Sed0024019 (gene) Chayote v1

Overview


Name	Sed0024019
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PIG-H domain-containing protein
Location	LG04: 14180897 .. 14183861 (+)
RNA-Seq Expression	Sed0024019
Synteny	Sed0024019

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCAATTCCATTCCTCCGGCGGCGAAACGGGAAGAGACGGCGGTGGAAGAGGGTTTTTTCGTAAGACCGGCGGCGGCGGCCGAGCAGCAGCCGTCTCTATTGTAGCTACTGGTCCAGATCAATCTTCTCGAGGTCAGATCTTCGTTTATTCAAGTTCAAACAGTGATCGATATTCAATTTCTTTACGCAATTCTGAAATGCCATCATAATATGGATTAGTCGTTATATCTTCTTCCTTATCACGTTTAGATTCGTTGAAATATGAAGAATTAACCAAAACAATTGCTGCACTGCGAAAGTTTTCTCAGAGTATCGCTCATTTTCTGAGAAATTTGAAGGGAATGGTAAAGTTTTCCATTACGGATTGGAGATACGGATACTTCTCCGACGGTAAGTTTCCATCTGAAGCAGTTGACATTCATCACGTTGTTGTTCTAAGGAATAGGAATGGTGAAAAGAGTTTTGTGTTGTGCATTTTGGCTGCCCTTGCCTTCTGTTTTTTTCTTCTCAAGGTAATTTGCCATTCTGATTTAATTTTAATGCGTCAATTGAAATTCAACATTAAATCTTTTCTCGTTTCTCTGATTTCTTGATTTCGAATTTTTTATGTATGTTACTTTTGTGTCCCTGCTTATTTGCTTCTTGTTTTCGGTGTATGTTTTAATTGTTCTGTACTTCTCAATTTTTATAGCTTTTGAATATGAGCTCTGTTTCAAGATGTAGGATTTGTTCTAGAGGTTGTGCATATGTGTCCTTTCTCTGAAATTTTTGTTAAGAAAACCTTCTGCTAATGAATACCATTTTAATGGATTGAATCAAACCTCCAAAACGTTTACATAATCTTAAGTTATCAATGGATAAGAATTGTTTGATATTCGAACAGTACTCTTGGAAATCTGTTGTTCTTTTTAGTGCATGATCAATTGACTATGAGTCTAACAGGGCCAGTCGATCTTTGTCGTCTTATGGTTCTTCGTTTTGAGTGTATTGTTTGCCAAGAAGTTGTTCAAAGGAAGAGTTGAGAAAGGTGAGGAATTGGGGAAGTTCTCTGTCTCATACTTTATAATGCAATTTTGTGTACCATTTATTGAAATTTAACTTCTTGTTGTTATCACATCCTTTTGATAAATGGGGACGTCTAAATGTGCAGAGTCTGTTATGGTTATGCCACATTTTGGAGTGCAACTTGAAACTCACTATCTAAGGTAACTTCGTCTTGCTGTAAGTTGTTTCATTGGCTTGGAGCCTTGAACTTTCTTATTGGCACTATATAACATCATGAGTTGGCATGGTTGTCAAGCACCTTCCTTGAAATTAATTTTTGGCAATTATCAGGTGCACTTAAGCTGGCTGAAAACACTCACGAATATTAAGAAAAACATATATAATATTGGCTAGTGAAGTTTGGTAATCCTCCGGGATTTTATATTATGAACTCTTCAAAACCTGCATCAGCAGTTCACTACACACATTTGGTCGTGCCTTTTGTATTAATTTTGCAGATTCTGCTTGGTTCTTACTGTTTCTTTGTTTCACTGTAGTGGAAAAGTCATCCGTCGGTTTGTGCCCGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGTAATTTTATTGTTTTTTGTTTTAATGTCCTTGCCTATCCCATGAGCCATGTGATAATGATATAGCTCTAATAAAGAGAGAGAAAATGTAGAATTGTTTTTCTCCCTCGTTCCCCACCTTTTACACAGATGCAATGGATCTATAATCTTTGAATAACCCAAATATAATTTATACAAACCTAAGTTTCTATAATTTGTTCTCTTGAACTATCATGGTTTAGGGATAATGATATAGGTAAGAGGTCATGAGGGCCCTCATGGTTCAATCTAGGGGTGGCACAATGGTTGAAGACTTGGGCTTTGAGGGTATGCTCTCCTCAAGGTCCCAAGTTCGAGACTCAGCTGTGACATTATTCCTTCGATGTCCCGATGCCTGGCCTAAGGACAGGCGTGGTTACCCTTGTTTAAAAAAAAATCTATGAATCTATGATTAAACATTACGGAGTAATCTAGTGGTCAAGAGGGTCTTGGGGAGCTTAGAGGTGATAAGTTTAATCTATGGCGACCATCTACCTAGAAATTAATTTTCTACAAATTTTTTTAACATCAAAATGTTGTAGGGTTAGGCGGTGTATCCCATAAGACCAGTCGAAGTGTATGCAAGTTGGCCGGGTATAAAAAAAAAACCTATCATGGTTAACTTAATAGTGAAGAGGGTCTTCGATAGTTGAGTGGTGATGAATTCAATACATGGTGGTCATTTATCTAAAAATTAATTTTCTATAGATTTCCTTGACAGCCTAGGACTAAGAAGCTATCTCGTGAGAATAGTCGACTCATGAATATTAAAAATAATCGTTTTTTTATGTAACGTAAACATAGATTACACAAAAGTCCCCAACAAACAGTGTAAAGTAAACATTAATTTGAGGGCTGTTCATTAAATTGTATCGTTTATGGCTGTTTAAAAATATTGTTCCTTGCTAGGAATTGCGTCCGCCAGTGAAAATGCTGGTTCCTATCTGGAAGGCTTTATGTGCTGCTACCGGTGATGATAAAAACAGAGATGCTTGTTCATAAGGCGTTCAGCAATCAACTGTAGTTCTTGTATATCATTTGGTTATTCTGATTAGAATCCAGTGGTGTTTGTAAATGTTTTAATCTTAGAAGTAATCTTGATTTTCTTTCTCTTCAATTAATTTTTCTTTGTCACTGCCAGTGGCTAATGATATCATTATGCAACATTGTTCGTTTGAAAAAAAATGAGCCTTGAAAAAAGAGTTGAGATTTGGAACCGGCTTATAACATATACATAACTTGATTATGTCTATTTTCAAACGTTTAA

mRNA sequence

TAGCAATTCCATTCCTCCGGCGGCGAAACGGGAAGAGACGGCGGTGGAAGAGGGTTTTTTCGTAAGACCGGCGGCGGCGGCCGAGCAGCAGCCGTCTCTATTGTAGCTACTGGTCCAGATCAATCTTCTCGAGATTCGTTGAAATATGAAGAATTAACCAAAACAATTGCTGCACTGCGAAAGTTTTCTCAGAGTATCGCTCATTTTCTGAGAAATTTGAAGGGAATGGTAAAGTTTTCCATTACGGATTGGAGATACGGATACTTCTCCGACGGTAAGTTTCCATCTGAAGCAGTTGACATTCATCACGTTGTTGTTCTAAGGAATAGGAATGGTGAAAAGAGTTTTGTGTTGTGCATTTTGGCTGCCCTTGCCTTCTGTTTTTTTCTTCTCAAGGGCCAGTCGATCTTTGTCGTCTTATGGTTCTTCGTTTTGAGTGTATTGTTTGCCAAGAAGTTGTTCAAAGGAAGAGTTGAGAAAGAGTCTGTTATGGTTATGCCACATTTTGGAGTGCAACTTGAAACTCACTATCTAAGTGGAAAAGTCATCCGTCGGTTTGTGCCCGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGAATTGCGTCCGCCAGTGAAAATGCTGGTTCCTATCTGGAAGGCTTTATGTGCTGCTACCGGTGATGATAAAAACAGAGATGCTTGTTCATAAGGCGTTCAGCAATCAACTGTAGTTCTTGTATATCATTTGGTTATTCTGATTAGAATCCAGTGGTGTTTGTAAATGTTTTAATCTTAGAAGTAATCTTGATTTTCTTTCTCTTCAATTAATTTTTCTTTGTCACTGCCAGTGGCTAATGATATCATTATGCAACATTGTTCGTTTGAAAAAAAATGAGCCTTGAAAAAAGAGTTGAGATTTGGAACCGGCTTATAACATATACATAACTTGATTATGTCTATTTTCAAACGTTTAA

Coding sequence (CDS)

ATGGTAAAGTTTTCCATTACGGATTGGAGATACGGATACTTCTCCGACGGTAAGTTTCCATCTGAAGCAGTTGACATTCATCACGTTGTTGTTCTAAGGAATAGGAATGGTGAAAAGAGTTTTGTGTTGTGCATTTTGGCTGCCCTTGCCTTCTGTTTTTTTCTTCTCAAGGGCCAGTCGATCTTTGTCGTCTTATGGTTCTTCGTTTTGAGTGTATTGTTTGCCAAGAAGTTGTTCAAAGGAAGAGTTGAGAAAGAGTCTGTTATGGTTATGCCACATTTTGGAGTGCAACTTGAAACTCACTATCTAAGTGGAAAAGTCATCCGTCGGTTTGTGCCCGTTGATAAAATTTTAAAACCAGTTCTCCTTGAATGCGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTGATTATACAAGGGGAAGACAAACTATTGCTGGTTTTCAAGGAATTGCGTCCGCCAGTGAAAATGCTGGTTCCTATCTGGAAGGCTTTATGTGCTGCTACCGGTGATGATAAAAACAGAGATGCTTGTTCATAA

Protein sequence

MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQSIFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKPVLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS

Homology

[Close]

BLAST of Sed0024019 vs. NCBI nr
Match: XP_038876673.1 (uncharacterized protein LOC120069067 [Benincasa hispida])

HSP 1 Score: 321.2 bits (822), Expect = 5.5e-84
Identity = 155/180 (86.11%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSITDWRYGYFSD K+PSEAVDIHHVVVLRNR+GEK F+ C  AALAFCFFLLKGQS
Sbjct: 1   MDKFSITDWRYGYFSDRKWPSEAVDIHHVVVLRNRSGEKGFLFCFFAALAFCFFLLKGQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IFV LW  VL+V F KKLFKG VEKE+VMV+P+FGVQLETH+ SGKVIRRFVPVDKILKP
Sbjct: 61  IFVALWCLVLNVFFGKKLFKGTVEKETVMVLPNFGVQLETHFRSGKVIRRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLEC+TPVTCYWSLSLI+QGED+LLLVFKELRPPVKMLVPIWKALC ATGDDKNRDACS
Sbjct: 121 VLLECLTPVTCYWSLSLILQGEDELLLVFKELRPPVKMLVPIWKALCTATGDDKNRDACS 180

[Close]

BLAST of Sed0024019 vs. NCBI nr
Match: XP_008448466.1 (PREDICTED: uncharacterized protein LOC103490645 [Cucumis melo] >XP_008448467.1 PREDICTED: uncharacterized protein LOC103490645 [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 149/180 (82.78%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSI+D RYGYFSD K+PSEAV +HHVVVLRN   EK F+ C+ AALAFCFFLLKGQS
Sbjct: 1   MAKFSISDRRYGYFSDCKWPSEAVHVHHVVVLRNTTAEKGFLFCVFAALAFCFFLLKGQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IFV LW  VL+V F KKLFKG VEKESVMVMP+FGVQLETH+ SGKV+RRFVPVDKILKP
Sbjct: 61  IFVALWCLVLNVFFFKKLFKGSVEKESVMVMPNFGVQLETHFRSGKVLRRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLEC+TPVTCYWSLSLI+QGED+LLLVFKELRPPVKMLVPIWKALC ATGDDKN DACS
Sbjct: 121 VLLECLTPVTCYWSLSLIVQGEDELLLVFKELRPPVKMLVPIWKALCTATGDDKNGDACS 180

[Close]

BLAST of Sed0024019 vs. NCBI nr
Match: XP_022946831.1 (uncharacterized protein LOC111450501 [Cucurbita moschata])

HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79
Identity = 153/180 (85.00%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSITDWRYGYFSD K+ SEAVDIHHVVVLRNR+  K F+  ILAALAFCFF+LKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IFVVLW ++L+VLFAKKLFKG V+KESVMVMP+FGVQLETHY SGKVI RFVPVDKILKP
Sbjct: 61  IFVVLWCWILNVLFAKKLFKGTVQKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCA     KN+DACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 176

[Close]

BLAST of Sed0024019 vs. NCBI nr
Match: KAG7027831.1 (hypothetical protein SDJN02_09008, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79
Identity = 154/180 (85.56%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSITDWRYGYFSD K+ SEAVDIHHVVVLRNR+  K F+  ILAALAFCFF+LKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IF VLW +VL+VLFAKKLFKG VEKESVMVMP+FGVQLETHY SGKVI RFVPVDKILKP
Sbjct: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCA     KN+DACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 176

[Close]

BLAST of Sed0024019 vs. NCBI nr
Match: KAG6596280.1 (hypothetical protein SDJN03_09460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79
Identity = 154/180 (85.56%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSITDWRYGYFSD K+ SEAVDIHHVVVLRNR+  K F+  ILAALAFCFF+LKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IF VLW +VL+VLFAKKLFKG VEKESVMVMP+FGVQLETHY SGKVI RFVPVDKILKP
Sbjct: 61  IFAVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYASGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCA     KN+DACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 176

[Close]

BLAST of Sed0024019 vs. ExPASy TrEMBL
Match: A0A1S3BKL9 (uncharacterized protein LOC103490645 OS=Cucumis melo OX=3656 GN=LOC103490645 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.8e-80
Identity = 149/180 (82.78%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSI+D RYGYFSD K+PSEAV +HHVVVLRN   EK F+ C+ AALAFCFFLLKGQS
Sbjct: 1   MAKFSISDRRYGYFSDCKWPSEAVHVHHVVVLRNTTAEKGFLFCVFAALAFCFFLLKGQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IFV LW  VL+V F KKLFKG VEKESVMVMP+FGVQLETH+ SGKV+RRFVPVDKILKP
Sbjct: 61  IFVALWCLVLNVFFFKKLFKGSVEKESVMVMPNFGVQLETHFRSGKVLRRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLEC+TPVTCYWSLSLI+QGED+LLLVFKELRPPVKMLVPIWKALC ATGDDKN DACS
Sbjct: 121 VLLECLTPVTCYWSLSLIVQGEDELLLVFKELRPPVKMLVPIWKALCTATGDDKNGDACS 180

[Close]

BLAST of Sed0024019 vs. ExPASy TrEMBL
Match: A0A6J1G4Q1 (uncharacterized protein LOC111450501 OS=Cucurbita moschata OX=3662 GN=LOC111450501 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 153/180 (85.00%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSITDWRYGYFSD K+ SEAVDIHHVVVLRNR+  K F+  ILAALAFCFF+LKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IFVVLW ++L+VLFAKKLFKG V+KESVMVMP+FGVQLETHY SGKVI RFVPVDKILKP
Sbjct: 61  IFVVLWCWILNVLFAKKLFKGTVQKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCA     KN+DACS
Sbjct: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 176

[Close]

BLAST of Sed0024019 vs. ExPASy TrEMBL
Match: A0A6J1I1U0 (uncharacterized protein LOC111470129 OS=Cucurbita maxima OX=3661 GN=LOC111470129 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.4e-79
Identity = 154/180 (85.56%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSITDWRYGYFSD K+ SEAVDIHHVVVLRNR+  K F+  ILAALAFCFF+LKGQS
Sbjct: 1   MAKFSITDWRYGYFSDSKWQSEAVDIHHVVVLRNRSNGKGFLFYILAALAFCFFILKGQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IFVVLW +VL+VLFAKKLFKG VEKESVMVMP+FGVQLETHY SGKVI RFVPVDKILKP
Sbjct: 61  IFVVLWCWVLNVLFAKKLFKGTVEKESVMVMPNFGVQLETHYTSGKVICRFVPVDKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VL ECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCA     KN+DACS
Sbjct: 121 VLHECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAG----KNKDACS 176

[Close]

BLAST of Sed0024019 vs. ExPASy TrEMBL
Match: A0A6J1DVP3 (uncharacterized protein LOC111024811 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024811 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.2e-77
Identity = 146/180 (81.11%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSIT+WRYGYF D K PSEAVDIHHVVV R++ G K F+LCI AALAFCFFLLK QS
Sbjct: 1   MAKFSITNWRYGYFRDSKGPSEAVDIHHVVVRRSKGGGKGFLLCIFAALAFCFFLLKDQS 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IFVV W  VL+V FAKKLF+G VEKESV VMP+FGVQLETHY SGKVIR+FVPVDK+LK 
Sbjct: 61  IFVVFWCLVLNVFFAKKLFRGMVEKESVTVMPNFGVQLETHYRSGKVIRQFVPVDKLLKS 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLECVTPVTCYW LSLIIQGEDKLLLVFKELRPP+KM VPIWKAL AATG++ NRDACS
Sbjct: 121 VLLECVTPVTCYWILSLIIQGEDKLLLVFKELRPPLKMXVPIWKALSAATGNNNNRDACS 180

[Close]

BLAST of Sed0024019 vs. ExPASy TrEMBL
Match: A0A0A0L3J5 (PIG-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G000720 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.2e-77
Identity = 143/180 (79.44%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MVKFSITDWRYGYFSDGKFPSEAVDIHHVVVLRNRNGEKSFVLCILAALAFCFFLLKGQS 60
           M KFSI+D RYGYFSD K+PSEAV +HHVVVLRN   EK F+ C+ A LA CFFLLKG+S
Sbjct: 1   MAKFSISDRRYGYFSDCKWPSEAVHVHHVVVLRNTTAEKGFLFCVFAVLALCFFLLKGES 60

Query: 61  IFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFVPVDKILKP 120
           IFV LW  VL+V F KKLFKGRVEKESV+VMP+FGVQLETH+ SGKVIRRFVPV KILKP
Sbjct: 61  IFVALWCLVLNVFFFKKLFKGRVEKESVIVMPNFGVQLETHFRSGKVIRRFVPVGKILKP 120

Query: 121 VLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGDDKNRDACS 180
           VLLEC+TPVTCYWSLSLI++GED+LLLVFKELRPPVKMLVP+WKALC ATGDDKN D CS
Sbjct: 121 VLLECLTPVTCYWSLSLIVKGEDELLLVFKELRPPVKMLVPVWKALCTATGDDKNGDDCS 180

[Close]

BLAST of Sed0024019 vs. TAIR 10
Match: AT4G35530.1 (phosphatidylinositolglycan-related )

HSP 1 Score: 174.5 bits (441), Expect = 7.8e-44
Identity = 94/181 (51.93%), Postives = 121/181 (66.85%), Query Frame = 0


Query: 1   MVKFSITDWRYGYF--SDGKFPSEAVDIHHVVVLRN------RNGEKSFVLCILAALAFC 60
           MV  S+++ RY Y   S  K   EA+DIHHV++  +      R     F L  LA+  + 
Sbjct: 1   MVSLSVSNKRYTYIHESGSKSTREAIDIHHVIINGSSGTGYARRWGLGFFLVFLASSMY- 60

Query: 61  FFLLKGQSIFVVLWFFVLSVLFAKKLFKGRVEKESVMVMPHFGVQLETHYLSGKVIRRFV 120
           F L K      + W  +LS        +  V+KESV+++P FG+QLET YLSGK + RF+
Sbjct: 61  FLLGKDNPARTLSWGCLLSGFLVMLHSRKFVKKESVIILPTFGIQLETQYLSGKTVSRFI 120

Query: 121 PVDKILKPVLLECVTPVTCYWSLSLIIQGEDKLLLVFKELRPPVKMLVPIWKALCAATGD 174
           P+DKILKPVL+ECVTP+TCYWSLSL ++GE++L LVFKELRPP+KMLVPIWKALCAA G 
Sbjct: 121 PIDKILKPVLVECVTPITCYWSLSLFLRGEEQLTLVFKELRPPLKMLVPIWKALCAAIGT 180

The following BLAST results are available for this feature:

BLAST of Sed0024019 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876673.1	5.5e-84	86.11	uncharacterized protein LOC120069067 [Benincasa hispida]	[more]
XP_008448466.1	1.4e-79	82.78	PREDICTED: uncharacterized protein LOC103490645 [Cucumis melo] >XP_008448467.1 P...	[more]
XP_022946831.1	4.1e-79	85.00	uncharacterized protein LOC111450501 [Cucurbita moschata]	[more]
KAG7027831.1	4.1e-79	85.56	hypothetical protein SDJN02_09008, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6596280.1	4.1e-79	85.56	hypothetical protein SDJN03_09460, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0024019 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0024019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BKL9	6.8e-80	82.78	uncharacterized protein LOC103490645 OS=Cucumis melo OX=3656 GN=LOC103490645 PE=...	[more]
A0A6J1G4Q1	2.0e-79	85.00	uncharacterized protein LOC111450501 OS=Cucurbita moschata OX=3662 GN=LOC1114505...	[more]
A0A6J1I1U0	4.4e-79	85.56	uncharacterized protein LOC111470129 OS=Cucurbita maxima OX=3661 GN=LOC111470129...	[more]
A0A6J1DVP3	9.2e-77	81.11	uncharacterized protein LOC111024811 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0L3J5	9.2e-77	79.44	PIG-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G000720 PE=3 ...	[more]

BLAST of Sed0024019 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35530.1	7.8e-44	51.93	phosphatidylinositolglycan-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019328	GPI-GlcNAc transferase complex, PIG-H component, conserved domain	PFAM	PF10181	PIG-H	coord: 87..150 e-value: 5.7E-14 score: 51.7
IPR044215	Phosphatidylinositol N-acetylglucosaminyltransferase subunit H	PANTHER	PTHR15231	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H	coord: 5..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0024019.1	Sed0024019.1	mRNA
Sed0024019.2	Sed0024019.2	mRNA
Sed0024019.3	Sed0024019.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006506	GPI anchor biosynthetic process
cellular_component	GO:0000506	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0017176	phosphatidylinositol N-acetylglucosaminyltransferase activity