Sed0024035 (gene) Chayote v1

Overview


Name	Sed0024035
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG11: 1029798 .. 1031673 (+)
RNA-Seq Expression	Sed0024035
Synteny	Sed0024035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCGAGGACGAAAAACATGGATGGGGAATACATTTTCCATCGCCATACCCATTTAGTTTGTGAAGAATTTTATGTCCCTACTCGCTCCTTCATTTTCTACCAAAATGGAGATTCATTGCTCCTAACGGGACGGTTCTCACAAGATCCGATACCGTGAGAAAAATTGACATTTCTAATTCAAACTTGTTGCTTGCCAACAAAAGCATGCTGATACATTCAATGAACAATAGATTATGGTCTCATCTCTAGTAATTGTAAAACTTAAAAAAAACAAAAATGCTTATAATTTTATTATCAACTATGCCAACTACTACTAATTAGCTAAATTTATTTTAGCAATTCTTGTCATAGACTACATTTTTTTTCTTTAAAATGGAGCTTCTTATGGATCCAATTATGGCACATTCACCCCTAATTTCTTCACGTTGATATTAGTCCATAAAACAATATCTTAGCTGACACAAATATACTTATAATAAAAAAGAACAATAGTTCCAATTTTGTCATTCTTAAAAATTGATAAACTAAAAAAATATAGACATTAAATTTACATGTGCTAGCCATATTTTATTTCATAAGTTAATACTTGTCTGTCCTGGAGTTATTTTATCCACAGTTTTAAACATGTTTCTAATAGAGGAAGTATCTCTTCTGGTTGGGGCACTAAGCCTGCACTTGCTATCTCTGGGAATAATCTGAATTCTAGGATCCCTAGCATGCCAGATGATTTTTGGAGTACAAGCTCGTGTGATCTCGATGAATCATTTACGCTTCAATATCGACCGGACTCATTTTTCGGCATAACAAACCACTCCTCTAACCATGGAGGTGGATCATTCTGATCCTGACTTTGTAAATCATGGTAAGCTCATACCTTATCATTCGTCGTTTCTTCATATAGCTTTAGTACCTTTTTTTATATCTGTGAGTGTCTGAGCCAATTTCCACACACTTCGACTATTCTCACAGCACAACCACCTAACCCTATAATATTCGGTCGTCAAAAAAACTCATAAAAAATTAAATTTTAGATAAGTGGCCACTATGGATTGAACTCAATACCTCTTAGTTCTCAAAGGCTTATATAACTTTAGTGTCATTACTTCCTGTTCCTCCAGTTTGGTTCTTTGGGCTCAGACCAGGCTTAGATAGGTTGAAGATCGTGCACCTGCTAAACAAACTAAAAACCTCTTCTTTTTTTTACTGACTCGAGAACTTTGAGCTTTGTTACTCTAAATTCAGGATCATCACTGGTCTATCCAGGGCCACTTGGGAAATTAATCCTTGTACCAGTCTTGAACTTGGGACCTTAAGAAGCGCACACCCTCAAGGCCCAAGTGCTCGACCACTGCCCCACCCCTAGCGGATATGTCAACCTGCTTATAATGCAAATGAAATCCCTCTCTTCCCGATATTTCTAGCAATTGATTGAATATTTCCTTACTATATTCTTTTGTTATTCAAAAAAATTGGGTCATCACATTCACAAACCATGTAGAAGTTCTTTTTAGTAGAAGCACACATCCATCTAAGAAAGTCAAGTTTCTTGTTGATTTAGTTGTTACCAAATTTTGATTCTTAATTTTTTTTTTTTGTCCCTACCATATTGCTTGGTTTCTGTTTGCAGTTGGTATATGACTAAAGAACTCGTGCTTGAAAGCAAACGACCTTTTCATCGGCGCATGCCCCGATCCGCAAGTCTTCTCTGTGTCTGTAATCTAGATTATGTAACCATGAGATAATTGACAGGAAATGGTAGACATTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTATCGGGCCAGTCAATTGAAAAAACGATCACCTTGTGCATACACCATGTTTACGACTTTTTCAGAGTTGAATTAA

mRNA sequence

ATGGGGCGAGGACGAAAAACATGGATGGGGAATACATTTTCCATCGCCATACCCATTTATATCTCTTCTGGTTGGGGCACTAAGCCTGCACTTGCTATCTCTGGGAATAATCTGAATTCTAGGATCCCTAGCATGCCAGATGATTTTTGGAGTACAAGCTCGTGTGATCTCGATGAATCATTTACGCTTCAATATCGACCGGACTCATTTTTCGGCATAACAAACCACTCCTCTAACCATGGAGGCTTATATAACTTTAGTGTCATTACTTCCTGTTCCTCCAGTTTGGTTCTTTGGGCTCAGACCAGTTGGTATATGACTAAAGAACTCGTGCTTGAAAGCAAACGACCTTTTCATCGGCGCATGCCCCGATCCGAAATGGTAGACATTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTATCGGGCCAGTCAATTGAAAAAACGATCACCTTGTGCATACACCATGTTTACGACTTTTTCAGAGTTGAATTAA

Coding sequence (CDS)

ATGGGGCGAGGACGAAAAACATGGATGGGGAATACATTTTCCATCGCCATACCCATTTATATCTCTTCTGGTTGGGGCACTAAGCCTGCACTTGCTATCTCTGGGAATAATCTGAATTCTAGGATCCCTAGCATGCCAGATGATTTTTGGAGTACAAGCTCGTGTGATCTCGATGAATCATTTACGCTTCAATATCGACCGGACTCATTTTTCGGCATAACAAACCACTCCTCTAACCATGGAGGCTTATATAACTTTAGTGTCATTACTTCCTGTTCCTCCAGTTTGGTTCTTTGGGCTCAGACCAGTTGGTATATGACTAAAGAACTCGTGCTTGAAAGCAAACGACCTTTTCATCGGCGCATGCCCCGATCCGAAATGGTAGACATTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTATCGGGCCAGTCAATTGAAAAAACGATCACCTTGTGCATACACCATGTTTACGACTTTTTCAGAGTTGAATTAA

Protein sequence

MGRGRKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQTSWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYYRASQLKKRSPCAYTMFTTFSELN

Homology

[Close]

BLAST of Sed0024035 vs. NCBI nr
Match: XP_038889429.1 (uncharacterized protein LOC120079339 isoform X1 [Benincasa hispida])

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-34
Identity = 89/164 (54.27%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 5   RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQ 64
           R++W+    S+ I   +S   G KPA AISGNNLNSR+PSM DDFWSTS+CD DE  TLQ
Sbjct: 4   RESWI----SVWIDRLLSCLGGIKPAPAISGNNLNSRMPSMSDDFWSTSTCDPDEMLTLQ 63

Query: 65  YRPDSFFGITNHSSNHGG----LYNFSVITSCSSSLVLWAQT------------------ 124
            R +SF   TNH+SNHGG    L N S     +   VLW QT                  
Sbjct: 64  SRQNSFISTTNHNSNHGGGTDNLRNHSDFV--NHGFVLWTQTRLRWVGNCVPAKRTKKNH 123

Query: 125 ----SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
               SWYMTKEL+LESK+P+HRR+P SEMVD LVEEWEEEGLYY
Sbjct: 124 LTGLSWYMTKELLLESKKPYHRRIPLSEMVDFLVEEWEEEGLYY 161

[Close]

BLAST of Sed0024035 vs. NCBI nr
Match: XP_008465549.1 (PREDICTED: uncharacterized protein LOC103503177 isoform X2 [Cucumis melo])

HSP 1 Score: 154.8 bits (390), Expect = 6.3e-34
Identity = 86/162 (53.09%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 5   RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQ 64
           R++W    FS+ I   +S     KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ
Sbjct: 4   RESW----FSVWIDRLLSCLGSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQ 63

Query: 65  YRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT-------------------- 124
            R +SF   TNH+SNHGG+  N S  +   +   VLW QT                    
Sbjct: 64  SRQNSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKSHIT 123

Query: 125 --SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
             SWYMTKEL+LE+++P+HRR+P SEMVD LVEEWEEEGLYY
Sbjct: 124 GLSWYMTKELLLETRKPYHRRIPLSEMVDFLVEEWEEEGLYY 161

[Close]

BLAST of Sed0024035 vs. NCBI nr
Match: XP_022999179.1 (uncharacterized protein LOC111493640 [Cucurbita maxima])

HSP 1 Score: 154.5 bits (389), Expect = 8.2e-34
Identity = 85/162 (52.47%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 5   RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQ 64
           R++W    FS+ I  ++S   GTKPA  ISGNNLNSR+ SM DDFWSTS+CDLD+  TLQ
Sbjct: 4   RESW----FSVWIDRFLSCLRGTKPAPTISGNNLNSRMLSMSDDFWSTSTCDLDDMLTLQ 63

Query: 65  YRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT-------------------- 124
            R +SF   T+++SNHGG  ++    S   +  L+LW QT                    
Sbjct: 64  SRQNSFISTTSYNSNHGGATDYLSNHSDFVNHGLILWTQTRLRWVGNHESAKRTKRKHLT 123

Query: 125 --SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
             SWYMTKEL+LESKRP+HR +P SEMVD LVEEWEEEGLYY
Sbjct: 124 GLSWYMTKELMLESKRPYHRLIPLSEMVDFLVEEWEEEGLYY 161

[Close]

BLAST of Sed0024035 vs. NCBI nr
Match: XP_004139307.1 (uncharacterized protein LOC101220352 [Cucumis sativus] >KGN60683.1 hypothetical protein Csa_019419 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-33
Identity = 85/162 (52.47%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 5   RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQ 64
           R++W    FS+ I   +S     KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ
Sbjct: 4   RESW----FSVWIDRLLSCLGSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQ 63

Query: 65  YRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT-------------------- 124
            R +SF   TNH+SNHGG+  N S  +   +   VLW QT                    
Sbjct: 64  SRQNSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKNHIT 123

Query: 125 --SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
             SWYMTKEL+LE+++P+HRR+P S+MVD LVEEWEEEGLYY
Sbjct: 124 GLSWYMTKELLLETRKPYHRRIPLSDMVDFLVEEWEEEGLYY 161

[Close]

BLAST of Sed0024035 vs. NCBI nr
Match: XP_016903413.1 (PREDICTED: uncharacterized protein LOC103503177 isoform X1 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 3.1e-33
Identity = 83/159 (52.20%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 8   WMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRP 67
           W+    S  + + +  G   KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ R 
Sbjct: 11  WIDRLLS-CLGVNVCFGRSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQSRQ 70

Query: 68  DSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT----------------------S 127
           +SF   TNH+SNHGG+  N S  +   +   VLW QT                      S
Sbjct: 71  NSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKSHITGLS 130

Query: 128 WYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
           WYMTKEL+LE+++P+HRR+P SEMVD LVEEWEEEGLYY
Sbjct: 131 WYMTKELLLETRKPYHRRIPLSEMVDFLVEEWEEEGLYY 168

[Close]

BLAST of Sed0024035 vs. ExPASy TrEMBL
Match: A0A1S3CQL1 (uncharacterized protein LOC103503177 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503177 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.0e-34
Identity = 86/162 (53.09%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 5   RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQ 64
           R++W    FS+ I   +S     KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ
Sbjct: 4   RESW----FSVWIDRLLSCLGSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQ 63

Query: 65  YRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT-------------------- 124
            R +SF   TNH+SNHGG+  N S  +   +   VLW QT                    
Sbjct: 64  SRQNSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKSHIT 123

Query: 125 --SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
             SWYMTKEL+LE+++P+HRR+P SEMVD LVEEWEEEGLYY
Sbjct: 124 GLSWYMTKELLLETRKPYHRRIPLSEMVDFLVEEWEEEGLYY 161

[Close]

BLAST of Sed0024035 vs. ExPASy TrEMBL
Match: A0A6J1KGB3 (uncharacterized protein LOC111493640 OS=Cucurbita maxima OX=3661 GN=LOC111493640 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.0e-34
Identity = 85/162 (52.47%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 5   RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQ 64
           R++W    FS+ I  ++S   GTKPA  ISGNNLNSR+ SM DDFWSTS+CDLD+  TLQ
Sbjct: 4   RESW----FSVWIDRFLSCLRGTKPAPTISGNNLNSRMLSMSDDFWSTSTCDLDDMLTLQ 63

Query: 65  YRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT-------------------- 124
            R +SF   T+++SNHGG  ++    S   +  L+LW QT                    
Sbjct: 64  SRQNSFISTTSYNSNHGGATDYLSNHSDFVNHGLILWTQTRLRWVGNHESAKRTKRKHLT 123

Query: 125 --SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
             SWYMTKEL+LESKRP+HR +P SEMVD LVEEWEEEGLYY
Sbjct: 124 GLSWYMTKELMLESKRPYHRLIPLSEMVDFLVEEWEEEGLYY 161

[Close]

BLAST of Sed0024035 vs. ExPASy TrEMBL
Match: A0A0A0LFZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006290 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.8e-34
Identity = 85/162 (52.47%), Postives = 104/162 (64.20%), Query Frame = 0


Query: 5   RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQ 64
           R++W    FS+ I   +S     KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ
Sbjct: 4   RESW----FSVWIDRLLSCLGSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQ 63

Query: 65  YRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT-------------------- 124
            R +SF   TNH+SNHGG+  N S  +   +   VLW QT                    
Sbjct: 64  SRQNSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKNHIT 123

Query: 125 --SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
             SWYMTKEL+LE+++P+HRR+P S+MVD LVEEWEEEGLYY
Sbjct: 124 GLSWYMTKELLLETRKPYHRRIPLSDMVDFLVEEWEEEGLYY 161

[Close]

BLAST of Sed0024035 vs. ExPASy TrEMBL
Match: A0A1S4E5A2 (uncharacterized protein LOC103503177 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503177 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33
Identity = 83/159 (52.20%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 8   WMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRP 67
           W+    S  + + +  G   KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ R 
Sbjct: 11  WIDRLLS-CLGVNVCFGRSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQSRQ 70

Query: 68  DSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT----------------------S 127
           +SF   TNH+SNHGG+  N S  +   +   VLW QT                      S
Sbjct: 71  NSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKSHITGLS 130

Query: 128 WYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
           WYMTKEL+LE+++P+HRR+P SEMVD LVEEWEEEGLYY
Sbjct: 131 WYMTKELLLETRKPYHRRIPLSEMVDFLVEEWEEEGLYY 168

[Close]

BLAST of Sed0024035 vs. ExPASy TrEMBL
Match: A0A6J1G589 (uncharacterized protein LOC111450850 OS=Cucurbita moschata OX=3662 GN=LOC111450850 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 9.8e-33
Identity = 84/162 (51.85%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 5   RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQ 64
           R++W    FS+ I  ++S   GTK A  ISGNNLNSR+ SM DDFWSTS+CDLDE  TLQ
Sbjct: 4   RESW----FSVWIDRFLSCLRGTKLAPTISGNNLNSRMLSMSDDFWSTSTCDLDEMLTLQ 63

Query: 65  YRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT-------------------- 124
            R +SF   T+++ NHGG  ++    S   +  L+LW QT                    
Sbjct: 64  SRQNSFISTTSYNPNHGGATDYLSNHSDFVNHGLILWTQTRLRWVGNHESAKRTKRKHLT 123

Query: 125 --SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY 143
             SWYMTKEL+LESKRP+HR +P SEMVD LVEEWEEEGLYY
Sbjct: 124 GLSWYMTKELMLESKRPYHRLIPLSEMVDFLVEEWEEEGLYY 161

[Close]

BLAST of Sed0024035 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11
Identity = 42/120 (35.00%), Postives = 56/120 (46.67%), Query Frame = 0


Query: 43  PSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT 102
           PS+ +DFWSTS+C++D S     R  S    TN++S      N +     +  L LW QT
Sbjct: 51  PSVSEDFWSTSTCEMDNSTLQSQRSMSSISFTNNTSTSASTSNPTEFV--NHGLNLWNQT 110

Query: 103 ---------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLY 142
                                SW  T E +L   + F R +P  EMVD LV+ WE+EGLY
Sbjct: 111 RQQWLANGTSQKKAKVREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLY 168

[Close]

BLAST of Sed0024035 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11
Identity = 42/120 (35.00%), Postives = 56/120 (46.67%), Query Frame = 0


Query: 43  PSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT 102
           PS+ +DFWSTS+C++D S     R  S    TN++S      N +     +  L LW QT
Sbjct: 51  PSVSEDFWSTSTCEMDNSTLQSQRSMSSISFTNNTSTSASTSNPTEFV--NHGLNLWNQT 110

Query: 103 ---------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLY 142
                                SW  T E +L   + F R +P  EMVD LV+ WE+EGLY
Sbjct: 111 RQQWLANGTSQKKAKVREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLY 168

[Close]

BLAST of Sed0024035 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 36/108 (33.33%), Postives = 52/108 (48.15%), Query Frame = 0


Query: 47  DDFWSTSSCDLDESFTLQ-------YRPDSFFGITNHSSNHGGL------YNFSVITSCS 106
           DDFWSTS+CD+D + T+Q       + P      +    NHG +        +    +  
Sbjct: 53  DDFWSTSTCDMDHNITIQSQSSNPPFDPQCSTSNSTEFVNHGLILWNHTRQQWRECLTRQ 112

Query: 107 SSLVLWAQTSWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLY 142
             LV     SW  T + +L + + F + +P  EMV  LV+ WEEEGLY
Sbjct: 113 QCLVPEPAISWNSTYDSLLSTNKLFPQPIPLKEMVHFLVDVWEEEGLY 160

[Close]

BLAST of Sed0024035 vs. TAIR 10
Match: AT3G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 6.5e-05
Identity = 43/140 (30.71%), Postives = 59/140 (42.14%), Query Frame = 0


Query: 26  GTKPALAISGNNLNSRIPSM--PDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGL 85
           GTK  L +  +    R PS+   +DFW+ ++ D++ +        S   +T  S   G  
Sbjct: 24  GTKDVL-VEEDWSELRKPSVVASEDFWTNTTLDMESNAHGSVSSISTTNLTIDSQGCGSS 83

Query: 86  YNFSVITSCSSSLVLWAQT--SWY--------------------MTKELVLESKRPFHRR 142
            N       +  LVLW QT   W                     +T E +L S + F R 
Sbjct: 84  SN-EPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVGREPILNENVTYESLLGSNKRFPRP 143

[Close]

BLAST of Sed0024035 vs. TAIR 10
Match: AT3G15770.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 6.5e-05
Identity = 43/140 (30.71%), Postives = 59/140 (42.14%), Query Frame = 0


Query: 26  GTKPALAISGNNLNSRIPSM--PDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGL 85
           GTK  L +  +    R PS+   +DFW+ ++ D++ +        S   +T  S   G  
Sbjct: 23  GTKDVL-VEEDWSELRKPSVVASEDFWTNTTLDMESNAHGSVSSISTTNLTIDSQGCGSS 82

Query: 86  YNFSVITSCSSSLVLWAQT--SWY--------------------MTKELVLESKRPFHRR 142
            N       +  LVLW QT   W                     +T E +L S + F R 
Sbjct: 83  SN-EPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVGREPILNENVTYESLLGSNKRFPRP 142

The following BLAST results are available for this feature:

BLAST of Sed0024035 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889429.1	1.3e-34	54.27	uncharacterized protein LOC120079339 isoform X1 [Benincasa hispida]	[more]
XP_008465549.1	6.3e-34	53.09	PREDICTED: uncharacterized protein LOC103503177 isoform X2 [Cucumis melo]	[more]
XP_022999179.1	8.2e-34	52.47	uncharacterized protein LOC111493640 [Cucurbita maxima]	[more]
XP_004139307.1	1.4e-33	52.47	uncharacterized protein LOC101220352 [Cucumis sativus] >KGN60683.1 hypothetical ...	[more]
XP_016903413.1	3.1e-33	52.20	PREDICTED: uncharacterized protein LOC103503177 isoform X1 [Cucumis melo]	[more]

BLAST of Sed0024035 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0024035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQL1	3.0e-34	53.09	uncharacterized protein LOC103503177 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1KGB3	4.0e-34	52.47	uncharacterized protein LOC111493640 OS=Cucurbita maxima OX=3661 GN=LOC111493640...	[more]
A0A0A0LFZ6	6.8e-34	52.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006290 PE=4 SV=1	[more]
A0A1S4E5A2	1.5e-33	52.20	uncharacterized protein LOC103503177 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1G589	9.8e-33	51.85	uncharacterized protein LOC111450850 OS=Cucurbita moschata OX=3662 GN=LOC1114508...	[more]

BLAST of Sed0024035 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	4.7e-11	35.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	4.7e-11	35.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G32342.1	1.3e-08	33.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G15770.1	6.5e-05	30.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G15770.2	6.5e-05	30.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33373:SF13	DUF4050 FAMILY PROTEIN	coord: 30..94
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 30..94
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 101..141
None	No IPR available	PANTHER	PTHR33373:SF13	DUF4050 FAMILY PROTEIN	coord: 101..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024035.1	Sed0024035.1	mRNA