Sed0023953 (gene) Chayote v1

Overview


Name	Sed0023953
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Photosystem II stability/assembly factor
Location	LG07: 4586235 .. 4592753 (-)
RNA-Seq Expression	Sed0023953
Synteny	Sed0023953

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGGATAATGTGAGAGATAAGAGGGCAAATTTGCTTCAGCTCTCATCAATGGCGACTCTGCAACAACTCCTCAAACCTTCATGCTCCTCTCTCTTTCCTCCTTCGTCTCCTCGCCATTCCCTTTCCCAGCCTCGAACTCTCAATGCCACCACTCCCAAAGCGTCTCTTCAGAACTCTTCCATCAATCGCCGCCGGTTTGTTGCCGACACGGCAGCCGCCGTTTCTCTGTCGATTTCCCCCTTCATTGGCCCCGTGCTGACGGCGAAGTCCGAATCGAGTCTGTCCGAGTGGGAGAGACTGTACCTTCCTATCGATCCCGGTGTTGTTCTCCTCGACATTGCTTTTGTGCCTGATGATTTGGACCGTGGTTAGTTTCGATTGCTTTTTGTTCCTTTTTCTGCAGAAATGTACGAGTAATGCTGAAGGATTTAGGATTTGTTTTGTTTTTCTGCTACGGATTTTGACGTTTTTGGAAACCCACTTGTCAGTTTTCATGGATTCTTAGGCTTACCAGTTGAATGTTATATTGTCTTCTTTTATGGCTTGAATTGTGTTCTAACTAAGTTAAGTTGGTCTTCATTTCCTGTTATTTTAATACGAGTTAGAAGTGTACATGGCCCGAATTGAGTTCAATTGGAGGAATATTTTGGACCAACCCAAATCAACCCATCCAACCCTATATATTATAGCAATCCAACTCAATATTTTCAAGTTGGATTGGGTTTGTGTCAATCTCCATTTTCATCTCTAATCCAATTTATAGCTAGTAAATATGTAAATAAATAAATAAATAAAATAAATGATACTGTGCTTAAACTTAGATTAACAATCTTATAAGTGCATATATCTTCCCTAAACAACTCCCTTATTAATTTAACTTACACAACCACACACATATTTAATACAATGTCATGGTTAGTTCGGGTTGGGTTGTATTGAACGAGCCAAGATTCGGCCAACCAACGTAAACTTCAAAATTATAACCCAACCCAACTCTCAGTGTTGAGAATCCCACATTGATAAGGAGAGAATATGTCTAAGTGTTTAAAAGGTAGATGGACTACTCCTCTCATTATCAATTGGTTTTGAAATGGATGTCCACACTATTTCACACTCAGGGGTTGGGTTGGATGGTTCTGGTTGTTCAGATTATTAGTTTTTTTTGTACCTCTAATATCAGTGTCTGCACTATAATTTCTCTGGGAGTAGAGAGTTGGGGCTTTTCTGTGTTGTGAAATCGTGGAAAGCAATTTCTGATTATCATTTCTTGAAATGATCTTATCTATACCTTCTTGGTGTTTGTGAATTTTGTCATGGCTCCAGACTATTGTAATTTGTGATTTCTGGTTTTACGGTTATTGTTTCGGGTTTCTTCGACAACTATAATGCCATGAAATCGTTTGACACTTTCAGCCCACTGCAGGCTTCCTTTTGGGGACCAGGCAAACCATTTTAGAGACTAAAGATGGTGGAAGAACTTGGGCTCCACGTTCAATACCCTCAGCTGAAGAAGAAGACTTTAACTACCGATTTAATGCTATTAGCTTCAAAGGAAAGGAGGGATGGATTATTGGAAAACCTGCAATTCTTTTGTACACTTCGGATGGTGGGGAGAGCTGGGAAAGGATCCCTCTTAGTGCTCAGCTTCCTGGTGATATGGTAAAGTAGAATTTTATACCATGATATGGAACTGTGATAGGACCCAAACAAGAACCTGAACTCTATTATTGTATCGAATTCGAAATAACAGAATTACAAGATAAACTAAATTTTGATAGGAACTTGGAACCGCCCTCACACTTGAGAATACTCTCTCAAGCCTAATATCAAAATGGCCAAAATACTTGATATCTCTTCTATACCTATTCCCCTCTATTTATAACCAAATTTGTAACAAACTCCCTTAGGTATTTACTAAAATATCCCTAAACTATCCCAACCCTGTCAAACTGTCATATATGATAGTAATTGAATTTTTTGTTATATTTTTAGATTATCCTCATTAGTTTTAGCATTTTCTTTATTAATTGTAGTTATCATGCTCATTTAATAGCTATTAGCTAAATAAGGTAAGACCATTAGAACATAGCAACTCAAGTTCACTCATTTATAAATTAAGATGGAAATTTTGGTTTTTGCAACATACATATCTATAGCTATAAATTTATCTGCTATTTTCTGCTTGAATGTGCTTATATTTAACTTTAGAGTGGGTTATTCTACTACAAAACCTTCAGGTTTACATACAAGCAACTGGAGAAAAAAGTGCCGAGATGGTTACTGACGAAGGTGCAATATATGTTACATCAAACAAGGGCTATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGGTGAGCTTCATTATGGGGGAAATTTTTTATTCGAAGGGTTTAAACTAAAACACTCAGTGTCAAAAGAAGCAGCAGAGCTTTATTGACATCTAATACGACCTAGTGACTAAGAGATTACGGGTTTGAAACCCCCCATCCTCAAATGTTGTTGAACCCAAAGAAAAGAAACTTATTGTTCAGAACTTAACCTTGAAATCAATGTGGAATAATTGGGCTGCTAACTGATAAGATTTGAATGGCAGCTTGAGGTAGGAAATCATTGGCCACAGTTCATTAGTTAAGCTGATTAAAAGAAAACATTCAATCCTGATTACGAGATGCTAATGTGGTTACCTTACATTTTTCAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTACACTGGAACCTTTAACACAGTAAATCGCTCCCCTGATGGGCGTTATGTGGCCGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGGTTTAACTTCTATATTTATTTTACTCTCTTTCTCTTCTTCTAACTGTATTGCTTTGAACTGATTTTTGAAGAATTTTGTTCCTATACAAAACTTTGAGAACTACATTTGTAAGCCATTAAAACTTGGCTTCATTTGCAATGCCAGCCATACTGGCAGCCACATAATAGAGCTATTGCAAGGAGGATTCAGAACATGGGGTGGAGAAATGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTTTTAGTAAAGGGACAGGGGTAAGTGAAATTGAGGACCATTCCTTTGTGTTTTTTTCTAGTCAAGCCATCATAATCCCTTTGAAAACAGAGTGACATGTAAATTATAGATTTTCATTCTATTGGTTATATCTTTGATGTTGCTTCCCAGAATTGCAGCTAGACCTTTCAGCCAACTCCTGTTAAATTAATTGCTTGTTGTGTTCAATGTATTTAATATGACAGATAAATGAGGATTTTGAAGAAGTTCCAGTTCAAAGCCGAGGTTTTGGCATATTAGATGTCGGTTATCGTTCAAAAGTAAGTTTATAAAATCATTTAAATGGCTATACTTTTGTGCATCCTCATTCATTCTTGAATTCCCATGCTGATTTTGTGAATCGTGATTAAGACGGGAATATCATATTTGTTTGTTGTTAATAGCTATTATTGACCTTTGATGATGTACTCTATGGATCTGGTTGATGTGTGGCAGATTACATAAAGGAATGGCCAGACAGAAGCCTCAATATAATAATTTAGTTTTTTTCTTGTTTTGTTATAAAAATGTCAATCAACAATCAATCGAAAATAATAGAAGAATGTGAGAGAGAACTCACAAAAATTTACGTAATTCACTAACAGTGTGTTAGCTACATCCATAGGCAGAGTAGAGAGTTTTATTAAGGACAATAACGATTACACAATGTTGACCAAATGGAACTAGAGTTTTCATAAAGTTTATATAGTGCACTCTAATAAAACTCTATTACAGATAAGACCAAATTACATAAAAGTCCATATACGAAAAAAAAAATTTAATTACATATTTCTCTGATCGGGCAGCGAAACCTCCGACTAATTAATCGTGGGGCATCAAACAGTTCAAGCATATCTCATCATTTTTATTAGACAAGCTTTTCTAACTAGTTAAGGGGGTTGGACTATACTTGGTAAAGCTAGTTTGCGCTTGAACTGTTTATTCTTATGTCCAAGGTAGCATGTATAAATGTGAGCAAAAAAGAGATTTAATTTTTTTTTGAAGGATTAGATTGCATGAAATAGCTGGAAAAACCTCTGGGGTTGTAAGTGGGAAAAAATGAACTATTTTTTCAGTCATTTGAATTAGCTCGATACATATTTATGAGATTAGGTGTGGTTATGTTCTACATCTTCTCTGGAGTAGTTAGGTTTCTCATTTGATCACACATCTTCCTGCAATTGTTAACACGATGAAGGATGCTACTATCATAGAAGTTTTATTATCTCATGATCATAATAAATAATTGCATTGTCCAAGTTATCTTAAGCTTGAAGCTCAAATTAGTGCATACCTCCAGAGAAGATGAAGATCTATATCCTTAGCATAATACATTGTGCAAAACTGCAAATTGTTGTACGTAGTTGTGTGCTGAATTTGAAGAGAGCCATATCCTTTGAATTTACTATAGTACCAGACAAAGATAAAGTCATCCCTTAATCCAAATTGATCATGGCCTTGATGGATTTATTTTATTGAAAAAATATCTGGTCTGAGTCTTACAGGAAGAGGCCTGGGCAGCTGGGGGAAGTGGAGTACTTCTAAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTGAGTATGATCATACTGATTTAGTTTTACAAATTTTGAAACCTGAAATTATCTCGTACTTGACGACAATTTGGCATAGACTATCCCTTTAGAAACTCTCCCTCGGATGAATAAAGTGTAAGAAGAAGAATCAAATCTCTATGCCTTGCTTCTTTAGGGTGAATTTGGGATGAATTTTGGAAGGTGAAAAAAAAAGTTTAAAATCTATTTTTCAGAAGTTTTTTCGGTGTTTAGTTATATAAATTGAAAATGATTTTAAAAAACACTTCTAAGTGTTTTTAAGCATTTATAAAAGGAGTGCCTTCATAGATTTTGTTCTTCTTCAAATGTCATAATCAATATGCAAACACAGCGAAAATAATTGTGTTGAAGAAATGGAGGGGATTGAGCTTTGCATTGAGATTGAGTTCTTGACTTTCAAGGGTCATGAGTCGGCCTAGTGGCCAAAGAGAGATTTGGGGATTCAAGAGGTTATAGGTTCACTCCATGGTATATTCAATGAGAATAATTAAGGTGTATGCAAGCTGGCTTGAATATTCATGGATATATAATATATATATGAAATATTCGGCTTTCAATTCACATTCAATATTATCTTTTAATCTATTTACATCTCCGCAGGTTTATAAACGATAAGAAAGGTTTTGTGCTCGGAAATGATGGTGTGTTGCTTCAATATCTTGGTTGAAGTTTGAGGTCTGACTCGGTAATTAATTCATCACCCTTTTTTTTTCATTCTCTTCGAATTTTCTTTGCATAGCCTCTTAGGCAAGTCTGTCACCGTTACTTTCTTCTGCTTGGAAAAAAGATAATGAATTATTGACTACAATCAAACTTGAAGCAATTTAAACGTTTTGGTTTAAATTGTTTAGGCCCCCTTAAAACTATGTTCTCTGATTTTGAAAATTTTGCCTATTTGTATCTTTTCTTGATGTACGTTCGAAATTGTTTTTAAATTCTATCCAGATTTTAAAAGCTGAAAAGGGTATTTAAAAACGTTTGTCTTTGTTTCTGAAATTTTGTTAAACTTTAAAAATGTTACATTAAGGCTTTTTATACATATAAAAAGAAACTTTATTTAAAAAAAAAGTAGTACACATAATACTGAAATCAGAGGTGTAGATATACATTTTTTGCCTGGTTAAATGAGGGAGTTTATGCTTATTGGTGTTCTTGAAGAGCAATTGTTTGAGATCAAATAAGGCCTTAATGGAGTACTTATAGATTATGGGTTCAAACTCTTATGATAAAAATTTATTTTTTATGAATTATCTTGATAATTAAATGTACTGCTTTGATTATAGTTTGAGGATTACAAATTCTTTTTGGGCATGAAAATCAAGATTTATGTATACTACTTGACTGTGTTGTAGAATTGTTGTAACATTTGTTTTGACTTCTTATTGCTATATCAAAAGGATCTAAACGTTAAAGATTTAGCTTTTAACACATTTCTTATTCAGGTCATAGAAATCAGATTCTATATTATGATGCAGCTTGCAATGGAAATTTTGTACCATTAAATCATAGGTTGTATTCTTGCTTTTGATGATGGGATGAGTTGTTGTTACCAAGTTTCATATCTTAAAAAATAAAGAAAAAAAGATTAGACCTGAAGAATGAAAACTTGTAACTATGCTTTCATTTGAAAGAATAGACGTTGTAAATAGTTTTTTAATTTTTTTTTTGTTCATATATGCAATCTAAACGTATACTTGTTCCGATGGCCATTGTTGAACGCAAACAATGATGAATTTAATGTTATAGATGCATTTTTATATCC

mRNA sequence

TGTGGATAATGTGAGAGATAAGAGGGCAAATTTGCTTCAGCTCTCATCAATGGCGACTCTGCAACAACTCCTCAAACCTTCATGCTCCTCTCTCTTTCCTCCTTCGTCTCCTCGCCATTCCCTTTCCCAGCCTCGAACTCTCAATGCCACCACTCCCAAAGCGTCTCTTCAGAACTCTTCCATCAATCGCCGCCGGTTTGTTGCCGACACGGCAGCCGCCGTTTCTCTGTCGATTTCCCCCTTCATTGGCCCCGTGCTGACGGCGAAGTCCGAATCGAGTCTGTCCGAGTGGGAGAGACTGTACCTTCCTATCGATCCCGGTGTTGTTCTCCTCGACATTGCTTTTGTGCCTGATGATTTGGACCGTGGCTTCCTTTTGGGGACCAGGCAAACCATTTTAGAGACTAAAGATGGTGGAAGAACTTGGGCTCCACGTTCAATACCCTCAGCTGAAGAAGAAGACTTTAACTACCGATTTAATGCTATTAGCTTCAAAGGAAAGGAGGGATGGATTATTGGAAAACCTGCAATTCTTTTGTACACTTCGGATGGTGGGGAGAGCTGGGAAAGGATCCCTCTTAGTGCTCAGCTTCCTGGTGATATGGTTTACATACAAGCAACTGGAGAAAAAAGTGCCGAGATGGTTACTGACGAAGGTGCAATATATGTTACATCAAACAAGGGCTATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTACACTGGAACCTTTAACACAGTAAATCGCTCCCCTGATGGGCGTTATGTGGCCGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGCCATACTGGCAGCCACATAATAGAGCTATTGCAAGGAGGATTCAGAACATGGGGTGGAGAAATGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTTTTAGTAAAGGGACAGGGATAAATGAGGATTTTGAAGAAGTTCCAGTTCAAAGCCGAGGTTTTGGCATATTAGATGTCGGTTATCGTTCAAAAGAAGAGGCCTGGGCAGCTGGGGGAAGTGGAGTACTTCTAAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTTTATAAACGATAAGAAAGGTTTTGTGCTCGGAAATGATGGTGTGTTGCTTCAATATCTTGGTTGAAGTTTGAGGTCTGACTCGGTCATAGAAATCAGATTCTATATTATGATGCAGCTTGCAATGGAAATTTTGTACCATTAAATCATAGGTTGTATTCTTGCTTTTGATGATGGGATGAGTTGTTGTTACCAAGTTTCATATCTTAAAAAATAAAGAAAAAAAGATTAGACCTGAAGAATGAAAACTTGTAACTATGCTTTCATTTGAAAGAATAGACGTTGTAAATAGTTTTTTAATTTTTTTTTTGTTCATATATGCAATCTAAACGTATACTTGTTCCGATGGCCATTGTTGAACGCAAACAATGATGAATTTAATGTTATAGATGCATTTTTATATCC

Coding sequence (CDS)

ATGGCGACTCTGCAACAACTCCTCAAACCTTCATGCTCCTCTCTCTTTCCTCCTTCGTCTCCTCGCCATTCCCTTTCCCAGCCTCGAACTCTCAATGCCACCACTCCCAAAGCGTCTCTTCAGAACTCTTCCATCAATCGCCGCCGGTTTGTTGCCGACACGGCAGCCGCCGTTTCTCTGTCGATTTCCCCCTTCATTGGCCCCGTGCTGACGGCGAAGTCCGAATCGAGTCTGTCCGAGTGGGAGAGACTGTACCTTCCTATCGATCCCGGTGTTGTTCTCCTCGACATTGCTTTTGTGCCTGATGATTTGGACCGTGGCTTCCTTTTGGGGACCAGGCAAACCATTTTAGAGACTAAAGATGGTGGAAGAACTTGGGCTCCACGTTCAATACCCTCAGCTGAAGAAGAAGACTTTAACTACCGATTTAATGCTATTAGCTTCAAAGGAAAGGAGGGATGGATTATTGGAAAACCTGCAATTCTTTTGTACACTTCGGATGGTGGGGAGAGCTGGGAAAGGATCCCTCTTAGTGCTCAGCTTCCTGGTGATATGGTTTACATACAAGCAACTGGAGAAAAAAGTGCCGAGATGGTTACTGACGAAGGTGCAATATATGTTACATCAAACAAGGGCTATAATTGGAAGGCTGCAGTTCAGGAGACTGTTTCTGCCACTCTTAATAGAACAGTTTCTAGTGGTATAAGTGGTGCAAGCTATTACACTGGAACCTTTAACACAGTAAATCGCTCCCCTGATGGGCGTTATGTGGCCGTTTCAAGTCGTGGTAACTTCTACCTCACCTGGGAGCCTGGGCAGCCATACTGGCAGCCACATAATAGAGCTATTGCAAGGAGGATTCAGAACATGGGGTGGAGAAATGATGGTGGTCTTTGGCTTCTTGTTCGTGGAGGAGGACTTTTTTTTAGTAAAGGGACAGGGATAAATGAGGATTTTGAAGAAGTTCCAGTTCAAAGCCGAGGTTTTGGCATATTAGATGTCGGTTATCGTTCAAAAGAAGAGGCCTGGGCAGCTGGGGGAAGTGGAGTACTTCTAAAAACTACAAATGGTGGCAAGACATGGACCCGTGATAAAGCAGCTGACAATATTGCGGCCAACCTATACTCTGTAAAGTTTATAAACGATAAGAAAGGTTTTGTGCTCGGAAATGATGGTGTGTTGCTTCAATATCTTGGTTGA

Protein sequence

MATLQQLLKPSCSSLFPPSSPRHSLSQPRTLNATTPKASLQNSSINRRRFVADTAAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWERIPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRNDGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG

Homology

[Close]

BLAST of Sed0023953 vs. NCBI nr
Match: KAA0058574.1 (photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa] >TYK10374.1 photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa])

HSP 1 Score: 738.0 bits (1904), Expect = 4.2e-209
Identity = 371/405 (91.60%), Postives = 386/405 (95.31%), Query Frame = 0


Query: 1   MATL-QQLLKPS-CSSLFPPSSPRHSLSQ----PRTLNATTPKASLQNSSINRRRFVADT 60
           MATL QQLLKPS  SSLF  SSPRHSLSQ    PRT+++T+PKASL NSSINRR+FVADT
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLLPRTISSTSPKASLHNSSINRRQFVADT 60

Query: 61  AAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQ 120
           AAAVSLS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDDL+ GFLLGTRQ
Sbjct: 61  AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWER 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWI+GKPAILLYTSD GESWER
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRN 300
           ISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR 
Sbjct: 241 ISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TNGG++WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of Sed0023953 vs. NCBI nr
Match: XP_022991485.1 (photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 738.0 bits (1904), Expect = 4.2e-209
Identity = 370/400 (92.50%), Postives = 382/400 (95.50%), Query Frame = 0


Query: 1   MATLQQLLKPS-CSSLFPPSSPRHSLSQPRTLNATTPKASLQNSSINRRRFVADTAAAVS 60
           MATLQQLLKPS  SSLF  SSPRHSLS      +TTPKASLQNSSINRR+FVA+TAA VS
Sbjct: 1   MATLQQLLKPSWSSSLFASSSPRHSLS------STTPKASLQNSSINRRQFVAETAATVS 60

Query: 61  LSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET 120
           LS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET
Sbjct: 61  LSLSPFITPVPPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET 120

Query: 121 KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWERIPLSA 180
           KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWI+GKPAILLYTSD GESWERIPLSA
Sbjct: 121 KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWERIPLSA 180

Query: 181 QLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS 240
           QLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS
Sbjct: 181 QLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS 240

Query: 241 YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRNDGGLW 300
           YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR DGGLW
Sbjct: 241 YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLW 300

Query: 301 LLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGK 360
           LLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVG+RS+EEAWAAGGSGVLLKTTNGG+
Sbjct: 301 LLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGFRSQEEAWAAGGSGVLLKTTNGGR 360

Query: 361 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 394

[Close]

BLAST of Sed0023953 vs. NCBI nr
Match: XP_023548135.1 (photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 737.3 bits (1902), Expect = 7.2e-209
Identity = 368/400 (92.00%), Postives = 382/400 (95.50%), Query Frame = 0


Query: 1   MATLQQLLKPS-CSSLFPPSSPRHSLSQPRTLNATTPKASLQNSSINRRRFVADTAAAVS 60
           MATLQQLLKPS  SSLF  SSPRHSLS      +TTPKASLQNSS+NRR+FVA+TAA VS
Sbjct: 1   MATLQQLLKPSWSSSLFASSSPRHSLS------STTPKASLQNSSVNRRQFVAETAATVS 60

Query: 61  LSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET 120
           LS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET
Sbjct: 61  LSLSPFIAPVPPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET 120

Query: 121 KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWERIPLSA 180
           KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWI+GKPAILLYTSD GESWERIPLSA
Sbjct: 121 KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWERIPLSA 180

Query: 181 QLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS 240
           QLPGDMVYI+ATG+KSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS
Sbjct: 181 QLPGDMVYIKATGDKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS 240

Query: 241 YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRNDGGLW 300
           YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR DGGLW
Sbjct: 241 YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLW 300

Query: 301 LLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGK 360
           LLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVG+RS+EEAWAAGGSGVLLKTTNGG+
Sbjct: 301 LLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGFRSQEEAWAAGGSGVLLKTTNGGR 360

Query: 361 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 394

[Close]

BLAST of Sed0023953 vs. NCBI nr
Match: XP_004135957.1 (photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis sativus] >KGN45080.1 hypothetical protein Csa_016138 [Cucumis sativus])

HSP 1 Score: 736.9 bits (1901), Expect = 9.4e-209
Identity = 373/406 (91.87%), Postives = 386/406 (95.07%), Query Frame = 0


Query: 1   MATL-QQLLKPS-CSSLFPPS-SPRHSLSQ----PRTLNATTPKASLQNSSINRRRFVAD 60
           MATL QQLLKPS  SSLF  S SPRHSLSQ    PRTL++TTPKASL NSSINRR FVAD
Sbjct: 1   MATLQQQLLKPSWTSSLFASSTSPRHSLSQPQLLPRTLSSTTPKASLHNSSINRRHFVAD 60

Query: 61  TAAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTR 120
           TAAAVSLS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDD++ GFLLGTR
Sbjct: 61  TAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWE 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWI+GKPAILLYTSD GESWE
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 NDGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK 360
            DGGLWLLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK 360

Query: 361 TTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TTNGG++WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406

[Close]

BLAST of Sed0023953 vs. NCBI nr
Match: XP_008461367.1 (PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis melo])

HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208
Identity = 370/405 (91.36%), Postives = 386/405 (95.31%), Query Frame = 0


Query: 1   MATL-QQLLKPS-CSSLFPPSSPRHSLSQ----PRTLNATTPKASLQNSSINRRRFVADT 60
           MATL QQLLKPS  SSLF  SSPRHSLSQ    PRT+++T+PKASL NSSINRR+FVADT
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLLPRTISSTSPKASLHNSSINRRQFVADT 60

Query: 61  AAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQ 120
           AAAVSLS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDDL+ GFLLGTRQ
Sbjct: 61  AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWER 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWI+GKPAILLYTSD GESWER
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRN 300
           ISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR 
Sbjct: 241 ISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TNGG++WTRDKAADNIAANLYSVKFIN+KKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of Sed0023953 vs. ExPASy Swiss-Prot
Match: O82660 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF136 PE=1 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 1.5e-177
Identity = 311/407 (76.41%), Postives = 352/407 (86.49%), Query Frame = 0


Query: 1   MATLQ-----QLLKPSCSSLFPPSSPRHSLSQPRTLNATTPKASLQNSSIN---RRRFVA 60
           MA+LQ      L KPS S  F      H L  P+  ++  P  S  +SS +    RR + 
Sbjct: 1   MASLQLCDGYLLFKPSVSPRFLSQRISHRLI-PKASSSPPPSPSPSSSSSSLSFSRRELL 60

Query: 61  DTAAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGT 120
             +AAVSLS+S  +GP   A+++  LSEWER++LPIDPGVVLLDIAFVPD+  RGFLLGT
Sbjct: 61  YQSAAVSLSLSSIVGP---ARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGFLLGT 120

Query: 121 RQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESW 180
           RQT+LETKDGG TW PRSIPSAEEEDFNYRFN+ISFKGKEGWIIGKPAILLYT+D GE+W
Sbjct: 121 RQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADAGENW 180

Query: 181 ERIPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVS 240
           +RIPLS+QLPGDMV+I+AT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLNRTVS
Sbjct: 181 DRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVS 240

Query: 241 SGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGW 300
           SGISGASYYTGTF+ VNRSPDGRYVAVSSRGNF+LTWEPGQPYWQPHNRA+ARRIQNMGW
Sbjct: 241 SGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQNMGW 300

Query: 301 RNDGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLL 360
           R DGGLWLLVRGGGL+ SKGTGI E+FEEVPVQSRGFGILDVGYRS+EEAWAAGGSG+LL
Sbjct: 301 RADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGSGILL 360

Query: 361 KTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           +T NGGK+W RDKAADNIAANLY+VKF++DKKGFVLGNDGVLL+Y+G
Sbjct: 361 RTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403

[Close]

BLAST of Sed0023953 vs. ExPASy Swiss-Prot
Match: Q5Z5A8 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HCF136 PE=3 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 4.6e-174
Identity = 305/400 (76.25%), Postives = 333/400 (83.25%), Query Frame = 0


Query: 26  SQPRTLNATTPKASLQNSSINRRRFVADTA-AAVSLSISPFI---GPVLTAKSESSLSEW 85
           S  R      P+A   + S  RRRF+ADTA A+ + ++ P +    P+  A    SLSEW
Sbjct: 17  SSRRRCRLLVPRAHTDSISTGRRRFIADTATASAAAAVGPLVLPRTPLARADQPPSLSEW 76

Query: 86  ERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNY 145
           ER+ LPIDPGVVLLDIAFVPDD   GFLLGTRQTILETK+GG TW PRSIPSAE+EDFNY
Sbjct: 77  ERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNTWFPRSIPSAEDEDFNY 136

Query: 146 RFNAISFKGKEGWIIGKPAILLYTSDGGESWERIPLSAQLPGDMVYIQATGEKSAEMVTD 205
           RFN++SF GKEGWIIGKPAILL+TSD G+SWERIPLSAQLPG+MVYI+ATGE+SAEMVTD
Sbjct: 137 RFNSVSFMGKEGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNMVYIKATGEQSAEMVTD 196

Query: 206 EGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSS 265
           EGAIYVTSN+GYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSS
Sbjct: 197 EGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSS 256

Query: 266 RGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRNDGGLWLLVRGGGLFFSKGTG------- 325
           RGNFYLTWEPGQP+WQPHNRA+ARRIQNMGWR DGGLWLLVRGGGLF SKG+G       
Sbjct: 257 RGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGSGFQFFYRG 316

Query: 326 ---------------INEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGK 385
                          I EDFEE  VQSRGFGILDVGYRSK+EAWAAGGSGVLLKTTNGGK
Sbjct: 317 LNDAHAISYLHPPNQITEDFEEASVQSRGFGILDVGYRSKDEAWAAGGSGVLLKTTNGGK 376

Query: 386 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TW RDKAADNIAANLYSVKF+ D KG+VLGNDGVLL+Y+G
Sbjct: 377 TWVRDKAADNIAANLYSVKFLGDNKGYVLGNDGVLLRYVG 416

[Close]

BLAST of Sed0023953 vs. ExPASy Swiss-Prot
Match: Q9AW48 (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia theta OX=55529 GN=hcf136 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.8e-93
Identity = 164/362 (45.30%), Postives = 243/362 (67.13%), Query Frame = 0


Query: 45  INRRRFVADTAAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDL 104
           INR +F       ++  + P +  +    + ++ + W ++ LP+D   VL DI F   + 
Sbjct: 42  INRTKF-------INYLLYPTLTSLYPKFTHANTTSWTKVDLPVDS--VLFDIEFTDPEC 101

Query: 105 DRGFLLGTRQTILETKDGGRTWAPRSIPSAE-EEDFNYRFNAISFKGKEGWIIGKPAILL 164
             G+L+G++ T LET DGG TW PR+  + + +E+  YRF  ISF+G+EGW+IGKPAI+L
Sbjct: 102 KHGWLVGSKGTFLETDDGGNTWVPRTFANLDPDEELTYRFENISFEGQEGWVIGKPAIIL 161

Query: 165 YTSDGGESWERIPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETV 224
           YT DGG++W R+P+S +LPG+   I+A G +SAE+ T  GAIYVT+N G NWKA V+ET+
Sbjct: 162 YTKDGGKTWFRVPVSPKLPGEPCLIKALGSESAELTTTSGAIYVTNNAGRNWKAQVKETI 221

Query: 225 SATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAI 284
            +TLNRT+SSG+SGASY+TG    V R+ +G+Y+A+SSRGNFYLTWEPGQ +W P  R  
Sbjct: 222 DSTLNRTISSGVSGASYFTGNVINVIRNSEGKYLAISSRGNFYLTWEPGQDFWIPRARET 281

Query: 285 ARRIQNMGW---RNDGGLWLLVRGGGLFFSKGTGINE-----DFEEVPVQSRGFGILDVG 344
           +RRIQ+MG+    N  G+W+  RGGGL  S      E     +FE + +++ G+GILD  
Sbjct: 282 SRRIQSMGFIQNDNQKGIWMSTRGGGLSVSTKNFDFESISSFNFENIDIKTGGYGILDAA 341

Query: 345 YRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLL 398
           + + ++ W   G G++  +T+ GK WT+    D ++ NLY +KF+N+ KGF+LG++G+LL
Sbjct: 342 FVNDKDIWIICGGGIVYNSTDKGKNWTKVDGIDKLSGNLYKIKFVNNNKGFILGSNGLLL 394

[Close]

BLAST of Sed0023953 vs. ExPASy Swiss-Prot
Match: P48325 (Photosystem II stability/assembly factor HCF136 OS=Cyanophora paradoxa OX=2762 GN=hcf136 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.7e-81
Identity = 153/324 (47.22%), Postives = 200/324 (61.73%), Query Frame = 0


Query: 80  EWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDF 139
           +WE+  +P++   +LLDI FVPD   RG+LLGTR T+ ET D G+TW  RS+     ED 
Sbjct: 32  KWEQ--IPLNTDEILLDIGFVPDQPQRGWLLGTRSTLFETTDKGKTWELRSL---NLEDD 91

Query: 140 NYRFNAISFKGKEGWIIGKPAILLYTSDGGESWERIPLSAQLPGDMVYIQATGEKSAEMV 199
            YR N+ISF GKEGW+ GKPAILL+T+DGG SW RIPLS QLPGD   I A G   AE+ 
Sbjct: 92  KYRLNSISFSGKEGWVTGKPAILLHTTDGGSSWSRIPLSNQLPGDPALITALGTGKAELA 151

Query: 200 TDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAV 259
           TD GAIY T N G  WKA +QE +                   G   TV RS +G YVAV
Sbjct: 152 TDIGAIYRTENSGQTWKAQIQEPL-------------------GVIRTVARSENGSYVAV 211

Query: 260 SSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRNDGGLWLLVRGGGLFFSKGTGINEDF 319
           S++GNFY TW+ G   W  H R  +RRIQ+MG+ N+  LW+L RGG L+FS     +E  
Sbjct: 212 SAKGNFYSTWKEGDDKWISHPRQSSRRIQSMGFTNNNRLWMLTRGGQLWFSSNDSFDEPN 271

Query: 320 EEVPVQSR-----GFGILDVGYRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANL 379
            E P         G G+L++ +++  E W +GGSG+LL + + G TW ++ + DNI +N 
Sbjct: 272 WEGPKTPEGKVGFGLGLLNLAFKTPTEIWVSGGSGILLSSQDTGNTWKKETSTDNIPSNF 331

Query: 380 YSVKFINDKKGFVLGNDGVLLQYL 399
           Y + FI+ + GFVLGN G LL+Y+
Sbjct: 332 YKISFIDKEVGFVLGNQGTLLRYV 331

[Close]

BLAST of Sed0023953 vs. ExPASy Swiss-Prot
Match: P73069 (Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr2034 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.7e-81
Identity = 156/322 (48.45%), Postives = 205/322 (63.66%), Query Frame = 0


Query: 77  SLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILETKDGGRTWAPRSIPSAEE 136
           + + W+ + L  D      DIAF  +D + G+L+GT++TI ET DGG TW  + I   EE
Sbjct: 36  AFNPWQEIALETDS--TFADIAFT-EDPNHGWLVGTKETIFETTDGGDTWEQKLIDLGEE 95

Query: 137 EDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWERIPLSAQLPGDMVYIQATGEKSA 196
           +     F+A+SF G EGWI GKP+ILL+T+DGG++W RIPLS +LPG    I A G ++A
Sbjct: 96  K---ASFSAVSFSGNEGWITGKPSILLHTTDGGQTWARIPLSEKLPGAPYSIIALGPQTA 155

Query: 197 EMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRY 256
           EM+TD GAIY T+N G NWKA V+  V                   G   T+ RS DGRY
Sbjct: 156 EMITDLGAIYKTTNGGKNWKALVEGAV-------------------GVARTIQRSTDGRY 215

Query: 257 VAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRNDGGLWLLVRGGGLFFSKGTGIN 316
           VAVS+RGNFY TW PGQ  W PHNR  +RR+Q MG+  DG LWLL RGG L FS      
Sbjct: 216 VAVSARGNFYSTWAPGQTEWTPHNRNSSRRLQTMGYGKDGQLWLLARGGQLQFSTDPDAE 275

Query: 317 EDFEEVPVQSRG-FGILDVGYRSKEEAWAAGGSGVLLKTTNGGKTWTRDKAADNIAANLY 376
           E  + +  Q +G +G+LD+ +R+ EE W AG SG LL + +GG+TW +D   ++I ANLY
Sbjct: 276 EWSDVIAPQDKGSWGLLDLSFRTPEEVWVAGASGNLLMSQDGGQTWAKDTGVEDIPANLY 332

Query: 377 SVKFINDKKGFVLGNDGVLLQY 398
            V F++ +KGFVLG DG+LL+Y
Sbjct: 336 RVVFLSPEKGFVLGQDGILLKY 332

[Close]

BLAST of Sed0023953 vs. ExPASy TrEMBL
Match: A0A5D3CGP8 (Photosystem II stability/assembly factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00160 PE=3 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.0e-209
Identity = 371/405 (91.60%), Postives = 386/405 (95.31%), Query Frame = 0


Query: 1   MATL-QQLLKPS-CSSLFPPSSPRHSLSQ----PRTLNATTPKASLQNSSINRRRFVADT 60
           MATL QQLLKPS  SSLF  SSPRHSLSQ    PRT+++T+PKASL NSSINRR+FVADT
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLLPRTISSTSPKASLHNSSINRRQFVADT 60

Query: 61  AAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQ 120
           AAAVSLS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDDL+ GFLLGTRQ
Sbjct: 61  AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWER 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWI+GKPAILLYTSD GESWER
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRN 300
           ISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR 
Sbjct: 241 ISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TNGG++WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of Sed0023953 vs. ExPASy TrEMBL
Match: A0A6J1JT27 (Photosystem II stability/assembly factor OS=Cucurbita maxima OX=3661 GN=LOC111488086 PE=3 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.0e-209
Identity = 370/400 (92.50%), Postives = 382/400 (95.50%), Query Frame = 0


Query: 1   MATLQQLLKPS-CSSLFPPSSPRHSLSQPRTLNATTPKASLQNSSINRRRFVADTAAAVS 60
           MATLQQLLKPS  SSLF  SSPRHSLS      +TTPKASLQNSSINRR+FVA+TAA VS
Sbjct: 1   MATLQQLLKPSWSSSLFASSSPRHSLS------STTPKASLQNSSINRRQFVAETAATVS 60

Query: 61  LSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET 120
           LS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET
Sbjct: 61  LSLSPFITPVPPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET 120

Query: 121 KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWERIPLSA 180
           KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWI+GKPAILLYTSD GESWERIPLSA
Sbjct: 121 KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWERIPLSA 180

Query: 181 QLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS 240
           QLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS
Sbjct: 181 QLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS 240

Query: 241 YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRNDGGLW 300
           YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR DGGLW
Sbjct: 241 YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLW 300

Query: 301 LLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGK 360
           LLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVG+RS+EEAWAAGGSGVLLKTTNGG+
Sbjct: 301 LLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGFRSQEEAWAAGGSGVLLKTTNGGR 360

Query: 361 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 394

[Close]

BLAST of Sed0023953 vs. ExPASy TrEMBL
Match: A0A0A0K5Y1 (Photosystem II stability/assembly factor OS=Cucumis sativus OX=3659 GN=Csa_7G420730 PE=3 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 4.5e-209
Identity = 373/406 (91.87%), Postives = 386/406 (95.07%), Query Frame = 0


Query: 1   MATL-QQLLKPS-CSSLFPPS-SPRHSLSQ----PRTLNATTPKASLQNSSINRRRFVAD 60
           MATL QQLLKPS  SSLF  S SPRHSLSQ    PRTL++TTPKASL NSSINRR FVAD
Sbjct: 1   MATLQQQLLKPSWTSSLFASSTSPRHSLSQPQLLPRTLSSTTPKASLHNSSINRRHFVAD 60

Query: 61  TAAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTR 120
           TAAAVSLS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDD++ GFLLGTR
Sbjct: 61  TAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDMNHGFLLGTR 120

Query: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWE 180
           QTILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWI+GKPAILLYTSD GESWE
Sbjct: 121 QTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWE 180

Query: 181 RIPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240
           RIPLSAQLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS
Sbjct: 181 RIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSS 240

Query: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWR 300
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR
Sbjct: 241 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWR 300

Query: 301 NDGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK 360
            DGGLWLLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK
Sbjct: 301 ADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLK 360

Query: 361 TTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TTNGG++WTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406

[Close]

BLAST of Sed0023953 vs. ExPASy TrEMBL
Match: A0A1S3CFV0 (Photosystem II stability/assembly factor OS=Cucumis melo OX=3656 GN=LOC103499970 PE=3 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 5.9e-209
Identity = 370/405 (91.36%), Postives = 386/405 (95.31%), Query Frame = 0


Query: 1   MATL-QQLLKPS-CSSLFPPSSPRHSLSQ----PRTLNATTPKASLQNSSINRRRFVADT 60
           MATL QQLLKPS  SSLF  SSPRHSLSQ    PRT+++T+PKASL NSSINRR+FVADT
Sbjct: 1   MATLQQQLLKPSWTSSLFASSSPRHSLSQPQLLPRTISSTSPKASLHNSSINRRQFVADT 60

Query: 61  AAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQ 120
           AAAVSLS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDDL+ GFLLGTRQ
Sbjct: 61  AAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQ 120

Query: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWER 180
           TILETKDGGRTWAPRSIPSAEEEDFNYRFN+ISFKGKEGWI+GKPAILLYTSD GESWER
Sbjct: 121 TILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWER 180

Query: 181 IPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240
           IPLSAQLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG
Sbjct: 181 IPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSG 240

Query: 241 ISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRN 300
           ISGASYYTGTFNTVNRSPDG YVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR 
Sbjct: 241 ISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRA 300

Query: 301 DGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360
           DGGLWLLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT
Sbjct: 301 DGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKT 360

Query: 361 TNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TNGG++WTRDKAADNIAANLYSVKFIN+KKGFVLGNDGVLLQYLG
Sbjct: 361 TNGGRSWTRDKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 405

[Close]

BLAST of Sed0023953 vs. ExPASy TrEMBL
Match: A0A6J1GMA2 (Photosystem II stability/assembly factor OS=Cucurbita moschata OX=3662 GN=LOC111455799 PE=3 SV=1)

HSP 1 Score: 735.3 bits (1897), Expect = 1.3e-208
Identity = 368/400 (92.00%), Postives = 381/400 (95.25%), Query Frame = 0


Query: 1   MATLQQLLKPS-CSSLFPPSSPRHSLSQPRTLNATTPKASLQNSSINRRRFVADTAAAVS 60
           MATLQQLLKPS  SSLF  +SPRHSLS      +TTPKASLQNS INRR+FVA+TAA VS
Sbjct: 1   MATLQQLLKPSWSSSLFASTSPRHSLS------STTPKASLQNSIINRRQFVAETAATVS 60

Query: 61  LSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET 120
           LS+SPFI PV  AKSE SLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET
Sbjct: 61  LSLSPFIAPVPPAKSEESLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGTRQTILET 120

Query: 121 KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESWERIPLSA 180
           KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWI+GKPAILLYTSD GESWERIPLSA
Sbjct: 121 KDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIVGKPAILLYTSDAGESWERIPLSA 180

Query: 181 QLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS 240
           QLPGDMVYI+ATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS
Sbjct: 181 QLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVSSGISGAS 240

Query: 241 YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGWRNDGGLW 300
           YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQP+WQPHNRAIARRIQNMGWR DGGLW
Sbjct: 241 YYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLW 300

Query: 301 LLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGK 360
           LLVRGGGLF SKGTGI+E+FEEVPVQSRGFGILDVG+RS+EEAWAAGGSGVLLKTTNGG+
Sbjct: 301 LLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGFRSQEEAWAAGGSGVLLKTTNGGR 360

Query: 361 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG
Sbjct: 361 TWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 394

[Close]

BLAST of Sed0023953 vs. TAIR 10
Match: AT5G23120.1 (photosystem II stability/assembly factor, chloroplast (HCF136) )

HSP 1 Score: 623.6 bits (1607), Expect = 1.1e-178
Identity = 311/407 (76.41%), Postives = 352/407 (86.49%), Query Frame = 0


Query: 1   MATLQ-----QLLKPSCSSLFPPSSPRHSLSQPRTLNATTPKASLQNSSIN---RRRFVA 60
           MA+LQ      L KPS S  F      H L  P+  ++  P  S  +SS +    RR + 
Sbjct: 1   MASLQLCDGYLLFKPSVSPRFLSQRISHRLI-PKASSSPPPSPSPSSSSSSLSFSRRELL 60

Query: 61  DTAAAVSLSISPFIGPVLTAKSESSLSEWERLYLPIDPGVVLLDIAFVPDDLDRGFLLGT 120
             +AAVSLS+S  +GP   A+++  LSEWER++LPIDPGVVLLDIAFVPD+  RGFLLGT
Sbjct: 61  YQSAAVSLSLSSIVGP---ARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGFLLGT 120

Query: 121 RQTILETKDGGRTWAPRSIPSAEEEDFNYRFNAISFKGKEGWIIGKPAILLYTSDGGESW 180
           RQT+LETKDGG TW PRSIPSAEEEDFNYRFN+ISFKGKEGWIIGKPAILLYT+D GE+W
Sbjct: 121 RQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADAGENW 180

Query: 181 ERIPLSAQLPGDMVYIQATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQETVSATLNRTVS 240
           +RIPLS+QLPGDMV+I+AT +KSAEMVTDEGAIYVTSN+GYNWKAA+QETVSATLNRTVS
Sbjct: 181 DRIPLSSQLPGDMVFIKATEDKSAEMVTDEGAIYVTSNRGYNWKAAIQETVSATLNRTVS 240

Query: 241 SGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPYWQPHNRAIARRIQNMGW 300
           SGISGASYYTGTF+ VNRSPDGRYVAVSSRGNF+LTWEPGQPYWQPHNRA+ARRIQNMGW
Sbjct: 241 SGISGASYYTGTFSAVNRSPDGRYVAVSSRGNFFLTWEPGQPYWQPHNRAVARRIQNMGW 300

Query: 301 RNDGGLWLLVRGGGLFFSKGTGINEDFEEVPVQSRGFGILDVGYRSKEEAWAAGGSGVLL 360
           R DGGLWLLVRGGGL+ SKGTGI E+FEEVPVQSRGFGILDVGYRS+EEAWAAGGSG+LL
Sbjct: 301 RADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGSGILL 360

Query: 361 KTTNGGKTWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 400
           +T NGGK+W RDKAADNIAANLY+VKF++DKKGFVLGNDGVLL+Y+G
Sbjct: 361 RTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVLLRYVG 403

The following BLAST results are available for this feature:

BLAST of Sed0023953 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058574.1	4.2e-209	91.60	photosystem II stability/assembly factor HCF136 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_022991485.1	4.2e-209	92.50	photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita m...	[more]
XP_023548135.1	7.2e-209	92.00	photosystem II stability/assembly factor HCF136, chloroplastic-like [Cucurbita p...	[more]
XP_004135957.1	9.4e-209	91.87	photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis sativus]...	[more]
XP_008461367.1	1.2e-208	91.36	PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Cucum...	[more]

BLAST of Sed0023953 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82660	1.5e-177	76.41	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis th...	[more]
Q5Z5A8	4.6e-174	76.25	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa s...	[more]
Q9AW48	1.8e-93	45.30	Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia the...	[more]
P48325	2.7e-81	47.22	Photosystem II stability/assembly factor HCF136 OS=Cyanophora paradoxa OX=2762 G...	[more]
P73069	2.7e-81	48.45	Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]

BLAST of Sed0023953 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CGP8	2.0e-209	91.60	Photosystem II stability/assembly factor OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1JT27	2.0e-209	92.50	Photosystem II stability/assembly factor OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0K5Y1	4.5e-209	91.87	Photosystem II stability/assembly factor OS=Cucumis sativus OX=3659 GN=Csa_7G420...	[more]
A0A1S3CFV0	5.9e-209	91.36	Photosystem II stability/assembly factor OS=Cucumis melo OX=3656 GN=LOC103499970...	[more]
A0A6J1GMA2	1.3e-208	92.00	Photosystem II stability/assembly factor OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Sed0023953 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23120.1	1.1e-178	76.41	photosystem II stability/assembly factor, chloroplast (HCF136)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016705	Photosynthesis system II assembly factor Ycf48/Hcf136	PIRSF	PIRSF017875	Photosystem_II_Ycf48-like	coord: 41..399 e-value: 3.6E-147 score: 487.5
IPR028203	Photosynthesis system II assembly factor Ycf48/Hcf136-like domain	PFAM	PF14870	PSII_BNR	coord: 76..397 e-value: 6.8E-124 score: 413.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 106..256 e-value: 1.9E-8 score: 35.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..38
None	No IPR available	PANTHER	PTHR47199	PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC	coord: 39..399
None	No IPR available	SUPERFAMILY	110296	Oligoxyloglucan reducing end-specific cellobiohydrolase	coord: 81..398

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023953.1	Sed0023953.1	mRNA
Sed0023953.2	Sed0023953.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding