Homology
BLAST of Sed0023847 vs. NCBI nr
Match:
XP_022943236.1 (ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 2985.7 bits (7739), Expect = 0.0e+00
Identity = 1467/1737 (84.46%), Postives = 1588/1737 (91.42%), Query Frame = 0
Query: 4 SSSASLCPPDSSLRCNP----QYLPRS---SSRP-------HDSPQPTSSNRANFVIDLV 63
SSS PPDSSL CN QYLPRS +SRP + S Q TS NRANFVIDLV
Sbjct: 9 SSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVIDLV 68
Query: 64 SENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMAGFWELRLDGL 123
++R ++K S+++L+AK +SKPDNFIVPQ GPV A+L+FKQWV+ALEAM FWELRLDGL
Sbjct: 69 LDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRLDGL 128
Query: 124 HDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDLLVVEIRRISN 183
HDFTPILKPR +LPSDADELH RLR+LFA+RI+RLMDGE V QKKRDL+ V+I RIS+
Sbjct: 129 HDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVQDWQKKRDLVKVQIDRISH 188
Query: 184 TLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNKLELSD-EDVG 243
+LR+P I TQ +L+EK++GLIVE++SI R EEFK AM YILD+VEG KLEL D EDVG
Sbjct: 189 SLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELPDSEDVG 248
Query: 244 VFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQ 303
VF+FD I+WN+IHS +LRECRRLED LPMYSCRR+ILRQI SQQVMVL GETGSGKSTQ
Sbjct: 249 VFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKSTQ 308
Query: 304 LVQFLADSGLSASKSIVCTQPRKISAISLAHRVREESRGCYDGDLISCYPSFSSAQQFNS 363
LVQFLADSGLS+SKSIVCTQPRKISAISLAHRVREESRGCYD D ISCYPSFSSAQQF S
Sbjct: 309 LVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPSFSSAQQFKS 368
Query: 364 KIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIM 423
KIIYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLM R+DLHLIIM
Sbjct: 369 KIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMERVDLHLIIM 428
Query: 424 SATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEI 483
SATANADQLS+YFFGCGIFHVPGRNFPVDIRYVPS +E S G C+VASYVTDV+RMASEI
Sbjct: 429 SATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMASEI 488
Query: 484 HWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQDHPGKRKVIF 543
HW+EKGG ILAFLTSQMEVEWACENFHAPGTV LAFHGK SFDEQ RVFQDHPGKRKVIF
Sbjct: 489 HWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRKVIF 548
Query: 544 ATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPG 603
ATNLAETSLTIPGVKYVIDPGWVKDSKFEPR+GMNILKVCRTS+SSANQRAGRAGRTEPG
Sbjct: 549 ATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTEPG 608
Query: 604 RCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAI 663
RCYRLY++S+FELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDAPSAE VDMAI
Sbjct: 609 RCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAI 668
Query: 664 RNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNS 723
RNLVQLGAITLN+ VYELT EGRNLVKLGIEPRLGKLIL CFNCRVRREGVVLAVLMTN+
Sbjct: 669 RNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILGCFNCRVRREGVVLAVLMTNA 728
Query: 724 SSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAK 783
SSIFCRVGK+EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL +ERKN+WCWENSINAK
Sbjct: 729 SSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSINAK 788
Query: 784 TMRRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGY 843
TMRRCQDAILELERCLKQELNIIIPSYWLWS L+ TDHDRNLKKCILASL+ENVAMF+GY
Sbjct: 789 TMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFTGY 848
Query: 844 DRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTIS 903
DRLGYEVAM GRH QLHPSCSLLIFSE+PKWVVFGEILSISNEYLVCVTAIDVDALSTIS
Sbjct: 849 DRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALSTIS 908
Query: 904 PPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVFRDDCIGVEVN 963
PPPLFDIS +EKHRLEVR LSGFG+T+LKRVCGKSNSNLISLTS VRKVF DDC+G+EVN
Sbjct: 909 PPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVFSDDCMGIEVN 968
Query: 964 INPNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSSPVALMGAGAK 1023
IN NEVL+FSRSENM+ V HF+N ILEYERKYL NECMEKCLYHGNGGS PVAL+G+GAK
Sbjct: 969 INQNEVLLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPPVALLGSGAK 1028
Query: 1024 IRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFGQEDDDKERGH 1083
IRHLELE+RYLTVDVF SNVD++DDKE+F+SLEKSVSGT+C IQKVP GQ+DDDKERGH
Sbjct: 1029 IRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDDKERGH 1088
Query: 1084 RITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAKVFWPRRLSKG 1143
RITFLTPDAAEKA KLDG FCGSLVKIIP++I AGCDNKLFSFPPVKAKVFWPRRLSKG
Sbjct: 1089 RITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVFWPRRLSKG 1148
Query: 1144 FAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELSEADILDVLRN 1203
FAVVKCN +DV FLVNDFSNLLIG RFLR E S KYNDCVTLSGIDKELSEADI ++LR+
Sbjct: 1149 FAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNILRS 1208
Query: 1204 ATDRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQVFPPQPKDFY 1263
ATDRKILD FL+RENPV++PP+ ACE+ALLKEIS FMPK++ H KCC+VQVF PQPKDFY
Sbjct: 1209 ATDRKILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPKDFY 1268
Query: 1264 LKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKHQL 1323
++AAI+FDGRLHLEAAKALE+LEGK+L +CFPWQKIKCQQLFHSTLSCTIPIFRVIK QL
Sbjct: 1269 MRAAITFDGRLHLEAAKALEYLEGKSLPICFPWQKIKCQQLFHSTLSCTIPIFRVIKCQL 1328
Query: 1324 NSLIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRGKIIDHASATP 1383
NSL+ES +KI G EC+LSQN+NGSYRVKLSANATKTVAELRRP+E L+RGKIIDHAS TP
Sbjct: 1329 NSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHASVTP 1388
Query: 1384 TVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQKLIQSLQKLHE 1443
TVLQHLTSRDGFDLINLLQREN VYILFDRQRLSLRIFGASE +A AE+KLIQSLQ LHE
Sbjct: 1389 TVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQTLHE 1448
Query: 1444 SKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHILSVLGSKDLKL 1503
KQLEI LRGKSRPPNLLKTVVEKFGPDLNGLKQKFP GFTLNTRHHILSV GSKDLK
Sbjct: 1449 RKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKDLKQ 1508
Query: 1504 EVETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCRQCLVEQFESA 1563
EVETIIYEL K T GG A+RPDDA+ACSICLC++EDD ELEACGH FCRQCLVEQFESA
Sbjct: 1509 EVETIIYELEK-TSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLVEQFESA 1568
Query: 1564 IKNQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSDGTYRFCPSPD 1623
IKN GSFP+CCAKQTC +PILLTDMR LLS+EKLEELFRAS+GAFVA D YRFCPSPD
Sbjct: 1569 IKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GDSAYRFCPSPD 1628
Query: 1624 CPSVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDPDSSLNEWRKD 1683
CPSVY+VASPD GEPFMCGAC++ETCTRCHLEYHPFLSCEQYRVFKEDPDSSL+EWRK
Sbjct: 1629 CPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRKG 1688
Query: 1684 KENVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLRSIHMAIV 1726
KENVKNCP C +TIEKI+GCNHIEC+CGRHICWVCL+YFGS DECYGHLRSIHMA V
Sbjct: 1689 KENVKNCPACGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
BLAST of Sed0023847 vs. NCBI nr
Match:
XP_023531305.1 (ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2985.3 bits (7738), Expect = 0.0e+00
Identity = 1470/1741 (84.43%), Postives = 1593/1741 (91.50%), Query Frame = 0
Query: 1 MKPSSSASLC-PPDSSLRCNP----QYLPRS---SSRP-------HDSPQPTSSNRANFV 60
MK SSS+++ PPDSSL CN QYLPRS +SRP + S Q TS NRANFV
Sbjct: 1 MKSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFV 60
Query: 61 IDLVSENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMAGFWELR 120
IDLV ++R ++K S+++L+AK +SKPDNFIVPQ GPV A+L+FKQWV+ALEAM FWELR
Sbjct: 61 IDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELR 120
Query: 121 LDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDLLVVEIR 180
LDGLHDFTPILKPR +LPSDADELH RLR+LFA RI+RLMDGE V QKKRDL+ V+I
Sbjct: 121 LDGLHDFTPILKPRINLPSDADELHDRLRNLFAGRIQRLMDGEKVRDWQKKRDLVKVQID 180
Query: 181 RISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNKLELSD- 240
RIS++LR+P I TQ +L+EK++GLIVE++SI R EEFK AM YILD+VEG KLELSD
Sbjct: 181 RISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSDI 240
Query: 241 EDVGVFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGSG 300
EDVGVF+FD I+WN+IHS +LRECRRLED LPMYSCRR+ILRQI SQQVMVL GETGSG
Sbjct: 241 EDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSG 300
Query: 301 KSTQLVQFLADSGLSASKSIVCTQPRKISAISLAHRVREESRGCYDGDLISCYPSFSSAQ 360
KSTQLVQFLADSGLS+SKSIVCTQPRKISAISLAHRVREESRGCYD D ISCYPSFSSAQ
Sbjct: 301 KSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPSFSSAQ 360
Query: 361 QFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLH 420
QF SKIIY TD+CLLQHYMNDKKLS VSCIIIDEAHERSLNTDLL ALLKSLLMVR+DLH
Sbjct: 361 QFKSKIIYTTDHCLLQHYMNDKKLSGVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDLH 420
Query: 421 LIIMSATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIRM 480
LIIMSATANADQLS+YFFGCGIFHVPGRNFPVDIRYVPS +E S G C+VASYVTDV+RM
Sbjct: 421 LIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRM 480
Query: 481 ASEIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQDHPGKR 540
ASEIHW+EKGG ILAFLTSQMEVEWACENFHAPGTV LAFHGK SFDEQ RVFQDHPGKR
Sbjct: 481 ASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKR 540
Query: 541 KVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGR 600
KVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPR+GMNILKVCRTS+SSANQRAGRAGR
Sbjct: 541 KVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGR 600
Query: 601 TEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGV 660
TEPGRCYRLY++S+FELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDAPSAE V
Sbjct: 601 TEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAV 660
Query: 661 DMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVL 720
DMAIRNLVQLGAITLN VYELT EGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVL
Sbjct: 661 DMAIRNLVQLGAITLNGNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVL 720
Query: 721 MTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENS 780
MTN+SSIFCRVGK+EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL +ERKN+WCWENS
Sbjct: 721 MTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENS 780
Query: 781 INAKTMRRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAM 840
INAKTMRRCQDAILELERCLKQELNIIIPSYWLWS L+ TDHDRNLKKCILASL+ENVAM
Sbjct: 781 INAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAM 840
Query: 841 FSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDAL 900
F+GYDRLGYEVAM GRH QLHPSCSLLIFSE+PKWVVFGEILSISNEYLVCVTAIDVDAL
Sbjct: 841 FTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDAL 900
Query: 901 STISPPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVFRDDCIG 960
STISPPPLFDIS +EKHRLEVR LSGFG+T+LKRVCGKSNSNLISLTS VRKVF DDCIG
Sbjct: 901 STISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVFSDDCIG 960
Query: 961 VEVNINPNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSSPVALMG 1020
+EVNIN NE+L+FSRSENM+ V HF+N ILEYERKYL NECMEKCLYHGNGGS PVAL+G
Sbjct: 961 IEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPPVALLG 1020
Query: 1021 AGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFGQEDDDK 1080
+GAKIRHLELE+RYLTVDVF SNVD++DDKE+F+SLEKSVSGT+C IQKVP GQ+DDDK
Sbjct: 1021 SGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICNIQKVPCSGQDDDDK 1080
Query: 1081 ERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAKVFWPRR 1140
ERGHRITFLTPDAAEKA KLDG FCGSLVKIIP++I AGCDNKLFSFPPVKAKVFWPRR
Sbjct: 1081 ERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVFWPRR 1140
Query: 1141 LSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELSEADILD 1200
LSKGFAVVKCN +DV FLVNDFSNLLIG RFLR E S KYNDCVTLSGIDKELSEADI +
Sbjct: 1141 LSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFN 1200
Query: 1201 VLRNATDRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQVFPPQP 1260
+LR+ATDR+ILD FL+RENPV++PP+ ACE+ALLKEIS FMPK++ H KCC+VQVF PQP
Sbjct: 1201 ILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQP 1260
Query: 1261 KDFYLKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTIPIFRVI 1320
KDFY++AAI+FDGRLHLEAAKALE+LEGK+L VCFPWQKIKCQQLFHSTLSCTIPIFRVI
Sbjct: 1261 KDFYMRAAINFDGRLHLEAAKALEYLEGKSLPVCFPWQKIKCQQLFHSTLSCTIPIFRVI 1320
Query: 1321 KHQLNSLIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRGKIIDHA 1380
K QLNSL+ES +KI G EC+LSQN+NGSYRVKLSANATKTVAELRRP+E L+RGKIIDHA
Sbjct: 1321 KCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHA 1380
Query: 1381 SATPTVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQKLIQSLQ 1440
S TPTVLQHLTSRDGFDLINLLQREN VYILFDRQRLSLRIFGASE +A AE+KLIQSLQ
Sbjct: 1381 SVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQ 1440
Query: 1441 KLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHILSVLGSK 1500
LH+ KQLEI LRGKSRPPNLLKTVVEKFGPDLNGLKQKFP GFTLNTRHHILSV GSK
Sbjct: 1441 TLHDRKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSK 1500
Query: 1501 DLKLEVETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCRQCLVEQ 1560
DLK EVETIIYEL K T GG A+RPDDA+ACSICLC++EDD ELEACGH FCRQCLVEQ
Sbjct: 1501 DLKQEVETIIYELEK-TSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLVEQ 1560
Query: 1561 FESAIKNQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSDGTYRFC 1620
FESAIKN GSFP+CCAKQTC +PILLTDMR LLS+EKLEELFRAS+GAFVA D YRFC
Sbjct: 1561 FESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GDSAYRFC 1620
Query: 1621 PSPDCPSVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDPDSSLNE 1680
PSPDCPSVY+VASPD GEPFMCGAC++ETCTRCHLEYHPFLSCEQYRVFKEDPDSSL+E
Sbjct: 1621 PSPDCPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDE 1680
Query: 1681 WRKDKENVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLRSIHMAI 1726
WRK KENVKNCPVC +TIEKI+GCNHIEC+CGRHICWVCL+YFGS DECYGHLRSIHMA
Sbjct: 1681 WRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAF 1739
BLAST of Sed0023847 vs. NCBI nr
Match:
KAG6600671.1 (ATP-dependent RNA helicase DEAH12, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2984.5 bits (7736), Expect = 0.0e+00
Identity = 1469/1742 (84.33%), Postives = 1594/1742 (91.50%), Query Frame = 0
Query: 1 MKPSSSASLC--PPDSSLRCNP----QYLPRS---SSRP-------HDSPQPTSSNRANF 60
MK SSS+S PPDSSL CN QYLPRS +SRP + S Q TS NRANF
Sbjct: 89 MKSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANF 148
Query: 61 VIDLVSENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMAGFWEL 120
VIDLV ++R ++K S+++L+AK +SKPDNFIVPQ GPV A+L+FKQWV+ALEAM FWEL
Sbjct: 149 VIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWEL 208
Query: 121 RLDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDLLVVEI 180
RLDGLHDFTPILKPR +LPSDADELH RLR+LFA+RI+RLMDGE V QKKRDL+ V+I
Sbjct: 209 RLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKVQI 268
Query: 181 RRISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNKLELSD 240
RIS++LR+P I TQ +L+EK++GLIVE++SI R EEFK AM YILD+VEG KLELSD
Sbjct: 269 DRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELSD 328
Query: 241 -EDVGVFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGS 300
EDVGVF+FD I+WN+IHS +LRECRRLED LPMYSCRR+ILRQI SQQVMVL GETGS
Sbjct: 329 IEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGS 388
Query: 301 GKSTQLVQFLADSGLSASKSIVCTQPRKISAISLAHRVREESRGCYDGDLISCYPSFSSA 360
GKSTQLVQFLADSGLS+SKSIVCTQPRKISAISLAHRVREESRGCYD D ISCYP+FSSA
Sbjct: 389 GKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFSSA 448
Query: 361 QQFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDL 420
QQF SKIIYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLMVR+DL
Sbjct: 449 QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRVDL 508
Query: 421 HLIIMSATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIR 480
HLIIMSATANADQLS+YFFGCGIFHVPGRNFPVDIRYVPS +E S G C+VASYVTDV+R
Sbjct: 509 HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVR 568
Query: 481 MASEIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQDHPGK 540
MASEIHW+EKGG ILAFLTSQMEVEWACENFHAPGTV LAFHGK SFDEQ RVFQDHPGK
Sbjct: 569 MASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGK 628
Query: 541 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAG 600
RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPR+GMNILKVCRTS+SSANQRAGRAG
Sbjct: 629 RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAG 688
Query: 601 RTEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEG 660
RTEPGRCYRLY++S+FELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDAPSAE
Sbjct: 689 RTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 748
Query: 661 VDMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV 720
VDMAIRNLVQLGAITLN+ VYELT EGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV
Sbjct: 749 VDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAV 808
Query: 721 LMTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWEN 780
LMTN+SSIFCRVGK+EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL +ERKN+WCWEN
Sbjct: 809 LMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWEN 868
Query: 781 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVA 840
SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWS L+ TDHDRNLKKCILASL+ENVA
Sbjct: 869 SINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVA 928
Query: 841 MFSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDA 900
MF+GYDRLGYEVAM GRH QLHPSCSLLIFSE+PKWVVFGEILSISNEYLVCVTAIDVDA
Sbjct: 929 MFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDA 988
Query: 901 LSTISPPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVFRDDCI 960
LSTISPPPLFDIS +EKHRLEVR LSGFG+T+LKRVCGKSNSNL SLTS VRKVF DDCI
Sbjct: 989 LSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDDCI 1048
Query: 961 GVEVNINPNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSSPVALM 1020
G+EVNIN NE+L+FSRSENM+ V HF+N ILEYERKYL NECMEKCLYHGNGGS PVAL+
Sbjct: 1049 GIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPPVALL 1108
Query: 1021 GAGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFGQEDDD 1080
G+GAKIRHLELE+RYLTVDVF SNVD++DDKE+F+SLEKSVSGT+C IQKVP G +DDD
Sbjct: 1109 GSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGLDDDD 1168
Query: 1081 KERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAKVFWPR 1140
KERGHRITFLTPDAAEKA KLDG FCGSLVKIIP++I AGCDNKLFSFPPVKAKV WPR
Sbjct: 1169 KERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLWPR 1228
Query: 1141 RLSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELSEADIL 1200
RLSKGFAVVKCN +DV FLVNDFSNLLIG RFLR E S KYNDCVTLSGIDKELSEADI
Sbjct: 1229 RLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIF 1288
Query: 1201 DVLRNATDRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQVFPPQ 1260
++LR+ATDR+ILD FL+RENPV++PP+ ACE+ALLKEIS FMPK++ H KCC+VQVF PQ
Sbjct: 1289 NILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQ 1348
Query: 1261 PKDFYLKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTIPIFRV 1320
PKDFY++AAI+FDGRLHLEAAKALE+LEGK+LSVCFPWQKIKCQQLFHSTLSCTIPIFRV
Sbjct: 1349 PKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIFRV 1408
Query: 1321 IKHQLNSLIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRGKIIDH 1380
IK QLNSL+ES +KI G EC+LSQN+NGSYRVKLSANATKTVAELRRP+E L+RGKIIDH
Sbjct: 1409 IKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDH 1468
Query: 1381 ASATPTVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQKLIQSL 1440
AS TPTVLQHLTSRDGFDLINLLQREN VYILFDRQRLSLRIFGASE +A AE+KLIQSL
Sbjct: 1469 ASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSL 1528
Query: 1441 QKLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHILSVLGS 1500
Q LHE KQLEI LRGKSRPPNLLKTVVEKFGPDLNGLKQKFP GFTLNTRHHILSV GS
Sbjct: 1529 QTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGS 1588
Query: 1501 KDLKLEVETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCRQCLVE 1560
KDLK EVETIIYEL K T GG A+RPDDA+ACSICLC++EDD ELEACGH FCRQCL+E
Sbjct: 1589 KDLKQEVETIIYELEK-TSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLLE 1648
Query: 1561 QFESAIKNQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSDGTYRF 1620
QFESAIKN GSFP+CCAKQTC +PILLTDMR LLS+EKLEELFRAS+GAFVA D YRF
Sbjct: 1649 QFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GDSAYRF 1708
Query: 1621 CPSPDCPSVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDPDSSLN 1680
CPSPDCPSVY+VASP+ GEPFMCGAC++ETCTRCHLEYHPFLSCEQYRVFKEDPDSSL+
Sbjct: 1709 CPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLD 1768
Query: 1681 EWRKDKENVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLRSIHMA 1726
EWRK KENVKNCPVC +TIEKI+GCNHIEC+CGRHICWVCL+YFGS DECYGHLRSIHMA
Sbjct: 1769 EWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMA 1828
BLAST of Sed0023847 vs. NCBI nr
Match:
KAG7031310.1 (ATP-dependent RNA helicase DEAH12, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2983.0 bits (7732), Expect = 0.0e+00
Identity = 1469/1744 (84.23%), Postives = 1594/1744 (91.40%), Query Frame = 0
Query: 1 MKPSSSAS----LCPPDSSLRCNP----QYLPRS---SSRP-------HDSPQPTSSNRA 60
MK SSS+S PPDSSL CN QYLPRS +SRP + S Q TS NRA
Sbjct: 1 MKSSSSSSSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRA 60
Query: 61 NFVIDLVSENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMAGFW 120
NFVIDLV ++R ++K S+++L+AK +SKPDNFIVPQ GPV A+L+FKQWV+ALEAM FW
Sbjct: 61 NFVIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFW 120
Query: 121 ELRLDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDLLVV 180
ELRLDGLHDFTPILKPR +LPSDADELH RLR+LFA+RI+RLMDGE V QKKRDL+ V
Sbjct: 121 ELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDLVKV 180
Query: 181 EIRRISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNKLEL 240
+I RIS++LR+P I TQ +L+EK++GLIVE++SI R EEFK AM YILD+VEG KLEL
Sbjct: 181 QIDRISHSLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLEL 240
Query: 241 SD-EDVGVFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGET 300
SD EDVGVF+FD I+WN+IHS +LRECRRLED LPMYSCRR+ILRQI SQQVMVL GET
Sbjct: 241 SDIEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGET 300
Query: 301 GSGKSTQLVQFLADSGLSASKSIVCTQPRKISAISLAHRVREESRGCYDGDLISCYPSFS 360
GSGKSTQLVQFLADSGLS+SKSIVCTQPRKISAISLAHRVREESRGCYD D ISCYP+FS
Sbjct: 301 GSGKSTQLVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPAFS 360
Query: 361 SAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRI 420
SAQQF SKIIYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLMVR+
Sbjct: 361 SAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMVRV 420
Query: 421 DLHLIIMSATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDV 480
DLHLIIMSATANADQLS+YFFGCGIFHVPGRNFPVDIRYVPS +E S G C+VASYVTDV
Sbjct: 421 DLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDV 480
Query: 481 IRMASEIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQDHP 540
+RMASEIHW+EKGG ILAFLTSQMEVEWACENFHAPGTV LAFHGK SFDEQ RVFQDHP
Sbjct: 481 VRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHP 540
Query: 541 GKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGR 600
GKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPR+GMNILKVCRTS+SSANQRAGR
Sbjct: 541 GKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGR 600
Query: 601 AGRTEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSA 660
AGRTEPGRCYRLY++S+FELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDAPSA
Sbjct: 601 AGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSA 660
Query: 661 EGVDMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVL 720
E VDMAIRNLVQLGAITLN+ VYELT EGRNLVKLGIEPRLGKLILSCFNCRVRREGVVL
Sbjct: 661 EAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVL 720
Query: 721 AVLMTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCW 780
AVLMTN+SSIFCRVGK+EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL +ERKN+WCW
Sbjct: 721 AVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCW 780
Query: 781 ENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAEN 840
ENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWS L+ TDHDRNLKKCILASL+EN
Sbjct: 781 ENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSEN 840
Query: 841 VAMFSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDV 900
VAMF+GYDRLGYEVAM GRH QLHPSCSLLIFSE+PKWVVFGEILSISNEYLVCVTAIDV
Sbjct: 841 VAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDV 900
Query: 901 DALSTISPPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVFRDD 960
DALSTISPPPLFDIS +EKHRLEVR LSGFG+T+LKRVCGKSNSNL SLTS VRKVF DD
Sbjct: 901 DALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLSSLTSHVRKVFSDD 960
Query: 961 CIGVEVNINPNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSSPVA 1020
CIG+EVNIN NE+L+FSRSENM+ V HF+N ILEYERKYL NECMEKCLYHGNGGS VA
Sbjct: 961 CIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPSVA 1020
Query: 1021 LMGAGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFGQED 1080
L+G+GAKIRHLELE+RYLTVDVF SNVD++DDKE+F+SLEKSVSGT+C IQKVP GQ+D
Sbjct: 1021 LLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDD 1080
Query: 1081 DDKERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAKVFW 1140
DDKERGHRITFLTPDAAEKA KLDG FCGSLVKIIP++I AGCDNKLFSFPPVKAKV W
Sbjct: 1081 DDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVLW 1140
Query: 1141 PRRLSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELSEAD 1200
PRRLSKGFAVVKCN +DV FLVNDFSNLLIG RFLR E S KYNDCVTLSGIDKELSEAD
Sbjct: 1141 PRRLSKGFAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEAD 1200
Query: 1201 ILDVLRNATDRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQVFP 1260
I ++LR+ATDR+ILD FL+RENPV++PP+ ACE+ALLKEIS FMPK++ H KCC+VQVF
Sbjct: 1201 IFNILRSATDREILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQ 1260
Query: 1261 PQPKDFYLKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTIPIF 1320
PQPKDFY++AAI+FDGRLHLEAAKALE+LEGK+LSVCFPWQKIKCQQLFHSTLSCTIPIF
Sbjct: 1261 PQPKDFYMRAAITFDGRLHLEAAKALEYLEGKSLSVCFPWQKIKCQQLFHSTLSCTIPIF 1320
Query: 1321 RVIKHQLNSLIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRGKII 1380
RVIK QLNSL+ES +KI G EC+LSQN+NGSYRVKLSANATKTVAELRRP+E L+RGKII
Sbjct: 1321 RVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKII 1380
Query: 1381 DHASATPTVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQKLIQ 1440
DHAS TPTVLQHLTSRDGFDLINLLQREN VYILFDRQRLSLRIFGASE +A AE+KLIQ
Sbjct: 1381 DHASVTPTVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQ 1440
Query: 1441 SLQKLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHILSVL 1500
SLQ LHE KQLEI LRGKSRPPNLLKTVVEKFGPDLNGLKQKFP GFTLNTRHHILSV
Sbjct: 1441 SLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVH 1500
Query: 1501 GSKDLKLEVETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCRQCL 1560
GSKDLK EVETIIYEL K T GG A+RPDDA+ACSICLC++EDD ELEACGH FCRQCL
Sbjct: 1501 GSKDLKQEVETIIYELEK-TSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCL 1560
Query: 1561 VEQFESAIKNQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSDGTY 1620
+EQFESAIKN GSFP+CCAKQTC +PILLTDMR LLS+EKLEELFRAS+GAFVA D Y
Sbjct: 1561 LEQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GDSAY 1620
Query: 1621 RFCPSPDCPSVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDPDSS 1680
RFCPSPDCPSVY+VASP+ GEPFMCGAC++ETCTRCHLEYHPFLSCEQYRVFKEDPDSS
Sbjct: 1621 RFCPSPDCPSVYRVASPNTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSS 1680
Query: 1681 LNEWRKDKENVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLRSIH 1726
L+EWRK KENVKNCPVC +TIEKI+GCNHIEC+CGRHICWVCL+YFGS DECYGHLRSIH
Sbjct: 1681 LDEWRKGKENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIH 1740
BLAST of Sed0023847 vs. NCBI nr
Match:
XP_022969963.1 (ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 2978.7 bits (7721), Expect = 0.0e+00
Identity = 1470/1747 (84.14%), Postives = 1589/1747 (90.96%), Query Frame = 0
Query: 1 MKPSSSAS-------LCPPDSSLRCNP----QYLPRS---SSRP-------HDSPQPTSS 60
MK SSS+S PPDSSL CN QYLPRS +SRP + S Q TS
Sbjct: 1 MKSSSSSSSSSSTTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSP 60
Query: 61 NRANFVIDLVSENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMA 120
NRANFVIDLV ++R ++K S+++L+AK +SKPDNFIVPQ GPV A+L+FKQWV+ALEAM
Sbjct: 61 NRANFVIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMV 120
Query: 121 GFWELRLDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDL 180
FWELRLDGLHDFTPILKPR +LPSDADELH RLR+LFA+RI+RLMDGE V QKKRDL
Sbjct: 121 TFWELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDL 180
Query: 181 LVVEIRRISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNK 240
+ V+I RIS++LR+P I TQ +LKEK++GLIVE++SI R EEFK AM YILD+VEG K
Sbjct: 181 VKVQIDRISHSLRKPLGIATQFELKEKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKK 240
Query: 241 LELSD-EDVGVFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLE 300
LELSD EDVGVF+FD I+WN+IHS +LRECRRLED LPMYSCRR+ILRQI SQQVMVL
Sbjct: 241 LELSDSEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIHSQQVMVLI 300
Query: 301 GETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAISLAHRVREESRGCYDGDLISCYP 360
GETGSGKSTQLVQFLADSGLS+S+SIVCTQPRKISA SLAHRVREESRGCYD D ISCYP
Sbjct: 301 GETGSGKSTQLVQFLADSGLSSSESIVCTQPRKISATSLAHRVREESRGCYDDDCISCYP 360
Query: 361 SFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLM 420
SFSSAQQF SKIIYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLM
Sbjct: 361 SFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLM 420
Query: 421 VRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYV 480
VR+DLHLIIMSATANADQLS+YFFGCGIFHVPGRNFPVDIRYVPS +E S G C VASYV
Sbjct: 421 VRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCTVASYV 480
Query: 481 TDVIRMASEIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQ 540
TDV+RMASEIHW+EKGG ILAFLTSQMEVEWACENFHAPGTV LAFHGK SFDEQ RVFQ
Sbjct: 481 TDVVRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQ 540
Query: 541 DHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQR 600
DHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPR+GMNILKVCRTS+SSANQR
Sbjct: 541 DHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQR 600
Query: 601 AGRAGRTEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDA 660
AGRAGRTEPGRCYRLY++S+FELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDA
Sbjct: 601 AGRAGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDA 660
Query: 661 PSAEGVDMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREG 720
PSAE VDMAIRNLVQLGAITLN+ VYELT EGRNLVKLGIEPRLGKLILSCFNCRVRREG
Sbjct: 661 PSAEAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREG 720
Query: 721 VVLAVLMTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNK 780
VVLAVLMTN+SSIFCRVGK+EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL +ERKN+
Sbjct: 721 VVLAVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQ 780
Query: 781 WCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASL 840
WCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWS L+ TDHDRNLKKCILASL
Sbjct: 781 WCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASL 840
Query: 841 AENVAMFSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTA 900
+ENVAMF+GYDRLGYEVAM GRH QLHPSCSLLIFSE+PKWVVFGEILSISNEYLVCVTA
Sbjct: 841 SENVAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTA 900
Query: 901 IDVDALSTISPPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVF 960
IDVDALSTISPPPLFDIS +EKHRLEVR LSGFG+T+LKRVCGKSNSNLISLTS VRKVF
Sbjct: 901 IDVDALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVF 960
Query: 961 RDDCIGVEVNINPNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSS 1020
DDCIG+EVNIN NE+L+FSRSENM+ V HF+N ILEYERKYL NECMEKCLYHGN GS
Sbjct: 961 SDDCIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNDGSP 1020
Query: 1021 PVALMGAGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFG 1080
PVAL+G+GAKIRHLELE+RYLTVDVF SNVD++DDKE+F+SLEKSVSGT+C IQKVP G
Sbjct: 1021 PVALLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSG 1080
Query: 1081 QEDDDKERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAK 1140
Q+DDDKERGHRITFLTPDAAEKA KLDG FCGSLVKIIP++I AGCDNKLFSFPPVKAK
Sbjct: 1081 QDDDDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAK 1140
Query: 1141 VFWPRRLSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELS 1200
VFWPRRLSKGFAVVKCN +DV FLVNDFSNLL G RFLR E S KYNDCVTLSGIDKELS
Sbjct: 1141 VFWPRRLSKGFAVVKCNSYDVSFLVNDFSNLLNGERFLRCEPSIKYNDCVTLSGIDKELS 1200
Query: 1201 EADILDVLRNATDRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQ 1260
EADI +VLR+ATDRKILD FL+RENPV +PP+ ACE+ALLKEIS FMPK++ H KCC+VQ
Sbjct: 1201 EADIFNVLRSATDRKILDLFLVRENPVSNPPVNACEEALLKEISAFMPKSHPHVKCCYVQ 1260
Query: 1261 VFPPQPKDFYLKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTI 1320
VF PQPKDFY++AAI+FDGRLHLEAAKALE+LEGKAL VCFPWQKIKCQQLFHSTLSCTI
Sbjct: 1261 VFQPQPKDFYMRAAITFDGRLHLEAAKALEYLEGKALPVCFPWQKIKCQQLFHSTLSCTI 1320
Query: 1321 PIFRVIKHQLNSLIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRG 1380
PIFRVIK QLNSL+ES +KI G EC+LSQN+NGSYRVKLSANATKTVAELRRP+E L+RG
Sbjct: 1321 PIFRVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRG 1380
Query: 1381 KIIDHASATPTVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQK 1440
KIIDHAS TPTVLQHL SRDGFDLINLLQREN VYIL DRQRLSLRIFGASE +A AE+K
Sbjct: 1381 KIIDHASLTPTVLQHLNSRDGFDLINLLQRENEVYILVDRQRLSLRIFGASENVAAAERK 1440
Query: 1441 LIQSLQKLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHIL 1500
LIQSLQ LHE KQLEI LRGKSRPPNLLKTVVEKFGPDLNGLKQKFP GFTLNTRHHIL
Sbjct: 1441 LIQSLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHIL 1500
Query: 1501 SVLGSKDLKLEVETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCR 1560
SV GSKDLK +VETIIYEL K T GG A+RPDDA+ACSICLC++EDD ELEACGH FCR
Sbjct: 1501 SVHGSKDLKHDVETIIYELEK-TSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCR 1560
Query: 1561 QCLVEQFESAIKNQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSD 1620
QCLVEQFESAIKN GSFP+CCAKQTC +PILLTDMR LLS+EKLEELFRAS+GAFVA D
Sbjct: 1561 QCLVEQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GD 1620
Query: 1621 GTYRFCPSPDCPSVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDP 1680
YRFCPSPDCPSVY+VASPD GEPFMCGAC++ETCTRCHLEYHPFLSCEQYRVFKEDP
Sbjct: 1621 SAYRFCPSPDCPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDP 1680
Query: 1681 DSSLNEWRKDKENVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLR 1726
DSSL+EWRK +ENVKNCPVC +TIEKI+GCNHIEC+CGRHICWVCL+YFGS DECYGHLR
Sbjct: 1681 DSSLDEWRKGRENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLR 1740
BLAST of Sed0023847 vs. ExPASy Swiss-Prot
Match:
F4KGU4 (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g10370 PE=3 SV=1)
HSP 1 Score: 1855.9 bits (4806), Expect = 0.0e+00
Identity = 923/1708 (54.04%), Postives = 1235/1708 (72.31%), Query Frame = 0
Query: 36 PTSSNRANFVIDLVSENRALS---------KFSLQLLIAKIHSKPDNFIVPQAGPVAAYL 95
P + R NF++ L+ A S K ++ L ++ VPQ G +A
Sbjct: 76 PVTRARPNFIVQLLHPAAANSDTKLCFSTKKQEIESLALLCEIPEESIHVPQFGCIAGSF 135
Query: 96 YFKQWVAALEAMAGFWELRLDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMD 155
F+QWV A A+ W+ RL G H+F P L P +PSD +EL RLR LF+ I LM+
Sbjct: 136 SFRQWVDARSAVVALWDYRLQGKHEFVPELIPNVIVPSDMNELKDRLRDLFSSHILSLME 195
Query: 156 -GELVTGLQKKRDLLVVEIRR-ISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEF 215
GE G++K R + + R+ +S + +R + ++ EKK+ + E + + +LEEF
Sbjct: 196 NGE---GVKKVRLEIEEKSRQVVSFSSKRGLK----FEVFEKKKAIEAERDLVVNRLEEF 255
Query: 216 KRAMLYILDFV---EGNKLELSDE---DVGVFRFDGAINWNQIHSFVLRECRRLEDGLPM 275
AM IL ++ +G + +L DE DV VF +GA +W +IH + RECRRLEDGLP+
Sbjct: 256 NNAMKSILRYLIGQDGYEFDLDDEEEGDVAVFCLEGAYDWRRIHCLIRRECRRLEDGLPI 315
Query: 276 YSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAISLA 335
Y+ RRQIL++I +Q+MVL GETGSGKSTQLVQFLADSG++AS+SIVCTQPRKI+A++LA
Sbjct: 316 YAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLA 375
Query: 336 HRVREESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDE 395
RVREES GCY+ + +SC P+FSS ++ +SK++YMTDNCLLQHYM D+ LS +SC+IIDE
Sbjct: 376 DRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDE 435
Query: 396 AHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRNFPVDI 455
AHERSLNTDLLLALLK LL RIDL L+IMSATA+A QLS+YFF CGI V GRNFPV+I
Sbjct: 436 AHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEI 495
Query: 456 RYVPSSNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQMEVEWACENFHAPG 515
Y PS E++ +ASYV DV++MA EIH EK G ILAFLTSQ EVEWACE F P
Sbjct: 496 VYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFITPS 555
Query: 516 TVSLAFHGKLSFDEQLRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEP 575
++L HGKLSF+EQ RVFQ+HPG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EP
Sbjct: 556 AIALPLHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEP 615
Query: 576 RSGMNILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVA 635
R+GM+ILKVCR S+SSA QRAGRAGRTEPGRCYRLY+K++F+ M+ + EPEIR+VHLGVA
Sbjct: 616 RTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVA 675
Query: 636 LLKILALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGI 695
LL++LALGV N+ +F+FVDAP E + MA++NLVQLGA+ N V+ELT+EG LVKLG+
Sbjct: 676 LLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGL 735
Query: 696 EPRLGKLILSCFNCRVRREGVVLAVLMTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDL 755
EP+LGKLIL CF R+ +EG+VLA +M N+SSIFCRVG +DK+K+D KVQFC+ +GDL
Sbjct: 736 EPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDL 795
Query: 756 FTLLSVYKQYEALSKERKNKWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLW 815
FTLLSVYK++ +L +ER+NKWCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W
Sbjct: 796 FTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVW 855
Query: 816 SPLQRTDHDRNLKKCILASLAENVAMFSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPK 875
+P + T HD++LK ILASLAENVAM++GY++LGYEVA+ G+ QLHPSCSLL F ++P
Sbjct: 856 NPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPS 915
Query: 876 WVVFGEILSISNEYLVCVTAIDVDALSTISPPPLFDISHLEKHRLEVRILSGFGRTILKR 935
WVVFGE+LSI ++YLVCVTA D +AL + PPP FD+S +++ RL ++ + G T+LKR
Sbjct: 916 WVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRLRIKKVVGCSSTVLKR 975
Query: 936 VCGKSNSNLISLTSRVRKVFRDDCIGVEVNINPNEVLVFSRSENMEEVCHFLNGILEYER 995
CGKSN +L+S+ SR R + D+ IG++V+++ NE+ +++ +ME+V +N LE E+
Sbjct: 976 FCGKSNRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYAPPLDMEKVSALVNDALECEK 1035
Query: 996 KYLRNECMEKCLYHGNGGSSPVALMGAGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFI 1055
K++ NEC+EK LYHG G P+AL G+GA+I+HLE+++R+LTVDV + D +DD+E+
Sbjct: 1036 KWMHNECLEKYLYHGR-GQVPIALFGSGAQIKHLEVDQRFLTVDVLYYGDDVVDDRELLT 1095
Query: 1056 SLEKSVSGTVCAIQKVPNFGQEDDDKERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIP 1115
LEK + G++C+I K Q+ D+KE+ RITFLTP++A KA+++ F GS++K+ P
Sbjct: 1096 FLEKKIDGSICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFYFKGSVLKLFP 1155
Query: 1116 LQINAGCDNKLFSFPPVKAKVFWPRRLSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRS 1175
G K+ F V AK+ WPRR S G +KC D+ ++ D S+L IG ++
Sbjct: 1156 SLSTGGGIFKMPYFSSVTAKIRWPRRESSGRGCLKCPSGDIHRILGDISSLEIGTNYVHI 1215
Query: 1176 ELSTKYNDCVTLSGIDKELSEADILDVLRNATDRKILDFFLIREN-PVDDPPLIACEDAL 1235
+ + ND + +SG+ +LSEA++LDVL T R+ L+FF+ R+ V P ACE+ L
Sbjct: 1216 QRDQQSNDSILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEEL 1275
Query: 1236 LKEISFFMPKTNLHAKCCHVQVFPPQPKDFYLKAAISFDGRLHLEAAKALEFLEGKALSV 1295
K I M N C VQVF P+ +++++A I FDGRLH EAAKAL+ L G+ L
Sbjct: 1276 HKRIFARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHFEAAKALQELNGEVLPG 1335
Query: 1296 CFPWQKIKCQQLFHSTLSCTIPIFRVIKHQLNSLIESFRKIAGVECSLSQNVNGSYRVKL 1355
C PWQKIKC+QLF S++ C+ I+ +K QLN L+ F + G EC L NG+YRVK+
Sbjct: 1336 CLPWQKIKCEQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKI 1395
Query: 1356 SANATKTVAELRRPMEELMRGKIIDHASATPTVLQHLTSRDGFDLINLLQRENGVYILFD 1415
+A AT+ VAE+RR +EEL+RG+ I+H T VLQHL SRDG +L+ +Q+E YIL D
Sbjct: 1396 TAYATRPVAEMRRELEELLRGRPINHPGFTRRVLQHLMSRDGINLMRKIQQETETYILLD 1455
Query: 1416 RQRLSLRIFGASEKIAVAEQKLIQSLQKLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDL 1475
R L++RI G SEKIA AEQ+LIQ+L HESKQLEI LRG P+L+K VV++FGP+L
Sbjct: 1456 RHNLTVRICGTSEKIAKAEQELIQALMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPEL 1515
Query: 1476 NGLKQKFPGVGFTLNTRHHILSVLGSKDLKLEVETIIYELAKMTGGGSAKRPDDAEA-CS 1535
G+K+K GV LNTR+H++ V GSK+++ EV+ ++ ELA+ ++PD+ E C
Sbjct: 1516 QGIKEKVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAR-EKSALGEKPDEIEVECP 1575
Query: 1536 ICLCELEDDMLELEACGHRFCRQCLVEQFESAIKNQGSFPICCAKQTCLTPILLTDMRSL 1595
ICL E+ DD LE C H FC+ CL+EQFE++++N +FPI C+ C PI+L DMR+L
Sbjct: 1576 ICLSEV-DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVLADMRAL 1635
Query: 1596 LSSEKLEELFRASMGAFVASSDGTYRFCPSPDCPSVYQVASPDMSGEPFMCGACYTETCT 1655
LS EKL+ELF AS+ +FV SSDG +RFC +PDCPSVY+VA P SGEPF+CGAC++E CT
Sbjct: 1636 LSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFICGACHSEICT 1695
Query: 1656 RCHLEYHPFLSCEQYRVFKEDPDSSLNEWRKDKENVKNCPVCTHTIEKIDGCNHIECRCG 1715
RCHLEYHP ++CE+Y+ FKE+PD SL +W K K NVK CP+C TIEK DGCNH++CRCG
Sbjct: 1696 RCHLEYHPLITCERYKKFKENPDLSLKDWAKGK-NVKECPICKSTIEKTDGCNHMKCRCG 1755
Query: 1716 RHICWVCLEYFGSGDECYGHLRSIHMAI 1725
+HICW CL+ F + CY HLR+IH I
Sbjct: 1756 KHICWTCLDVFTQEEPCYAHLRTIHGGI 1771
BLAST of Sed0023847 vs. ExPASy Swiss-Prot
Match:
P0CE10 (ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01020 PE=3 SV=1)
HSP 1 Score: 1852.4 bits (4797), Expect = 0.0e+00
Identity = 912/1703 (53.55%), Postives = 1230/1703 (72.23%), Query Frame = 0
Query: 36 PTSSNRANFVIDLV------SENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFK 95
P + R NF++ L+ S+ + K ++ + ++ VPQ G +AA F+
Sbjct: 76 PVTRARPNFIVQLLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVPQFGCIAASFSFR 135
Query: 96 QWVAALEAMAGFWELRLDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGEL 155
QWV A A+ W+ RL G HDF P L P +PSD DEL RLR LF+ + LM+
Sbjct: 136 QWVDARSAVVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENG- 195
Query: 156 VTGLQKKRDLLVVEIRRISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAML 215
G++K R + + R++++ ++ + ++ EKK+ L E + + +L+EF AM
Sbjct: 196 -QGVKKVRMEIDDKSRQVASF---SSKRGLKFEVFEKKKALEAERDLVVNRLDEFNNAMK 255
Query: 216 YILDFV---EGNKLEL---SDEDVGVFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRR 275
IL ++ +G + ++ DEDV VF +GA +W +IH +LRECRRLEDGLP+Y+ RR
Sbjct: 256 SILRYLIGQDGYEFDVDDEDDEDVAVFSLEGAYDWRRIHYLILRECRRLEDGLPIYAYRR 315
Query: 276 QILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAISLAHRVRE 335
QIL++I +Q+MVL GETGSGKSTQLVQFLADSG++AS+SIVCTQPRKI+A++L RVRE
Sbjct: 316 QILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVRE 375
Query: 336 ESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERS 395
ES GCY+ + +SC P+FSS ++ +SK++YMTDNCLLQHYM D+ LS +SC+IIDEAHERS
Sbjct: 376 ESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERS 435
Query: 396 LNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPS 455
LNTDLLLALL+ LL RIDL L+IMSATA+A+QLS+Y F CGI HV GRNFPV+I Y PS
Sbjct: 436 LNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPS 495
Query: 456 SNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLA 515
E++ +ASY DV++MA EIH EK G ILAFLTSQ EVEWACE F AP ++L
Sbjct: 496 GTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALP 555
Query: 516 FHGKLSFDEQLRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMN 575
HGKLSF+EQ VFQ++PG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EPR+GM+
Sbjct: 556 LHGKLSFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMS 615
Query: 576 ILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKIL 635
ILKVC+ S+SSA QRAGRAGRTEPGRCYRLY+K++F+ M+ + EPEIR+VHLGVALL++L
Sbjct: 616 ILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRML 675
Query: 636 ALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLG 695
ALG+ N+ F+FVDAP E + MAI+NLVQLGA+ N V ELT+EG LVKLG+EP+LG
Sbjct: 676 ALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLG 735
Query: 696 KLILSCFNCRVRREGVVLAVLMTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLS 755
KLIL CF R+ +EG+VLA +M N+SSIFCRVG +DK+K+D KVQFC+ +GDLFTLLS
Sbjct: 736 KLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLS 795
Query: 756 VYKQYEALSKERKNKWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSPLQR 815
VYK++ +L ++R+NKWCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W+P +
Sbjct: 796 VYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEG 855
Query: 816 TDHDRNLKKCILASLAENVAMFSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFG 875
T HD+ LK ILASLAENVAM++GYD+LGYEVA+ + QLHPSCSLL F ++P WVVFG
Sbjct: 856 TKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFG 915
Query: 876 EILSISNEYLVCVTAIDVDALSTISPPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKS 935
E+LSI ++YLVCVTA D +AL + PPP FD S +++ RL V+ + G T+LKR CGKS
Sbjct: 916 ELLSIVDQYLVCVTAFDFEALYMLDPPPPFDASQMDERRLRVKKVVGCSSTVLKRFCGKS 975
Query: 936 NSNLISLTSRVRKVFRDDCIGVEVNINPNEVLVFSRSENMEEVCHFLNGILEYERKYLRN 995
N +L+S+ SR R + D+ IG++V+++ NE+ +++ +ME+V +N LE E+K++RN
Sbjct: 976 NRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYASPLDMEKVSALVNDALECEKKWMRN 1035
Query: 996 ECMEKCLYHGNGGSSPVALMGAGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKS 1055
EC+EK L+HG G P+AL G+GA+I+HLE+++R+LTVDV + D +DD+E+ LEK
Sbjct: 1036 ECLEKYLFHGR-GQIPIALFGSGAQIKHLEVDQRFLTVDVHYYGDDVVDDRELLTFLEKK 1095
Query: 1056 VSGTVCAIQKVPNFGQEDDDKERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINA 1115
+ G +C+I K Q+ D+KE+ RITFLTP++A KA+++ F GS++K+ P
Sbjct: 1096 IDGCICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFDFKGSVLKVFPSLSTG 1155
Query: 1116 GCDNKLFSFPPVKAKVFWPRRLSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTK 1175
G K+ F V AK+ WPR+ S G +KC D+ ++ D ++L IG ++ +
Sbjct: 1156 GGIFKMPYFSSVTAKIRWPRKESSGRGCLKCPSGDIHSILGDITSLEIGTNYVHIQRDQL 1215
Query: 1176 YNDCVTLSGIDKELSEADILDVLRNATDRKILDFFLIREN-PVDDPPLIACEDALLKEIS 1235
ND + +SG+ +LSEA++LDVL T R+ L+FF+ R+ V P ACE+ L K I
Sbjct: 1216 SNDSILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIF 1275
Query: 1236 FFMPKTNLHAKCCHVQVFPPQPKDFYLKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQ 1295
M N C VQVF P+ +++++A I FDGRLHLEAAKAL+ L G+ L C PWQ
Sbjct: 1276 ARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHLEAAKALQELNGEVLPGCLPWQ 1335
Query: 1296 KIKCQQLFHSTLSCTIPIFRVIKHQLNSLIESFRKIAGVECSLSQNVNGSYRVKLSANAT 1355
KIKC+QLF S++ C+ I+ +K QLN L+ F + G EC L NG+YRVK++A AT
Sbjct: 1336 KIKCEQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYAT 1395
Query: 1356 KTVAELRRPMEELMRGKIIDHASATPTVLQHLTSRDGFDLINLLQRENGVYILFDRQRLS 1415
+ VAE+RR +EEL+RGK I+H TP V+QHL SRDG +L+ +Q+E YIL DR L+
Sbjct: 1396 RPVAEMRRELEELLRGKPINHPGFTPRVVQHLMSRDGINLMRKIQQETETYILLDRHNLT 1455
Query: 1416 LRIFGASEKIAVAEQKLIQSLQKLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQ 1475
+RI G SEKIA AEQ+L+QSL HESKQLEI LRG P+L+K VV++FGP+L G+K+
Sbjct: 1456 VRICGTSEKIAKAEQELVQSLMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKE 1515
Query: 1476 KFPGVGFTLNTRHHILSVLGSKDLKLEVETIIYELAKMTGGGSAKRPDDAE-ACSICLCE 1535
K GV LNTR+H++ V GSK+++ EV+ ++ ELA+ ++PD+ E C ICL E
Sbjct: 1516 KVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAR-EKSALGEKPDEIELECPICLSE 1575
Query: 1536 LEDDMLELEACGHRFCRQCLVEQFESAIKNQGSFPICCAKQTCLTPILLTDMRSLLSSEK 1595
+ DD LE C H FC+ CL+EQFE++++N +FPI C+ C PI++ DMR+LLS EK
Sbjct: 1576 V-DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRALLSQEK 1635
Query: 1596 LEELFRASMGAFVASSDGTYRFCPSPDCPSVYQVASPDMSGEPFMCGACYTETCTRCHLE 1655
L+EL AS+ AFV SSDG RFC +PDCPS+Y+VA P SGEPF+CGAC++ETCTRCHLE
Sbjct: 1636 LDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHSETCTRCHLE 1695
Query: 1656 YHPFLSCEQYRVFKEDPDSSLNEWRKDKENVKNCPVCTHTIEKIDGCNHIECRCGRHICW 1715
YHP ++CE+Y+ FKE+PD SL +W K K+ VK CP+C TIEK DGCNH++CRCG+HICW
Sbjct: 1696 YHPLITCERYKKFKENPDLSLKDWAKGKD-VKECPICKSTIEKTDGCNHLQCRCGKHICW 1755
Query: 1716 VCLEYFGSGDECYGHLRSIHMAI 1725
CL+ F + CY HLR+IH I
Sbjct: 1756 TCLDVFTQAEPCYAHLRTIHGGI 1768
BLAST of Sed0023847 vs. ExPASy Swiss-Prot
Match:
Q38953 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2)
HSP 1 Score: 406.4 bits (1043), Expect = 1.6e-111
Identity = 238/667 (35.68%), Postives = 383/667 (57.42%), Query Frame = 0
Query: 254 DGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKIS 313
+ LP+Y ++++++ + QV+V+ GETGSGK+TQ+ Q+LA++G + I CTQPR+++
Sbjct: 513 ESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVA 572
Query: 314 AISLAHRVREESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSC 373
A+S+A RV EE GC G+ + F ++ I YMTD LL+ + D+ LS S
Sbjct: 573 AMSVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSV 632
Query: 374 IIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRN 433
I++DEAHER+++TD+L LLK L+ R+DL LI+ SAT +A++ S YFF C IF +PGR
Sbjct: 633 IMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRT 692
Query: 434 FPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQMEVEWACEN 493
FPV+I Y D Y+ + +IH E G IL FLT Q E++ AC++
Sbjct: 693 FPVEILYTKQPETD---------YLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQS 752
Query: 494 FH---------APGTVSLAFHGKLSFDEQLRVFQ-DHPGKRKVIFATNLAETSLTIPGVK 553
+ P + L + L + Q R+F PGKRKV+ ATN+AE SLTI G+
Sbjct: 753 LYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIY 812
Query: 554 YVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAKSEF-ELM 613
YV+DPG+ K + + P+ G+ L + S++SA QRAGRAGRT PG+CYRLY +S + M
Sbjct: 813 YVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM 872
Query: 614 SPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLGAITLNNK 673
P PEI++++LG+ L + A+G+ ++ FDF+D P + + A+ L LGA+ ++
Sbjct: 873 PPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGAL---DE 932
Query: 674 VYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNSSSIFCRVGKIEDKL 733
LTK GR + + +EP L K++L+ + E ++ + M + +IF R E +
Sbjct: 933 EGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDE-ILTMIAMIQTGNIFYR--PREKQA 992
Query: 734 KSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAKTMRRCQDAILELER 793
++D ++ +F P+GD TLL+VY+ ++A K WC+EN I ++++RR QD
Sbjct: 993 QADQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQD------- 1052
Query: 794 CLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDRLGYEVAMNGRHA 853
++++L I+ Y L + + ++K I A + A + GY + +
Sbjct: 1053 -VRKQLLSIMDKYKL-DVVTAGKNFTKIRKAITAGFFFHGARKDPQE--GYRTLVENQPV 1112
Query: 854 QLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISPP--PLFDISHLEK 908
+HPS +L F +P WV++ +++ + EY+ VT ID L ++P + D + + K
Sbjct: 1113 YIHPSSAL--FQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSK 1148
BLAST of Sed0023847 vs. ExPASy Swiss-Prot
Match:
Q09530 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans OX=6239 GN=mog-5 PE=1 SV=1)
HSP 1 Score: 392.5 bits (1007), Expect = 2.5e-107
Identity = 240/647 (37.09%), Postives = 369/647 (57.03%), Query Frame = 0
Query: 254 DGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKIS 313
+ LP+++ ++ ++ + Q++V+ GETGSGK+TQ+ Q+ ++GL I CTQPR+++
Sbjct: 538 ESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVA 597
Query: 314 AISLAHRVREESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSC 373
A+S+A RV EE GC G + F ++ I YMTD LL+ + D LS S
Sbjct: 598 AMSVAKRVAEE-YGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSL 657
Query: 374 IIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRN 433
I++DEAHER+++TD+L LLK+ R +L LII SAT ++ + SEYF IF +PGR
Sbjct: 658 IMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRT 717
Query: 434 FPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQMEVEWACEN 493
FPV+I Y D + A+++T +IH E G +L FLT Q E++ +CE
Sbjct: 718 FPVEILYTREPESD----YLEAAHIT-----VMQIHLTEPPGDVLVFLTGQEEIDTSCEV 777
Query: 494 FH---------APGTVSLAFHGKLSFDEQLRVFQDHP-GKRKVIFATNLAETSLTIPGVK 553
+ P + L +G L + Q R+F P GKRKV+ ATN+AETSLTI G+
Sbjct: 778 LYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIF 837
Query: 554 YVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAKSEF-ELM 613
YV+DPG+VK + P+SGM+ L V S+++A QR+GRAGRT PG+CYRLY + F + M
Sbjct: 838 YVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEM 897
Query: 614 SPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLGAITLNNK 673
P PEI++ +L LL++ A+G+ N+ DFDF+DAP + + A+ L L A+ +
Sbjct: 898 LPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL 957
Query: 674 VYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNSSSIFCRVGKIEDKL 733
LTK GR + + +EP L KL++ + E V+ V M N +IF R + +D
Sbjct: 958 ---LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEE-VLTIVAMLNVQNIFYRPKEKQD-- 1017
Query: 734 KSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAKTMRRCQDAILELER 793
+D +K +F P+GD TLL+VY ++ + WC+EN I ++M+R QD
Sbjct: 1018 HADQKKAKFHQPEGDHLTLLAVYNSWK--NHHFSQPWCFENFIQVRSMKRAQD------- 1077
Query: 794 CLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDRLGYEVAMNGRHA 853
++++L I+ + L D R ++K I + N A + GY +G++
Sbjct: 1078 -IRKQLLGIMDRHKLLMVSCGRDVSR-VQKAICSGFFRNAAKRDPQE--GYRTLTDGQNV 1137
Query: 854 QLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISP 890
+HPS + F ++P+WVV+ E++ + EY+ VTAID L +P
Sbjct: 1138 YIHPSSA--CFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAP 1153
BLAST of Sed0023847 vs. ExPASy Swiss-Prot
Match:
Q54F05 (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1)
HSP 1 Score: 385.2 bits (988), Expect = 3.9e-105
Identity = 229/654 (35.02%), Postives = 369/654 (56.42%), Query Frame = 0
Query: 247 RECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVC 306
R + + LP++ R L+ + Q++V+ GETGSGK+TQ+ Q+LA++G I C
Sbjct: 499 RSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGC 558
Query: 307 TQPRKISAISLAHRVREESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDK 366
TQPR+++A+S++ RV EE GC G + F + I +MTD LL+ + D
Sbjct: 559 TQPRRVAAMSVSKRVAEEF-GCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDP 618
Query: 367 KLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGI 426
LS S II+DEAHER+++TD+L LLK L R +L ++I SAT A++ S+YF +
Sbjct: 619 NLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQL 678
Query: 427 FHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQME 486
F +PGR FPVDIRY D Y+ + +IH E G IL FLT Q E
Sbjct: 679 FIIPGRTFPVDIRYTKDPEAD---------YLDASLITVMQIHLSEPPGDILLFLTGQEE 738
Query: 487 VEWACE---------NFHAPGTVSLAFHGKLSFDEQLRVFQD-HPGKRKVIFATNLAETS 546
++ AC+ + P + L + L + Q ++F+ PG RKV+ ATN+AETS
Sbjct: 739 IDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETS 798
Query: 547 LTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAK 606
LTI G+ YVIDPG+ K F P++GM+ L V S+++A QR+GRAGRT PG+CYRLY +
Sbjct: 799 LTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTE 858
Query: 607 SEFE-LMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLG 666
S F+ M PEI++ +LG +L + A+G+ ++ +FDF+D P + + A+ L LG
Sbjct: 859 SAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLG 918
Query: 667 AITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNSSSIFCRV 726
A+ ++ LT+ GR + + ++P+L K++++ + E ++ V M + ++F R
Sbjct: 919 AL---DEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDE-ILTVVAMLSVQNVFYR- 978
Query: 727 GKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAKTMRRCQD 786
E + +D +K +F P+GD TLL+VY+ ++ + + N WC+EN + A+++RR QD
Sbjct: 979 -PKEKQALADQKKAKFFQPEGDHLTLLNVYESWK--NSKFSNPWCFENFVQARSLRRAQD 1038
Query: 787 AILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDRLGYEV 846
++++L I+ Y L + + ++K I + N + + GY+
Sbjct: 1039 --------VRKQLITIMDRYKL-DIISAGRNYTKIQKAICSGFFANASKKDPNE--GYKT 1098
Query: 847 AMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISP 890
+ G+ +HPS +L F+ P WV++ E++ + EY+ V ID L ++P
Sbjct: 1099 LVEGQPVYIHPSSTL--FNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAP 1121
BLAST of Sed0023847 vs. ExPASy TrEMBL
Match:
A0A6J1FR66 (ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448026 PE=4 SV=1)
HSP 1 Score: 2985.7 bits (7739), Expect = 0.0e+00
Identity = 1467/1737 (84.46%), Postives = 1588/1737 (91.42%), Query Frame = 0
Query: 4 SSSASLCPPDSSLRCNP----QYLPRS---SSRP-------HDSPQPTSSNRANFVIDLV 63
SSS PPDSSL CN QYLPRS +SRP + S Q TS NRANFVIDLV
Sbjct: 9 SSSTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSPNRANFVIDLV 68
Query: 64 SENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMAGFWELRLDGL 123
++R ++K S+++L+AK +SKPDNFIVPQ GPV A+L+FKQWV+ALEAM FWELRLDGL
Sbjct: 69 LDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMVRFWELRLDGL 128
Query: 124 HDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDLLVVEIRRISN 183
HDFTPILKPR +LPSDADELH RLR+LFA+RI+RLMDGE V QKKRDL+ V+I RIS+
Sbjct: 129 HDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVQDWQKKRDLVKVQIDRISH 188
Query: 184 TLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNKLELSD-EDVG 243
+LR+P I TQ +L+EK++GLIVE++SI R EEFK AM YILD+VEG KLEL D EDVG
Sbjct: 189 SLRKPLGIATQFELREKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKKLELPDSEDVG 248
Query: 244 VFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQ 303
VF+FD I+WN+IHS +LRECRRLED LPMYSCRR+ILRQI SQQVMVL GETGSGKSTQ
Sbjct: 249 VFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIYSQQVMVLIGETGSGKSTQ 308
Query: 304 LVQFLADSGLSASKSIVCTQPRKISAISLAHRVREESRGCYDGDLISCYPSFSSAQQFNS 363
LVQFLADSGLS+SKSIVCTQPRKISAISLAHRVREESRGCYD D ISCYPSFSSAQQF S
Sbjct: 309 LVQFLADSGLSSSKSIVCTQPRKISAISLAHRVREESRGCYDDDCISCYPSFSSAQQFKS 368
Query: 364 KIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIM 423
KIIYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLM R+DLHLIIM
Sbjct: 369 KIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLMERVDLHLIIM 428
Query: 424 SATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEI 483
SATANADQLS+YFFGCGIFHVPGRNFPVDIRYVPS +E S G C+VASYVTDV+RMASEI
Sbjct: 429 SATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCIVASYVTDVVRMASEI 488
Query: 484 HWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQDHPGKRKVIF 543
HW+EKGG ILAFLTSQMEVEWACENFHAPGTV LAFHGK SFDEQ RVFQDHPGKRKVIF
Sbjct: 489 HWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQDHPGKRKVIF 548
Query: 544 ATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPG 603
ATNLAETSLTIPGVKYVIDPGWVKDSKFEPR+GMNILKVCRTS+SSANQRAGRAGRTEPG
Sbjct: 549 ATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQRAGRAGRTEPG 608
Query: 604 RCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAI 663
RCYRLY++S+FELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDAPSAE VDMAI
Sbjct: 609 RCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAI 668
Query: 664 RNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNS 723
RNLVQLGAITLN+ VYELT EGRNLVKLGIEPRLGKLIL CFNCRVRREGVVLAVLMTN+
Sbjct: 669 RNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILGCFNCRVRREGVVLAVLMTNA 728
Query: 724 SSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAK 783
SSIFCRVGK+EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL +ERKN+WCWENSINAK
Sbjct: 729 SSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQWCWENSINAK 788
Query: 784 TMRRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGY 843
TMRRCQDAILELERCLKQELNIIIPSYWLWS L+ TDHDRNLKKCILASL+ENVAMF+GY
Sbjct: 789 TMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASLSENVAMFTGY 848
Query: 844 DRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTIS 903
DRLGYEVAM GRH QLHPSCSLLIFSE+PKWVVFGEILSISNEYLVCVTAIDVDALSTIS
Sbjct: 849 DRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTAIDVDALSTIS 908
Query: 904 PPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVFRDDCIGVEVN 963
PPPLFDIS +EKHRLEVR LSGFG+T+LKRVCGKSNSNLISLTS VRKVF DDC+G+EVN
Sbjct: 909 PPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVFSDDCMGIEVN 968
Query: 964 INPNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSSPVALMGAGAK 1023
IN NEVL+FSRSENM+ V HF+N ILEYERKYL NECMEKCLYHGNGGS PVAL+G+GAK
Sbjct: 969 INQNEVLLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNGGSPPVALLGSGAK 1028
Query: 1024 IRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFGQEDDDKERGH 1083
IRHLELE+RYLTVDVF SNVD++DDKE+F+SLEKSVSGT+C IQKVP GQ+DDDKERGH
Sbjct: 1029 IRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSGQDDDDKERGH 1088
Query: 1084 RITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAKVFWPRRLSKG 1143
RITFLTPDAAEKA KLDG FCGSLVKIIP++I AGCDNKLFSFPPVKAKVFWPRRLSKG
Sbjct: 1089 RITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAKVFWPRRLSKG 1148
Query: 1144 FAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELSEADILDVLRN 1203
FAVVKCN +DV FLVNDFSNLLIG RFLR E S KYNDCVTLSGIDKELSEADI ++LR+
Sbjct: 1149 FAVVKCNSYDVSFLVNDFSNLLIGERFLRCEPSIKYNDCVTLSGIDKELSEADIFNILRS 1208
Query: 1204 ATDRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQVFPPQPKDFY 1263
ATDRKILD FL+RENPV++PP+ ACE+ALLKEIS FMPK++ H KCC+VQVF PQPKDFY
Sbjct: 1209 ATDRKILDLFLVRENPVNNPPVNACEEALLKEISAFMPKSHPHVKCCYVQVFQPQPKDFY 1268
Query: 1264 LKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKHQL 1323
++AAI+FDGRLHLEAAKALE+LEGK+L +CFPWQKIKCQQLFHSTLSCTIPIFRVIK QL
Sbjct: 1269 MRAAITFDGRLHLEAAKALEYLEGKSLPICFPWQKIKCQQLFHSTLSCTIPIFRVIKCQL 1328
Query: 1324 NSLIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRGKIIDHASATP 1383
NSL+ES +KI G EC+LSQN+NGSYRVKLSANATKTVAELRRP+E L+RGKIIDHAS TP
Sbjct: 1329 NSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRGKIIDHASVTP 1388
Query: 1384 TVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQKLIQSLQKLHE 1443
TVLQHLTSRDGFDLINLLQREN VYILFDRQRLSLRIFGASE +A AE+KLIQSLQ LHE
Sbjct: 1389 TVLQHLTSRDGFDLINLLQRENEVYILFDRQRLSLRIFGASENVAAAERKLIQSLQTLHE 1448
Query: 1444 SKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHILSVLGSKDLKL 1503
KQLEI LRGKSRPPNLLKTVVEKFGPDLNGLKQKFP GFTLNTRHHILSV GSKDLK
Sbjct: 1449 RKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHILSVHGSKDLKQ 1508
Query: 1504 EVETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCRQCLVEQFESA 1563
EVETIIYEL K T GG A+RPDDA+ACSICLC++EDD ELEACGH FCRQCLVEQFESA
Sbjct: 1509 EVETIIYELEK-TSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCRQCLVEQFESA 1568
Query: 1564 IKNQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSDGTYRFCPSPD 1623
IKN GSFP+CCAKQTC +PILLTDMR LLS+EKLEELFRAS+GAFVA D YRFCPSPD
Sbjct: 1569 IKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GDSAYRFCPSPD 1628
Query: 1624 CPSVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDPDSSLNEWRKD 1683
CPSVY+VASPD GEPFMCGAC++ETCTRCHLEYHPFLSCEQYRVFKEDPDSSL+EWRK
Sbjct: 1629 CPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDPDSSLDEWRKG 1688
Query: 1684 KENVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLRSIHMAIV 1726
KENVKNCP C +TIEKI+GCNHIEC+CGRHICWVCL+YFGS DECYGHLRSIHMA V
Sbjct: 1689 KENVKNCPACGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLRSIHMAFV 1743
BLAST of Sed0023847 vs. ExPASy TrEMBL
Match:
A0A6J1I2G6 (ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468977 PE=4 SV=1)
HSP 1 Score: 2978.7 bits (7721), Expect = 0.0e+00
Identity = 1470/1747 (84.14%), Postives = 1589/1747 (90.96%), Query Frame = 0
Query: 1 MKPSSSAS-------LCPPDSSLRCNP----QYLPRS---SSRP-------HDSPQPTSS 60
MK SSS+S PPDSSL CN QYLPRS +SRP + S Q TS
Sbjct: 1 MKSSSSSSSSSSTTVFRPPDSSLTCNRPSYLQYLPRSPNGASRPGFPVKFHNCSGQRTSP 60
Query: 61 NRANFVIDLVSENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMA 120
NRANFVIDLV ++R ++K S+++L+AK +SKPDNFIVPQ GPV A+L+FKQWV+ALEAM
Sbjct: 61 NRANFVIDLVLDHRGVAKCSVEVLMAKCNSKPDNFIVPQGGPVVAFLFFKQWVSALEAMV 120
Query: 121 GFWELRLDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDL 180
FWELRLDGLHDFTPILKPR +LPSDADELH RLR+LFA+RI+RLMDGE V QKKRDL
Sbjct: 121 TFWELRLDGLHDFTPILKPRINLPSDADELHDRLRNLFAERIQRLMDGEKVRDWQKKRDL 180
Query: 181 LVVEIRRISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNK 240
+ V+I RIS++LR+P I TQ +LKEK++GLIVE++SI R EEFK AM YILD+VEG K
Sbjct: 181 VKVQIDRISHSLRKPLGIATQFELKEKRKGLIVEKDSIMRNTEEFKSAMRYILDYVEGKK 240
Query: 241 LELSD-EDVGVFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLE 300
LELSD EDVGVF+FD I+WN+IHS +LRECRRLED LPMYSCRR+ILRQI SQQVMVL
Sbjct: 241 LELSDSEDVGVFKFDETISWNRIHSLILRECRRLEDSLPMYSCRREILRQIHSQQVMVLI 300
Query: 301 GETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAISLAHRVREESRGCYDGDLISCYP 360
GETGSGKSTQLVQFLADSGLS+S+SIVCTQPRKISA SLAHRVREESRGCYD D ISCYP
Sbjct: 301 GETGSGKSTQLVQFLADSGLSSSESIVCTQPRKISATSLAHRVREESRGCYDDDCISCYP 360
Query: 361 SFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLM 420
SFSSAQQF SKIIYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLL ALLKSLLM
Sbjct: 361 SFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLFALLKSLLM 420
Query: 421 VRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYV 480
VR+DLHLIIMSATANADQLS+YFFGCGIFHVPGRNFPVDIRYVPS +E S G C VASYV
Sbjct: 421 VRVDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIRYVPSLDEGSSGPCTVASYV 480
Query: 481 TDVIRMASEIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQ 540
TDV+RMASEIHW+EKGG ILAFLTSQMEVEWACENFHAPGTV LAFHGK SFDEQ RVFQ
Sbjct: 481 TDVVRMASEIHWKEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKQSFDEQFRVFQ 540
Query: 541 DHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQR 600
DHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPR+GMNILKVCRTS+SSANQR
Sbjct: 541 DHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRNGMNILKVCRTSQSSANQR 600
Query: 601 AGRAGRTEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDA 660
AGRAGRTEPGRCYRLY++S+FELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDA
Sbjct: 601 AGRAGRTEPGRCYRLYSQSDFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDA 660
Query: 661 PSAEGVDMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREG 720
PSAE VDMAIRNLVQLGAITLN+ VYELT EGRNLVKLGIEPRLGKLILSCFNCRVRREG
Sbjct: 661 PSAEAVDMAIRNLVQLGAITLNSNVYELTNEGRNLVKLGIEPRLGKLILSCFNCRVRREG 720
Query: 721 VVLAVLMTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNK 780
VVLAVLMTN+SSIFCRVGK+EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL +ERKN+
Sbjct: 721 VVLAVLMTNASSIFCRVGKVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPRERKNQ 780
Query: 781 WCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASL 840
WCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWS L+ TDHDRNLKKCILASL
Sbjct: 781 WCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSSLKPTDHDRNLKKCILASL 840
Query: 841 AENVAMFSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTA 900
+ENVAMF+GYDRLGYEVAM GRH QLHPSCSLLIFSE+PKWVVFGEILSISNEYLVCVTA
Sbjct: 841 SENVAMFTGYDRLGYEVAMTGRHVQLHPSCSLLIFSEKPKWVVFGEILSISNEYLVCVTA 900
Query: 901 IDVDALSTISPPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVF 960
IDVDALSTISPPPLFDIS +EKHRLEVR LSGFG+T+LKRVCGKSNSNLISLTS VRKVF
Sbjct: 901 IDVDALSTISPPPLFDISLMEKHRLEVRTLSGFGKTLLKRVCGKSNSNLISLTSHVRKVF 960
Query: 961 RDDCIGVEVNINPNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSS 1020
DDCIG+EVNIN NE+L+FSRSENM+ V HF+N ILEYERKYL NECMEKCLYHGN GS
Sbjct: 961 SDDCIGIEVNINQNEILLFSRSENMDAVYHFVNDILEYERKYLWNECMEKCLYHGNDGSP 1020
Query: 1021 PVALMGAGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFG 1080
PVAL+G+GAKIRHLELE+RYLTVDVF SNVD++DDKE+F+SLEKSVSGT+C IQKVP G
Sbjct: 1021 PVALLGSGAKIRHLELEKRYLTVDVFRSNVDSIDDKELFMSLEKSVSGTICTIQKVPCSG 1080
Query: 1081 QEDDDKERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAK 1140
Q+DDDKERGHRITFLTPDAAEKA KLDG FCGSLVKIIP++I AGCDNKLFSFPPVKAK
Sbjct: 1081 QDDDDKERGHRITFLTPDAAEKALKLDGGFFCGSLVKIIPMRITAGCDNKLFSFPPVKAK 1140
Query: 1141 VFWPRRLSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELS 1200
VFWPRRLSKGFAVVKCN +DV FLVNDFSNLL G RFLR E S KYNDCVTLSGIDKELS
Sbjct: 1141 VFWPRRLSKGFAVVKCNSYDVSFLVNDFSNLLNGERFLRCEPSIKYNDCVTLSGIDKELS 1200
Query: 1201 EADILDVLRNATDRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQ 1260
EADI +VLR+ATDRKILD FL+RENPV +PP+ ACE+ALLKEIS FMPK++ H KCC+VQ
Sbjct: 1201 EADIFNVLRSATDRKILDLFLVRENPVSNPPVNACEEALLKEISAFMPKSHPHVKCCYVQ 1260
Query: 1261 VFPPQPKDFYLKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTI 1320
VF PQPKDFY++AAI+FDGRLHLEAAKALE+LEGKAL VCFPWQKIKCQQLFHSTLSCTI
Sbjct: 1261 VFQPQPKDFYMRAAITFDGRLHLEAAKALEYLEGKALPVCFPWQKIKCQQLFHSTLSCTI 1320
Query: 1321 PIFRVIKHQLNSLIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRG 1380
PIFRVIK QLNSL+ES +KI G EC+LSQN+NGSYRVKLSANATKTVAELRRP+E L+RG
Sbjct: 1321 PIFRVIKCQLNSLLESLKKIDGAECTLSQNINGSYRVKLSANATKTVAELRRPVEALLRG 1380
Query: 1381 KIIDHASATPTVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQK 1440
KIIDHAS TPTVLQHL SRDGFDLINLLQREN VYIL DRQRLSLRIFGASE +A AE+K
Sbjct: 1381 KIIDHASLTPTVLQHLNSRDGFDLINLLQRENEVYILVDRQRLSLRIFGASENVAAAERK 1440
Query: 1441 LIQSLQKLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHIL 1500
LIQSLQ LHE KQLEI LRGKSRPPNLLKTVVEKFGPDLNGLKQKFP GFTLNTRHHIL
Sbjct: 1441 LIQSLQTLHERKQLEIHLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPEAGFTLNTRHHIL 1500
Query: 1501 SVLGSKDLKLEVETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCR 1560
SV GSKDLK +VETIIYEL K T GG A+RPDDA+ACSICLC++EDD ELEACGH FCR
Sbjct: 1501 SVHGSKDLKHDVETIIYELEK-TSGGLAERPDDADACSICLCDIEDDRFELEACGHHFCR 1560
Query: 1561 QCLVEQFESAIKNQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSD 1620
QCLVEQFESAIKN GSFP+CCAKQTC +PILLTDMR LLS+EKLEELFRAS+GAFVA D
Sbjct: 1561 QCLVEQFESAIKNHGSFPVCCAKQTCQSPILLTDMRYLLSNEKLEELFRASLGAFVA-GD 1620
Query: 1621 GTYRFCPSPDCPSVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDP 1680
YRFCPSPDCPSVY+VASPD GEPFMCGAC++ETCTRCHLEYHPFLSCEQYRVFKEDP
Sbjct: 1621 SAYRFCPSPDCPSVYRVASPDTCGEPFMCGACFSETCTRCHLEYHPFLSCEQYRVFKEDP 1680
Query: 1681 DSSLNEWRKDKENVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLR 1726
DSSL+EWRK +ENVKNCPVC +TIEKI+GCNHIEC+CGRHICWVCL+YFGS DECYGHLR
Sbjct: 1681 DSSLDEWRKGRENVKNCPVCGYTIEKIEGCNHIECKCGRHICWVCLDYFGSSDECYGHLR 1740
BLAST of Sed0023847 vs. ExPASy TrEMBL
Match:
A0A5A7TQC6 (ATP-dependent RNA helicase DEAH12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00960 PE=4 SV=1)
HSP 1 Score: 2923.3 bits (7577), Expect = 0.0e+00
Identity = 1430/1735 (82.42%), Postives = 1565/1735 (90.20%), Query Frame = 0
Query: 1 MKPSSSASLCPPDSSLRCNP----QYLPRS---SSRPHD-SPQPTSSNRANFVIDLVSEN 60
MK SSS + PPDSS RCN +LPRS S P S Q NRANF IDLV E+
Sbjct: 1 MKSSSSTASRPPDSSFRCNRPSNLHFLPRSPNASDLPSKFSAQQNCPNRANFAIDLVLEH 60
Query: 61 RALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMAGFWELRLDGLHDF 120
R LSK S++LLIAK SKPDNFI+PQAG V+A+L+FKQWV+ALE+M G WELRL+G HDF
Sbjct: 61 RTLSKCSVELLIAKCISKPDNFIIPQAGSVSAFLFFKQWVSALESMVGLWELRLNGFHDF 120
Query: 121 TPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDLLVVEIRRISNTLR 180
TPILKPR +LPSD DELH RLR+LFA+RI+RLMDG+ V Q K DL++V+I RIS+ LR
Sbjct: 121 TPILKPRINLPSDVDELHGRLRNLFAERIKRLMDGDKVRHWQNKYDLVLVQIDRISDILR 180
Query: 181 RPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNKLELSDE-DVGVFR 240
RP R +L EKK+GL+VE+ESI RK+EEF AM +ILD VEG K+E SD D+G+F
Sbjct: 181 RPLRTDAAFELNEKKKGLLVEKESIMRKMEEFNSAMHHILDHVEGKKVETSDSLDMGIFT 240
Query: 241 FDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQ 300
FDG INWN+IHS +LRECRRLEDGLPMYSCR++ILRQI+ QQVMVL GETGSGKSTQLVQ
Sbjct: 241 FDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSGKSTQLVQ 300
Query: 301 FLADSGLSASKSIVCTQPRKISAISLAHRVREESRGC-YDGDLISCYPSFSSAQQFNSKI 360
FLADSGLS SKSIVCTQPRKISA+ LAHRVREESRGC YD D ISCYPSFSSAQQF SKI
Sbjct: 301 FLADSGLSGSKSIVCTQPRKISAVLLAHRVREESRGCYYDDDYISCYPSFSSAQQFKSKI 360
Query: 361 IYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA 420
IYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA
Sbjct: 361 IYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA 420
Query: 421 TANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHW 480
TANADQLS+YFF CGIF VPGR+FPVDI+YVPSSNE + GSC+V SYVTDV++MASEIHW
Sbjct: 421 TANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGTSGSCIVPSYVTDVVQMASEIHW 480
Query: 481 QEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQDHPGKRKVIFAT 540
QEKGGAILAFLTSQMEVEWACENFHAPGTV LAFHGKLSFDEQ RVFQDHPGKRKVIFAT
Sbjct: 481 QEKGGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFAT 540
Query: 541 NLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRC 600
NLAETSLTIPGVKYVIDPGWVKDSKFEP SGMNILKVCRTS+SSANQRAGRAGRTEPGRC
Sbjct: 541 NLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRC 600
Query: 601 YRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRN 660
YRLY +SEFELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDAPSAE VDMAIRN
Sbjct: 601 YRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRN 660
Query: 661 LVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNSSS 720
L+QLGAITLNNKVYELT EG NLVKLGIEPRLGKLILSCF+CRVRREGVVLAVLMTN+SS
Sbjct: 661 LIQLGAITLNNKVYELTNEGSNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASS 720
Query: 721 IFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAKTM 780
IFCRVG++EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL KERKN+WCWENSINAKTM
Sbjct: 721 IFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWENSINAKTM 780
Query: 781 RRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDR 840
RRCQDAILELERCLKQEL+IIIPSYWLWSPL+ +DHDRN+KKCIL SLAENVAMF+GYDR
Sbjct: 781 RRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVAMFTGYDR 840
Query: 841 LGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISPP 900
LGYEVAM G+H QLHPSCSLLIFSERPKWVVF EILSI NEYL+CVTA DVDAL T+SPP
Sbjct: 841 LGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFSEILSIVNEYLICVTAFDVDALLTLSPP 900
Query: 901 PLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVFRDDCIGVEVNIN 960
PLFDIS++EKHRLE R+LSGFG+T+LKRVCGKSNSNL+SLTS VRKVF D+CIG+EVNIN
Sbjct: 901 PLFDISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTSHVRKVFSDNCIGIEVNIN 960
Query: 961 PNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSSPVALMGAGAKIR 1020
NEV++FSR+ENM+EVCHF+N +LEYERKYL NECMEKCLYHGNGGS+PVAL+GAGAKIR
Sbjct: 961 QNEVMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIR 1020
Query: 1021 HLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFGQEDDDKERGHRI 1080
HLELE+RYLTV F NVD++DDKE F SLE VSGT+C+IQKVPN G + DD+ RG+RI
Sbjct: 1021 HLELEKRYLTVYAFRLNVDSIDDKEFFTSLENFVSGTICSIQKVPNSGLDVDDRGRGYRI 1080
Query: 1081 TFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAKVFWPRRLSKGFA 1140
TFLTPDAAEKASK+D DSFCGSL+KIIP Q+ AGCDNK+F+FPPVKAKVFWPRRLSKGFA
Sbjct: 1081 TFLTPDAAEKASKIDCDSFCGSLMKIIPSQLTAGCDNKMFTFPPVKAKVFWPRRLSKGFA 1140
Query: 1141 VVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELSEADILDVLRNAT 1200
VVKCN+ DVGF++NDFS+LLIGGRFLR E S KYNDCVT+SGIDKELSEADIL+VLR AT
Sbjct: 1141 VVKCNINDVGFILNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADILNVLRTAT 1200
Query: 1201 DRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQVFPPQPKDFYLK 1260
DRKILD FL+REN VD+PP+ +CE++LLKEIS FMPK+N H KCC VQVFPPQPKDFY+K
Sbjct: 1201 DRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKSNPHVKCCRVQVFPPQPKDFYMK 1260
Query: 1261 AAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKHQLNS 1320
AAI+FDGRLHLEAAKALEFLEGKAL VC PWQKIKCQQLFHSTLSCTIPI+RVIKHQLNS
Sbjct: 1261 AAITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIPIYRVIKHQLNS 1320
Query: 1321 LIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRGKIIDHASATPTV 1380
L+ESFR+I GVEC+LSQNVNGSYRVKLSANATKTVAELRRP+EEL+RGKIID AS TPTV
Sbjct: 1321 LLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDDASLTPTV 1380
Query: 1381 LQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQKLIQSLQKLHESK 1440
+QHLTSRDGFDLINLLQRENGVYILFDRQRL LRIFGASE IA AEQKLIQSL+ +HESK
Sbjct: 1381 VQHLTSRDGFDLINLLQRENGVYILFDRQRLGLRIFGASENIAAAEQKLIQSLRLIHESK 1440
Query: 1441 QLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHILSVLGSKDLKLEV 1500
QLEI LRGKS P NLLK VVEKFGPDLNGLKQKFPG GFTLNTR HIL V GSKDLK EV
Sbjct: 1441 QLEIHLRGKSWPSNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEV 1500
Query: 1501 ETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCRQCLVEQFESAIK 1560
ETI++ELA M+ GGS +RPDDA+ C ICLC++EDD ELEACG FCRQCLVEQFESAIK
Sbjct: 1501 ETIVFELAAMS-GGSGERPDDADCCPICLCDIEDDRFELEACGDHFCRQCLVEQFESAIK 1560
Query: 1561 NQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSDGTYRFCPSPDCP 1620
NQG FP+CCAKQ C TPI+L DMR+LLSSEKLEELFRAS+GAF+ASSDG YRFCPSPDCP
Sbjct: 1561 NQGRFPVCCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPSPDCP 1620
Query: 1621 SVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDPDSSLNEWRKDKE 1680
SVY+VA P+M GEPFMC ACY+ETC RCHLEYHPFLSCEQYRVFKEDPDSSL EWRK KE
Sbjct: 1621 SVYRVARPNMPGEPFMCEACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWRKGKE 1680
Query: 1681 NVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLRSIHMAIV 1726
NVKNCPVC +TIEK +GCNH+ECRCGRHICWVCLEYFGS DECY HL S+HM IV
Sbjct: 1681 NVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1734
BLAST of Sed0023847 vs. ExPASy TrEMBL
Match:
A0A5D3BD53 (ATP-dependent RNA helicase DEAH12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00060 PE=4 SV=1)
HSP 1 Score: 2921.0 bits (7571), Expect = 0.0e+00
Identity = 1428/1735 (82.31%), Postives = 1565/1735 (90.20%), Query Frame = 0
Query: 1 MKPSSSASLCPPDSSLRCNP----QYLPRS---SSRPHD-SPQPTSSNRANFVIDLVSEN 60
MK SSS + PPDSS RCN +LPRS S P S Q NRANF IDLV E+
Sbjct: 1 MKSSSSTASRPPDSSFRCNRPSNLHFLPRSPNASDLPSKFSAQQNCPNRANFAIDLVLEH 60
Query: 61 RALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMAGFWELRLDGLHDF 120
R LSK S++LLI+K SKPDNFI+PQAG V+A+L+FKQWV+ALE+M G WELRL+G HDF
Sbjct: 61 RTLSKCSVELLISKCISKPDNFIIPQAGSVSAFLFFKQWVSALESMVGLWELRLNGFHDF 120
Query: 121 TPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDLLVVEIRRISNTLR 180
TPILKPR +LPSD DELH RLR+LFA+RI+RLMDG+ V Q K DL++V+I RIS+ LR
Sbjct: 121 TPILKPRINLPSDVDELHGRLRNLFAERIKRLMDGDKVRHWQNKYDLVLVQIDRISDILR 180
Query: 181 RPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNKLELSDE-DVGVFR 240
RP R +L EKK+GL+VE+ESI RK+EEF AM +ILD VEG K+E SD D+G+F
Sbjct: 181 RPLRTDAAFELNEKKKGLLVEKESIMRKMEEFNSAMHHILDHVEGKKVETSDSLDMGIFT 240
Query: 241 FDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQ 300
FDG INWN+IHS +LRECRRLEDGLPMYSCR++ILRQI+ QQVMVL GETGSGKSTQLVQ
Sbjct: 241 FDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSGKSTQLVQ 300
Query: 301 FLADSGLSASKSIVCTQPRKISAISLAHRVREESRGC-YDGDLISCYPSFSSAQQFNSKI 360
FLADSGLS SKSIVCTQPRKISA+ LAHRVREESRGC YD D ISCYPSFSSAQQF SKI
Sbjct: 301 FLADSGLSGSKSIVCTQPRKISAVLLAHRVREESRGCYYDDDYISCYPSFSSAQQFKSKI 360
Query: 361 IYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA 420
IYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA
Sbjct: 361 IYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA 420
Query: 421 TANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHW 480
TANADQLS+YFF CGIF VPGR+FPVDI+YVPSSNE + GSC+V SYVTDV++MASEIHW
Sbjct: 421 TANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGTSGSCIVPSYVTDVVQMASEIHW 480
Query: 481 QEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQDHPGKRKVIFAT 540
QEKGGAILAFLTSQMEVEWACENFHAPGTV LAFHGKLSFDEQ RVFQDHPGKRKVIFAT
Sbjct: 481 QEKGGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFAT 540
Query: 541 NLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRC 600
NLAETSLTIPGVKYVIDPGWVKDSKFEP SGMNILKVCRTS+SSANQRAGRAGRTEPGRC
Sbjct: 541 NLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRC 600
Query: 601 YRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRN 660
YRLY +SEFELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDAPSAE VDMAIRN
Sbjct: 601 YRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRN 660
Query: 661 LVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNSSS 720
L+QLGAITLNNKVYELT EG NLVKLGIEPRLGKLILSCF+CRVRREGVVLAVLMTN+SS
Sbjct: 661 LIQLGAITLNNKVYELTNEGSNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASS 720
Query: 721 IFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAKTM 780
IFCRVG++EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL KERKN+WCWENSINAKTM
Sbjct: 721 IFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWENSINAKTM 780
Query: 781 RRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDR 840
RRCQDAILELERCLKQEL+IIIPSYWLWSPL+ +DHDRN+KKCIL SLAENVAMF+GYDR
Sbjct: 781 RRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVAMFTGYDR 840
Query: 841 LGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISPP 900
LGYEVAM G+H QLHPSCSLLIFSERPKWVVF EILSI NEYL+CVTA DVDAL T+SPP
Sbjct: 841 LGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFSEILSIVNEYLICVTAFDVDALLTLSPP 900
Query: 901 PLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVFRDDCIGVEVNIN 960
PLFDIS++EKHRLE R+LSGFG+T+LKRVCGKSNSNL+SLTS VRKVF D+CIG+EVNIN
Sbjct: 901 PLFDISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTSHVRKVFSDNCIGIEVNIN 960
Query: 961 PNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSSPVALMGAGAKIR 1020
NE+++FSR+ENM+EVCHF+N +LEYERKYL NECMEKCLYHGNGGS+PVAL+GAGAKIR
Sbjct: 961 QNELMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIR 1020
Query: 1021 HLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFGQEDDDKERGHRI 1080
HLELE+RYLTV F NVD++DDKE F SLE VSGT+C+IQKVPN G + DD+ RG+RI
Sbjct: 1021 HLELEKRYLTVYAFRLNVDSIDDKEFFTSLENFVSGTICSIQKVPNSGLDVDDRGRGYRI 1080
Query: 1081 TFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAKVFWPRRLSKGFA 1140
TFLTPDAAEKASK+D DSFCGSL+KIIP Q+ AGCDNK+F+FPPVKAKVFWPRRLSKGFA
Sbjct: 1081 TFLTPDAAEKASKIDCDSFCGSLMKIIPSQLTAGCDNKMFTFPPVKAKVFWPRRLSKGFA 1140
Query: 1141 VVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELSEADILDVLRNAT 1200
VVKCN+ DVGF++NDFS+LLIGGRFLR E S KYNDCVT+SGIDKELSEADIL+VLR AT
Sbjct: 1141 VVKCNINDVGFILNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADILNVLRTAT 1200
Query: 1201 DRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQVFPPQPKDFYLK 1260
DRKILD FL+REN VD+PP+ +CE++LLKEIS FMPK+N H KCC VQVFPPQPKDFY+K
Sbjct: 1201 DRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKSNPHVKCCRVQVFPPQPKDFYMK 1260
Query: 1261 AAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKHQLNS 1320
AAI+FDGRLHLEAAKALEFLEGKAL VC PWQKIKCQQLFHSTLSCTIPI+RVIKHQLNS
Sbjct: 1261 AAITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIPIYRVIKHQLNS 1320
Query: 1321 LIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRGKIIDHASATPTV 1380
L+ESFR+I GVEC+LSQNVNGSYRVKLSANATKTVAELRRP+EEL+RGKIID AS TPTV
Sbjct: 1321 LLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDDASLTPTV 1380
Query: 1381 LQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQKLIQSLQKLHESK 1440
+QHLTSRDGFDLINLLQRENGVYILFDRQRL LRIFGASE IA AEQKLIQSL+ +HESK
Sbjct: 1381 VQHLTSRDGFDLINLLQRENGVYILFDRQRLGLRIFGASENIAAAEQKLIQSLRLIHESK 1440
Query: 1441 QLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHILSVLGSKDLKLEV 1500
QLEI LRGKS P NLLK VVEKFGPDLNGLKQKFPG GFTLNTR HIL V GSKDLK EV
Sbjct: 1441 QLEIHLRGKSWPSNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEV 1500
Query: 1501 ETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCRQCLVEQFESAIK 1560
ETI++ELA M+ GGS +RPDDA+ C ICLC++EDD ELEACG FCRQCLVEQFESAIK
Sbjct: 1501 ETIVFELAAMS-GGSGERPDDADCCPICLCDIEDDRFELEACGDHFCRQCLVEQFESAIK 1560
Query: 1561 NQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSDGTYRFCPSPDCP 1620
NQG FP+CCAKQ C TPI+L DMR+LLSSEKLEELFRAS+GAF+ASSDG YRFCPSPDCP
Sbjct: 1561 NQGRFPVCCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPSPDCP 1620
Query: 1621 SVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDPDSSLNEWRKDKE 1680
SVY+VA P+M GEPFMC ACY+ETC RCHLEYHPFLSCEQYRVFKEDPDSSL EWRK KE
Sbjct: 1621 SVYRVARPNMPGEPFMCEACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWRKGKE 1680
Query: 1681 NVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLRSIHMAIV 1726
NVKNCPVC +TIEK +GCNH+ECRCGRHICWVCLEYFGS DECY HL S+HM IV
Sbjct: 1681 NVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1734
BLAST of Sed0023847 vs. ExPASy TrEMBL
Match:
A0A1S3C1B4 (ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495752 PE=4 SV=1)
HSP 1 Score: 2921.0 bits (7571), Expect = 0.0e+00
Identity = 1428/1735 (82.31%), Postives = 1565/1735 (90.20%), Query Frame = 0
Query: 1 MKPSSSASLCPPDSSLRCNP----QYLPRS---SSRPHD-SPQPTSSNRANFVIDLVSEN 60
MK SSS + PPDSS RCN +LPRS S P S Q NRANF IDLV E+
Sbjct: 1 MKSSSSTASRPPDSSFRCNRPSNLHFLPRSPNASDLPSKFSAQQNCPNRANFAIDLVLEH 60
Query: 61 RALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFKQWVAALEAMAGFWELRLDGLHDF 120
R LSK S++LLI+K SKPDNFI+PQAG V+A+L+FKQWV+ALE+M G WELRL+G HDF
Sbjct: 61 RTLSKCSVELLISKCISKPDNFIIPQAGSVSAFLFFKQWVSALESMVGLWELRLNGFHDF 120
Query: 121 TPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGELVTGLQKKRDLLVVEIRRISNTLR 180
TPILKPR +LPSD DELH RLR+LFA+RI+RLMDG+ V Q K DL++V+I RIS+ LR
Sbjct: 121 TPILKPRINLPSDVDELHGRLRNLFAERIKRLMDGDKVRHWQNKYDLVLVQIDRISDILR 180
Query: 181 RPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAMLYILDFVEGNKLELSDE-DVGVFR 240
RP R +L EKK+GL+VE+ESI RK+EEF AM +ILD VEG K+E SD D+G+F
Sbjct: 181 RPLRTDAAFELNEKKKGLLVEKESIMRKMEEFNSAMHHILDHVEGKKVETSDSLDMGIFT 240
Query: 241 FDGAINWNQIHSFVLRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQ 300
FDG INWN+IHS +LRECRRLEDGLPMYSCR++ILRQI+ QQVMVL GETGSGKSTQLVQ
Sbjct: 241 FDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSGKSTQLVQ 300
Query: 301 FLADSGLSASKSIVCTQPRKISAISLAHRVREESRGC-YDGDLISCYPSFSSAQQFNSKI 360
FLADSGLS SKSIVCTQPRKISA+ LAHRVREESRGC YD D ISCYPSFSSAQQF SKI
Sbjct: 301 FLADSGLSGSKSIVCTQPRKISAVLLAHRVREESRGCYYDDDYISCYPSFSSAQQFKSKI 360
Query: 361 IYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA 420
IYMTD+CLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA
Sbjct: 361 IYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSA 420
Query: 421 TANADQLSEYFFGCGIFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHW 480
TANADQLS+YFF CGIF VPGR+FPVDI+YVPSSNE + GSC+V SYVTDV++MASEIHW
Sbjct: 421 TANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGTSGSCIVPSYVTDVVQMASEIHW 480
Query: 481 QEKGGAILAFLTSQMEVEWACENFHAPGTVSLAFHGKLSFDEQLRVFQDHPGKRKVIFAT 540
QEKGGAILAFLTSQMEVEWACENFHAPGTV LAFHGKLSFDEQ RVFQDHPGKRKVIFAT
Sbjct: 481 QEKGGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFAT 540
Query: 541 NLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRC 600
NLAETSLTIPGVKYVIDPGWVKDSKFEP SGMNILKVCRTS+SSANQRAGRAGRTEPGRC
Sbjct: 541 NLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRC 600
Query: 601 YRLYAKSEFELMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRN 660
YRLY +SEFELMSP+HEPEIRKVHLGVA+L+ILALGVKNVDDFDFVDAPSAE VDMAIRN
Sbjct: 601 YRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRN 660
Query: 661 LVQLGAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNSSS 720
L+QLGAITLNNKVYELT EG NLVKLGIEPRLGKLILSCF+CRVRREGVVLAVLMTN+SS
Sbjct: 661 LIQLGAITLNNKVYELTNEGSNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASS 720
Query: 721 IFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAKTM 780
IFCRVG++EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEAL KERKN+WCWENSINAKTM
Sbjct: 721 IFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWENSINAKTM 780
Query: 781 RRCQDAILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDR 840
RRCQDAILELERCLKQEL+IIIPSYWLWSPL+ +DHDRN+KKCIL SLAENVAMF+GYDR
Sbjct: 781 RRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVAMFTGYDR 840
Query: 841 LGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISPP 900
LGYEVAM G+H QLHPSCSLLIFSERPKWVVF EILSI NEYL+CVTA DVDAL T+SPP
Sbjct: 841 LGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFSEILSIVNEYLICVTAFDVDALLTLSPP 900
Query: 901 PLFDISHLEKHRLEVRILSGFGRTILKRVCGKSNSNLISLTSRVRKVFRDDCIGVEVNIN 960
PLFDIS++EKHRLE R+LSGFG+T+LKRVCGKSNSNL+SLTS VRKVF D+CIG+EVNIN
Sbjct: 901 PLFDISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTSHVRKVFSDNCIGIEVNIN 960
Query: 961 PNEVLVFSRSENMEEVCHFLNGILEYERKYLRNECMEKCLYHGNGGSSPVALMGAGAKIR 1020
NE+++FSR+ENM+EVCHF+N +LEYERKYL NECMEKCLYHGNGGS+PVAL+GAGAKIR
Sbjct: 961 QNELMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIR 1020
Query: 1021 HLELERRYLTVDVFHSNVDAMDDKEIFISLEKSVSGTVCAIQKVPNFGQEDDDKERGHRI 1080
HLELE+RYLTV F NVD++DDKE F SLE VSGT+C+IQKVPN G + DD+ RG+RI
Sbjct: 1021 HLELEKRYLTVYAFRLNVDSIDDKEFFTSLENFVSGTICSIQKVPNSGLDVDDRGRGYRI 1080
Query: 1081 TFLTPDAAEKASKLDGDSFCGSLVKIIPLQINAGCDNKLFSFPPVKAKVFWPRRLSKGFA 1140
TFLTPDAAEKASK+D DSFCGSL+KIIP Q+ AGCDNK+F+FPPVKAKVFWPRRLSKGFA
Sbjct: 1081 TFLTPDAAEKASKIDCDSFCGSLMKIIPSQLTAGCDNKMFTFPPVKAKVFWPRRLSKGFA 1140
Query: 1141 VVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTKYNDCVTLSGIDKELSEADILDVLRNAT 1200
VVKCN+ DVGF++NDFS+LLIGGRFLR E S KYNDCVT+SGIDKELSEADIL+VLR AT
Sbjct: 1141 VVKCNINDVGFILNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADILNVLRTAT 1200
Query: 1201 DRKILDFFLIRENPVDDPPLIACEDALLKEISFFMPKTNLHAKCCHVQVFPPQPKDFYLK 1260
DRKILD FL+REN VD+PP+ +CE++LLKEIS FMPK+N H KCC VQVFPPQPKDFY+K
Sbjct: 1201 DRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKSNPHVKCCRVQVFPPQPKDFYMK 1260
Query: 1261 AAISFDGRLHLEAAKALEFLEGKALSVCFPWQKIKCQQLFHSTLSCTIPIFRVIKHQLNS 1320
AAI+FDGRLHLEAAKALEFLEGKAL VC PWQKIKCQQLFHSTLSCTIPI+RVIKHQLNS
Sbjct: 1261 AAITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIPIYRVIKHQLNS 1320
Query: 1321 LIESFRKIAGVECSLSQNVNGSYRVKLSANATKTVAELRRPMEELMRGKIIDHASATPTV 1380
L+ESFR+I GVEC+LSQNVNGSYRVKLSANATKTVAELRRP+EEL+RGKIID AS TPTV
Sbjct: 1321 LLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDDASLTPTV 1380
Query: 1381 LQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKIAVAEQKLIQSLQKLHESK 1440
+QHLTSRDGFDLINLLQRENGVYILFDRQRL LRIFGASE IA AEQKLIQSL+ +HESK
Sbjct: 1381 VQHLTSRDGFDLINLLQRENGVYILFDRQRLGLRIFGASENIAAAEQKLIQSLRLIHESK 1440
Query: 1441 QLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQKFPGVGFTLNTRHHILSVLGSKDLKLEV 1500
QLEI LRGKS P NLLK VVEKFGPDLNGLKQKFPG GFTLNTR HIL V GSKDLK EV
Sbjct: 1441 QLEIHLRGKSWPSNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEV 1500
Query: 1501 ETIIYELAKMTGGGSAKRPDDAEACSICLCELEDDMLELEACGHRFCRQCLVEQFESAIK 1560
ETI++ELA M+ GGS +RPDDA+ C ICLC++EDD ELEACG FCRQCLVEQFESAIK
Sbjct: 1501 ETIVFELAAMS-GGSGERPDDADCCPICLCDIEDDRFELEACGDHFCRQCLVEQFESAIK 1560
Query: 1561 NQGSFPICCAKQTCLTPILLTDMRSLLSSEKLEELFRASMGAFVASSDGTYRFCPSPDCP 1620
NQG FP+CCAKQ C TPI+L DMR+LLSSEKLEELFRAS+GAF+ASSDG YRFCPSPDCP
Sbjct: 1561 NQGRFPVCCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPSPDCP 1620
Query: 1621 SVYQVASPDMSGEPFMCGACYTETCTRCHLEYHPFLSCEQYRVFKEDPDSSLNEWRKDKE 1680
SVY+VA P+M GEPFMC ACY+ETC RCHLEYHPFLSCEQYRVFKEDPDSSL EWRK KE
Sbjct: 1621 SVYRVARPNMPGEPFMCEACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWRKGKE 1680
Query: 1681 NVKNCPVCTHTIEKIDGCNHIECRCGRHICWVCLEYFGSGDECYGHLRSIHMAIV 1726
NVKNCPVC +TIEK +GCNH+ECRCGRHICWVCLEYFGS DECY HL S+HM IV
Sbjct: 1681 NVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1734
BLAST of Sed0023847 vs. TAIR 10
Match:
AT5G10370.1 (helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related )
HSP 1 Score: 1855.9 bits (4806), Expect = 0.0e+00
Identity = 923/1708 (54.04%), Postives = 1235/1708 (72.31%), Query Frame = 0
Query: 36 PTSSNRANFVIDLVSENRALS---------KFSLQLLIAKIHSKPDNFIVPQAGPVAAYL 95
P + R NF++ L+ A S K ++ L ++ VPQ G +A
Sbjct: 76 PVTRARPNFIVQLLHPAAANSDTKLCFSTKKQEIESLALLCEIPEESIHVPQFGCIAGSF 135
Query: 96 YFKQWVAALEAMAGFWELRLDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMD 155
F+QWV A A+ W+ RL G H+F P L P +PSD +EL RLR LF+ I LM+
Sbjct: 136 SFRQWVDARSAVVALWDYRLQGKHEFVPELIPNVIVPSDMNELKDRLRDLFSSHILSLME 195
Query: 156 -GELVTGLQKKRDLLVVEIRR-ISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEF 215
GE G++K R + + R+ +S + +R + ++ EKK+ + E + + +LEEF
Sbjct: 196 NGE---GVKKVRLEIEEKSRQVVSFSSKRGLK----FEVFEKKKAIEAERDLVVNRLEEF 255
Query: 216 KRAMLYILDFV---EGNKLELSDE---DVGVFRFDGAINWNQIHSFVLRECRRLEDGLPM 275
AM IL ++ +G + +L DE DV VF +GA +W +IH + RECRRLEDGLP+
Sbjct: 256 NNAMKSILRYLIGQDGYEFDLDDEEEGDVAVFCLEGAYDWRRIHCLIRRECRRLEDGLPI 315
Query: 276 YSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAISLA 335
Y+ RRQIL++I +Q+MVL GETGSGKSTQLVQFLADSG++AS+SIVCTQPRKI+A++LA
Sbjct: 316 YAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLA 375
Query: 336 HRVREESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDE 395
RVREES GCY+ + +SC P+FSS ++ +SK++YMTDNCLLQHYM D+ LS +SC+IIDE
Sbjct: 376 DRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDE 435
Query: 396 AHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRNFPVDI 455
AHERSLNTDLLLALLK LL RIDL L+IMSATA+A QLS+YFF CGI V GRNFPV+I
Sbjct: 436 AHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEI 495
Query: 456 RYVPSSNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQMEVEWACENFHAPG 515
Y PS E++ +ASYV DV++MA EIH EK G ILAFLTSQ EVEWACE F P
Sbjct: 496 VYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFITPS 555
Query: 516 TVSLAFHGKLSFDEQLRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEP 575
++L HGKLSF+EQ RVFQ+HPG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EP
Sbjct: 556 AIALPLHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEP 615
Query: 576 RSGMNILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVA 635
R+GM+ILKVCR S+SSA QRAGRAGRTEPGRCYRLY+K++F+ M+ + EPEIR+VHLGVA
Sbjct: 616 RTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVA 675
Query: 636 LLKILALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGI 695
LL++LALGV N+ +F+FVDAP E + MA++NLVQLGA+ N V+ELT+EG LVKLG+
Sbjct: 676 LLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGL 735
Query: 696 EPRLGKLILSCFNCRVRREGVVLAVLMTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDL 755
EP+LGKLIL CF R+ +EG+VLA +M N+SSIFCRVG +DK+K+D KVQFC+ +GDL
Sbjct: 736 EPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDL 795
Query: 756 FTLLSVYKQYEALSKERKNKWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLW 815
FTLLSVYK++ +L +ER+NKWCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W
Sbjct: 796 FTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVW 855
Query: 816 SPLQRTDHDRNLKKCILASLAENVAMFSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPK 875
+P + T HD++LK ILASLAENVAM++GY++LGYEVA+ G+ QLHPSCSLL F ++P
Sbjct: 856 NPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPS 915
Query: 876 WVVFGEILSISNEYLVCVTAIDVDALSTISPPPLFDISHLEKHRLEVRILSGFGRTILKR 935
WVVFGE+LSI ++YLVCVTA D +AL + PPP FD+S +++ RL ++ + G T+LKR
Sbjct: 916 WVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRLRIKKVVGCSSTVLKR 975
Query: 936 VCGKSNSNLISLTSRVRKVFRDDCIGVEVNINPNEVLVFSRSENMEEVCHFLNGILEYER 995
CGKSN +L+S+ SR R + D+ IG++V+++ NE+ +++ +ME+V +N LE E+
Sbjct: 976 FCGKSNRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYAPPLDMEKVSALVNDALECEK 1035
Query: 996 KYLRNECMEKCLYHGNGGSSPVALMGAGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFI 1055
K++ NEC+EK LYHG G P+AL G+GA+I+HLE+++R+LTVDV + D +DD+E+
Sbjct: 1036 KWMHNECLEKYLYHGR-GQVPIALFGSGAQIKHLEVDQRFLTVDVLYYGDDVVDDRELLT 1095
Query: 1056 SLEKSVSGTVCAIQKVPNFGQEDDDKERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIP 1115
LEK + G++C+I K Q+ D+KE+ RITFLTP++A KA+++ F GS++K+ P
Sbjct: 1096 FLEKKIDGSICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFYFKGSVLKLFP 1155
Query: 1116 LQINAGCDNKLFSFPPVKAKVFWPRRLSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRS 1175
G K+ F V AK+ WPRR S G +KC D+ ++ D S+L IG ++
Sbjct: 1156 SLSTGGGIFKMPYFSSVTAKIRWPRRESSGRGCLKCPSGDIHRILGDISSLEIGTNYVHI 1215
Query: 1176 ELSTKYNDCVTLSGIDKELSEADILDVLRNATDRKILDFFLIREN-PVDDPPLIACEDAL 1235
+ + ND + +SG+ +LSEA++LDVL T R+ L+FF+ R+ V P ACE+ L
Sbjct: 1216 QRDQQSNDSILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEEL 1275
Query: 1236 LKEISFFMPKTNLHAKCCHVQVFPPQPKDFYLKAAISFDGRLHLEAAKALEFLEGKALSV 1295
K I M N C VQVF P+ +++++A I FDGRLH EAAKAL+ L G+ L
Sbjct: 1276 HKRIFARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHFEAAKALQELNGEVLPG 1335
Query: 1296 CFPWQKIKCQQLFHSTLSCTIPIFRVIKHQLNSLIESFRKIAGVECSLSQNVNGSYRVKL 1355
C PWQKIKC+QLF S++ C+ I+ +K QLN L+ F + G EC L NG+YRVK+
Sbjct: 1336 CLPWQKIKCEQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKI 1395
Query: 1356 SANATKTVAELRRPMEELMRGKIIDHASATPTVLQHLTSRDGFDLINLLQRENGVYILFD 1415
+A AT+ VAE+RR +EEL+RG+ I+H T VLQHL SRDG +L+ +Q+E YIL D
Sbjct: 1396 TAYATRPVAEMRRELEELLRGRPINHPGFTRRVLQHLMSRDGINLMRKIQQETETYILLD 1455
Query: 1416 RQRLSLRIFGASEKIAVAEQKLIQSLQKLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDL 1475
R L++RI G SEKIA AEQ+LIQ+L HESKQLEI LRG P+L+K VV++FGP+L
Sbjct: 1456 RHNLTVRICGTSEKIAKAEQELIQALMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPEL 1515
Query: 1476 NGLKQKFPGVGFTLNTRHHILSVLGSKDLKLEVETIIYELAKMTGGGSAKRPDDAEA-CS 1535
G+K+K GV LNTR+H++ V GSK+++ EV+ ++ ELA+ ++PD+ E C
Sbjct: 1516 QGIKEKVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAR-EKSALGEKPDEIEVECP 1575
Query: 1536 ICLCELEDDMLELEACGHRFCRQCLVEQFESAIKNQGSFPICCAKQTCLTPILLTDMRSL 1595
ICL E+ DD LE C H FC+ CL+EQFE++++N +FPI C+ C PI+L DMR+L
Sbjct: 1576 ICLSEV-DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVLADMRAL 1635
Query: 1596 LSSEKLEELFRASMGAFVASSDGTYRFCPSPDCPSVYQVASPDMSGEPFMCGACYTETCT 1655
LS EKL+ELF AS+ +FV SSDG +RFC +PDCPSVY+VA P SGEPF+CGAC++E CT
Sbjct: 1636 LSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFICGACHSEICT 1695
Query: 1656 RCHLEYHPFLSCEQYRVFKEDPDSSLNEWRKDKENVKNCPVCTHTIEKIDGCNHIECRCG 1715
RCHLEYHP ++CE+Y+ FKE+PD SL +W K K NVK CP+C TIEK DGCNH++CRCG
Sbjct: 1696 RCHLEYHPLITCERYKKFKENPDLSLKDWAKGK-NVKECPICKSTIEKTDGCNHMKCRCG 1755
Query: 1716 RHICWVCLEYFGSGDECYGHLRSIHMAI 1725
+HICW CL+ F + CY HLR+IH I
Sbjct: 1756 KHICWTCLDVFTQEEPCYAHLRTIHGGI 1771
BLAST of Sed0023847 vs. TAIR 10
Match:
AT4G01020.1 (helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related )
HSP 1 Score: 1852.4 bits (4797), Expect = 0.0e+00
Identity = 912/1703 (53.55%), Postives = 1230/1703 (72.23%), Query Frame = 0
Query: 36 PTSSNRANFVIDLV------SENRALSKFSLQLLIAKIHSKPDNFIVPQAGPVAAYLYFK 95
P + R NF++ L+ S+ + K ++ + ++ VPQ G +AA F+
Sbjct: 76 PVTRARPNFIVQLLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVPQFGCIAASFSFR 135
Query: 96 QWVAALEAMAGFWELRLDGLHDFTPILKPRFHLPSDADELHHRLRSLFADRIRRLMDGEL 155
QWV A A+ W+ RL G HDF P L P +PSD DEL RLR LF+ + LM+
Sbjct: 136 QWVDARSAVVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENG- 195
Query: 156 VTGLQKKRDLLVVEIRRISNTLRRPTRILTQLDLKEKKEGLIVEEESITRKLEEFKRAML 215
G++K R + + R++++ ++ + ++ EKK+ L E + + +L+EF AM
Sbjct: 196 -QGVKKVRMEIDDKSRQVASF---SSKRGLKFEVFEKKKALEAERDLVVNRLDEFNNAMK 255
Query: 216 YILDFV---EGNKLEL---SDEDVGVFRFDGAINWNQIHSFVLRECRRLEDGLPMYSCRR 275
IL ++ +G + ++ DEDV VF +GA +W +IH +LRECRRLEDGLP+Y+ RR
Sbjct: 256 SILRYLIGQDGYEFDVDDEDDEDVAVFSLEGAYDWRRIHYLILRECRRLEDGLPIYAYRR 315
Query: 276 QILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAISLAHRVRE 335
QIL++I +Q+MVL GETGSGKSTQLVQFLADSG++AS+SIVCTQPRKI+A++L RVRE
Sbjct: 316 QILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVRE 375
Query: 336 ESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSCIIIDEAHERS 395
ES GCY+ + +SC P+FSS ++ +SK++YMTDNCLLQHYM D+ LS +SC+IIDEAHERS
Sbjct: 376 ESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERS 435
Query: 396 LNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRNFPVDIRYVPS 455
LNTDLLLALL+ LL RIDL L+IMSATA+A+QLS+Y F CGI HV GRNFPV+I Y PS
Sbjct: 436 LNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPS 495
Query: 456 SNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVSLA 515
E++ +ASY DV++MA EIH EK G ILAFLTSQ EVEWACE F AP ++L
Sbjct: 496 GTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALP 555
Query: 516 FHGKLSFDEQLRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPRSGMN 575
HGKLSF+EQ VFQ++PG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EPR+GM+
Sbjct: 556 LHGKLSFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMS 615
Query: 576 ILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAKSEFELMSPHHEPEIRKVHLGVALLKIL 635
ILKVC+ S+SSA QRAGRAGRTEPGRCYRLY+K++F+ M+ + EPEIR+VHLGVALL++L
Sbjct: 616 ILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRML 675
Query: 636 ALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLGAITLNNKVYELTKEGRNLVKLGIEPRLG 695
ALG+ N+ F+FVDAP E + MAI+NLVQLGA+ N V ELT+EG LVKLG+EP+LG
Sbjct: 676 ALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLG 735
Query: 696 KLILSCFNCRVRREGVVLAVLMTNSSSIFCRVGKIEDKLKSDCQKVQFCHPDGDLFTLLS 755
KLIL CF R+ +EG+VLA +M N+SSIFCRVG +DK+K+D KVQFC+ +GDLFTLLS
Sbjct: 736 KLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLS 795
Query: 756 VYKQYEALSKERKNKWCWENSINAKTMRRCQDAILELERCLKQELNIIIPSYWLWSPLQR 815
VYK++ +L ++R+NKWCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W+P +
Sbjct: 796 VYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEG 855
Query: 816 TDHDRNLKKCILASLAENVAMFSGYDRLGYEVAMNGRHAQLHPSCSLLIFSERPKWVVFG 875
T HD+ LK ILASLAENVAM++GYD+LGYEVA+ + QLHPSCSLL F ++P WVVFG
Sbjct: 856 TKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFG 915
Query: 876 EILSISNEYLVCVTAIDVDALSTISPPPLFDISHLEKHRLEVRILSGFGRTILKRVCGKS 935
E+LSI ++YLVCVTA D +AL + PPP FD S +++ RL V+ + G T+LKR CGKS
Sbjct: 916 ELLSIVDQYLVCVTAFDFEALYMLDPPPPFDASQMDERRLRVKKVVGCSSTVLKRFCGKS 975
Query: 936 NSNLISLTSRVRKVFRDDCIGVEVNINPNEVLVFSRSENMEEVCHFLNGILEYERKYLRN 995
N +L+S+ SR R + D+ IG++V+++ NE+ +++ +ME+V +N LE E+K++RN
Sbjct: 976 NRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYASPLDMEKVSALVNDALECEKKWMRN 1035
Query: 996 ECMEKCLYHGNGGSSPVALMGAGAKIRHLELERRYLTVDVFHSNVDAMDDKEIFISLEKS 1055
EC+EK L+HG G P+AL G+GA+I+HLE+++R+LTVDV + D +DD+E+ LEK
Sbjct: 1036 ECLEKYLFHGR-GQIPIALFGSGAQIKHLEVDQRFLTVDVHYYGDDVVDDRELLTFLEKK 1095
Query: 1056 VSGTVCAIQKVPNFGQEDDDKERGHRITFLTPDAAEKASKLDGDSFCGSLVKIIPLQINA 1115
+ G +C+I K Q+ D+KE+ RITFLTP++A KA+++ F GS++K+ P
Sbjct: 1096 IDGCICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATEIQKFDFKGSVLKVFPSLSTG 1155
Query: 1116 GCDNKLFSFPPVKAKVFWPRRLSKGFAVVKCNVFDVGFLVNDFSNLLIGGRFLRSELSTK 1175
G K+ F V AK+ WPR+ S G +KC D+ ++ D ++L IG ++ +
Sbjct: 1156 GGIFKMPYFSSVTAKIRWPRKESSGRGCLKCPSGDIHSILGDITSLEIGTNYVHIQRDQL 1215
Query: 1176 YNDCVTLSGIDKELSEADILDVLRNATDRKILDFFLIREN-PVDDPPLIACEDALLKEIS 1235
ND + +SG+ +LSEA++LDVL T R+ L+FF+ R+ V P ACE+ L K I
Sbjct: 1216 SNDSILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIF 1275
Query: 1236 FFMPKTNLHAKCCHVQVFPPQPKDFYLKAAISFDGRLHLEAAKALEFLEGKALSVCFPWQ 1295
M N C VQVF P+ +++++A I FDGRLHLEAAKAL+ L G+ L C PWQ
Sbjct: 1276 ARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHLEAAKALQELNGEVLPGCLPWQ 1335
Query: 1296 KIKCQQLFHSTLSCTIPIFRVIKHQLNSLIESFRKIAGVECSLSQNVNGSYRVKLSANAT 1355
KIKC+QLF S++ C+ I+ +K QLN L+ F + G EC L NG+YRVK++A AT
Sbjct: 1336 KIKCEQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYAT 1395
Query: 1356 KTVAELRRPMEELMRGKIIDHASATPTVLQHLTSRDGFDLINLLQRENGVYILFDRQRLS 1415
+ VAE+RR +EEL+RGK I+H TP V+QHL SRDG +L+ +Q+E YIL DR L+
Sbjct: 1396 RPVAEMRRELEELLRGKPINHPGFTPRVVQHLMSRDGINLMRKIQQETETYILLDRHNLT 1455
Query: 1416 LRIFGASEKIAVAEQKLIQSLQKLHESKQLEIQLRGKSRPPNLLKTVVEKFGPDLNGLKQ 1475
+RI G SEKIA AEQ+L+QSL HESKQLEI LRG P+L+K VV++FGP+L G+K+
Sbjct: 1456 VRICGTSEKIAKAEQELVQSLMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKE 1515
Query: 1476 KFPGVGFTLNTRHHILSVLGSKDLKLEVETIIYELAKMTGGGSAKRPDDAE-ACSICLCE 1535
K GV LNTR+H++ V GSK+++ EV+ ++ ELA+ ++PD+ E C ICL E
Sbjct: 1516 KVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAR-EKSALGEKPDEIELECPICLSE 1575
Query: 1536 LEDDMLELEACGHRFCRQCLVEQFESAIKNQGSFPICCAKQTCLTPILLTDMRSLLSSEK 1595
+ DD LE C H FC+ CL+EQFE++++N +FPI C+ C PI++ DMR+LLS EK
Sbjct: 1576 V-DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRALLSQEK 1635
Query: 1596 LEELFRASMGAFVASSDGTYRFCPSPDCPSVYQVASPDMSGEPFMCGACYTETCTRCHLE 1655
L+EL AS+ AFV SSDG RFC +PDCPS+Y+VA P SGEPF+CGAC++ETCTRCHLE
Sbjct: 1636 LDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHSETCTRCHLE 1695
Query: 1656 YHPFLSCEQYRVFKEDPDSSLNEWRKDKENVKNCPVCTHTIEKIDGCNHIECRCGRHICW 1715
YHP ++CE+Y+ FKE+PD SL +W K K+ VK CP+C TIEK DGCNH++CRCG+HICW
Sbjct: 1696 YHPLITCERYKKFKENPDLSLKDWAKGKD-VKECPICKSTIEKTDGCNHLQCRCGKHICW 1755
Query: 1716 VCLEYFGSGDECYGHLRSIHMAI 1725
CL+ F + CY HLR+IH I
Sbjct: 1756 TCLDVFTQAEPCYAHLRTIHGGI 1768
BLAST of Sed0023847 vs. TAIR 10
Match:
AT3G26560.1 (ATP-dependent RNA helicase, putative )
HSP 1 Score: 406.4 bits (1043), Expect = 1.2e-112
Identity = 238/667 (35.68%), Postives = 383/667 (57.42%), Query Frame = 0
Query: 254 DGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKIS 313
+ LP+Y ++++++ + QV+V+ GETGSGK+TQ+ Q+LA++G + I CTQPR+++
Sbjct: 513 ESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVA 572
Query: 314 AISLAHRVREESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSC 373
A+S+A RV EE GC G+ + F ++ I YMTD LL+ + D+ LS S
Sbjct: 573 AMSVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSV 632
Query: 374 IIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRN 433
I++DEAHER+++TD+L LLK L+ R+DL LI+ SAT +A++ S YFF C IF +PGR
Sbjct: 633 IMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRT 692
Query: 434 FPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQMEVEWACEN 493
FPV+I Y D Y+ + +IH E G IL FLT Q E++ AC++
Sbjct: 693 FPVEILYTKQPETD---------YLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQS 752
Query: 494 FH---------APGTVSLAFHGKLSFDEQLRVFQ-DHPGKRKVIFATNLAETSLTIPGVK 553
+ P + L + L + Q R+F PGKRKV+ ATN+AE SLTI G+
Sbjct: 753 LYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIY 812
Query: 554 YVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAKSEF-ELM 613
YV+DPG+ K + + P+ G+ L + S++SA QRAGRAGRT PG+CYRLY +S + M
Sbjct: 813 YVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM 872
Query: 614 SPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLGAITLNNK 673
P PEI++++LG+ L + A+G+ ++ FDF+D P + + A+ L LGA+ ++
Sbjct: 873 PPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGAL---DE 932
Query: 674 VYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNSSSIFCRVGKIEDKL 733
LTK GR + + +EP L K++L+ + E ++ + M + +IF R E +
Sbjct: 933 EGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDE-ILTMIAMIQTGNIFYR--PREKQA 992
Query: 734 KSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAKTMRRCQDAILELER 793
++D ++ +F P+GD TLL+VY+ ++A K WC+EN I ++++RR QD
Sbjct: 993 QADQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQD------- 1052
Query: 794 CLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDRLGYEVAMNGRHA 853
++++L I+ Y L + + ++K I A + A + GY + +
Sbjct: 1053 -VRKQLLSIMDKYKL-DVVTAGKNFTKIRKAITAGFFFHGARKDPQE--GYRTLVENQPV 1112
Query: 854 QLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISPP--PLFDISHLEK 908
+HPS +L F +P WV++ +++ + EY+ VT ID L ++P + D + + K
Sbjct: 1113 YIHPSSAL--FQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSK 1148
BLAST of Sed0023847 vs. TAIR 10
Match:
AT5G13010.1 (RNA helicase family protein )
HSP 1 Score: 363.2 bits (931), Expect = 1.1e-99
Identity = 235/654 (35.93%), Postives = 355/654 (54.28%), Query Frame = 0
Query: 256 LPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAI 315
LP++S R ++L+ IR QV+V+ GETGSGK+TQL Q+L + G + + + CTQPR+++A+
Sbjct: 558 LPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAM 617
Query: 316 SLAHRVREESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMNDKKLSDVSCII 375
S+A RV EE GD I F N+ I YMTD LL+ + D L ++
Sbjct: 618 SVAKRVSEEME-TELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVV 677
Query: 376 IDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCGIFHVPGRNFP 435
+DEAHERSLNTD+L +LK ++ R D LI+ SAT NA + S +F IF++PGR FP
Sbjct: 678 MDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFP 737
Query: 436 VDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQMEVEWAC---- 495
V+I Y + ED YV ++ A IH G IL F+T Q E+E AC
Sbjct: 738 VNILYSKTPCED---------YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLK 797
Query: 496 ---------ENFHAPGTVSLAFHGKLSFDEQLRVFQ-DHPGKRKVIFATNLAETSLTIPG 555
+ + L + +L D Q ++FQ G RK I ATN+AETSLT+ G
Sbjct: 798 ERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDG 857
Query: 556 VKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRCYRLYAKSEF-E 615
+ YVID G+ K F PR GM+ L+V SR++++QRAGRAGRT PG CYRLY +S +
Sbjct: 858 IYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLN 917
Query: 616 LMSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRNLVQLGAITLN 675
M P PEI++ +LG +L + +L + N+ DFDF+D P E + ++ L LGA+
Sbjct: 918 EMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGAL--- 977
Query: 676 NKVYELTKEGRNLVKLGIEPRLGKLIL--SCFNCRVRREGVVLAVLMTNSSSIFCRVGKI 735
N V LT G +V+ ++P L K++L +C + V+ V M + S+F R
Sbjct: 978 NNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDC---IDEVLTIVSMLSVPSVFFR--PK 1037
Query: 736 EDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALSKERKNKWCWENSINAKTMRRCQDA-- 795
E +SD + +F P+ D TLL+VY+Q++ + + WC ++ + K +R+ ++
Sbjct: 1038 ERAEESDAAREKFFVPESDHLTLLNVYQQWK--EHDYRGDWCNDHYLQVKGLRKAREVRS 1097
Query: 796 -ILELERCLKQELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDRLGYEV 855
+L++ + LK EL P + + ++K I ++ N A G Y
Sbjct: 1098 QLLDILKQLKIELRSCGPDWDI------------VRKAICSAYFHNSARLKGVGE--YVN 1157
Query: 856 AMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISP 890
G LHPS +L P +VV+ E++ + EY+ C T+++ L+ + P
Sbjct: 1158 CRTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELGP 1177
BLAST of Sed0023847 vs. TAIR 10
Match:
AT1G32490.1 (RNA helicase family protein )
HSP 1 Score: 359.4 bits (921), Expect = 1.6e-98
Identity = 226/657 (34.40%), Postives = 363/657 (55.25%), Query Frame = 0
Query: 246 LRECRRLEDGLPMYSCRRQILRQIRSQQVMVLEGETGSGKSTQLVQFLADSGLSASKSIV 305
L E + + LP+Y+ R Q+L+ + QV+V+ G+TGSGK+TQ+ Q+L ++G + +
Sbjct: 394 LEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVG 453
Query: 306 CTQPRKISAISLAHRVREESRGCYDGDLISCYPSFSSAQQFNSKIIYMTDNCLLQHYMND 365
CTQPR+++A+S+A RV +E G G + F + + YMTD LL+ + +
Sbjct: 454 CTQPRRVAAMSVAARVAQE-MGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGE 513
Query: 366 KKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSEYFFGCG 425
L+ S +I+DEAHER+L+TD+L L+K + R DL L+I SAT +A++ S+YF
Sbjct: 514 PDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAP 573
Query: 426 IFHVPGRNFPVDIRYVPSSNEDSYGSCVVASYVTDVIRMASEIHWQEKGGAILAFLTSQM 485
IF PGR +PV+I Y S+ E Y + + +T IH +E G IL F T Q
Sbjct: 574 IFSFPGRRYPVEINYT-SAPEADYMDAAIVTILT--------IHVREPLGDILVFFTGQE 633
Query: 486 EVEWACE----NFHAPGT-----VSLAFHGKLSFDEQLRVFQDHP-GKRKVIFATNLAET 545
E+E A E GT + + L + Q ++F+ P G RKV+ ATN+AET
Sbjct: 634 EIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAET 693
Query: 546 SLTIPGVKYVIDPGWVKDSKFEPRSGMNILKVCRTSRSSANQRAGRAGRTEPGRCYRLYA 605
SLTI G+KYV+DPG+ K + PR+GM L + S++SA QRAGRAGRT PG+CYRLY
Sbjct: 694 SLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYT 753
Query: 606 KSEFEL-MSPHHEPEIRKVHLGVALLKILALGVKNVDDFDFVDAPSAEGVDMAIRNLVQL 665
+ + + PE+++ +L +L + +LG+ ++ +FDF+D P AE + ++ L L
Sbjct: 754 AFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFAL 813
Query: 666 GAITLNNKVYELTKEGRNLVKLGIEPRLGKLILSCFNCRVRREGVVLAVLMTNSSSIFCR 725
GA+ NK+ ELTK GR + + ++P L K+I+ + E + +A +++ SIF R
Sbjct: 814 GAL---NKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYR 873
Query: 726 VGKIEDKLKSDCQKVQFCHPD-GDLFTLLSVYKQYEALSKERKNKWCWENSINAKTMRRC 785
+ ++ +D ++ F + GD LL VY ++ +WC+EN I ++M+R
Sbjct: 874 --PKDKQVHADNARMNFHTGNVGDHIALLKVYSSWK--ETNFSTQWCYENYIQVRSMKRA 933
Query: 786 QDAILELERCLKQ-ELNIIIPSYWLWSPLQRTDHDRNLKKCILASLAENVAMFSGYDRLG 845
+D +LE L++ E++I S L D +++K I+A + A
Sbjct: 934 RDIRDQLEGLLERVEIDIS-------SNLNELD---SVRKSIVAGFFPHTAKLQ--KNGS 993
Query: 846 YEVAMNGRHAQLHPSCSLLIFSERPKWVVFGEILSISNEYLVCVTAIDVDALSTISP 890
Y + + +HP+ L P+WVV+ E++ S EY+ VT + + L ++P
Sbjct: 994 YRTVKHPQTVHIHPNSGL--SQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAP 1019
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022943236.1 | 0.0e+00 | 84.46 | ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita moschata] | [more] |
XP_023531305.1 | 0.0e+00 | 84.43 | ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita pepo subsp. pep... | [more] |
KAG6600671.1 | 0.0e+00 | 84.33 | ATP-dependent RNA helicase DEAH12, chloroplastic, partial [Cucurbita argyrosperm... | [more] |
KAG7031310.1 | 0.0e+00 | 84.23 | ATP-dependent RNA helicase DEAH12, chloroplastic [Cucurbita argyrosperma subsp. ... | [more] |
XP_022969963.1 | 0.0e+00 | 84.14 | ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
F4KGU4 | 0.0e+00 | 54.04 | ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702... | [more] |
P0CE10 | 0.0e+00 | 53.55 | ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702... | [more] |
Q38953 | 1.6e-111 | 35.68 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi... | [more] |
Q09530 | 2.5e-107 | 37.09 | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabd... | [more] |
Q54F05 | 3.9e-105 | 35.02 | ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FR66 | 0.0e+00 | 84.46 | ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucurbita moschata OX=3... | [more] |
A0A6J1I2G6 | 0.0e+00 | 84.14 | ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucurbita maxima OX=366... | [more] |
A0A5A7TQC6 | 0.0e+00 | 82.42 | ATP-dependent RNA helicase DEAH12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BD53 | 0.0e+00 | 82.31 | ATP-dependent RNA helicase DEAH12 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A1S3C1B4 | 0.0e+00 | 82.31 | ATP-dependent RNA helicase DEAH12, chloroplastic-like OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT5G10370.1 | 0.0e+00 | 54.04 | helicase domain-containing protein / IBR domain-containing protein / zinc finger... | [more] |
AT4G01020.1 | 0.0e+00 | 53.55 | helicase domain-containing protein / IBR domain-containing protein / zinc finger... | [more] |
AT3G26560.1 | 1.2e-112 | 35.68 | ATP-dependent RNA helicase, putative | [more] |
AT5G13010.1 | 1.1e-99 | 35.93 | RNA helicase family protein | [more] |
AT1G32490.1 | 1.6e-98 | 34.40 | RNA helicase family protein | [more] |