Sed0023824 (gene) Chayote v1

Overview


Name	Sed0023824
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR21-like
Location	LG05: 44272368 .. 44273297 (-)
RNA-Seq Expression	Sed0023824
Synteny	Sed0023824

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACGTGGGTCCGTCATTCGTTGATCTTCCATGACACGGCATTGGTTTTGAAGTTTTCTCGACCTCTTATATTGGACTATAACTGCACATCATTGGAACAAATGGGACTGCTCATCAGTTTGTTGGGGTACATGATGAAGTGCTTCTATTCAAACCAAATAAGCAGCCCATGTGAGCATTTATGAAGTAGGTCCTCTTAGATGCCTAATTGATACTGTTTTCTTCTCATCACTTTCCATTCTATTTCCATAAATACAGATCAAATGGAATTCAATCTCCAACTCAAATTTCAAAACTTCTAGATCTTCATCAAGAAGAAGAAAACATTTCAAAACTAGACATGGGAATCAGATTACCTTCACTTCTCCTCAATGCCAAACAAGTAGTCAAAATGTATACTGCTTCTTCTGGAAACCAGTGTGGTGTTCCCAAAGGCCATATTGCAGTCTACGTGGGCGATATTGAGAGAAAGCGGTTTGTAGTTCCGATATCATACTTGAACCATCCCTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTTTTCATCAATATCACATCCAGCCTATGAAAGTGAGAAGAAAAAAACTCTATACAAATTTTTGCCAGATTCTCTCCAAATTTTTTCCCCATAATTAAGAGTAGCACATTAATGTATAGTTAGTTTCCATATGTAAATGAGGAGTAGCAGAAAAGAGATACATAGAGCTGTAAGCATAAAAATTGAAATAAACAGTCACATTTTTTGTAAGAACTCTGTGCCCCTTAAATTTTAATTCACAATATCCATTTTCATGATACGTTTTATGACCAACAAGAGCATAGCTGCATGATGTATAACTTTGTAACTGAAACATAAGGGTTAAATCCCCA

mRNA sequence

ATGTCACGTGGATCAAATGGAATTCAATCTCCAACTCAAATTTCAAAACTTCTAGATCTTCATCAAGAAGAAGAAAACATTTCAAAACTAGACATGGGAATCAGATTACCTTCACTTCTCCTCAATGCCAAACAAGTAGTCAAAATGTATACTGCTTCTTCTGGAAACCAGTGTGGTGTTCCCAAAGGCCATATTGCAGTCTACGTGGGCGATATTGAGAGAAAGCGGTTTGTAGTTCCGATATCATACTTGAACCATCCCTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTTTTCATCAATATCACATCCAGCCTATGAAAGTGAGAAGAAAAAAACTCTATACAAATTTTTGCCAGATTCTCTCCAAATTTTTTCCCCATAATTAAGAGTAGCACATTAATGTATAGTTAGTTTCCATATGTAAATGAGGAGTAGCAGAAAAGAGATACATAGAGCTGTAAGCATAAAAATTGAAATAAACAGTCACATTTTTTGTAAGAACTCTGTGCCCCTTAAATTTTAATTCACAATATCCATTTTCATGATACGTTTTATGACCAACAAGAGCATAGCTGCATGATGTATAACTTTGTAACTGAAACATAAGGGTTAAATCCCCA

Coding sequence (CDS)

ATGTCACGTGGATCAAATGGAATTCAATCTCCAACTCAAATTTCAAAACTTCTAGATCTTCATCAAGAAGAAGAAAACATTTCAAAACTAGACATGGGAATCAGATTACCTTCACTTCTCCTCAATGCCAAACAAGTAGTCAAAATGTATACTGCTTCTTCTGGAAACCAGTGTGGTGTTCCCAAAGGCCATATTGCAGTCTACGTGGGCGATATTGAGAGAAAGCGGTTTGTAGTTCCGATATCATACTTGAACCATCCCTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTTTTCATCAATATCACATCCAGCCTATGA

Protein sequence

MSRGSNGIQSPTQISKLLDLHQEEENISKLDMGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

Homology

[Close]

BLAST of Sed0023824 vs. NCBI nr
Match: XP_022944352.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata])

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44
Identity = 98/131 (74.81%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 5   SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASS 64
           SN I +P Q +  L L      H     + +++SKLDMGIRLPSLLLNAKQ+VKM T SS
Sbjct: 3   SNQISNPYQTNFNLQLTFQTHPHSSTTLQAKSLSKLDMGIRLPSLLLNAKQIVKMQTVSS 62

Query: 65  GNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCR 124
            NQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCR
Sbjct: 63  RNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCR 122

Query: 125 EDVFINITSSL 126
           EDVFIN+TS L
Sbjct: 123 EDVFINLTSRL 133

[Close]

BLAST of Sed0023824 vs. NCBI nr
Match: XP_023512604.1 (auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 3.9e-44
Identity = 98/131 (74.81%), Postives = 106/131 (80.92%), Query Frame = 0


Query: 5   SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASS 64
           SN I +P Q +  L L      H     + E++SKLDMGIRLPSLLLNAKQ+VKM T SS
Sbjct: 3   SNQISNPYQTNFNLQLTFQTHPHSSTTLQAESLSKLDMGIRLPSLLLNAKQIVKMQTVSS 62

Query: 65  GNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCR 124
            NQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHP GGLTIPCR
Sbjct: 63  RNQCGVPKGHIAVYVGDNERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPPGGLTIPCR 122

Query: 125 EDVFINITSSL 126
           EDVFIN+TS L
Sbjct: 123 EDVFINLTSRL 133

[Close]

BLAST of Sed0023824 vs. NCBI nr
Match: XP_022944372.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata])

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42
Identity = 87/94 (92.55%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 91
           MGIRLPSLLLNAKQ+VKM T SS NQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA
Sbjct: 1   MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60

Query: 92  LLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL 126
           LLK+AEEEFGFKHPTGGLTIPCRE+VFIN+TSSL
Sbjct: 61  LLKTAEEEFGFKHPTGGLTIPCREEVFINLTSSL 94

[Close]

BLAST of Sed0023824 vs. NCBI nr
Match: KGN61882.1 (hypothetical protein Csa_006681 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-42
Identity = 87/94 (92.55%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 91
           MGIRLPSLLLNAKQV KM+T SS NQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1   MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 92  LLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL 126
           LLKSAEEEFGFKHPTGGLTIPCREDVFIN+TS L
Sbjct: 61  LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL 94

[Close]

BLAST of Sed0023824 vs. NCBI nr
Match: XP_008457637.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045679.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99605.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 181.4 bits (459), Expect = 4.8e-42
Identity = 86/94 (91.49%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 91
           MGIRLPSLL NAKQV KM+T SS NQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1   MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 92  LLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL 126
           LLKSAEEEFGFKHPTGGLTIPCREDVFIN+TS L
Sbjct: 61  LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL 94

[Close]

BLAST of Sed0023824 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-23
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 40  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 99
           LL AK   K+ + S+G     PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEE
Sbjct: 7   LLGAK---KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 100 FGFKHPTGGLTIPCREDVFINITSSL 126
           FGF HP GGLTIPC ED FIN+TS L
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0023824 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-23
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 40  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 99
           LL AK+++   TAS+      PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEE
Sbjct: 7   LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 100 FGFKHPTGGLTIPCREDVFINITSSL 126
           FGF HP GGLTIPC ED FIN+TS L
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Sed0023824 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-23
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 40  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 99
           LL AK+++   TA+       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+E
Sbjct: 7   LLGAKKILSRSTAAVS---AAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 100 FGFKHPTGGLTIPCREDVFINITSSL 126
           FGF HP GGLTIPC ED FIN+TS L
Sbjct: 67  FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Sed0023824 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-23
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 40  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 99
           LL AK+++   TA+       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEE
Sbjct: 7   LLGAKKILSRSTAAGS---AAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 100 FGFKHPTGGLTIPCREDVFINITSSL 126
           FGF HP GGLTIPC ED FIN+TS L
Sbjct: 67  FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0023824 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-23
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 40  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 99
           LL AK+++   T ++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEE
Sbjct: 7   LLGAKKILSRSTTAAS---AAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 100 FGFKHPTGGLTIPCREDVFINITS 124
           FGF HP GGLTIPC ED FIN+TS
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTS 87

[Close]

BLAST of Sed0023824 vs. ExPASy TrEMBL
Match: A0A6J1FVH4 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111448819 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.5e-45
Identity = 98/131 (74.81%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 5   SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASS 64
           SN I +P Q +  L L      H     + +++SKLDMGIRLPSLLLNAKQ+VKM T SS
Sbjct: 3   SNQISNPYQTNFNLQLTFQTHPHSSTTLQAKSLSKLDMGIRLPSLLLNAKQIVKMQTVSS 62

Query: 65  GNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCR 124
            NQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCR
Sbjct: 63  RNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSALLKTAEEEFGFKHPTGGLTIPCR 122

Query: 125 EDVFINITSSL 126
           EDVFIN+TS L
Sbjct: 123 EDVFINLTSRL 133

[Close]

BLAST of Sed0023824 vs. ExPASy TrEMBL
Match: A0A6J1FVI6 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111448837 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.1e-43
Identity = 87/94 (92.55%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 91
           MGIRLPSLLLNAKQ+VKM T SS NQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA
Sbjct: 1   MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60

Query: 92  LLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL 126
           LLK+AEEEFGFKHPTGGLTIPCRE+VFIN+TSSL
Sbjct: 61  LLKTAEEEFGFKHPTGGLTIPCREEVFINLTSSL 94

[Close]

BLAST of Sed0023824 vs. ExPASy TrEMBL
Match: A0A0A0LM71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.9e-43
Identity = 87/94 (92.55%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 91
           MGIRLPSLLLNAKQV KM+T SS NQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1   MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 92  LLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL 126
           LLKSAEEEFGFKHPTGGLTIPCREDVFIN+TS L
Sbjct: 61  LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL 94

[Close]

BLAST of Sed0023824 vs. ExPASy TrEMBL
Match: A0A5D3BMR1 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001790 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-42
Identity = 86/94 (91.49%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 91
           MGIRLPSLL NAKQV KM+T SS NQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1   MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 92  LLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL 126
           LLKSAEEEFGFKHPTGGLTIPCREDVFIN+TS L
Sbjct: 61  LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL 94

[Close]

BLAST of Sed0023824 vs. ExPASy TrEMBL
Match: A0A6J1JGW3 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484395 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-42
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 91
           MGIRLPSLLLNAKQVVKM T  S NQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA
Sbjct: 1   MGIRLPSLLLNAKQVVKMQTVPSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60

Query: 92  LLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL 126
           LLK+AEEEFGFKHPTGGLTIPCREDVFIN+TS L
Sbjct: 61  LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRL 94

[Close]

BLAST of Sed0023824 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 5.1e-26
Identity = 52/96 (54.17%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVK----MYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHP 91
           M IR+P +L ++KQ+++    + ++SS +   VPKG++AVYVG+   KRFVVP+SYL+ P
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 92  SFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITS 124
           SF  LL+ AEEEFGF HP GGLTIPC E++FI++ S
Sbjct: 61  SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLAS 96

[Close]

BLAST of Sed0023824 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 8.7e-26
Identity = 52/95 (54.74%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFS 91
           M IR+  +L ++KQ++K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F 
Sbjct: 1   MAIRISRVLQSSKQLLKSLSHSS-NNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 92  ALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL 126
            LL+ AEEEFGF HP GGLTIPC E +FI++ S L
Sbjct: 61  KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRL 94

[Close]

BLAST of Sed0023824 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 7.4e-25
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 40  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 99
           LL AK   K+ + S+G     PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEE
Sbjct: 7   LLGAK---KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 100 FGFKHPTGGLTIPCREDVFINITSSL 126
           FGF HP GGLTIPC ED FIN+TS L
Sbjct: 67  FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0023824 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 9.6e-25
Identity = 57/95 (60.00%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSF 91
           M IRL S ++N+KQ       S   Q  VPKGH+AVYVG+    +KRFVVPISYLNHPSF
Sbjct: 1   MAIRL-SRVINSKQ-------SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 92  SALLKSAEEEFGFKHPTGGLTIPCREDVFINITSS 125
             LL  AEEEFGF HP GGLTIPCRE+ F+ + +S
Sbjct: 61  QGLLSRAEEEFGFNHPIGGLTIPCREETFVGLLNS 87

[Close]

BLAST of Sed0023824 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 32  MGIRLPSLLLNAKQVVKMYTASSGNQCG------VPKGHIAVYVG---DIERKRFVVPIS 91
           MG+   ++    KQ++K+ + ++ N+        VPKGH+AVYVG   ++E+KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 92  YLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSS 125
           +LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF+++ +S
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIAS 102

The following BLAST results are available for this feature:

BLAST of Sed0023824 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944352.1	1.3e-44	74.81	auxin-responsive protein SAUR21-like [Cucurbita moschata]	[more]
XP_023512604.1	3.9e-44	74.81	auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944372.1	1.3e-42	92.55	auxin-responsive protein SAUR21-like [Cucurbita moschata]	[more]
KGN61882.1	1.6e-42	92.55	hypothetical protein Csa_006681 [Cucumis sativus]	[more]
XP_008457637.1	4.8e-42	91.49	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045679.1 aux...	[more]

BLAST of Sed0023824 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	1.0e-23	60.47	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF9	2.3e-23	59.30	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FJF7	2.3e-23	58.14	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	3.9e-23	58.14	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJG0	3.9e-23	59.52	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]

BLAST of Sed0023824 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVH4	6.5e-45	74.81	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1FVI6	6.1e-43	92.55	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A0A0LM71	7.9e-43	92.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=3 SV=1	[more]
A0A5D3BMR1	2.3e-42	91.49	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1JGW3	2.3e-42	92.55	auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484395...	[more]

BLAST of Sed0023824 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	5.1e-26	54.17	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	8.7e-26	54.74	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	7.4e-25	60.47	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	9.6e-25	60.00	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.3e-24	51.96	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 44..124 e-value: 4.0E-26 score: 91.0
None	No IPR available	PANTHER	PTHR31929:SF51	AUXIN-RESPONSIVE PROTEIN SAUR22-LIKE	coord: 32..125
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 32..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023824.1	Sed0023824.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin