSKQVVEGINEN-GVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYT 105
           +S++ +   NEN   + +  R+IGS PP CE KCYGC PCEAIQ PT +    H+   Y 
Sbjct: 35  NSRRRILNPNENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISSI-PHLSPHYA 94

Query: 106 NYEPEGWKCKCGP 118
           NY+PEGW+C C P
Sbjct: 95  NYQPEGWRCHCPP 106

[Close]

BLAST of Sed0024153 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 7.7e-11
Identity = 31/76 (40.79%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 66  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNY 123
           ++GS+PP C ++C  C PC AIQVPT   R                    T V  QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]

BLAST of Sed0024153 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10
Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 36  KKQGLISGSLDSKQVVEGINENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKR 95
           K++G  +  +   + +   ++   + R +R +GSSPP C  KC  C PC+ + VP     
Sbjct: 75  KEEGKSTVVIKKTRKIGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPV--PP 134

Query: 96  GTHVGVQYTNYEPEGWKCKCGPSFYIP 123
           GT V  +   Y PE W+CKCG   Y+P
Sbjct: 135 GTPVTAE---YYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Sed0024153 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10
Identity = 28/61 (45.90%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 62  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYI 121
           R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+CKCG   Y+
Sbjct: 175 RILRGLGSSPPRCSSKCGRCTPCKPVHVPV--PPGTPVTAE---YYPEAWRCKCGNKLYM 230

Query: 122 P 123
           P
Sbjct: 235 P 230

[Close]

BLAST of Sed0024153 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 55.1 bits (131), Expect = 4.7e-08
Identity = 23/55 (41.82%), Postives = 29/55 (52.73%), Query Frame = 0


Query: 68  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP 123
           GS PPMC  KC  C PC+A+ VP          +    Y PE W+CKCG   ++P
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVPIQPGL-----IMPLEYYPEAWRCKCGNKLFMP 107

The following BLAST results are available for this feature:

BLAST of Sed0024153 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904354.1	5.5e-51	79.51	EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida]	[more]
XP_004146810.1	5.3e-46	74.59	EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPI...	[more]
XP_008447616.1	2.0e-45	75.41	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_0084476...	[more]
XP_022152671.1	2.6e-45	74.40	EPIDERMAL PATTERNING FACTOR-like protein 3 [Momordica charantia] >XP_022152672.1...	[more]
XP_023526549.1	1.3e-44	73.02	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0024153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C4B8C4	1.9e-14	49.32	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	1.1e-09	40.79	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	1.4e-09	34.48	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	6.6e-07	41.82	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	1.1e-06	41.82	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Sed0024153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIS6	9.7e-46	75.41	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030...	[more]
A0A5D3BVF6	9.7e-46	75.41	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1DIF6	1.3e-45	74.40	Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1GTM4	8.3e-45	72.80	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IUG9	1.1e-44	72.80	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of Sed0024153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13898.1	1.4e-15	49.32	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT5G10310.1	7.7e-11	40.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30370.2	1.0e-10	34.48	allergen-related	[more]
AT2G30370.1	2.9e-10	45.90	allergen-related	[more]
AT3G22820.1	4.7e-08	41.82	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 66..122 e-value: 2.9E-20 score: 72.0
None	No IPR available	PANTHER	PTHR33109:SF14	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3	coord: 1..122
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024153.1	Sed0024153.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region