Sed0024026 (gene) Chayote v1

Overview


Name	Sed0024026
Type	gene
Organism	Sechium edule (Chayote v1)
Description	HR-like lesion-inducing protein-related
Location	LG02: 50156926 .. 50160757 (-)
RNA-Seq Expression	Sed0024026
Synteny	Sed0024026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTACATATGGAGAGAGATGTAAATTGATTTGATTGGGGAAGAGTACACACATAATTTACACAATTTATAAGAGACGGCGAGCACAAATTTGATCGTCCAGTCGGAGACGAAGAAGTTGCCGATCCACAGCCACAGCCACAACCGGAAATGGGGTTCTTCTCCTTCCTCGGACGCCTCCTCTTTGCCTCCATTTTCATCCTCTCCGCCTCCCAAATGTACGTTTCATTTCCACTTTCATTCTTCTGATTTGTAGGATATTCAATCATCCATCCCATCCCATTTCATATCTATATCTTTGTTTCGTCCATTCCGAATCTTCTATTGTTATTGCTGTTTTTTGCTTTTCTCTTTAATTGTTTGTGCATCTGTATGCTTATTGATTGCGTTGCTGTGTTGTGTTCTGTTGTGGGATTCTCGTTCTATGCCTGACTTAAATTATAAGGAGTTTGGAAAATGGGGTGGCACTGTGGTCGAAGGTGGAGGCACCGACTCGATCCACATGTGACATTAATTTGTAGGCTAAGAAGTACGGACACGAGATACCGACACGCATGGATACGTACATAGCCATTATTTAAAAATGCACGAGGACAGGTGATTTATCATTATTTTTTTATAATATACTTTAAAAATGAAATCCAAAATATTTTAGTCAGTTATAAGCCTACTCATGACAATCTCTAAATATTTTAGTTTTTGTCTCATTTTCTTTCTCTCCATTTGATTTTATTTCTTTCTTTCCTTTTCCATTTGTCTATCTATCTTCGATAGACATTGTCGTCAACGGCCTCCACCAACACTTCTTGTTGTCATGTCAACGTCATTGGAAACAAATAAGTCTTAATTGAGGTGTCTATGATGTGTCCAAAATTCTTAATAATAATAATAATAAAAGAGGACACGAAATTTTGAGTGTCGGACATGTGTCTGACGAGTGTCCGGAAGTATCGGTGTCGGACACGAGTACGACACGGATACTTTGTCAAAATAGAAGTGTCTGTGCTTCCTAGTTTGCAGGCACCCCCTATGTCTCCATTCTTTCAATGTCTTCAGGTACCCTGTCTAGCAATGGCCATAATTACTTTGATCATAATGGAGCAAAGCTTTGATTTCCTTGTTTCAAAAAAAAAAAAAAAAAAATTGATTTCTGTCATTTAATATATGAAAATTTCATTTTGACTTTGTTTGAGGTGGAGCCTGGAATCTTTTCATGAAAAGCAATGGTTGTTGGTTGTTATTAGTGAGATTTTACTTGATTCCAGGTGGTTTAGGGGATAAAGTGTTGGTTTTATCCTTGAACGAACTATGTTAAATGAGGGATAGAGGACAAATTCCACCGAAGATTTCCTGTTTTACCATTTGATGTTTGAAGTATGCCTTGTTTTGTCTTCTTCCACTTGTTAGGTTTTAGTTTTTAATTTTAGGATCAATCTTTAGGTTAGCTAATTGTGCAAATATTTATTTCAATTTTATTGTGATAAATTGGATATTTGATATTGAGCAGAAGGGTGAAAGAAATGAACTGTCATTATCAATGGGAGAAGTTCAACCACCATGGATTGACTTAGTTTTCAATAAGAGCCAATGTAAATATTGGGTGCAAGCCATGGTCTCACCTACTTAAAATTGATTCTATAAATATTTTCTATGCCAAATGTTGTAGGGTCAAGATAATTGTTCGGTAAGAATATTGGTTAGCCAAACACAACATTGTGAGGCTCATTACTTCAACTAGTCCCCGTGTTCCTTGATTGGATCTCTTAGTTTTTGAGAGGGTTGCCCAAAAACAGTATATAAGGCATACCCAAGTAAAAAACTTACAAGTAAACCAGATATAGAGATTCAGATGGCAACTAGGGTTGCTGCTCCAATTGTTATATAATTTCAAGACTCAAGTTAGGAACTTTTCCTATTTTCTTTTTGATACCCATATTCCATTGAAGATTTCATGGCTCATTACTTCAATTGAGATAATCAGAAAACCGTTTTAGTTGGAACTTTAGGTGGTTCGCGAAAAAAGATAGAATTTTTTTTTCTGTGCACATTAGGATGTTTTTCCTTGAATCTTTAACCTTTACCTCCTCCTCCTTATCATTTTATTTGCACTTTCAACAACGTGGGTTTCTCATATAATTGTCAAGGAAACAGTTTAATAATCACTTAGGAACAACTCTATTCTCTAAGTTTGTTAAATACATGCACAAGTATCTCGAGCAAAATGCTTTGTTTACCGAGAATTATCTTATTCTGTGCTTGACTTGACTTTACATGCATCTTTTGGGTTAGGTTTAATGAGTTCGGCAATAATGGTGGGCCAGCAGCTGCGGAATTGTCTCTAAAGGTAGCTGTTTTGAGTAGAAATTTGTCGTCCAAACTGGGAGTAGCGATACCTGATATTGAGGTAAGTAATATTATCAACCATCTGTTTGATACCTAATATTGGTGTAAGAAGGCCATGTATTTTTAAACATCTGTTTCATGCTTGGATATTGATTTAAGACCACAAAGACCACATATTCTTAACCGTCTGTTTGCCTACAACTTTGGCCATTCTCTTCTAATTCACCACTTATAGTTTTATGAAAACGGCAACAACAATCAATCGAAAACAGTGAAAAACATAAAAGAAAACACACATAATTTACGGGTTCACTAACGGTGTGCTAGCTACATCTACGGACAAAGGAAAGAGTGATTTTATTAAGGAGATAACAAATACAAAATGTCGATCAATTGGGACTAGTGAAACATGAAACAGTTCAAGACACATCTCAACAATGTGTATATGGTGTAACTTTCCCTTTGCAAACTTTGAAAATTTTCTGCAGGCCAGACACTTGGTTACCATTTCTTCTTCTCTTAAAGGACTTGGAGGCCTTCTGTTTGTATTTGGCAGTAGCATTGGAGCTCATCTTCTGGTAAGGATTCACCATGTACTTAAATTTAGCCTCAAGTATAAATTTGTTTTCGACATTTTTATATCGGGTCGGTATTACTTTTTATGCACGTATTGAAAACATCTTCTCTTTCAGCTTCTGCAATTGGCTATTTTCACTCCTGTTCTTTATGACTTCTTCAACTATAGCCCCCATAATCCCACTTTCAGTATCCTGCTTGGTGATTTCTTGCAGGTTTGGGTTTTTGGACTTTTGTTTCCCATAGTTTCACTTTAATCATCTCAATTTACATGTGATAAAGACTTGAGGAATCCTGTTTTTGTTGCCAGCACATTGCACTTTTTGGTGCTCTGCTTTTTTTCTTAGGGATGAAGAACACAGTTCCAAAGAGGCAACCAAAAAAGAAGACGCCTAAAACAAAAACATTTTAGATTTGTCAAAGAAGCAACAGTTGGCGACCACATTTCTTTGCTCTGGCATTCAGTTCTTAGATTTACACATAATTTCCACCATTGATACAAACAAGTTATTTACTTCTCATTTAGTTGACTGTTTTCTTTTTTCTCGGATTTGCTTCCCTTCATTGTTGTCTTCTGATGAGTTATTATTTATTCAATTGGAGCTGCGGCATGTAGGTCTTTGTACTTGTGCTCTGTAGAAGAGAATCAAACTTGAATTTTTTGAATTTTGTTGGGAGCATCTTTCTGGATTCCTCTTTTCTTGTGCTTTTTAGTAAGCAATCCAACCATCATCATCATCATCATCATCTGCTTGATGTGCTTAAAGCTCTGAGTTCATAGCATTTGAACCAACCTGCAGGTCCTCAAGTCAAGTTTTCTCCGGAGGTCAATTTTTAGCTGTCTCAACCAGTTTGTGTGTACTTCCACTTTTGTGATAGAATATACCACCTGATCCTATGACATTTGAATATA

mRNA sequence

ATTTTACATATGGAGAGAGATGTAAATTGATTTGATTGGGGAAGAGTACACACATAATTTACACAATTTATAAGAGACGGCGAGCACAAATTTGATCGTCCAGTCGGAGACGAAGAAGTTGCCGATCCACAGCCACAGCCACAACCGGAAATGGGGTTCTTCTCCTTCCTCGGACGCCTCCTCTTTGCCTCCATTTTCATCCTCTCCGCCTCCCAAATGTTTAATGAGTTCGGCAATAATGGTGGGCCAGCAGCTGCGGAATTGTCTCTAAAGGTAGCTGTTTTGAGTAGAAATTTGTCGTCCAAACTGGGAGTAGCGATACCTGATATTGAGGCCAGACACTTGGTTACCATTTCTTCTTCTCTTAAAGGACTTGGAGGCCTTCTGTTTGTATTTGGCAGTAGCATTGGAGCTCATCTTCTGCTTCTGCAATTGGCTATTTTCACTCCTGTTCTTTATGACTTCTTCAACTATAGCCCCCATAATCCCACTTTCAGTATCCTGCTTGGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGCTTTTTTTCTTAGGGATGAAGAACACAGTTCCAAAGAGGCAACCAAAAAAGAAGACGCCTAAAACAAAAACATTTTAGATTTGTCAAAGAAGCAACAGTTGGCGACCACATTTCTTTGCTCTGGCATTCAGTTCTTAGATTTACACATAATTTCCACCATTGATACAAACAAGTTATTTACTTCTCATTTAGTTGACTGTTTTCTTTTTTCTCGGATTTGCTTCCCTTCATTGTTGTCTTCTGATGAGTTATTATTTATTCAATTGGAGCTGCGGCATGTAGGTCTTTGTACTTGTGCTCTGTAGAAGAGAATCAAACTTGAATTTTTTGAATTTTGTTGGGAGCATCTTTCTGGATTCCTCTTTTCTTGTGCTTTTTAGTAAGCAATCCAACCATCATCATCATCATCATCATCTGCTTGATGTGCTTAAAGCTCTGAGTTCATAGCATTTGAACCAACCTGCAGGTCCTCAAGTCAAGTTTTCTCCGGAGGTCAATTTTTAGCTGTCTCAACCAGTTTGTGTGTACTTCCACTTTTGTGATAGAATATACCACCTGATCCTATGACATTTGAATATA

Coding sequence (CDS)

ATGGGGTTCTTCTCCTTCCTCGGACGCCTCCTCTTTGCCTCCATTTTCATCCTCTCCGCCTCCCAAATGTTTAATGAGTTCGGCAATAATGGTGGGCCAGCAGCTGCGGAATTGTCTCTAAAGGTAGCTGTTTTGAGTAGAAATTTGTCGTCCAAACTGGGAGTAGCGATACCTGATATTGAGGCCAGACACTTGGTTACCATTTCTTCTTCTCTTAAAGGACTTGGAGGCCTTCTGTTTGTATTTGGCAGTAGCATTGGAGCTCATCTTCTGCTTCTGCAATTGGCTATTTTCACTCCTGTTCTTTATGACTTCTTCAACTATAGCCCCCATAATCCCACTTTCAGTATCCTGCTTGGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGCTTTTTTTCTTAGGGATGAAGAACACAGTTCCAAAGAGGCAACCAAAAAAGAAGACGCCTAAAACAAAAACATTTTAG

Protein sequence

MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDIEARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLGDFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF

Homology

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BLAST of Sed0024026 vs. NCBI nr
Match: KAG6597378.1 (hypothetical protein SDJN03_10558, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 135/157 (85.99%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSFLGR+LFASIFILSA QMFNEF NNGG AAAELS KVAVL RNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           +  HLV IS SLKG+GGLLFVFGSS+GA+LLLLQLAI TPVLYDFFN+SP NP F ILL 
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
           DFLQHIALFGALLFFLGMKNTVPKRQPKKK PKTKT+
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

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BLAST of Sed0024026 vs. NCBI nr
Match: XP_023538935.1 (uncharacterized protein LOC111799718 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.1 bits (653), Expect = 1.9e-64
Identity = 135/157 (85.99%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSFLGR+LFASIFILSA QMFNEF NNGG AAAELS KVAVL RNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           +  HLV IS SLKG+GGLLFVFGSS+GA+LLLLQLAI TPVLYDFFN SP  P F ILLG
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNISPQKPFFGILLG 120

Query: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
           DFLQHIALFGALLFFLGMKNTVPKRQPKKK PKTKT+
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

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BLAST of Sed0024026 vs. NCBI nr
Match: XP_022942464.1 (uncharacterized protein LOC111447492 [Cucurbita moschata])

HSP 1 Score: 254.6 bits (649), Expect = 5.6e-64
Identity = 134/157 (85.35%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSFLGR+LFASIFILSA QMFNEF NNGG AAAELS KVAVL RNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           +  HLV IS SLKG+GGLLFVFGSS+GA+LLLLQLAI TPVLYDFFN+SP NP F ILL 
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
           DFLQHIALFGALLFFL MKNTVPKRQPKKK PKTKT+
Sbjct: 121 DFLQHIALFGALLFFLEMKNTVPKRQPKKKAPKTKTY 157

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BLAST of Sed0024026 vs. NCBI nr
Match: XP_022975056.1 (uncharacterized protein LOC111474025 [Cucurbita maxima])

HSP 1 Score: 251.1 bits (640), Expect = 6.1e-63
Identity = 133/157 (84.71%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSFLGR+LFASIFILSA QMFNEF NNGG AAA LS KVAVL RNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           +  HLV IS SLKG+GGLLFVFGSS+GA+LLLLQLAI TPVLYDFFN+S   P F ILLG
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILLG 120

Query: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
           DFLQHIALFGALLFFLGMKNTVPKRQPKKK PKTKT+
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

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BLAST of Sed0024026 vs. NCBI nr
Match: XP_022924237.1 (uncharacterized protein LOC111431764 [Cucurbita moschata])

HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 128/158 (81.01%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           M FFSFLGR+LFASIFILSA QMFNEFG+NGGPAAAELSLKVAVL RNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILL- 120
           + RHLV IS SLKG+GGLLFVFGS +GA+LLLLQLAI TPVLYDFFNYSP  P F ILL 
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 GDFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
            DFLQHIALFGAL+FFLGMK T P++  KKKT KTKT+
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

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BLAST of Sed0024026 vs. ExPASy TrEMBL
Match: A0A6J1FRE6 (uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC111447492 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 134/157 (85.35%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSFLGR+LFASIFILSA QMFNEF NNGG AAAELS KVAVL RNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           +  HLV IS SLKG+GGLLFVFGSS+GA+LLLLQLAI TPVLYDFFN+SP NP F ILL 
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
           DFLQHIALFGALLFFL MKNTVPKRQPKKK PKTKT+
Sbjct: 121 DFLQHIALFGALLFFLEMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Sed0024026 vs. ExPASy TrEMBL
Match: A0A6J1ID53 (uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 133/157 (84.71%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSFLGR+LFASIFILSA QMFNEF NNGG AAA LS KVAVL RNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           +  HLV IS SLKG+GGLLFVFGSS+GA+LLLLQLAI TPVLYDFFN+S   P F ILLG
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILLG 120

Query: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
           DFLQHIALFGALLFFLGMKNTVPKRQPKKK PKTKT+
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Sed0024026 vs. ExPASy TrEMBL
Match: A0A6J1E8C2 (uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC111431764 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 5.2e-60
Identity = 128/158 (81.01%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           M FFSFLGR+LFASIFILSA QMFNEFG+NGGPAAAELSLKVAVL RNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILL- 120
           + RHLV IS SLKG+GGLLFVFGS +GA+LLLLQLAI TPVLYDFFNYSP  P F ILL 
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 GDFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
            DFLQHIALFGAL+FFLGMK T P++  KKKT KTKT+
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Sed0024026 vs. ExPASy TrEMBL
Match: A0A6J1ISL2 (uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.9e-60
Identity = 127/158 (80.38%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           M FFSFLGR+LFASIFILSA QMFNEFG+NGGPA+AEL+LKVAVL RNLSSKLGVAIPDI
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPASAELALKVAVLRRNLSSKLGVAIPDI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILL- 120
           + RHLV IS SLKG+GGLLFVFGS +GA+LLLLQLAI TPVLYDFFNYSP  P F ILL 
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 GDFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTKTF 158
            DFLQHIALFGAL+FFLGMK T P++  KKKT KTKT+
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Sed0024026 vs. ExPASy TrEMBL
Match: A0A1S3AXB3 (uncharacterized protein LOC103483616 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483616 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 122/156 (78.21%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSF GRLLFAS FILSA QMFNEFGNNGGPAAAELS KVAVL RNLSSKL VAIPDI
Sbjct: 1   MGFFSFFGRLLFASFFILSAWQMFNEFGNNGGPAAAELSSKVAVLRRNLSSKLAVAIPDI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           + RHLV +S SLKG+GGLLFVFGS +GA+LLLL LAI TPVL+DFFN+S   P F I L 
Sbjct: 61  DVRHLVALSLSLKGIGGLLFVFGSRVGAYLLLLHLAIITPVLFDFFNFSLQKPNFGIPLS 120

Query: 121 DFLQHIALFGALLFFLGMKNTV-PKRQPKKKTPKTK 156
           DFLQHIALFGALLFFLGMK+T  PK+  KKKT K K
Sbjct: 121 DFLQHIALFGALLFFLGMKSTTSPKKPLKKKTQKAK 156

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BLAST of Sed0024026 vs. TAIR 10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 174.9 bits (442), Expect = 5.2e-44
Identity = 93/157 (59.24%), Postives = 121/157 (77.07%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSFLGR+LFAS+FILSA QMFN+FG +GGPAA EL+ K+ +   +LSS LGV++P++
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           E + +V    +LKGLGGLLFV G+  GA+LL + L + +P+LYDF+NY P +  FS+LL 
Sbjct: 61  EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query: 121 DFLQHIALFGALLFFLGMKN--TVPKRQPKKKTPKTK 156
           +FLQ +AL GALLFF+GMKN  T  KR  KK+TPK K
Sbjct: 121 EFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPK 157

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BLAST of Sed0024026 vs. TAIR 10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-43
Identity = 93/156 (59.62%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           MGFFSFLGR+LFAS+FILSA QMFN+    GGPAA EL+ K+ ++  +LSS+LGV +P I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFND----GGPAAKELAPKLDLVKAHLSSRLGVTLPKI 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           E R +V    +LKG+GGLLFV G++ GA+LL   L +F P+LYDF+NY P    FS+LL 
Sbjct: 61  EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 120

Query: 121 DFLQHIALFGALLFFLGMKNTVP-KRQPKKKTPKTK 156
           +FLQ +ALFGALLFF+GMKN+ P K+  KK+TPK K
Sbjct: 121 EFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPK 152

[Close]

BLAST of Sed0024026 vs. TAIR 10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 139.4 bits (350), Expect = 2.4e-33
Identity = 77/156 (49.36%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDI 60
           M   SFLGR LF S+F+LSA Q FN+FG +GG +A  L  K      ++++  G  +P +
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  EARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLG 120
           + + LV  + +LKG+GGLLFVFGSS+GA+LLLL  A+ TP+LYDF+NY      F  L  
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 DFLQHIALFGALLFFLGMKNTVPK-RQPKKKTPKTK 156
            F Q +AL G LLFF+GMKN+    RQ +KK PK K
Sbjct: 121 KFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAK 156

[Close]

BLAST of Sed0024026 vs. TAIR 10
Match: AT3G23175.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 0


Query: 1   MGFFSFLGRLLFASIFILSASQMFNEF--GNNGGPAAAELSLKVAVLSRNLSSKL----G 60
           M   +F GR+ F+ +F ++A Q + +   G  GGP    +   V +LS+  S  L    G
Sbjct: 20  MPAIAFFGRMAFSFVFFITAIQDYADHYGGGAGGPLEKTMGPAVNMLSKYGSKALTFYFG 79

Query: 61  VAIPDIEARHLVTISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPT 120
           + +   + R +     S K    L F+FG SI A+  LL   IF+ V+            
Sbjct: 80  MQVVAFDVRLIEFALISAKATAALWFIFGQSIPAY-FLLATQIFSTVI-----------P 139

Query: 121 FSILLGDFLQHIALFGALLFFLGMKNTVPKRQPKKKTPKTK 156
           F   L DF Q++ L GALL+++G+K+TV     ++K  +T+
Sbjct: 140 FPTNLNDFTQNLTLIGALLYYIGLKHTVDNLDDEEKNKQTE 168

[Close]

BLAST of Sed0024026 vs. TAIR 10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 38/119 (31.93%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 8   GRLLFASIFILSASQMFNEFGNNGGPAAAELSLKVAVLSRNLSSKLGVAIPDIEARHLVT 67
           GR++FAS F++SA + +  F    G AA EL  K+                  +A+ +V 
Sbjct: 25  GRVVFASAFLVSAWREYYGF----GLAADELRPKLGFFEN-------------QAKAIVA 84

Query: 68  ISSSLKGLGGLLFVFGSSIGAHLLLLQLAIFTPVLYDFFNYSPHNPTFSILLGDFLQHI 127
           +   +K +GG+LF+F + +GA LLL+  AI +P+LYDF+N       F++    F + +
Sbjct: 85  LGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKFKEFV 126

The following BLAST results are available for this feature:

BLAST of Sed0024026 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597378.1	6.6e-65	85.99	hypothetical protein SDJN03_10558, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023538935.1	1.9e-64	85.99	uncharacterized protein LOC111799718 [Cucurbita pepo subsp. pepo]	[more]
XP_022942464.1	5.6e-64	85.35	uncharacterized protein LOC111447492 [Cucurbita moschata]	[more]
XP_022975056.1	6.1e-63	84.71	uncharacterized protein LOC111474025 [Cucurbita maxima]	[more]
XP_022924237.1	1.1e-59	81.01	uncharacterized protein LOC111431764 [Cucurbita moschata]	[more]

BLAST of Sed0024026 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0024026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRE6	2.7e-64	85.35	uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC1114474...	[more]
A0A6J1ID53	3.0e-63	84.71	uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025...	[more]
A0A6J1E8C2	5.2e-60	81.01	uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC1114317...	[more]
A0A6J1ISL2	8.9e-60	80.38	uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010...	[more]
A0A1S3AXB3	1.7e-55	78.21	uncharacterized protein LOC103483616 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0024026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04340.1	5.2e-44	59.24	HR-like lesion-inducing protein-related	[more]
AT5G43460.1	1.5e-43	59.62	HR-like lesion-inducing protein-related	[more]
AT4G14420.1	2.4e-33	49.36	HR-like lesion-inducing protein-related	[more]
AT3G23175.1	4.2e-09	30.43	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	5.4e-09	31.93	HR-like lesion-inducing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 5..120 e-value: 5.7E-38 score: 130.2
None	No IPR available	PANTHER	PTHR31474:SF4	BNAA10G27800D PROTEIN	coord: 4..138
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 4..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024026.1	Sed0024026.1	mRNA
Sed0024026.2	Sed0024026.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane