Sed0024095 (gene) Chayote v1

Overview


Name	Sed0024095
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DUF4228 domain protein
Location	LG12: 31913351 .. 31914285 (-)
RNA-Seq Expression	Sed0024095
Synteny	Sed0024095

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCTGCAGTTTTGCCAAACACGCTCTCTAAATGGGAAACTCAGCCTCCTGTGCGCCACCAATGGCCGCCGCCAGCGCCGCCGCGAAGGTCGTAACCCTAGACGGAGATTTACAGAGCTACACGAAGCCGGTGAAGGCCGCCGATCTAATGCTCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAAGTCGGCCATCGGATTCGAGGCCTTTTCCCGGACGAAGATCTCGAGCGCCGCCGATTGTACTTTCTTCTTCCGATCGATCTTCTTTACTCTGTATTGACGCTCGAAGAACTGAATTCGCTCACTTACATCGCTTCTAATGCTCTCAAACGTCGAAATTCGAGTGGATTTGGAAGGATCTTGTTCTCAGGTTTAATCGGCGAGCTCTGTGTTTTTCCGTCGGATTTGAATCGGTTGAAATCGACGGACGGCGGCGATCGAGAGAATCGAAGCTCGAAGCCTGTGCAGAGATTGATGTCGAAACATAGACCGTGGAAACCGGCGCTCGAAACCATTGCCGAAAATTCGTGCACGTAAACAGAAATTTACAGAGCTATGTGGAGCCAGTGAAGGCCACCGAACTGATGATCGAGCATATTACTCTGCGATCCCGGCGATCTCAAAGTCGGTAATCGGATTCCGACGATTCTACTTTCTACTTCCGATCGATCTTCTTTACTGTGTTGACGATCGAAAAACTGAATTCCCTCACTTGCATCGCTTCAAAGGCTCTGAAACGTGGAAATTCGAGTGGATTTGGAAGGTTCTTGTTCTTCGGCTTGATCGGCGATCTCTGTAATTTTCCGGCGGATGTGAATCGGAGTCCGATGGCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAACTTGCGCTGAAATTTCGTGCACGTAAACAGAAACTTATTGCAAATGCCAAA

mRNA sequence

CTTTTCTGCAGTTTTGCCAAACACGCTCTCTAAATGGGAAACTCAGCCTCCTGTGCGCCACCAATGGCCGCCGCCAGCGCCGCCGCGAAGGTCGTAACCCTAGACGGAGATTTACAGAGCTACACGAAGCCGGTGAAGGCCGCCGATCTAATGCTCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAAGTCGGCCATCGGATTCGAGGCCTTTTCCCGGACGAAGATCTCGAGCGCCGCCGATTGTACTTTCTTCTTCCGATCGATCTTCTTTACTCTGTATTGACGCTCGAAGAACTGAATTCGCTCACTTACATCGCTTCTAATGCTCTCAAACGTCGAAATTCGAGTGGATTTGGAAGGATCTTGTTCTCAGGTTTAATCGGCGAGCTCTGTGTTTTTCCGTCGGATTTGAATCGGTTGAAATCGACGGACGGCGGCGATCGAGAGAATCGAAGCTCGAAGCCTGTGCAGAGATTGATGTCGAAACATAGACCGTGGAAACCGGCGCTCGAAACCATTGCCGAAAATTCGTGCACGTAAACAGAAATTTACAGAGCTATGTGGAGCCAGTGAAGGCCACCGAACTGATGATCGAGCATATTACTCTGCGATCCCGGCGATCTCAAAGTCGGTAATCGGATTCCGACGATTCTACTTTCTACTTCCGATCGATCTTCTTTACTGTGTTGACGATCGAAAAACTGAATTCCCTCACTTGCATCGCTTCAAAGGCTCTGAAACGTGGAAATTCGAGTGGATTTGGAAGGTTCTTGTTCTTCGGCTTGATCGGCGATCTCTGTAATTTTCCGGCGGATGTGAATCGGAGTCCGATGGCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAACTTGCGCTGAAATTTCGTGCACGTAAACAGAAACTTATTGCAAATGCCAAA

Coding sequence (CDS)

ATGGGAAACTCAGCCTCCTGTGCGCCACCAATGGCCGCCGCCAGCGCCGCCGCGAAGGTCGTAACCCTAGACGGAGATTTACAGAGCTACACGAAGCCGGTGAAGGCCGCCGATCTAATGCTCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAAGTCGGCCATCGGATTCGAGGCCTTTTCCCGGACGAAGATCTCGAGCGCCGCCGATTGTACTTTCTTCTTCCGATCGATCTTCTTTACTCTGTATTGACGCTCGAAGAACTGAATTCGCTCACTTACATCGCTTCTAATGCTCTCAAACGTCGAAATTCGAGTGGATTTGGAAGGATCTTGTTCTCAGGTTTAATCGGCGAGCTCTGTGTTTTTCCGTCGGATTTGAATCGGTTGAAATCGACGGACGGCGGCGATCGAGAGAATCGAAGCTCGAAGCCTGTGCAGAGATTGATGTCGAAACATAGACCGTGGAAACCGGCGCTCGAAACCATTGCCGAAAATTCGTGCACGTAA

Protein sequence

MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRIRGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLIGELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSCT

Homology

[Close]

BLAST of Sed0024095 vs. NCBI nr
Match: XP_022965466.1 (uncharacterized protein LOC111465363 [Cucurbita maxima])

HSP 1 Score: 252.3 bits (643), Expect = 3.0e-63
Identity = 132/172 (76.74%), Postives = 147/172 (85.47%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSA CAP M A + AAKV+TLDG+LQS+TKPVKAA+LM+EHSGKFLCDSGDLKVGHRI
Sbjct: 1   MGNSAFCAPSM-AFNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
            GL  +E LE RRLYFLLP+DLLYSVLT+EE++SLTYIA+ ALKR NSSGFGRI F  LI
Sbjct: 61  PGLLTEEYLECRRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSCT 173
            ELC+FPSD+N LKS DG    N+SSKPVQRLMSK R WKPALETIAE SCT
Sbjct: 121 SELCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Sed0024095 vs. NCBI nr
Match: XP_023531736.1 (uncharacterized protein LOC111793899 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.1 bits (640), Expect = 6.7e-63
Identity = 131/172 (76.16%), Postives = 147/172 (85.47%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSA CAP M A++ AAKV+TLDG+LQS+TKPVKAA+LM+EHSGKFLCDSGDLKVGHRI
Sbjct: 1   MGNSAFCAPSM-ASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
            GL  +E LE  RLYFLLP+DLLYSVLT+EE++SLTYIA+ ALKR NSSGFGRI F  LI
Sbjct: 61  PGLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSCT 173
            ELC+FPSD+N LKS DG    N+SSKPVQRLMSK R WKPALETIAE SCT
Sbjct: 121 SELCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Sed0024095 vs. NCBI nr
Match: KAG7021657.1 (hypothetical protein SDJN02_15383, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.8 bits (634), Expect = 3.3e-62
Identity = 130/172 (75.58%), Postives = 146/172 (84.88%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSA CAP M A++ AAKV+TLDG+LQS+ KPVKAA+LM+EHSGKFLCDSGDLKVGHRI
Sbjct: 1   MGNSAFCAPSM-ASNGAAKVLTLDGNLQSFMKPVKAAELMIEHSGKFLCDSGDLKVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
            GL  +E LE  RLYFLLP+DLLYSVLT+EE++SLTYIA+ ALKR NSSGFGRI F  LI
Sbjct: 61  PGLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSCT 173
            ELC+FPSD+N LKS DG    N+SSKPVQRLMSK R WKPALETIAE SCT
Sbjct: 121 SELCIFPSDVNGLKSVDGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Sed0024095 vs. NCBI nr
Match: XP_022933703.1 (uncharacterized protein LOC111441040 [Cucurbita moschata])

HSP 1 Score: 248.1 bits (632), Expect = 5.7e-62
Identity = 129/172 (75.00%), Postives = 146/172 (84.88%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSA CAP M A++ AAKV+TLDG+LQS+ KPVKAA+LM+EHSGKFLCDSGDLKVGHRI
Sbjct: 1   MGNSAFCAPSM-ASNGAAKVLTLDGNLQSFMKPVKAAELMIEHSGKFLCDSGDLKVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
            GL  +E LE  RLYFLLP+DLLYSVLT+EE++SLTYIA+ A+KR NSSGFGRI F  LI
Sbjct: 61  PGLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKAMKRGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSCT 173
            ELC+FPSD+N LKS DG    N+SSKPVQRLMSK R WKPALETIAE SCT
Sbjct: 121 SELCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Sed0024095 vs. NCBI nr
Match: XP_022921761.1 (uncharacterized protein LOC111429917 [Cucurbita moschata])

HSP 1 Score: 247.7 bits (631), Expect = 7.4e-62
Identity = 131/171 (76.61%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSASCAP M A++ AAKV++LDG LQSY KPV+AA+LM+EHSGKFLCDS DL VGHRI
Sbjct: 1   MGNSASCAPSM-ASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
           +GL PDEDLE RRLYFLLP+DLLYSVLT+EE+ SLTY A+ ALK  NSSGFGRI F  LI
Sbjct: 61  QGLLPDEDLECRRLYFLLPMDLLYSVLTIEEMRSLTYTATKALKHGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSC 172
            +LC+  SD+NRLKS D GDRENRSSKPVQRLMSK R WKPALETIAE SC
Sbjct: 121 TDLCISLSDVNRLKSAD-GDRENRSSKPVQRLMSKQRSWKPALETIAETSC 168

[Close]

BLAST of Sed0024095 vs. ExPASy TrEMBL
Match: A0A6J1HLR9 (uncharacterized protein LOC111465363 OS=Cucurbita maxima OX=3661 GN=LOC111465363 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63
Identity = 132/172 (76.74%), Postives = 147/172 (85.47%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSA CAP M A + AAKV+TLDG+LQS+TKPVKAA+LM+EHSGKFLCDSGDLKVGHRI
Sbjct: 1   MGNSAFCAPSM-AFNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
            GL  +E LE RRLYFLLP+DLLYSVLT+EE++SLTYIA+ ALKR NSSGFGRI F  LI
Sbjct: 61  PGLLTEEYLECRRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSCT 173
            ELC+FPSD+N LKS DG    N+SSKPVQRLMSK R WKPALETIAE SCT
Sbjct: 121 SELCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Sed0024095 vs. ExPASy TrEMBL
Match: A0A6J1F5K3 (uncharacterized protein LOC111441040 OS=Cucurbita moschata OX=3662 GN=LOC111441040 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.8e-62
Identity = 129/172 (75.00%), Postives = 146/172 (84.88%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSA CAP M A++ AAKV+TLDG+LQS+ KPVKAA+LM+EHSGKFLCDSGDLKVGHRI
Sbjct: 1   MGNSAFCAPSM-ASNGAAKVLTLDGNLQSFMKPVKAAELMIEHSGKFLCDSGDLKVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
            GL  +E LE  RLYFLLP+DLLYSVLT+EE++SLTYIA+ A+KR NSSGFGRI F  LI
Sbjct: 61  PGLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKAMKRGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSCT 173
            ELC+FPSD+N LKS DG    N+SSKPVQRLMSK R WKPALETIAE SCT
Sbjct: 121 SELCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Sed0024095 vs. ExPASy TrEMBL
Match: A0A6J1E2A0 (uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC111429917 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 131/171 (76.61%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSASCAP M A++ AAKV++LDG LQSY KPV+AA+LM+EHSGKFLCDS DL VGHRI
Sbjct: 1   MGNSASCAPSM-ASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
           +GL PDEDLE RRLYFLLP+DLLYSVLT+EE+ SLTY A+ ALK  NSSGFGRI F  LI
Sbjct: 61  QGLLPDEDLECRRLYFLLPMDLLYSVLTIEEMRSLTYTATKALKHGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSC 172
            +LC+  SD+NRLKS D GDRENRSSKPVQRLMSK R WKPALETIAE SC
Sbjct: 121 TDLCISLSDVNRLKSAD-GDRENRSSKPVQRLMSKQRSWKPALETIAETSC 168

[Close]

BLAST of Sed0024095 vs. ExPASy TrEMBL
Match: A0A6J1JH13 (uncharacterized protein LOC111485040 OS=Cucurbita maxima OX=3661 GN=LOC111485040 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.7e-62
Identity = 132/171 (77.19%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSASCAP M A++ AAKV++LDG LQSYTK V+AA+LM+EHSGKFLCDS DL VGHRI
Sbjct: 1   MGNSASCAPSM-ASNGAAKVLSLDGKLQSYTKRVQAAELMIEHSGKFLCDSADLSVGHRI 60

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
           +GL PDEDLE RRLYFLLP+DLLYSVLTLEE+ SLTY A+ ALK  NSSGFGRI F  LI
Sbjct: 61  QGLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRI-FPVLI 120

Query: 121 GELCVFPSDLNRLKSTDGGDRENRSSKPVQRLMSKHRPWKPALETIAENSC 172
            +LC+  SD+NRLKS D GDRENRSSKPVQRLMSK R WKPALETIAE SC
Sbjct: 121 TDLCISLSDVNRLKSAD-GDRENRSSKPVQRLMSKQRSWKPALETIAETSC 168

[Close]

BLAST of Sed0024095 vs. ExPASy TrEMBL
Match: A0A6J1C0W6 (uncharacterized protein LOC111007254 OS=Momordica charantia OX=3673 GN=LOC111007254 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.0e-61
Identity = 129/173 (74.57%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRI 60
           MGNSASCAP M  ++ AAKV++LDG L+SYTKPVKAA+LM+E+SGKFLCDSGDLKVGHRI
Sbjct: 24  MGNSASCAPSM-VSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRI 83

Query: 61  RGLFPDEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLI 120
           +GL PDEDLE RRLYFLLP+DLLYSVLTLEE++SLTYIA+ ALK+ NSSGFGRI F  LI
Sbjct: 84  QGLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRI-FPVLI 143

Query: 121 GELCVFPSDLNRLKSTDGG-DRENRSSKPVQRLMSKHRPWKPALETIAENSCT 173
            ELC+ PS++NRLKS     + EN + KPVQRLMSK R WKPALETIAE SCT
Sbjct: 144 SELCILPSEVNRLKSEHSDRETENSTKKPVQRLMSKQRSWKPALETIAETSCT 194

[Close]

BLAST of Sed0024095 vs. TAIR 10
Match: AT1G18290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 68/184 (36.96%), Postives = 106/184 (57.61%), Query Frame = 0


Query: 1   MGNSASCAPPMAAASAAAKVVTL----DGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKV 60
           MGN++SCAP + + ++++ VV +     G L+ ++KP+K +D++  HSG F+ DS  L++
Sbjct: 1   MGNTSSCAPLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTLLQI 60

Query: 61  GHRIRGLFPDEDLE-RRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRIL 120
            HR+  + PDE L  RR LY LLP D+L+SVLT EEL+ ++  A+  L +   +   RI 
Sbjct: 61  SHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELSLISNKAAETLNKSRYNHLKRIF 120

Query: 121 FSGLIGELCVF---------PSDLNRLKSTDGGD-RENRSSKPVQRLMSKHRPWKPALET 170
                  +C+F         PS +N  ++ DG + RE    K +    SKH  W+P LET
Sbjct: 121 ------PVCIFPMTGDRRRNPSSVNEDRAHDGVEIRETLDEKVLYE--SKHGSWRPKLET 176

[Close]

BLAST of Sed0024095 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-10
Identity = 41/136 (30.15%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 7   CAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRIRGLFPD 66
           C+   +   A AK++  DG +  +  PVK   ++L++   F+C+S D+     +  +  D
Sbjct: 4   CSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISAD 63

Query: 67  EDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILFSGLIGELCVF 126
           E+L+  ++YF LP+  L   L  EE+ +L   AS+AL R    G  R          CV 
Sbjct: 64  EELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRR---------KCVE 123

Query: 127 P--SDLNRLKSTDGGD 141
           P  SD  R++   G D
Sbjct: 124 PIVSDKLRMRVGSGDD 130

[Close]

BLAST of Sed0024095 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.2e-10
Identity = 33/106 (31.13%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 6   SCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRIRGLFP 65
           +CA   +  S +AK++ LDG LQ ++ PVK   ++ ++   F+C+S ++     +  +  
Sbjct: 3   ACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAG 62

Query: 66  DEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGF 112
           +E+L   +LYF+LP+  L   L  EE+ +L   AS+AL +    G+
Sbjct: 63  NEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGW 108

[Close]

BLAST of Sed0024095 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 32/105 (30.48%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 6   SCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGHRIRGLFP 65
           +CA   +  +  AK++  DG LQ ++ PVK   ++ ++   F+C+S D+     +  +  
Sbjct: 3   ACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAVPG 62

Query: 66  DEDLERRRLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSG 111
            EDL    LYF+LP+  L   L  +E+ +L   AS+AL +    G
Sbjct: 63  SEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGGG 107

[Close]

BLAST of Sed0024095 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-08
Identity = 52/181 (28.73%), Postives = 82/181 (45.30%), Query Frame = 0


Query: 1   MGN--SASCAPPMAAASAAAKVVTLDGDLQSYTKPVKAADLMLEHSGKFLCDSGDLKVGH 60
           MGN  S++ +   +++S+AAKV+  DG +++   P+KAA+LM+E    FL D+  LK+G 
Sbjct: 1   MGNYVSSALSKTSSSSSSAAKVILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLKIGR 60

Query: 61  RIRGLFPDEDLERR--RLYFLLPIDLLYSVLTLEELNSLTYIASNALKRRNSSGFGRILF 120
           +   L  D+DL+ +   +Y   P+    S     +L  L   A    + R  S       
Sbjct: 61  KFCPLAADDDLQIKGCHVYVAFPMTRATSAANASDLARLFVAAKKQRRHRVGSDHSSAAV 120

Query: 121 SGLIGELCVFP-SDLNRLKSTDGG------DRENRSSKPVQRLMSKHRPWKPALETIAEN 171
                   V P  + + +K    G      D E  S+      +S  +  KP LETI E 
Sbjct: 121 KHCHNNGRVSPDGEGDDVKVISAGSKLNLEDIEEFSAAEFMHRISVSKSKKPKLETIVEE 180

The following BLAST results are available for this feature:

BLAST of Sed0024095 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965466.1	3.0e-63	76.74	uncharacterized protein LOC111465363 [Cucurbita maxima]	[more]
XP_023531736.1	6.7e-63	76.16	uncharacterized protein LOC111793899 [Cucurbita pepo subsp. pepo]	[more]
KAG7021657.1	3.3e-62	75.58	hypothetical protein SDJN02_15383, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022933703.1	5.7e-62	75.00	uncharacterized protein LOC111441040 [Cucurbita moschata]	[more]
XP_022921761.1	7.4e-62	76.61	uncharacterized protein LOC111429917 [Cucurbita moschata]	[more]

BLAST of Sed0024095 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0024095 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLR9	1.5e-63	76.74	uncharacterized protein LOC111465363 OS=Cucurbita maxima OX=3661 GN=LOC111465363...	[more]
A0A6J1F5K3	2.8e-62	75.00	uncharacterized protein LOC111441040 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]
A0A6J1E2A0	3.6e-62	76.61	uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JH13	4.7e-62	77.19	uncharacterized protein LOC111485040 OS=Cucurbita maxima OX=3661 GN=LOC111485040...	[more]
A0A6J1C0W6	1.0e-61	74.57	uncharacterized protein LOC111007254 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Sed0024095 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18290.1	1.9e-23	36.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	5.4e-10	30.15	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	9.2e-10	31.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G50800.1	1.3e-08	30.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G17350.1	3.9e-08	28.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..168 e-value: 2.0E-33 score: 116.3
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..168
None	No IPR available	PANTHER	PTHR33052:SF19	DUF4228 DOMAIN PROTEIN	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024095.1	Sed0024095.1	mRNA