Sed0023844 (gene) Chayote v1

Overview


Name	Sed0023844
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG04: 34166081 .. 34167703 (-)
RNA-Seq Expression	Sed0023844
Synteny	Sed0023844

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACCATTGATTTCATTCCCCCGTCTTCCACTTGGGCGGCTGATCTTGTCCCTCCTCTGTCCCCTCTGTTGCTACCATTTGTACCGACAATTCCCCATTTCCCCTCTTCTCATGTATAAAACTTCCCCAAACAGATTCCTATCCCCAAACCAAACACACCCTCCTAAACCCAAAACCCACGAATGGCAATGGATTCCAAGCTCAACGATCTGAACCTCGAAGCCACGGAGCTCCGCCTCGGCCTCCCCGGAACCCCCGCCCCAAACAAGAGGAATCTGCACAACCAATCTGCTCCTCCCCCCAAGTATGTACCCATTTTTCATCTCTCTTGGCTTTATGTTTGTGATTTTCATTCTAAATGGGTGTGGGTTTTGTAGGGCTCAGGTTGTGGGGTGGCCGCCGGTTAGATCTTTTAGGAAAAACACTCTTCAGCCCAAGAAGACGGCGGCGGCGGCGGCGGAGGGTGGTGGGGTTTATGTGAAAGTCAGTATGGATGGAGCGCCTTATTTGAGGAAGGTTGATTTGGGTATGTACAAAGGCTACCCTGAACTCCTCAAGGCTTTGGAGGACATGTTTGAGTTTACCATTGGTCAATATTCTGAGAGGGAAGGCTATAATGGATCTCAATTTTCCCCCACTTATGAAGATAAAGATGGAGATTGGATGCTTCTTGGGGATGTTCCATGGCAGTAAGTTTGCCTCTAAATTTTATTAATTTTTTCTTTCCATTTCATTTGCTCTTTTATGGTGGTTACTCTGTGTTACAATTTAGTCCTGTTTTGGTGGGAACTGTCCTCAATCCTGGCTATTTTGATTTTGGAGTGAAGTTAGAATTTAGAAGACATGATTGAATAGAATTCAAATACATATAAGCACAACGGAATGAGTTGGTGGTGCAATTGGGTATCTGGTTTGGCGTTAATCCATTTGAACTCTACGATTACGGGTTCGATCACTGGAATCGTAATCCCCTCCCCCAACTTGAACTCAAAAAAAAAAAAAAAAAAAACATATAAGCATTTACAACTCTAGTCATAACTATTTCAATTTATTCGTTATGAAGGTTTGAGATCATAAATAGCACGTGGTTGAATCTTATTCCTAATTTGGTGTTGAAATTTTGAATGCAGGATGTTCATTTGTTCTTGCAAGAGGATGAGAATCATGAAGGGATCGGAAGTTGGGAGACTCAGCTGTGGCGTATGAGAGAAATTCAAATCACAACAAACATAATGCAATTTCCTGTTTGGTTTCTCGGAAAAGAAAATCTGGTCCGTCGGGAAAATTTTGGGAGCCGACCGATATGTGAAGAACTCCTGTAGTAAATATATATTTTTGTTGGGTGGTTTGACAGAAAGATGAGATGAAATTTTCATTGTTCGTCTTTTTGTTGAAGTTTTGGATTTGTTTAACAAATTTAGGAGCTTGTGGGCTGTTATGCTAGAATTACCTTTTTTTTTTATATTTAGAATCAATTTGCAGATGAAATGAAATGAAATTGTAATTAATGTATACTGTTCTTGAAATTGAAGAACTGGTCCTTTTTTTAAGCTAATGTTTGCTTCAACATGAAGGTGTTGATTTTTATAATATTTTTGTTTTTTAAGGCTTTGTTTGTATGGG

mRNA sequence

CGACCATTGATTTCATTCCCCCGTCTTCCACTTGGGCGGCTGATCTTGTCCCTCCTCTGTCCCCTCTGTTGCTACCATTTGTACCGACAATTCCCCATTTCCCCTCTTCTCATGTATAAAACTTCCCCAAACAGATTCCTATCCCCAAACCAAACACACCCTCCTAAACCCAAAACCCACGAATGGCAATGGATTCCAAGCTCAACGATCTGAACCTCGAAGCCACGGAGCTCCGCCTCGGCCTCCCCGGAACCCCCGCCCCAAACAAGAGGAATCTGCACAACCAATCTGCTCCTCCCCCCAAGGCTCAGGTTGTGGGGTGGCCGCCGGTTAGATCTTTTAGGAAAAACACTCTTCAGCCCAAGAAGACGGCGGCGGCGGCGGCGGAGGGTGGTGGGGTTTATGTGAAAGTCAGTATGGATGGAGCGCCTTATTTGAGGAAGGTTGATTTGGGTATGTACAAAGGCTACCCTGAACTCCTCAAGGCTTTGGAGGACATGTTTGAGTTTACCATTGGTCAATATTCTGAGAGGGAAGGCTATAATGGATCTCAATTTTCCCCCACTTATGAAGATAAAGATGGAGATTGGATGCTTCTTGGGGATGTTCCATGGCAGATGTTCATTTGTTCTTGCAAGAGGATGAGAATCATGAAGGGATCGGAAGTTGGGAGACTCAGCTGTGGCGTATGAGAGAAATTCAAATCACAACAAACATAATGCAATTTCCTGTTTGGTTTCTCGGAAAAGAAAATCTGGTCCGTCGGGAAAATTTTGGGAGCCGACCGATATGTGAAGAACTCCTGTAGTAAATATATATTTTTGTTGGGTGGTTTGACAGAAAGATGAGATGAAATTTTCATTGTTCGTCTTTTTGTTGAAGTTTTGGATTTGTTTAACAAATTTAGGAGCTTGTGGGCTGTTATGCTAGAATTACCTTTTTTTTTTATATTTAGAATCAATTTGCAGATGAAATGAAATGAAATTGTAATTAATGTATACTGTTCTTGAAATTGAAGAACTGGTCCTTTTTTTAAGCTAATGTTTGCTTCAACATGAAGGTGTTGATTTTTATAATATTTTTGTTTTTTAAGGCTTTGTTTGTATGGG

Coding sequence (CDS)

ATGGCAATGGATTCCAAGCTCAACGATCTGAACCTCGAAGCCACGGAGCTCCGCCTCGGCCTCCCCGGAACCCCCGCCCCAAACAAGAGGAATCTGCACAACCAATCTGCTCCTCCCCCCAAGGCTCAGGTTGTGGGGTGGCCGCCGGTTAGATCTTTTAGGAAAAACACTCTTCAGCCCAAGAAGACGGCGGCGGCGGCGGCGGAGGGTGGTGGGGTTTATGTGAAAGTCAGTATGGATGGAGCGCCTTATTTGAGGAAGGTTGATTTGGGTATGTACAAAGGCTACCCTGAACTCCTCAAGGCTTTGGAGGACATGTTTGAGTTTACCATTGGTCAATATTCTGAGAGGGAAGGCTATAATGGATCTCAATTTTCCCCCACTTATGAAGATAAAGATGGAGATTGGATGCTTCTTGGGGATGTTCCATGGCAGATGTTCATTTGTTCTTGCAAGAGGATGAGAATCATGAAGGGATCGGAAGTTGGGAGACTCAGCTGTGGCGTATGA

Protein sequence

MAMDSKLNDLNLEATELRLGLPGTPAPNKRNLHNQSAPPPKAQVVGWPPVRSFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCGV

Homology

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BLAST of Sed0023844 vs. NCBI nr
Match: XP_038875234.1 (auxin-induced protein 22B-like [Benincasa hispida])

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 145/187 (77.54%), Postives = 156/187 (83.42%), Query Frame = 0


Query: 3   MDSKL---NDLNLEATELRLGLPG------TPAP---------NKRNLHNQSAPPPKAQV 62
           M+SK+   NDLNLEATELRLGLPG       PA          NKRN H  SAPPPKAQV
Sbjct: 1   MESKVAFQNDLNLEATELRLGLPGIVTERDDPAENSSGVIKPNNKRNFHKDSAPPPKAQV 60

Query: 63  VGWPPVRSFRKNTLQPKKTAA--AAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKA 122
           VGWPP+RSFRKNTLQ KKT A  AAA+GGG+YVKVSMDGAPYLRK+DL +YKGYPELLKA
Sbjct: 61  VGWPPIRSFRKNTLQVKKTEATMAAADGGGIYVKVSMDGAPYLRKIDLSLYKGYPELLKA 120

Query: 123 LEDMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEV 170
           LEDMF+FTIGQYSEREGY GS+F+PTYEDKDGDWML+GDVPWQMFI SCKRMRIMKGSEV
Sbjct: 121 LEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEV 180

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BLAST of Sed0023844 vs. NCBI nr
Match: XP_008449289.1 (PREDICTED: auxin-induced protein 22B [Cucumis melo] >KAA0057481.1 auxin-induced protein 22B [Cucumis melo var. makuwa] >TYK30177.1 auxin-induced protein 22B [Cucumis melo var. makuwa])

HSP 1 Score: 280.4 bits (716), Expect = 1.0e-71
Identity = 138/178 (77.53%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 8   NDLNLEATELRLGLPGTPAP--------------NKRNLHNQSAPPPKAQVVGWPPVRSF 67
           NDLNLEATELRLGLPG  +               NKRN  N SAPPPKAQVVGWPP+RSF
Sbjct: 9   NDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVVGWPPIRSF 68

Query: 68  RKNTLQPKKTAA--AAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTI 127
           RKNTLQ KKT A  AA +GGG+YVKVSMDGAPYLRK+DL +YKGYPE LKALEDMF+FTI
Sbjct: 69  RKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKALEDMFKFTI 128

Query: 128 GQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCGV 170
           GQYSEREGY GS F+PTYEDKDGDWML+GDVPWQMFI SCKRMRIMKGSEVG LSCGV
Sbjct: 129 GQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCGV 186

[Close]

BLAST of Sed0023844 vs. NCBI nr
Match: XP_004150434.1 (auxin-induced protein 22B [Cucumis sativus] >KGN61645.1 hypothetical protein Csa_006659 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 138/178 (77.53%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 8   NDLNLEATELRLGLPGTPAP--------------NKRNLHNQSAPPPKAQVVGWPPVRSF 67
           NDLNLEATELRLGLPG  +               NKRN  N SAPPPKAQVVGWPP+RSF
Sbjct: 9   NDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVVGWPPIRSF 68

Query: 68  RKNTLQPKKTAA--AAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTI 127
           RKNTLQ KKT A   A +GGG+YVKVSMDGAPYLRK+DL +YKGYPELLKALEDMF+FTI
Sbjct: 69  RKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKALEDMFKFTI 128

Query: 128 GQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCGV 170
           GQYSEREGY GS F+PTYEDKDGDWML+GDVPWQMFI SCKRMRIMKGSEVG LSCGV
Sbjct: 129 GQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCGV 186

[Close]

BLAST of Sed0023844 vs. NCBI nr
Match: XP_022138413.1 (auxin-responsive protein IAA4-like [Momordica charantia])

HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71
Identity = 139/185 (75.14%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 3   MDSKL---NDLNLEATELRLGLPGTPA--------------PNKRNLHNQSAPPPKAQVV 62
           M++K+   + LNLEATELRLGLPG+ A               NKRN  N SAPPPKAQVV
Sbjct: 35  MEAKIGFESGLNLEATELRLGLPGSIADERRDSGENSSGVRTNKRNFQNDSAPPPKAQVV 94

Query: 63  GWPPVRSFRKNTLQPKKT-AAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALE 122
           GWPP+RSFRKNTLQ KKT AAA AEGGG +VKVSMDGAPYLRK+DLG+YKGYPELLKALE
Sbjct: 95  GWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALE 154

Query: 123 DMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGR 170
           DMF+FTIGQYSEREGY GS+F+PTYEDKDGDWML+GDVPWQMFI SCKR+RIM+GS+VG 
Sbjct: 155 DMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLVGDVPWQMFILSCKRLRIMRGSDVGG 214

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BLAST of Sed0023844 vs. NCBI nr
Match: XP_022961610.1 (auxin-responsive protein IAA4-like [Cucurbita moschata])

HSP 1 Score: 278.9 bits (712), Expect = 3.0e-71
Identity = 138/180 (76.67%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 3   MDSKL---NDLNLEATELRLGLPGTPA---------PNKRNLHNQSAPPPKAQVVGWPPV 62
           MDSKL   N LNLEATELRLGLPGT            NKRNL N SAPPPK+QVVGWPP+
Sbjct: 1   MDSKLSFQNHLNLEATELRLGLPGTDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 63  RSFRKNTLQPKKT-AAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEF 122
           RSFRKNTL PKKT A  AAEGGG+YVKVSMDGAPYLRKVDLG+YKGYPEL+K LE+MF+F
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGYPELVKGLEEMFKF 120

Query: 123 TIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCGV 170
            +G Y EREGY GS ++PTYEDKDGDWML+GDVPWQMFI SCKR+RIMKGSEVG LSCGV
Sbjct: 121 RMGTYREREGYQGSDYAPTYEDKDGDWMLVGDVPWQMFISSCKRLRIMKGSEVGGLSCGV 180

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BLAST of Sed0023844 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-58
Identity = 113/177 (63.84%), Postives = 134/177 (75.71%), Query Frame = 0


Query: 10  LNLEATELRLGLPGTP------APNKRNL------------HNQSAPPPKAQVVGWPPVR 69
           +NL+ATELRLGLPGT         NKR L              ++A PPKAQ+VGWPPVR
Sbjct: 11  VNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPPVR 70

Query: 70  SFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTI 129
           S+RKN +Q KK   + +EG G YVKVSMDGAPYLRK+DL MYK YPEL+K+LE+MF+F++
Sbjct: 71  SYRKNNVQTKK---SESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSV 130

Query: 130 GQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCG 169
           G+Y EREGY GS F PTYEDKDGDWML+GDVPW+MF+ SCKR+RIMKGSEV  L CG
Sbjct: 131 GEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCG 184

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BLAST of Sed0023844 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.3e-57
Identity = 112/186 (60.22%), Postives = 132/186 (70.97%), Query Frame = 0


Query: 10  LNLEATELRLGLPGTP-------------APNKRNL-------------HNQSAPPPKAQ 69
           +NL+ TELRLGLPGT                NKR L               +++PP KAQ
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 70  VVGWPPVRSFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKAL 129
           +VGWPPVRS+RKN +Q KK   +  EG G+YVKVSMDGAPYLRK+DL  YKGY ELLKAL
Sbjct: 65  IVGWPPVRSYRKNNIQSKKN-ESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKAL 124

Query: 130 EDMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVG 170
           E MF+F++G+Y ER+GY GS F PTYEDKDGDWML+GDVPW+MFIC+CKR+RIMKGSE  
Sbjct: 125 EVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAK 184

[Close]

BLAST of Sed0023844 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.3e-57
Identity = 113/195 (57.95%), Postives = 133/195 (68.21%), Query Frame = 0


Query: 8   NDLNLEATELRLGLPGTPAPNKRNL---------------------------HNQ----- 67
           +DLNL+ATELRLGLPGT      NL                           H+Q     
Sbjct: 9   SDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKASHHQQHVET 68

Query: 68  -SAPPPKAQVVGWPPVRSFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYK 127
            SAPPPKA++VGWPP+RS+RKN++Q         EG G++VKVSMDGAPYLRKVDL +Y 
Sbjct: 69  VSAPPPKAKIVGWPPIRSYRKNSVQ-------EGEGDGIFVKVSMDGAPYLRKVDLKVYG 128

Query: 128 GYPELLKALEDMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRM 170
           GYPELLKALE MF+  IG+YSEREGY GS+++PTYEDKDGDWML+GDVPW MF+ SCKR+
Sbjct: 129 GYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRL 188

[Close]

BLAST of Sed0023844 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.3e-57
Identity = 112/191 (58.64%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 2   AMDSKLNDLNLEATELRLGLPGTPAPNKR-----------------NLHNQS-------- 61
           ++ S   +LNL+ATELRLGLPG+  P KR                 ++ N S        
Sbjct: 4   SLGSYEKELNLKATELRLGLPGSDEPEKRATARSNKRSSPEASDEESISNGSDVTKEDNV 63

Query: 62  APPPKAQVVGWPPVRSFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGY 121
            PP KAQVVGWPP+RS+RKN +Q KK     +EG G+YVKVSM GAPYLRK+DL +YK Y
Sbjct: 64  VPPAKAQVVGWPPIRSYRKNNVQQKK--EEESEGNGMYVKVSMAGAPYLRKIDLKVYKSY 123

Query: 122 PELLKALEDMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRI 168
           PELLKALE+MF+   G+YSEREGYNGS+++PTYEDKDGDWML+GDVPW MF+ SCKR+RI
Sbjct: 124 PELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRI 183

[Close]

BLAST of Sed0023844 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-54
Identity = 111/204 (54.41%), Postives = 134/204 (65.69%), Query Frame = 0


Query: 3   MDSKLNDLNLEATELRLGLPGTPAP--------------NKRNL---------------- 62
           M S   +LNL ATELRLGLPG+  P              NKR+                 
Sbjct: 1   MGSYETELNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDS 60

Query: 63  --------HNQ-SAPPPKAQVVGWPPVRSFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAP 122
                   HN+ S  P K QVVGWPP+RSFRKN+LQ KK      +G G+Y+KVSM GAP
Sbjct: 61  SDSTTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKK--VEQGDGTGMYLKVSMAGAP 120

Query: 123 YLRKVDLGMYKGYPELLKALEDMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVP 168
           YLRK+DL +YK YPELLKAL+++F+ T G+YSEREGYNGS+++PTYEDKDGDWML+GDVP
Sbjct: 121 YLRKIDLKVYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVP 180

[Close]

BLAST of Sed0023844 vs. ExPASy TrEMBL
Match: A0A5A7UVE4 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001650 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.9e-72
Identity = 138/178 (77.53%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 8   NDLNLEATELRLGLPGTPAP--------------NKRNLHNQSAPPPKAQVVGWPPVRSF 67
           NDLNLEATELRLGLPG  +               NKRN  N SAPPPKAQVVGWPP+RSF
Sbjct: 9   NDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVVGWPPIRSF 68

Query: 68  RKNTLQPKKTAA--AAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTI 127
           RKNTLQ KKT A  AA +GGG+YVKVSMDGAPYLRK+DL +YKGYPE LKALEDMF+FTI
Sbjct: 69  RKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKALEDMFKFTI 128

Query: 128 GQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCGV 170
           GQYSEREGY GS F+PTYEDKDGDWML+GDVPWQMFI SCKRMRIMKGSEVG LSCGV
Sbjct: 129 GQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCGV 186

[Close]

BLAST of Sed0023844 vs. ExPASy TrEMBL
Match: A0A1S3BMB6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103491213 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.9e-72
Identity = 138/178 (77.53%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 8   NDLNLEATELRLGLPGTPAP--------------NKRNLHNQSAPPPKAQVVGWPPVRSF 67
           NDLNLEATELRLGLPG  +               NKRN  N SAPPPKAQVVGWPP+RSF
Sbjct: 9   NDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVVGWPPIRSF 68

Query: 68  RKNTLQPKKTAA--AAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTI 127
           RKNTLQ KKT A  AA +GGG+YVKVSMDGAPYLRK+DL +YKGYPE LKALEDMF+FTI
Sbjct: 69  RKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPEFLKALEDMFKFTI 128

Query: 128 GQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCGV 170
           GQYSEREGY GS F+PTYEDKDGDWML+GDVPWQMFI SCKRMRIMKGSEVG LSCGV
Sbjct: 129 GQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCGV 186

[Close]

BLAST of Sed0023844 vs. ExPASy TrEMBL
Match: A0A0A0LIA8 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.4e-72
Identity = 138/178 (77.53%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 8   NDLNLEATELRLGLPGTPAP--------------NKRNLHNQSAPPPKAQVVGWPPVRSF 67
           NDLNLEATELRLGLPG  +               NKRN  N SAPPPKAQVVGWPP+RSF
Sbjct: 9   NDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVVGWPPIRSF 68

Query: 68  RKNTLQPKKTAA--AAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTI 127
           RKNTLQ KKT A   A +GGG+YVKVSMDGAPYLRK+DL +YKGYPELLKALEDMF+FTI
Sbjct: 69  RKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKALEDMFKFTI 128

Query: 128 GQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCGV 170
           GQYSEREGY GS F+PTYEDKDGDWML+GDVPWQMFI SCKRMRIMKGSEVG LSCGV
Sbjct: 129 GQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCGV 186

[Close]

BLAST of Sed0023844 vs. ExPASy TrEMBL
Match: A0A6J1CCX2 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111009592 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 139/185 (75.14%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 3   MDSKL---NDLNLEATELRLGLPGTPA--------------PNKRNLHNQSAPPPKAQVV 62
           M++K+   + LNLEATELRLGLPG+ A               NKRN  N SAPPPKAQVV
Sbjct: 35  MEAKIGFESGLNLEATELRLGLPGSIADERRDSGENSSGVRTNKRNFQNDSAPPPKAQVV 94

Query: 63  GWPPVRSFRKNTLQPKKT-AAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALE 122
           GWPP+RSFRKNTLQ KKT AAA AEGGG +VKVSMDGAPYLRK+DLG+YKGYPELLKALE
Sbjct: 95  GWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALE 154

Query: 123 DMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGR 170
           DMF+FTIGQYSEREGY GS+F+PTYEDKDGDWML+GDVPWQMFI SCKR+RIM+GS+VG 
Sbjct: 155 DMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLVGDVPWQMFILSCKRLRIMRGSDVGG 214

[Close]

BLAST of Sed0023844 vs. ExPASy TrEMBL
Match: A0A6J1HCQ7 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462208 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71
Identity = 138/180 (76.67%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 3   MDSKL---NDLNLEATELRLGLPGTPA---------PNKRNLHNQSAPPPKAQVVGWPPV 62
           MDSKL   N LNLEATELRLGLPGT            NKRNL N SAPPPK+QVVGWPP+
Sbjct: 1   MDSKLSFQNHLNLEATELRLGLPGTDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPI 60

Query: 63  RSFRKNTLQPKKT-AAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEF 122
           RSFRKNTL PKKT A  AAEGGG+YVKVSMDGAPYLRKVDLG+YKGYPEL+K LE+MF+F
Sbjct: 61  RSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGYPELVKGLEEMFKF 120

Query: 123 TIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCGV 170
            +G Y EREGY GS ++PTYEDKDGDWML+GDVPWQMFI SCKR+RIMKGSEVG LSCGV
Sbjct: 121 RMGTYREREGYQGSDYAPTYEDKDGDWMLVGDVPWQMFISSCKRLRIMKGSEVGGLSCGV 180

[Close]

BLAST of Sed0023844 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.2e-59
Identity = 113/177 (63.84%), Postives = 134/177 (75.71%), Query Frame = 0


Query: 10  LNLEATELRLGLPGTP------APNKRNL------------HNQSAPPPKAQVVGWPPVR 69
           +NL+ATELRLGLPGT         NKR L              ++A PPKAQ+VGWPPVR
Sbjct: 11  VNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPPVR 70

Query: 70  SFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTI 129
           S+RKN +Q KK   + +EG G YVKVSMDGAPYLRK+DL MYK YPEL+K+LE+MF+F++
Sbjct: 71  SYRKNNVQTKK---SESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSV 130

Query: 130 GQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRLSCG 169
           G+Y EREGY GS F PTYEDKDGDWML+GDVPW+MF+ SCKR+RIMKGSEV  L CG
Sbjct: 131 GEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCG 184

[Close]

BLAST of Sed0023844 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-58
Identity = 112/186 (60.22%), Postives = 132/186 (70.97%), Query Frame = 0


Query: 10  LNLEATELRLGLPGTP-------------APNKRNL-------------HNQSAPPPKAQ 69
           +NL+ TELRLGLPGT                NKR L               +++PP KAQ
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 70  VVGWPPVRSFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKAL 129
           +VGWPPVRS+RKN +Q KK   +  EG G+YVKVSMDGAPYLRK+DL  YKGY ELLKAL
Sbjct: 65  IVGWPPVRSYRKNNIQSKKN-ESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKAL 124

Query: 130 EDMFEFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVG 170
           E MF+F++G+Y ER+GY GS F PTYEDKDGDWML+GDVPW+MFIC+CKR+RIMKGSE  
Sbjct: 125 EVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAK 184

[Close]

BLAST of Sed0023844 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 201.1 bits (510), Expect = 7.3e-52
Identity = 105/169 (62.13%), Postives = 121/169 (71.60%), Query Frame = 0


Query: 8   NDLNLEATELRLGLPGTP-----------APNKRNLHN---QSAPPP-KAQVVGWPPVRS 67
           N LNL+ TELRLGLPG             + NKR  ++   +SAPPP K Q+VGWPPVRS
Sbjct: 5   NGLNLKDTELRLGLPGAQEEQQLELSCVRSNNKRKNNDSTEESAPPPAKTQIVGWPPVRS 64

Query: 68  FRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMFEFTIG 127
            RKN      +          YVKVSMDGAPYLRK+DL MYK YPELLKALE+MF+FT+G
Sbjct: 65  NRKNNNNKNVS----------YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVG 124

Query: 128 QYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSE 162
           +YSEREGY GS F PTYEDKDGDWML+GDVPW MF  SC+++RIMKGSE
Sbjct: 125 EYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163

[Close]

BLAST of Sed0023844 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 191.8 bits (486), Expect = 4.4e-49
Identity = 102/178 (57.30%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 6   KLNDLNLEATELRLGLPG-------------TPAPNKRNL-----HNQSAPPPKAQVVGW 65
           K+N+LNL+ TEL LGLPG               + NKR         +S PP K Q+VGW
Sbjct: 5   KVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGW 64

Query: 66  PPVRSFRKNTLQPKKTAAAAAEGGGVYVKVSMDGAPYLRKVDLGMYKGYPELLKALEDMF 125
           PPVRS RKN                 YVKVSMDGAPYLRK+DL  YK YPELLKALE+MF
Sbjct: 65  PPVRSSRKN------------NNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMF 124

Query: 126 EFTIGQYSEREGYNGSQFSPTYEDKDGDWMLLGDVPWQMFICSCKRMRIMKGSEVGRL 166
           +  IG+Y EREGY GS F PTYEDKDGDWML+GDVPW MF  SCKR+RIMKGS+   L
Sbjct: 125 KVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170

[Close]

BLAST of Sed0023844 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 162.5 bits (410), Expect = 2.9e-40
Identity = 99/219 (45.21%), Postives = 118/219 (53.88%), Query Frame = 0


Query: 10  LNLEATELRLGLPG-------------------------------TPAPNKRNLHNQS-- 69
           +N EATELRLGLPG                                 + +K +L N    
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 70  --APPPKAQVVGWPPVRSFRKNTLQPKK-------------------TAAAAAEGGGVYV 129
              PP KAQVVGWPPVRSFRKN +  +K                   T++A+A     YV
Sbjct: 62  VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYV 121

Query: 130 KVSMDGAPYLRKVDLGMYKGYPELLKALEDMF-EFTIGQYSER------------EGYNG 162
           KVSMDGAPYLRK+DL +YK Y +L  AL  MF  FTIG Y  +            +  NG
Sbjct: 122 KVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNG 181

The following BLAST results are available for this feature:

BLAST of Sed0023844 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875234.1	1.4e-73	77.54	auxin-induced protein 22B-like [Benincasa hispida]	[more]
XP_008449289.1	1.0e-71	77.53	PREDICTED: auxin-induced protein 22B [Cucumis melo] >KAA0057481.1 auxin-induced ...	[more]
XP_004150434.1	1.3e-71	77.53	auxin-induced protein 22B [Cucumis sativus] >KGN61645.1 hypothetical protein Csa...	[more]
XP_022138413.1	2.3e-71	75.14	auxin-responsive protein IAA4-like [Momordica charantia]	[more]
XP_022961610.1	3.0e-71	76.67	auxin-responsive protein IAA4-like [Cucurbita moschata]	[more]

BLAST of Sed0023844 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33077	1.7e-58	63.84	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
Q38822	3.3e-57	60.22	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
P32294	4.3e-57	57.95	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]
O24542	4.3e-57	58.64	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
O24543	5.8e-54	54.41	Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S...	[more]

BLAST of Sed0023844 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVE4	4.9e-72	77.53	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BMB6	4.9e-72	77.53	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103491213 PE=3 SV=1	[more]
A0A0A0LIA8	6.4e-72	77.53	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G200440 PE=3 SV=1	[more]
A0A6J1CCX2	1.1e-71	75.14	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111009592 PE=3 SV=...	[more]
A0A6J1HCQ7	1.4e-71	76.67	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462208 PE=3 SV=1	[more]

BLAST of Sed0023844 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43700.1	1.2e-59	63.84	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	2.3e-58	60.22	AUX/IAA transcriptional regulator family protein	[more]
AT4G14560.1	7.3e-52	62.13	indole-3-acetic acid inducible	[more]
AT3G23030.1	4.4e-49	57.30	indole-3-acetic acid inducible 2	[more]
AT3G04730.1	2.9e-40	45.21	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 50..152 e-value: 1.7E-43 score: 148.8
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 23..147
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 49..141
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 24..146 e-value: 1.1E-53 score: 182.6
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 23..147
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 55..142 score: 25.35568

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023844.1	Sed0023844.1	mRNA
Sed0023844.2	Sed0023844.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding