Sed0023956 (gene) Chayote v1

Overview


Name	Sed0023956
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ribonuclease 3-like protein 2
Location	LG11: 32266231 .. 32268786 (+)
RNA-Seq Expression	Sed0023956
Synteny	Sed0023956

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCCATTCCCCAACAGTAAGTTTAAATCTCATTAACGTTATTAAAAAAAATAACAAAACAAAACAAAAAAGAAGTCATCAGTAACGTCGGAAGCAGAGGTCACTCGCCTCCCCGTCGCCGCCGCCGGCATCTGAAGTCAGAACTGTAGCTCGCCGGAGAAGATGGAAAACTCGGTGCTAGCGGCGGAGCGCATCGTTTCCTACAATTTCAAGAACAAGAAGCTTTTAGAGGAAGCCCTAACCCATTCCTCATACACAGAATCAGCCTCGTATGAGCGCCTCGAGTTCATCGGCGACGTAGCCATTAGCCTCGCCATTAGCAATTACTTTTTTCTTGCTTATCCAGATCTCGACCAGGGCCGGCTCTCTTTAATCAGGTCTGCCAACATCAGCACCGAGAATCTTGCTCGTGTTGCGGTCCGCCATGGATTGTATCATTATGTGAGGCGCAACGCCGCCGCTTTGGATGATAAGGTATTTGATTTCACGTTCGCCTTTTGATTTGATTTCTGATTTCAAATTTATTTGTGTTTGTTGACTGTCTAGGTTAGAGAGTTCGCCGATTCGGTTGCCCTAGAAGACAAATCGGTTCCTTATGGTGGGTTGGTTAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGACGTTGGATTTGATCTTCAAAGGTTATGGGTGGTGAGTTCTTGGATAAATTTGAAGTTAGGGTGTTATGGTTTGGGTTGGATTGAGTTGAGTTAAAGAGAATTTTTGGGACCTACAAAAAATTTCCAGTGGATCAATCCACCACTCGTACAGGACTCTATTAGAGTAACCCGACCTACCTATACATTTCCGGGTTGAGTTATCTAGTTGTATTTTTCTCTTTTTTTTCACTTTTCAGTCCAATCCATAATTTATAAATAGGTAAAAAAAAGAAAAATGGCATGAAATTAAACGCAAACTCAAAATGTGTCTTTCATTAGCGTATGTTTCCCACTAATATGTTTAAGAACTTATTTTATTAGTTAATCGCACTCACAAGTATGTTTTAATTTGGGTTGAATTGGGTTGAGCGAGTTAGAAATGGACTAATTTAAGAACCGACTCAACTCAACCTAAAGAAAAGTGCAAACTTATATCTCAATCCTTACGGTTTGGGTTGGATATGGTTGGATATGGTAGTTTGAGTTGCTCTGGATGTTGGTTCTTTTCTACCCCTATTTGAAAGTATAATTTTGAGCACTTTACCAGCTGGGCAACAATTAGTTTCTGTTTTTAATCTTTTTGTAGATTATTAGGGGTTTGCTAGAGCCCATTTATACTCCTGACGACTTACTGGTAGAGGCTCAACCTGTGACTTTGCTGTTTGAAGTTTGCCAAAAAAATGGTAAGCAAGTTGATATTAAGAATGAGATAATCGGCTCCGAGAATGTTGCTCGGGTTTATGTTGATGGCAAACTTGTGGCCTCTGGTTCTTCAATGCAAAAAGAAATTGCAAGGCTTAATGCTGCAAGAGAAGCTCTCATTGAACTGTCAAAATCTATGGATACGAATATTGGAATGGCTGTAACGATTGATGGTATTGATGAAACTTTTGAAATTGAAGGGGCAAAGCAAAAGTTACATGATTTTTGTTGCAAGAAGAAGTGGACGAAACCGAATTACAGGTATAATATTTCAGATGTTGTGTGCTTGCGTTATGTGGACCCGAATTCAGATGTTTTTCAACACATTTATATATTCAGTAAATAATGTAAATGAAACTTGAACAACTCATACCACGGTTTGATCTAGCGGATCTCTAGAAACTAAGATAGTATAGATTCAGTCTTGGTAGCTACACGACCCACATCTACATAGGAATCAATTTCCTATGGAATTGTTCCATGAAAATAGTTGAAATGCACGTAAACTCACTCACAGATACAAGAAGAATATCATTTAACTACCATATAGTTCTTTCTTGACTATCTTTCTCTGCGGATTATGCAACTTGTGACAGGAAAACTAAATACTTTTTGTGTTCTTTTCTACTTGCAGTATTGAGAAAGATTTAGGGCCTTCACATGAAAAGAGATTTGTATGTTCTGTTAAAATTGGCACTACTTCTGATACAACACTCTGTATAACGGGAGATGAGAAGTCTAGAGTAAGGGATGCAGAGAATTCTGCAGCCTCTTTGATGATTCGTGCTTTACAGGAAAGAAACTATCTCTGAGCATTATTATTATCATCATTATTCAATTAGATAGAATGTAGTATATTGTATAATGTGTCCTAGTATGCTTAGGAACATTTCTGCTCATTGTCTGTCTAAGCTTGTTGCGAATGATTCGCTTTTGTGGAGTGAGCCGAGTCCGTTTGAGGATTATGACGTCTAACTATATACGCGCCTTCTAGGAGGGTTCGCATTTGTCGCGAGCTGAGTCCGTTTGAGGATTATGACGGCTAACTATATGGCGCCTTCTACGAGGGTAGGTATTCTACTTGCCTTTCTGGCTAAAATAAATTGTATCAAATTCAGTATTTATTACAATGTAATATTCAAAAAGC

mRNA sequence

ACTCCATTCCCCAACAGTAAGTTTAAATCTCATTAACGTTATTAAAAAAAATAACAAAACAAAACAAAAAAGAAGTCATCAGTAACGTCGGAAGCAGAGGTCACTCGCCTCCCCGTCGCCGCCGCCGGCATCTGAAGTCAGAACTGTAGCTCGCCGGAGAAGATGGAAAACTCGGTGCTAGCGGCGGAGCGCATCGTTTCCTACAATTTCAAGAACAAGAAGCTTTTAGAGGAAGCCCTAACCCATTCCTCATACACAGAATCAGCCTCGTATGAGCGCCTCGAGTTCATCGGCGACGTAGCCATTAGCCTCGCCATTAGCAATTACTTTTTTCTTGCTTATCCAGATCTCGACCAGGGCCGGCTCTCTTTAATCAGGTCTGCCAACATCAGCACCGAGAATCTTGCTCGTGTTGCGGTCCGCCATGGATTGTATCATTATGTGAGGCGCAACGCCGCCGCTTTGGATGATAAGGTTAGAGAGTTCGCCGATTCGGTTGCCCTAGAAGACAAATCGGTTCCTTATGGTGGGTTGGTTAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGACGTTGGATTTGATCTTCAAAGGTTATGGGTGATTATTAGGGGTTTGCTAGAGCCCATTTATACTCCTGACGACTTACTGGTAGAGGCTCAACCTGTGACTTTGCTGTTTGAAGTTTGCCAAAAAAATGGTAAGCAAGTTGATATTAAGAATGAGATAATCGGCTCCGAGAATGTTGCTCGGGTTTATGTTGATGGCAAACTTGTGGCCTCTGGTTCTTCAATGCAAAAAGAAATTGCAAGGCTTAATGCTGCAAGAGAAGCTCTCATTGAACTGTCAAAATCTATGGATACGAATATTGGAATGGCTGTAACGATTGATGGTATTGATGAAACTTTTGAAATTGAAGGGGCAAAGCAAAAGTTACATGATTTTTGTTGCAAGAAGAAGTGGACGAAACCGAATTACAGTATTGAGAAAGATTTAGGGCCTTCACATGAAAAGAGATTTGTATGTTCTGTTAAAATTGGCACTACTTCTGATACAACACTCTGTATAACGGGAGATGAGAAGTCTAGAGTAAGGGATGCAGAGAATTCTGCAGCCTCTTTGATGATTCGTGCTTTACAGGAAAGAAACTATCTCTGAGCATTATTATTATCATCATTATTCAATTAGATAGAATGTAGTATATTGTATAATGTGTCCTAGTATGCTTAGGAACATTTCTGCTCATTGTCTGTCTAAGCTTGTTGCGAATGATTCGCTTTTGTGGAGTGAGCCGAGTCCGTTTGAGGATTATGACGTCTAACTATATACGCGCCTTCTAGGAGGGTTCGCATTTGTCGCGAGCTGAGTCCGTTTGAGGATTATGACGGCTAACTATATGGCGCCTTCTACGAGGGTAGGTATTCTACTTGCCTTTCTGGCTAAAATAAATTGTATCAAATTCAGTATTTATTACAATGTAATATTCAAAAAGC

Coding sequence (CDS)

ATGGAAAACTCGGTGCTAGCGGCGGAGCGCATCGTTTCCTACAATTTCAAGAACAAGAAGCTTTTAGAGGAAGCCCTAACCCATTCCTCATACACAGAATCAGCCTCGTATGAGCGCCTCGAGTTCATCGGCGACGTAGCCATTAGCCTCGCCATTAGCAATTACTTTTTTCTTGCTTATCCAGATCTCGACCAGGGCCGGCTCTCTTTAATCAGGTCTGCCAACATCAGCACCGAGAATCTTGCTCGTGTTGCGGTCCGCCATGGATTGTATCATTATGTGAGGCGCAACGCCGCCGCTTTGGATGATAAGGTTAGAGAGTTCGCCGATTCGGTTGCCCTAGAAGACAAATCGGTTCCTTATGGTGGGTTGGTTAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGACGTTGGATTTGATCTTCAAAGGTTATGGGTGATTATTAGGGGTTTGCTAGAGCCCATTTATACTCCTGACGACTTACTGGTAGAGGCTCAACCTGTGACTTTGCTGTTTGAAGTTTGCCAAAAAAATGGTAAGCAAGTTGATATTAAGAATGAGATAATCGGCTCCGAGAATGTTGCTCGGGTTTATGTTGATGGCAAACTTGTGGCCTCTGGTTCTTCAATGCAAAAAGAAATTGCAAGGCTTAATGCTGCAAGAGAAGCTCTCATTGAACTGTCAAAATCTATGGATACGAATATTGGAATGGCTGTAACGATTGATGGTATTGATGAAACTTTTGAAATTGAAGGGGCAAAGCAAAAGTTACATGATTTTTGTTGCAAGAAGAAGTGGACGAAACCGAATTACAGTATTGAGAAAGATTTAGGGCCTTCACATGAAAAGAGATTTGTATGTTCTGTTAAAATTGGCACTACTTCTGATACAACACTCTGTATAACGGGAGATGAGAAGTCTAGAGTAAGGGATGCAGAGAATTCTGCAGCCTCTTTGATGATTCGTGCTTTACAGGAAAGAAACTATCTCTGA

Protein sequence

MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAYPDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVPYGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLFEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSMDTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKIGTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL

Homology

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BLAST of Sed0023956 vs. NCBI nr
Match: XP_022965096.1 (ribonuclease 3-like protein 2 [Cucurbita maxima])

HSP 1 Score: 536.6 bits (1381), Expect = 1.6e-148
Identity = 277/339 (81.71%), Postives = 300/339 (88.50%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           ME+SVLA E IVSYNFKNKKLLEEALTHSSY ESASY+RLEFIGD AI LA +NYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           PDL QG+LSL+R+ANISTE LARVAVRHGLYHYVRR A ALDDKVREF DSVALE+ SVP
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGL+KAPKVLADIVESVAGAIYVDV FDLQRLWVIIRGLLEPIYTP+DL VE QPVT+L
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           FEVCQKNGKQVDIKN   GS+ V+ V+VDG  VASGSS  KEIARLNAAREAL +LSK+M
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGTFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           D NI  AVTIDGIDE+FEIEGAKQKLHDFCCKKKW KPNYS EKD GPSH+KRF CSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
            T+S   L + GDEKSRV+D+ENSAAS+MIRALQE+ YL
Sbjct: 301 STSSG-MLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Sed0023956 vs. NCBI nr
Match: XP_023551903.1 (ribonuclease 3-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535.8 bits (1379), Expect = 2.7e-148
Identity = 277/339 (81.71%), Postives = 300/339 (88.50%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           ME+SVLA E IVSYNFKNKKLLEEALTHSSY ESASY+RLEFIGD AI LA +NYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           PDL QG+LSL+R+ANISTE LARVAVRHGLYHYVRR A ALDDKVREF DSVALE+ SVP
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGL+KAPKVLADIVESVAGAIYVDV FDLQRLWVIIRGLLEPIYTP+DL VE QPVT+L
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           FEVCQKNGKQVDIKN   GS+ V+ V+VDG  VASGSS  KEIARLNAAREAL +LSK+M
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           D NI  AVTIDGIDE+FEIEGAKQKLHDFCCKKKW KPNYS EKD GPSH+KRF CSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
            T+S   L + GDEKSRV+D+ENSAAS+MIRALQE+ YL
Sbjct: 301 STSSG-MLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Sed0023956 vs. NCBI nr
Match: KAG6577457.1 (Ribonuclease 3-like protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015528.1 Ribonuclease 3-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 533.5 bits (1373), Expect = 1.3e-147
Identity = 276/339 (81.42%), Postives = 299/339 (88.20%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           ME+SVLA E IVSYNFKNKKLLEEALTHSSY ESASY+RLEFIGD AI LA +NYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           PDL QG+LSL+R+ANISTE LARVAVRHGLYHYVRR A ALDDKVREF DSVALE+ SVP
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGL+KAPKVLADIVESVAGAIYVDV FDLQRLWVIIRGLLEPIYTP+DL VE QPVT+L
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           FEVCQKNGKQVDIKN   GS+ V+ V+VDG  VASGSS  KEIARLNAAREAL +LSK+M
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           D NI  AVTIDGIDE+FEIEGAKQKLHDFCCKKKW KPNYS EKD GPSH+KRF CSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
            + S   L + GDEKSRV+D+ENSAAS+MIRALQE+ YL
Sbjct: 301 SSPSG-MLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Sed0023956 vs. NCBI nr
Match: XP_038903239.1 (ribonuclease 3-like protein 2 [Benincasa hispida])

HSP 1 Score: 532.7 bits (1371), Expect = 2.3e-147
Identity = 280/339 (82.60%), Postives = 298/339 (87.91%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           ME+SV AAERI+SYNFKNKKLLEEALTHSSY +SASYERLEFIGD AI LAISNYFFLA+
Sbjct: 1   MESSVRAAERILSYNFKNKKLLEEALTHSSYPDSASYERLEFIGDSAIGLAISNYFFLAF 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           PDL QG+LSL+R+ANISTE LARVAVR GLY+YVRRNAAALDDKVREF DSVALE+ SV 
Sbjct: 61  PDLHQGQLSLLRAANISTEKLARVAVRLGLYNYVRRNAAALDDKVREFVDSVALENNSVA 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGLVKAPKVLADIVESVAGA+Y+DV FDLQRLWVIIRGLLEPIYT + L VE QPVTLL
Sbjct: 121 YGGLVKAPKVLADIVESVAGAVYIDVNFDLQRLWVIIRGLLEPIYTLESLQVEPQPVTLL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           FEVCQKNGKQVDIKN   G  NV  VYVDG  VAS SSMQKEIA+L+AAREAL+ELS  M
Sbjct: 181 FEVCQKNGKQVDIKNWKNGPNNVVSVYVDGSFVASSSSMQKEIAKLSAAREALVELSNHM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           DTN    VTIDGIDE+FEIEGAK KLHDFCCKKKW KP YS EKDLGPSHEKRFVCSV I
Sbjct: 241 DTNTKTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPTYSTEKDLGPSHEKRFVCSVII 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
            T SD TL + GDEKSRV+DAENSAASLMIRALQERNYL
Sbjct: 301 STPSD-TLYMLGDEKSRVKDAENSAASLMIRALQERNYL 338

[Close]

BLAST of Sed0023956 vs. NCBI nr
Match: XP_022932283.1 (ribonuclease 3-like protein 2 [Cucurbita moschata])

HSP 1 Score: 528.9 bits (1361), Expect = 3.3e-146
Identity = 273/339 (80.53%), Postives = 297/339 (87.61%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           ME+SVLA E IVSYNFKNKKLLEEALTHSSY ESASY+RLEFIGD AI LA +NYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           PDL QG+LSL+R+ANISTE LARVAVRHGLYHYVRR A ALDDKVREF DSVALE+ S+P
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSIP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGL+KAPKVLADIVESVAGAIYVDV FDLQRLWVIIRGLLEPIYTP+DL VE QPVT+L
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           FEVCQKNGKQVDIKN   GS+ V+ V+VDG  VASGSS  K IARLNAAREAL ++SK+M
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKVIARLNAAREALAKMSKTM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           D NI  AVTIDGIDE+FEIEGAKQKLHDFCCKKKW KPNYS EKD GPSH+KRF CSVKI
Sbjct: 241 DINIRAAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
              S   L + GDEKSRV+D+ENSAAS+MIRALQE+ YL
Sbjct: 301 SPPSG-MLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Sed0023956 vs. ExPASy Swiss-Prot
Match: Q9LTQ0 (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 6.5e-97
Identity = 187/337 (55.49%), Postives = 254/337 (75.37%), Query Frame = 0


Query: 4   SVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAYPDL 63
           S+ A E+I++Y F NK LL+EA+TH+S T+  SYERLEFIGD AI LAISNY +L YP L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  DQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDK-SVPYG 123
           +   LSL+R+AN+STE LARV++ HGLY ++RRNA +LD+KV+EF+++V  ED  SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 GLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLFE 183
           GLVKAPKVLAD+ ES+AGA+YVDV FDLQRLWVI RGLLEPI T DDL  + QPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSMDT 243
           +C K+ K++DIKN   G+ ++A +Y+D +L+ASG +  K+IARL AA+EAL +LS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFP- 298

Query: 244 NIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKIGT 303
            + M +  D ++   ++  AK KL++ C KKKW KP YS+E+D      KRFVCS KI  
Sbjct: 299 -VEMVIDEDSVE--IQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
           T + TL + GDE+S+++ AE+S+A  MIRAL++ +YL
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]

BLAST of Sed0023956 vs. ExPASy Swiss-Prot
Match: Q6ATG6 (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 2.3e-62
Identity = 137/276 (49.64%), Postives = 183/276 (66.30%), Query Frame = 0


Query: 9   ERIVSYNFKNKKLLEEALTHSSYTESA-SYERLEFIGDVAISLAISNYFFLAYPDLDQGR 68
           ER++ Y F++ +LLEEALTH S+ + A SY+RLEF+GD A+ LA SN+ +L  P L  G 
Sbjct: 41  ERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPGP 100

Query: 69  LSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDK----SVPYGG 128
           LS +R+ANISTE LARVAVRH LY  +RRN   LD  V +F ++V  E +    +VPYGG
Sbjct: 101 LSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYGG 160

Query: 129 -LVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLFE 188
            +VKAPKVLADIVE++A A+YVD  FDL++LW + R L EPI T +   ++ QPVT+L E
Sbjct: 161 SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE--TIDEQPVTMLHE 220

Query: 189 VCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSMDT 248
           +CQK+GK    K    G   V  V+V G+LV  GSS QK IA+LNAAR+A  +L+ +   
Sbjct: 221 LCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKKQ 280

Query: 249 NIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKP 279
            +   V     DE  E+   KQKL++ C ++ W KP
Sbjct: 281 VLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKP 314

[Close]

BLAST of Sed0023956 vs. ExPASy Swiss-Prot
Match: Q9FKF0 (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.2e-54
Identity = 141/391 (36.06%), Postives = 208/391 (53.20%), Query Frame = 0


Query: 3   NSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAYPD 62
           NSV A E+I++Y+F NK LL+EA+T     +S  ++RLEF GD  + +A +NY    YP+
Sbjct: 2   NSVEAVEKILNYSFVNKTLLKEAITQ----KSPLFDRLEFFGDSILEVAFTNYICHTYPN 61

Query: 63  LDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVPYG 122
           L    L  +R+AN+S E  AR+AV H L+H++     +L  KV+ FA++V  ED  VPYG
Sbjct: 62  LKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYG 121

Query: 123 GLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQ-PVTLLF 182
           GLVKAPK+LAD +ES+A  +++DV +D++RLW I R LLEPIYTPDDLL++ + P   LF
Sbjct: 122 GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTLF 181

Query: 183 EVCQKNGKQ-----------------------VDIKN------EIIGSE----------- 242
            +  K+G +                       VD+++      EI  +E           
Sbjct: 182 RLADKHGSESTSGIRKMTTSTKILLRNKDCLDVDLEDVKGKSFEICSTELFSLSTVSENS 241

Query: 243 -----------------NVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSMDTNI 302
                            NV    V GKL     + + +I   ++      E+     T  
Sbjct: 242 LTDEMSQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQIQTGSSGNPLTYEM-----TTK 301

Query: 303 GMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKIGTTS 335
            M V  D +    E    + +L + C K KW +P +S++++ GP +E +FVCSVKI   +
Sbjct: 302 QMVVDKDSLH--VEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPN 361

[Close]

BLAST of Sed0023956 vs. ExPASy Swiss-Prot
Match: Q9SP32 (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 1.9e-51
Identity = 130/347 (37.46%), Postives = 190/347 (54.76%), Query Frame = 0


Query: 9    ERIVSYNFKNKKLLEEALTHSSYTES--ASYERLEFIGDVAISLAISNYFFLAYPDLDQG 68
            ER + Y FK K LL EA+TH+S   S  + Y+RLEF+GD  +   I+ + F  Y  L  G
Sbjct: 1563 ERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPG 1622

Query: 69   RLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVPYG---- 128
            RL+ +R+A ++ EN ARVAV+H L+ Y+R  ++AL+ ++REF   V  E     +     
Sbjct: 1623 RLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGL 1682

Query: 129  GLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLFE 188
            G  KAPKVL DIVES+AGAI++D G D    W + + LL+P+ TP+ L     PV  L E
Sbjct: 1683 GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETL--PMHPVRELQE 1742

Query: 189  VCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIEL------ 248
             CQ+  + ++ K    G+     V++DG  V    + QK++A+  AAR AL  L      
Sbjct: 1743 RCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIA 1802

Query: 249  -SKSMDTNIGMAVTIDGIDETFEIEG-----AKQKLHDFCCKKKWTKPNYSIEKDLGPSH 308
             SK    N G A    G +E    +       +Q L+D C +K W  P+Y   K+ GP+H
Sbjct: 1803 ESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAH 1862

Query: 309  EKRFVCSVKIGTTSD--TTLCITGDEKSRVRDAENSAASLMIRALQE 336
             KRF   V++ T+    T  CI G+    V+ A++SAA L++  L +
Sbjct: 1863 AKRFTFGVRVNTSDRGWTDECI-GEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]

BLAST of Sed0023956 vs. ExPASy Swiss-Prot
Match: Q8LMR2 (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.7e-50
Identity = 124/331 (37.46%), Postives = 189/331 (57.10%), Query Frame = 0


Query: 11   IVSYNFKNKKLLEEALTHSSYTES--ASYERLEFIGDVAISLAISNYFFLAYPDLDQGRL 70
            ++   F+NK LL EA+TH+S   S  + Y+RLEF+GD  +   I+ + F  Y DL  GRL
Sbjct: 1544 VLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRL 1603

Query: 71   SLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVPYG----GL 130
            + +R+A ++ EN ARVAV+H L+ ++R  ++AL+ ++REF   V  E     +     G 
Sbjct: 1604 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFGLGD 1663

Query: 131  VKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLFEVC 190
             KAPKVL DIVES+AGAI++D G+D   +W + + LL P+ TP+ L     PV  L E C
Sbjct: 1664 CKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETL--PMHPVRELQERC 1723

Query: 191  QKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSMDTNI 250
            Q+  + ++ K    G+     V+VDG  +    + QK++A+  AAR AL+ L K  +T  
Sbjct: 1724 QQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVL-KEKETAT 1783

Query: 251  GMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKIGTTS 310
                  DG  +       +Q L+D C +++W  P Y    + GP+H KRFV SV++ T+ 
Sbjct: 1784 KKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVNTSD 1843

Query: 311  D--TTLCITGDEKSRVRDAENSAASLMIRAL 334
               T  CI G+    V+ A++SAA L++  L
Sbjct: 1844 RGWTDECI-GEPMPSVKKAKDSAAVLLLELL 1870

[Close]

BLAST of Sed0023956 vs. ExPASy TrEMBL
Match: A0A6J1HKS4 (ribonuclease 3-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465061 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 7.6e-149
Identity = 277/339 (81.71%), Postives = 300/339 (88.50%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           ME+SVLA E IVSYNFKNKKLLEEALTHSSY ESASY+RLEFIGD AI LA +NYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           PDL QG+LSL+R+ANISTE LARVAVRHGLYHYVRR A ALDDKVREF DSVALE+ SVP
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSVP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGL+KAPKVLADIVESVAGAIYVDV FDLQRLWVIIRGLLEPIYTP+DL VE QPVT+L
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           FEVCQKNGKQVDIKN   GS+ V+ V+VDG  VASGSS  KEIARLNAAREAL +LSK+M
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGTFVASGSSTHKEIARLNAAREALAKLSKTM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           D NI  AVTIDGIDE+FEIEGAKQKLHDFCCKKKW KPNYS EKD GPSH+KRF CSVKI
Sbjct: 241 DINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
            T+S   L + GDEKSRV+D+ENSAAS+MIRALQE+ YL
Sbjct: 301 STSSG-MLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Sed0023956 vs. ExPASy TrEMBL
Match: A0A6J1F189 (ribonuclease 3-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111438633 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.6e-146
Identity = 273/339 (80.53%), Postives = 297/339 (87.61%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           ME+SVLA E IVSYNFKNKKLLEEALTHSSY ESASY+RLEFIGD AI LA +NYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           PDL QG+LSL+R+ANISTE LARVAVRHGLYHYVRR A ALDDKVREF DSVALE+ S+P
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNSIP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGL+KAPKVLADIVESVAGAIYVDV FDLQRLWVIIRGLLEPIYTP+DL VE QPVT+L
Sbjct: 121 YGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           FEVCQKNGKQVDIKN   GS+ V+ V+VDG  VASGSS  K IARLNAAREAL ++SK+M
Sbjct: 181 FEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKVIARLNAAREALAKMSKTM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           D NI  AVTIDGIDE+FEIEGAKQKLHDFCCKKKW KPNYS EKD GPSH+KRF CSVKI
Sbjct: 241 DINIRAAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
              S   L + GDEKSRV+D+ENSAAS+MIRALQE+ YL
Sbjct: 301 SPPSG-MLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Sed0023956 vs. ExPASy TrEMBL
Match: A0A5D3DKE4 (Ribonuclease 3-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00580 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.6e-141
Identity = 265/339 (78.17%), Postives = 296/339 (87.32%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           M +SV+A ERI+SY FKNKKLLEEALTH SY +SASYERLEFIGD AI LA++NYFFLAY
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           P+L QG+LSL+R+AN+STE LARVAV HGLY+YVRRNAA +D KV+EF DSVALE  SVP
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGL+KAPKVLADIVESVAGA+YVDV FDLQ+LWVIIRGLLEPIYT ++L VE QPVT+L
Sbjct: 121 YGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           F+VCQ+NGKQVDIKN   GS+N+A VYVDG  VASGSSMQKEIARLNAAREALI+LS SM
Sbjct: 181 FDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           DT I   VTI+GIDE+FEIEGAKQKLHDFCC+KKW KP YSIEK LGPSH +RFVCSVKI
Sbjct: 241 DTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
            T    T  I GDEKSRV+DAENSAASLMIRALQER +L
Sbjct: 301 PTCYG-TFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of Sed0023956 vs. ExPASy TrEMBL
Match: A0A1S3BM12 (ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.6e-141
Identity = 265/339 (78.17%), Postives = 296/339 (87.32%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           M +SV+A ERI+SY FKNKKLLEEALTH SY +SASYERLEFIGD AI LA++NYFFLAY
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           P+L QG+LSL+R+AN+STE LARVAV HGLY+YVRRNAA +D KV+EF DSVALE  SVP
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGGL+KAPKVLADIVESVAGA+YVDV FDLQ+LWVIIRGLLEPIYT ++L VE QPVT+L
Sbjct: 121 YGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           F+VCQ+NGKQVDIKN   GS+N+A VYVDG  VASGSSMQKEIARLNAAREALI+LS SM
Sbjct: 181 FDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           DT I   VTI+GIDE+FEIEGAKQKLHDFCC+KKW KP YSIEK LGPSH +RFVCSVKI
Sbjct: 241 DTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
            T    T  I GDEKSRV+DAENSAASLMIRALQER +L
Sbjct: 301 PTCYG-TFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of Sed0023956 vs. ExPASy TrEMBL
Match: A0A0A0L1E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.6e-138
Identity = 259/339 (76.40%), Postives = 294/339 (86.73%), Query Frame = 0


Query: 1   MENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAY 60
           ME+SV+A ERI+SYNF NK LLEEALTH SY+ SASYERLEF+GD AI LA++NYFFLA 
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PDLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVP 120
           P L QG LSL+R+AN+STE LARVAV HGLY+YVRR++ A+DDKV+EF DSVALE  SVP
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 121 YGGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLL 180
           YGG++KAPKVLADIVESVAGA+YVDV FDLQ+LWVIIRGLLEPIYT ++L VE QPVT+L
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 181 FEVCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSM 240
           F+VCQ+NGKQVDIK+   GS ++A V+VDGK VASGSSMQKEIARLNAAREALI+LS SM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 241 DTNIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKI 300
           DT I   VTIDGIDE+FEIEGAKQKLHD C K+KW KPNYS+EKDLGPSHE+ FVCSVKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 301 GTTSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
            T    T  I GDEKSRV+DAENSAASLMIRALQER +L
Sbjct: 301 ATCYG-TFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of Sed0023956 vs. TAIR 10
Match: AT3G20420.1 (RNAse THREE-like protein 2 )

HSP 1 Score: 355.5 bits (911), Expect = 4.6e-98
Identity = 187/337 (55.49%), Postives = 254/337 (75.37%), Query Frame = 0


Query: 4   SVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAYPDL 63
           S+ A E+I++Y F NK LL+EA+TH+S T+  SYERLEFIGD AI LAISNY +L YP L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  DQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDK-SVPYG 123
           +   LSL+R+AN+STE LARV++ HGLY ++RRNA +LD+KV+EF+++V  ED  SV YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 GLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLFE 183
           GLVKAPKVLAD+ ES+AGA+YVDV FDLQRLWVI RGLLEPI T DDL  + QPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 VCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSMDT 243
           +C K+ K++DIKN   G+ ++A +Y+D +L+ASG +  K+IARL AA+EAL +LS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFP- 298

Query: 244 NIGMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKIGT 303
            + M +  D ++   ++  AK KL++ C KKKW KP YS+E+D      KRFVCS KI  
Sbjct: 299 -VEMVIDEDSVE--IQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TSDTTLCITGDEKSRVRDAENSAASLMIRALQERNYL 340
           T + TL + GDE+S+++ AE+S+A  MIRAL++ +YL
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]

BLAST of Sed0023956 vs. TAIR 10
Match: AT5G45150.1 (RNAse THREE-like protein 3 )

HSP 1 Score: 213.0 bits (541), Expect = 3.7e-55
Identity = 141/391 (36.06%), Postives = 208/391 (53.20%), Query Frame = 0


Query: 3   NSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAYPD 62
           NSV A E+I++Y+F NK LL+EA+T     +S  ++RLEF GD  + +A +NY    YP+
Sbjct: 2   NSVEAVEKILNYSFVNKTLLKEAITQ----KSPLFDRLEFFGDSILEVAFTNYICHTYPN 61

Query: 63  LDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVPYG 122
           L    L  +R+AN+S E  AR+AV H L+H++     +L  KV+ FA++V  ED  VPYG
Sbjct: 62  LKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYG 121

Query: 123 GLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQ-PVTLLF 182
           GLVKAPK+LAD +ES+A  +++DV +D++RLW I R LLEPIYTPDDLL++ + P   LF
Sbjct: 122 GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTLF 181

Query: 183 EVCQKNGKQ-----------------------VDIKN------EIIGSE----------- 242
            +  K+G +                       VD+++      EI  +E           
Sbjct: 182 RLADKHGSESTSGIRKMTTSTKILLRNKDCLDVDLEDVKGKSFEICSTELFSLSTVSENS 241

Query: 243 -----------------NVARVYVDGKLVASGSSMQKEIARLNAAREALIELSKSMDTNI 302
                            NV    V GKL     + + +I   ++      E+     T  
Sbjct: 242 LTDEMSQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQIQTGSSGNPLTYEM-----TTK 301

Query: 303 GMAVTIDGIDETFEIEGAKQKLHDFCCKKKWTKPNYSIEKDLGPSHEKRFVCSVKIGTTS 335
            M V  D +    E    + +L + C K KW +P +S++++ GP +E +FVCSVKI   +
Sbjct: 302 QMVVDKDSLH--VEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPN 361

[Close]

BLAST of Sed0023956 vs. TAIR 10
Match: AT1G01040.1 (dicer-like 1 )

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-52
Identity = 130/347 (37.46%), Postives = 190/347 (54.76%), Query Frame = 0


Query: 9    ERIVSYNFKNKKLLEEALTHSSYTES--ASYERLEFIGDVAISLAISNYFFLAYPDLDQG 68
            ER + Y FK K LL EA+TH+S   S  + Y+RLEF+GD  +   I+ + F  Y  L  G
Sbjct: 1563 ERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPG 1622

Query: 69   RLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVPYG---- 128
            RL+ +R+A ++ EN ARVAV+H L+ Y+R  ++AL+ ++REF   V  E     +     
Sbjct: 1623 RLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGL 1682

Query: 129  GLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLFE 188
            G  KAPKVL DIVES+AGAI++D G D    W + + LL+P+ TP+ L     PV  L E
Sbjct: 1683 GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETL--PMHPVRELQE 1742

Query: 189  VCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIEL------ 248
             CQ+  + ++ K    G+     V++DG  V    + QK++A+  AAR AL  L      
Sbjct: 1743 RCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIA 1802

Query: 249  -SKSMDTNIGMAVTIDGIDETFEIEG-----AKQKLHDFCCKKKWTKPNYSIEKDLGPSH 308
             SK    N G A    G +E    +       +Q L+D C +K W  P+Y   K+ GP+H
Sbjct: 1803 ESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAH 1862

Query: 309  EKRFVCSVKIGTTSD--TTLCITGDEKSRVRDAENSAASLMIRALQE 336
             KRF   V++ T+    T  CI G+    V+ A++SAA L++  L +
Sbjct: 1863 AKRFTFGVRVNTSDRGWTDECI-GEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]

BLAST of Sed0023956 vs. TAIR 10
Match: AT1G01040.2 (dicer-like 1 )

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-52
Identity = 130/347 (37.46%), Postives = 190/347 (54.76%), Query Frame = 0


Query: 9    ERIVSYNFKNKKLLEEALTHSSYTES--ASYERLEFIGDVAISLAISNYFFLAYPDLDQG 68
            ER + Y FK K LL EA+TH+S   S  + Y+RLEF+GD  +   I+ + F  Y  L  G
Sbjct: 1564 ERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPG 1623

Query: 69   RLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVPYG---- 128
            RL+ +R+A ++ EN ARVAV+H L+ Y+R  ++AL+ ++REF   V  E     +     
Sbjct: 1624 RLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGL 1683

Query: 129  GLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLFE 188
            G  KAPKVL DIVES+AGAI++D G D    W + + LL+P+ TP+ L     PV  L E
Sbjct: 1684 GDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETL--PMHPVRELQE 1743

Query: 189  VCQKNGKQVDIKNEIIGSENVARVYVDGKLVASGSSMQKEIARLNAAREALIEL------ 248
             CQ+  + ++ K    G+     V++DG  V    + QK++A+  AAR AL  L      
Sbjct: 1744 RCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIA 1803

Query: 249  -SKSMDTNIGMAVTIDGIDETFEIEG-----AKQKLHDFCCKKKWTKPNYSIEKDLGPSH 308
             SK    N G A    G +E    +       +Q L+D C +K W  P+Y   K+ GP+H
Sbjct: 1804 ESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAH 1863

Query: 309  EKRFVCSVKIGTTSD--TTLCITGDEKSRVRDAENSAASLMIRALQE 336
             KRF   V++ T+    T  CI G+    V+ A++SAA L++  L +
Sbjct: 1864 AKRFTFGVRVNTSDRGWTDECI-GEPMPSVKKAKDSAAVLLLELLNK 1907

[Close]

BLAST of Sed0023956 vs. TAIR 10
Match: AT3G43920.1 (dicer-like 3 )

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-35
Identity = 110/381 (28.87%), Postives = 183/381 (48.03%), Query Frame = 0


Query: 2    ENSVLAAERIVSYNFKNKKLLEEALTHSSYTESASYERLEFIGDVAISLAISNYFFLAYP 61
            E+ ++  ER + + F  K LL+EA+THSS  ES SYERLEF+GD  +   I+ + F  Y 
Sbjct: 1146 EDELIELERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYE 1205

Query: 62   DLDQGRLSLIRSANISTENLARVAVRHGLYHYVRRNAAALDDKVREFADSVALEDKSVPY 121
                G ++ +RSA ++ EN A+VAV++ L+ +++R A  L+ ++ ++  S    D++   
Sbjct: 1206 QTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRS 1265

Query: 122  GGLVKAPKVLADIVESVAGAIYVDVGFDLQRLWVIIRGLLEPIYTPDDLLVEAQPVTLLF 181
               ++ PK L D+VES+AGA+ +D   DL ++W +   LL P+ TPD L  +  P   L 
Sbjct: 1266 IPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKL--QLPPYRELN 1325

Query: 182  EVCQKNGK--QVDIKNEIIGSENVARVYVDGKLV-ASGSSMQKEIARLNAAREALIELSK 241
            E+C   G   +V   N+ + ++   ++ +D  L+   GS    ++A   AA   L +L K
Sbjct: 1326 ELCDSLGYFFRVKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLEK 1385

Query: 242  --------------SMDTNIGM--AVTIDGIDETFEIE---------------GAKQKLH 301
                          SMD N+    +       ET EI+               G +  LH
Sbjct: 1386 RNISRKTSLGDNQSSMDVNLACNHSDRETLTSETTEIQSIVIPFIGPINMKKGGPRGTLH 1445

Query: 302  DFCCKKKWTKPNY--SIEKDLGP-----SHEKR-----FVCSVKIGTTSDTTLCITGDEK 337
            +FC K  W  P +  S EK   P       EKR     F  ++ +   +   +   G+ +
Sbjct: 1446 EFCKKHLWPMPTFDTSEEKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYAGEAR 1505

The following BLAST results are available for this feature:

BLAST of Sed0023956 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965096.1	1.6e-148	81.71	ribonuclease 3-like protein 2 [Cucurbita maxima]	[more]
XP_023551903.1	2.7e-148	81.71	ribonuclease 3-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
KAG6577457.1	1.3e-147	81.42	Ribonuclease 3-like protein 2, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_038903239.1	2.3e-147	82.60	ribonuclease 3-like protein 2 [Benincasa hispida]	[more]
XP_022932283.1	3.3e-146	80.53	ribonuclease 3-like protein 2 [Cucurbita moschata]	[more]

BLAST of Sed0023956 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTQ0	6.5e-97	55.49	Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1	[more]
Q6ATG6	2.3e-62	49.64	Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0...	[more]
Q9FKF0	5.2e-54	36.06	Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1	[more]
Q9SP32	1.9e-51	37.46	Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV...	[more]
Q8LMR2	2.7e-50	37.46	Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL...	[more]

BLAST of Sed0023956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKS4	7.6e-149	81.71	ribonuclease 3-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465061 PE=4 S...	[more]
A0A6J1F189	1.6e-146	80.53	ribonuclease 3-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111438633 PE=4...	[more]
A0A5D3DKE4	2.6e-141	78.17	Ribonuclease 3-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BM12	2.6e-141	78.17	ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1	[more]
A0A0A0L1E2	1.6e-138	76.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1	[more]

BLAST of Sed0023956 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20420.1	4.6e-98	55.49	RNAse THREE-like protein 2	[more]
AT5G45150.1	3.7e-55	36.06	RNAse THREE-like protein 3	[more]
AT1G01040.1	1.3e-52	37.46	dicer-like 1	[more]
AT1G01040.2	1.3e-52	37.46	dicer-like 1	[more]
AT3G43920.1	7.3e-35	28.87	dicer-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000999	Ribonuclease III domain	SMART	SM00535	riboneu5	coord: 20..119 e-value: 9.1E-17 score: 71.7
IPR000999	Ribonuclease III domain	PFAM	PF00636	Ribonuclease_3	coord: 38..104 e-value: 2.6E-15 score: 56.9
IPR000999	Ribonuclease III domain	PROSITE	PS50142	RNASE_3_2	coord: 5..149 score: 26.112116
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 20..103 e-value: 3.66264E-26 score: 98.0686
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 125..186 e-value: 0.044 score: 18.0 coord: 211..283 e-value: 1.5E-7 score: 41.1
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 125..184 e-value: 6.8E-6 score: 26.7 coord: 211..282 e-value: 3.4E-13 score: 50.1
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 210..284 score: 12.81505
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 124..187 score: 9.294987
None	No IPR available	GENE3D	3.30.160.20		coord: 121..194 e-value: 1.0E-8 score: 37.0
None	No IPR available	GENE3D	3.30.160.20		coord: 208..285 e-value: 5.4E-18 score: 67.0
None	No IPR available	PANTHER	PTHR14950	DICER-RELATED	coord: 7..105 coord: 104..279
None	No IPR available	PANTHER	PTHR14950:SF49	RIBONUCLEASE 3-LIKE PROTEIN 2-RELATED	coord: 7..105 coord: 104..279
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 210..286
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 125..187
IPR036389	Ribonuclease III, endonuclease domain superfamily	GENE3D	1.10.1520.10	Ribonuclease III domain	coord: 5..114 e-value: 1.9E-30 score: 107.5
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 3..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023956.1	Sed0023956.1	mRNA
Sed0023956.2	Sed0023956.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030422	production of siRNA involved in RNA interference
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006396	RNA processing
biological_process	GO:0016075	rRNA catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005622	intracellular anatomical structure
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding