Sed0023833 (gene) Chayote v1

Overview


Name	Sed0023833
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein OBERON 3-like
Location	LG11: 30545817 .. 30547677 (+)
RNA-Seq Expression	Sed0023833
Synteny	Sed0023833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGAATGCTGGAAGCAAGCTTATGGGTTCCGATGGGTTGCATCCGAAATCTGCCAGAATCGCCGATTCATTGGGGAAAGGTAAGGAAGTTTTGTTTTCTGATGATGATGATGGTAAATGGGTTGAAAGAAAATCAATGGAAACGGGAAGTTGAGGATGAAATTGAAAGGGAAAATCGGGGAAAGAAGCCGAAACTTGAAACACTTCATCGTTCTTTAGCTTTGATGACCAACGCCCAATTTACTTGTTCTGATGATTTCACTTGCTCGTCGACCCAAAATTCGAGTGAGAGTTGCGAGTATTCGGTTGGGAGAGACGATCATGTTAGGAACTGTGGACAGGGAACTAATGGGTCTGTTCATAGCAGGTTCAAACCTTTAGGGGATGGAGTTACCTTTGCCAATCATGGAGGTGGGGGTTCATTCTTTGATGCAGGGGAATCGCCTTTCGAATAAGGAGGTGTGTACTAACTCCGATAAGCACTCCTGCCAGATTGAGGATGGGGCTTCTGAGCTTGTGGACATTTTCTTGTTTTTGATGTGCCATAACTGCCAGAATGGAACACCAATTGATTGCTGAGTGCAAAATTTGCTCAGCCCAAAAGGGATTTTGCAGATCATGTATGTGCACCATCTGTTGGAACTTTGATTCTGAAAAAATGACTTGTAGTTGGGTTCATTGTGATGTCTGCGGCCATTGGTGCCATGATGCCTGTGGGTTTGAGAAGAATCTCATCCGACTTGGTCCGAGCCTTAAAGGCCCGGAGGGGACGACGGAGATGCAGTTCCACTGTACTGCTTGTTACGGGTGTTCACATTTTATCCGAAAACCGAACCGACCGACCAAAACCTACCGAATCAAGGTCGGTCGGTCGGTTTTTTGATAAGGTCGGTCGGAGTCGGTTAAATTAAATAATTAACCGACGGTCGGTCGGTCGGTCAGTCAGAGAATTTTCTAAAAAAATTAAGTTATAAGAGTAAATCCATGGTTTCCAAATGAAAAATATTTAGATTTTTTTTTAAAAAACCTTAACCGACCGACCGACCGTAGGTCGGAATTCTCGATTCAAATTTTTTTTTCGGTTTTTATTATTAGAAAACCGATATGTCGTTTATCAATGTCGGTTTTCTCCAAAAAACGACCCCGACCGACCGACGAACACCCTACTGCTTGTAACTACGCTTCAGAGATGAATGTTTTTGTACGCAGTGTAAATTTAAATATGCATTGGAGTCTAGAAACCTTGATGAAGGAGCTCGAGTGTGTAAAGAGGTTCTTCATTGGAAGTGATGACTACAAAGGCAAGGATTTGTATATTAAAGCTGCTCGGATTCTTGCCAAGCTAGAAACGAAAGCACTTGCTCCTTGGGAGGCCCGCAATATCTTTCTTGAATACTTCAATACTAAGGGTCAGGCCATAATGTCAAAATTAAACCTGGAAGTAGTAGATTCAGTGGCTTTATGAAATGTTTTATAAACGATTGTCAAAATTAATTTAAAGTTCATGGACAGGATTGGCCATTTCAGAGTACAATGATCCGAAGAATAGCTGCATTGTCTTTTCGGTTGTGTTTAATCCTTTTTGTTTCATTTGATGATGCCTATGTTTTCTTCAAATATTGGAGTTATTTGGTGTTGCACATTTTTGTGTTACCATATGCATGGTTCAACATGATAATTGGACTTGGTTCTCTTATGATTAAATGCAGATGCCACATTAGATATTTCAACTTCAGGGCTATTCTCCGAGAAGTTGGGAACAACGGATACGACCAGCCTATCGAAAGATGCGATGTCTCTTCCTCAAACGGGTTCCCTACCTTCAACCTAGGCCATGCAGAAAAACACCCCATCTAG

mRNA sequence

ATGGCGAGAATGCTGGAAGCAAGCTTATGGGTTCCGATGGGTTGCATCCGAAATCTGCCAGAATCGCCGATTCATTGGGGAAAGGTAAGGAAGTTTTGTTTTCTGATGATGATGATGGTAAATGGGTTGAAAGAAAATCAATGGAAACGGGAAGTTGAGGATGAAATTGAAAGGGAAAATCGGGGAAAGAAGCCGAAACTTGAAACACTTCATCGTTCTTTAGCTTTGATGACCAACGCCCAATTTACTTGTTCTGATGATTTCACTTGCTCGTCGACCCAAAATTCGAGTGAGAGTTGCGAGTATTCGGTTGGGAGAGACGATCATGTTAGGAACTGTGGACAGGGAACTAATGGGTCTGTTCATAGCAGGGGAATCGCCTTTCGAATAAGGAGTGTAAATTTAAATATGCATTGGAGTCTAGAAACCTTGATGAAGGAGCTCGAGTGTGTAAAGAGGTTCTTCATTGGAAGTGATGACTACAAAGGCAAGGATTTGTATATTAAAGCTGCTCGGATTCTTGCCAAGCTAGAAACGAAAGCACTTGCTCCTTGGGAGGCCCGCAATATCTTTCTTGAATACTTCAATACTAAGGGTCAGGCCATAATATGCCACATTAGATATTTCAACTTCAGGGCTATTCTCCGAGAAGTTGGGAACAACGGATACGACCAGCCTATCGAAAGATGCGATGTCTCTTCCTCAAACGGGTTCCCTACCTTCAACCTAGGCCATGCAGAAAAACACCCCATCTAG

Coding sequence (CDS)

ATGGCGAGAATGCTGGAAGCAAGCTTATGGGTTCCGATGGGTTGCATCCGAAATCTGCCAGAATCGCCGATTCATTGGGGAAAGGTAAGGAAGTTTTGTTTTCTGATGATGATGATGGTAAATGGGTTGAAAGAAAATCAATGGAAACGGGAAGTTGAGGATGAAATTGAAAGGGAAAATCGGGGAAAGAAGCCGAAACTTGAAACACTTCATCGTTCTTTAGCTTTGATGACCAACGCCCAATTTACTTGTTCTGATGATTTCACTTGCTCGTCGACCCAAAATTCGAGTGAGAGTTGCGAGTATTCGGTTGGGAGAGACGATCATGTTAGGAACTGTGGACAGGGAACTAATGGGTCTGTTCATAGCAGGGGAATCGCCTTTCGAATAAGGAGTGTAAATTTAAATATGCATTGGAGTCTAGAAACCTTGATGAAGGAGCTCGAGTGTGTAAAGAGGTTCTTCATTGGAAGTGATGACTACAAAGGCAAGGATTTGTATATTAAAGCTGCTCGGATTCTTGCCAAGCTAGAAACGAAAGCACTTGCTCCTTGGGAGGCCCGCAATATCTTTCTTGAATACTTCAATACTAAGGGTCAGGCCATAATATGCCACATTAGATATTTCAACTTCAGGGCTATTCTCCGAGAAGTTGGGAACAACGGATACGACCAGCCTATCGAAAGATGCGATGTCTCTTCCTCAAACGGGTTCCCTACCTTCAACCTAGGCCATGCAGAAAAACACCCCATCTAG

Protein sequence

MARMLEASLWVPMGCIRNLPESPIHWGKVRKFCFLMMMMVNGLKENQWKREVEDEIERENRGKKPKLETLHRSLALMTNAQFTCSDDFTCSSTQNSSESCEYSVGRDDHVRNCGQGTNGSVHSRGIAFRIRSVNLNMHWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFNTKGQAIICHIRYFNFRAILREVGNNGYDQPIERCDVSSSNGFPTFNLGHAEKHPI

Homology

[Close]

BLAST of Sed0023833 vs. NCBI nr
Match: XP_022991195.1 (protein OBERON 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-37
Identity = 87/125 (69.60%), Postives = 95/125 (76.00%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN- 197
           +W LETLMKELECVKR FIGSDDYKGKDLYIKAARILAKLE+KALAPWEA NI LEYFN 
Sbjct: 542 NWGLETLMKELECVKRIFIGSDDYKGKDLYIKAARILAKLESKALAPWEACNIILEYFNL 601

Query: 198 -------TKGQAII---CHIRYFNFRAILREVGNNGYDQPIERCDVSSSNGFPTFNLGHA 252
                    G  +I    HIR FNFR ILREVGNN + QP++R DV+ S GFPTF +  A
Sbjct: 602 CFDQHNQRLGSIMIECRWHIRDFNFRGILREVGNNRHGQPVKRGDVAPSVGFPTFIIRDA 661

[Close]

BLAST of Sed0023833 vs. NCBI nr
Match: XP_022991195.1 (protein OBERON 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-17
Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 40  VNGLKENQWKREVEDEIERENRGKKPKLETLHRSLAL----------------------- 99
           +N ++ NQ KRE+E+EIERENRGKKPKLETL+ SLAL                       
Sbjct: 117 LNSIRGNQSKREIEEEIERENRGKKPKLETLNLSLALPEVSLSLTASNALHNEDPPPVRS 176

Query: 100 ------------MTNAQFTCSDDFT-----------------CSSTQNSSESCEYSVGRD 125
                       M N Q TCS+DFT                 CS T+NS+E+ EYSVGRD
Sbjct: 177 KPCRSVQSLAPSMNNTQTTCSNDFTAASLSYSYSHQFSHNPSCSLTRNSTENYEYSVGRD 236

HSP 2 Score: 112.5 bits (280), Expect = 5.4e-21
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W LETLMKELECVKR FIGSDDYKGKDLYIKAARILAKLE+KALAPWEA NI LEYFN
Sbjct: 542 NWGLETLMKELECVKRIFIGSDDYKGKDLYIKAARILAKLESKALAPWEACNIILEYFN 600

[Close]

BLAST of Sed0023833 vs. NCBI nr
Match: KAG6601894.1 (Protein OBERON 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-17
Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 40  VNGLKENQWKREVEDEIERENRGKKPKLETLHRSLAL----------------------- 99
           +N ++ NQ KRE+E+EIERENRGKKPKLETL+ SLAL                       
Sbjct: 117 LNSIRGNQSKREIEEEIERENRGKKPKLETLNLSLALPEVSLSLTASNALHNEDPPPVRS 176

Query: 100 ------------MTNAQFTCSDDFT-----------------CSSTQNSSESCEYSVGRD 125
                       M N Q TCS+DFT                 CS T+NS+E+ EYSVGRD
Sbjct: 177 KPCRSVQSLAPSMNNTQTTCSNDFTAASLSYSYSHQFSHNPSCSLTRNSTENYEYSVGRD 236

HSP 2 Score: 112.5 bits (280), Expect = 5.4e-21
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W LETLMKELECVKR FIGSDDYKGKDLYIKAARILAKLE+KALAPWEA NI LEYFN
Sbjct: 542 NWGLETLMKELECVKRIFIGSDDYKGKDLYIKAARILAKLESKALAPWEACNIILEYFN 600

[Close]

BLAST of Sed0023833 vs. NCBI nr
Match: XP_022991194.1 (protein OBERON 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-17
Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 40  VNGLKENQWKREVEDEIERENRGKKPKLETLHRSLAL----------------------- 99
           +N ++ NQ KRE+E+EIERENRGKKPKLETL+ SLAL                       
Sbjct: 117 LNSIRGNQSKREIEEEIERENRGKKPKLETLNLSLALPEVSLSLTASNALHNEDPPPVRS 176

Query: 100 ------------MTNAQFTCSDDFT-----------------CSSTQNSSESCEYSVGRD 125
                       M N Q TCS+DFT                 CS T+NS+E+ EYSVGRD
Sbjct: 177 KPCRSVQSLAPSMNNTQTTCSNDFTAASLSYSYSHQFSHNPSCSLTRNSTENYEYSVGRD 236

HSP 2 Score: 112.5 bits (280), Expect = 5.4e-21
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W LETLMKELECVKR FIGSDDYKGKDLYIKAARILAKLE+KALAPWEA NI LEYFN
Sbjct: 542 NWGLETLMKELECVKRIFIGSDDYKGKDLYIKAARILAKLESKALAPWEACNIILEYFN 600

[Close]

BLAST of Sed0023833 vs. NCBI nr
Match: XP_022960211.1 (protein OBERON 3-like [Cucurbita moschata])

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-17
Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 40  VNGLKENQWKREVEDEIERENRGKKPKLETLHRSLAL----------------------- 99
           +N ++ NQ KRE+E+EIERENRGKKPKLETL+ SLAL                       
Sbjct: 117 LNSIRGNQSKREIEEEIERENRGKKPKLETLNLSLALPEVSLSLTASNALHNEDPPPVRS 176

Query: 100 ------------MTNAQFTCSDDFT-----------------CSSTQNSSESCEYSVGRD 125
                       M N Q TCS+DFT                 CS T+NS+E+ EYSVGRD
Sbjct: 177 KPCRSVQSLAPSMNNTQTTCSNDFTAASLSYSYSHQFSHSPSCSLTRNSTENYEYSVGRD 236

HSP 2 Score: 112.5 bits (280), Expect = 5.4e-21
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W LETLMKELECVKR FIGSDDYKGKDLYIKAARILAKLE+KALAPWEA NI LEYFN
Sbjct: 542 NWGLETLMKELECVKRIFIGSDDYKGKDLYIKAARILAKLESKALAPWEACNIILEYFN 600

[Close]

BLAST of Sed0023833 vs. ExPASy Swiss-Prot
Match: Q94B71 (Protein OBERON 3 OS=Arabidopsis thaliana OX=3702 GN=OBE3 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.2e-12
Identity = 30/59 (50.85%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W LETL+KEL+CV++ F GSDD KGK L++KA  ++ KLE+K ++P +A N  +++FN
Sbjct: 517 NWGLETLIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFN 575

[Close]

BLAST of Sed0023833 vs. ExPASy Swiss-Prot
Match: Q10PC5 (Protein TITANIA OS=Oryza sativa subsp. japonica OX=39947 GN=TTA PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.5e-08
Identity = 25/58 (43.10%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYF 196
           +W+ ETLMKEL+ V++ F G +D++GK L+ KA  +L+ L  K ++P +A N  L++F
Sbjct: 487 NWNAETLMKELDFVRKIFAGCEDFEGKGLHAKAEEVLSLLGKKIISPLDATNSILQFF 544

[Close]

BLAST of Sed0023833 vs. ExPASy TrEMBL
Match: A0A6J1JS75 (protein OBERON 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487863 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.9e-38
Identity = 87/125 (69.60%), Postives = 95/125 (76.00%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN- 197
           +W LETLMKELECVKR FIGSDDYKGKDLYIKAARILAKLE+KALAPWEA NI LEYFN 
Sbjct: 542 NWGLETLMKELECVKRIFIGSDDYKGKDLYIKAARILAKLESKALAPWEACNIILEYFNL 601

Query: 198 -------TKGQAII---CHIRYFNFRAILREVGNNGYDQPIERCDVSSSNGFPTFNLGHA 252
                    G  +I    HIR FNFR ILREVGNN + QP++R DV+ S GFPTF +  A
Sbjct: 602 CFDQHNQRLGSIMIECRWHIRDFNFRGILREVGNNRHGQPVKRGDVAPSVGFPTFIIRDA 661

[Close]

BLAST of Sed0023833 vs. ExPASy TrEMBL
Match: A0A6J1JS75 (protein OBERON 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487863 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-18
Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 40  VNGLKENQWKREVEDEIERENRGKKPKLETLHRSLAL----------------------- 99
           +N ++ NQ KRE+E+EIERENRGKKPKLETL+ SLAL                       
Sbjct: 117 LNSIRGNQSKREIEEEIERENRGKKPKLETLNLSLALPEVSLSLTASNALHNEDPPPVRS 176

Query: 100 ------------MTNAQFTCSDDFT-----------------CSSTQNSSESCEYSVGRD 125
                       M N Q TCS+DFT                 CS T+NS+E+ EYSVGRD
Sbjct: 177 KPCRSVQSLAPSMNNTQTTCSNDFTAASLSYSYSHQFSHNPSCSLTRNSTENYEYSVGRD 236

HSP 2 Score: 112.5 bits (280), Expect = 2.6e-21
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W LETLMKELECVKR FIGSDDYKGKDLYIKAARILAKLE+KALAPWEA NI LEYFN
Sbjct: 542 NWGLETLMKELECVKRIFIGSDDYKGKDLYIKAARILAKLESKALAPWEACNIILEYFN 600

[Close]

BLAST of Sed0023833 vs. ExPASy TrEMBL
Match: A0A6J1JU51 (protein OBERON 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487863 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-18
Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 40  VNGLKENQWKREVEDEIERENRGKKPKLETLHRSLAL----------------------- 99
           +N ++ NQ KRE+E+EIERENRGKKPKLETL+ SLAL                       
Sbjct: 117 LNSIRGNQSKREIEEEIERENRGKKPKLETLNLSLALPEVSLSLTASNALHNEDPPPVRS 176

Query: 100 ------------MTNAQFTCSDDFT-----------------CSSTQNSSESCEYSVGRD 125
                       M N Q TCS+DFT                 CS T+NS+E+ EYSVGRD
Sbjct: 177 KPCRSVQSLAPSMNNTQTTCSNDFTAASLSYSYSHQFSHNPSCSLTRNSTENYEYSVGRD 236

HSP 2 Score: 112.5 bits (280), Expect = 2.6e-21
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W LETLMKELECVKR FIGSDDYKGKDLYIKAARILAKLE+KALAPWEA NI LEYFN
Sbjct: 542 NWGLETLMKELECVKRIFIGSDDYKGKDLYIKAARILAKLESKALAPWEACNIILEYFN 600

[Close]

BLAST of Sed0023833 vs. ExPASy TrEMBL
Match: A0A6J1H705 (protein OBERON 3-like OS=Cucurbita moschata OX=3662 GN=LOC111461016 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.9e-18
Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 40  VNGLKENQWKREVEDEIERENRGKKPKLETLHRSLAL----------------------- 99
           +N ++ NQ KRE+E+EIERENRGKKPKLETL+ SLAL                       
Sbjct: 117 LNSIRGNQSKREIEEEIERENRGKKPKLETLNLSLALPEVSLSLTASNALHNEDPPPVRS 176

Query: 100 ------------MTNAQFTCSDDFT-----------------CSSTQNSSESCEYSVGRD 125
                       M N Q TCS+DFT                 CS T+NS+E+ EYSVGRD
Sbjct: 177 KPCRSVQSLAPSMNNTQTTCSNDFTAASLSYSYSHQFSHSPSCSLTRNSTENYEYSVGRD 236

HSP 2 Score: 107.8 bits (268), Expect = 6.5e-20
Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W +ETLMKELECVKR FIGSDDYKGKDLYIKAA+ILAKLE KALAPWEA NI L+YFN
Sbjct: 514 NWGVETLMKELECVKRIFIGSDDYKGKDLYIKAAQILAKLERKALAPWEACNIILDYFN 572

[Close]

BLAST of Sed0023833 vs. ExPASy TrEMBL
Match: A0A6J1K032 (protein OBERON 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489831 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15
Identity = 63/138 (45.65%), Postives = 74/138 (53.62%), Query Frame = 0


Query: 40  VNGLKENQWKREVEDEIER-ENRGKKPKLETLHRSLAL---------------------- 99
           +N  + NQ KREVE+EI+R ENRGKKPKLETL+ SLAL                      
Sbjct: 88  LNSNRGNQSKREVEEEIDRGENRGKKPKLETLNLSLALPEVSLSLTASNALQNEDPPPVP 147

Query: 100 -------------MTNAQFTCSDDFT-----------------CSSTQNSSESCEYSVGR 125
                        M N Q TCS+DFT                 CS T+NS+E+ EYSVGR
Sbjct: 148 SKPCRSLQSLAPSMNNTQTTCSNDFTAASLSYSYSHQFSHNPSCSLTRNSTENFEYSVGR 207

HSP 2 Score: 106.7 bits (265), Expect = 1.4e-19
Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 139 WSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           W LETLMKELECVKR FIGSDDYKGKDLYIKAA++LAKLE KALAPWEA N  LEYFN
Sbjct: 547 WGLETLMKELECVKRIFIGSDDYKGKDLYIKAAQMLAKLERKALAPWEACNTILEYFN 604

[Close]

BLAST of Sed0023833 vs. TAIR 10
Match: AT1G14740.1 (Protein of unknown function (DUF1423) )

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-13
Identity = 30/59 (50.85%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYFN 197
           +W LETL+KEL+CV++ F GSDD KGK L++KA  ++ KLE+K ++P +A N  +++FN
Sbjct: 517 NWGLETLIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFN 575

HSP 2 Score: 43.9 bits (102), Expect = 2.2e-04
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 51  EVEDEIERENRGKKPKLETLHRSLALMTNAQFTC-------------SDDFTCSSTQNSS 110
           +V   +   N  K+P++ T  R+    +N  FT              S + +CS T+NS+
Sbjct: 155 DVSLSLTASNAVKRPRVVTSERTTTSFSN-DFTATAPSMSYSYSHPFSHNISCSMTRNST 214

Query: 111 ESCEYSVGRDDHVRNCGQGTNGSVHSR 125
           +  + SVG+DDH+   G+GTNGSVHSR
Sbjct: 215 D-FDCSVGKDDHIWCAGEGTNGSVHSR 239

[Close]

BLAST of Sed0023833 vs. TAIR 10
Match: AT3G07780.1 (Protein of unknown function (DUF1423) )

HSP 1 Score: 43.9 bits (102), Expect = 2.2e-04
Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYF 196
           +W  E+LMKEL+ V R F GS+D +G+ L+ K   ++ K++   LA   A  + L +F
Sbjct: 306 NWDRESLMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIK-GGLAEATAAKLILMFF 362

[Close]

BLAST of Sed0023833 vs. TAIR 10
Match: AT5G48160.1 (Protein of unknown function (DUF1423) )

HSP 1 Score: 43.9 bits (102), Expect = 2.2e-04
Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYF 196
           +W  E+LMKEL+ V R F GS+D +G+ L+ K   ++ K++   LA   A  + L +F
Sbjct: 308 NWDRESLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIK-GGLAEATAAKLILMFF 364

[Close]

BLAST of Sed0023833 vs. TAIR 10
Match: AT5G48160.2 (Protein of unknown function (DUF1423) )

HSP 1 Score: 43.9 bits (102), Expect = 2.2e-04
Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 138 HWSLETLMKELECVKRFFIGSDDYKGKDLYIKAARILAKLETKALAPWEARNIFLEYF 196
           +W  E+LMKEL+ V R F GS+D +G+ L+ K   ++ K++   LA   A  + L +F
Sbjct: 308 NWDRESLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIK-GGLAEATAAKLILMFF 364

The following BLAST results are available for this feature:

BLAST of Sed0023833 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991195.1	1.4e-37	69.60	protein OBERON 3-like isoform X2 [Cucurbita maxima]	[more]
XP_022991195.1	1.6e-17	45.99	protein OBERON 3-like isoform X2 [Cucurbita maxima]	[more]
KAG6601894.1	1.6e-17	45.99	Protein OBERON 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022991194.1	1.6e-17	45.99	protein OBERON 3-like isoform X1 [Cucurbita maxima]	[more]
XP_022960211.1	1.6e-17	45.99	protein OBERON 3-like [Cucurbita moschata]	[more]

Pages

BLAST of Sed0023833 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B71	8.2e-12	50.85	Protein OBERON 3 OS=Arabidopsis thaliana OX=3702 GN=OBE3 PE=1 SV=1	[more]
Q10PC5	5.5e-08	43.10	Protein TITANIA OS=Oryza sativa subsp. japonica OX=39947 GN=TTA PE=1 SV=1	[more]

BLAST of Sed0023833 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JS75	6.9e-38	69.60	protein OBERON 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487863 PE=...	[more]
A0A6J1JS75	7.9e-18	45.99	protein OBERON 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487863 PE=...	[more]
A0A6J1JU51	7.9e-18	45.99	protein OBERON 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487863 PE=...	[more]
A0A6J1H705	7.9e-18	45.99	protein OBERON 3-like OS=Cucurbita moschata OX=3662 GN=LOC111461016 PE=4 SV=1	[more]
A0A6J1K032	1.3e-15	45.65	protein OBERON 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489831 PE=4 SV=1	[more]

Pages

BLAST of Sed0023833 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14740.1	5.8e-13	50.85	Protein of unknown function (DUF1423)	[more]
AT3G07780.1	2.2e-04	37.93	Protein of unknown function (DUF1423)	[more]
AT5G48160.1	2.2e-04	37.93	Protein of unknown function (DUF1423)	[more]
AT5G48160.2	2.2e-04	37.93	Protein of unknown function (DUF1423)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21736:SF38	PROTEIN OBERON 3	coord: 84..129
None	No IPR available	PANTHER	PTHR21736:SF38	PROTEIN OBERON 3	coord: 138..199
IPR004082	Protein OBERON	PANTHER	PTHR21736	VERNALIZATION-INSENSITIVE PROTEIN 3	coord: 84..129
IPR004082	Protein OBERON	PANTHER	PTHR21736	VERNALIZATION-INSENSITIVE PROTEIN 3	coord: 138..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023833.1	Sed0023833.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055065	metal ion homeostasis
cellular_component	GO:0005634	nucleus