Sed0023820 (gene) Chayote v1

Overview
NameSed0023820
Typegene
OrganismSechium edule (Chayote v1)
DescriptionF-box protein SKIP19-like
LocationLG05: 37425446 .. 37426426 (+)
RNA-Seq ExpressionSed0023820
SyntenySed0023820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCATAATTCTGCTCAAGTTAGGCGCCATTGATATTCTATGCAACGTTCAAAACGTCTGCTCTTCTTGGCGTAGGATCTGCAGGGACCCTAGCTTGTGGCGTGTTGTCGATCTTCACAATTTCCGTAACCGGTTCGGCATGGTTTACGATTTGGAGATGATGTGTAGGCAGGCTGTTGATTATAGTTGTGGCCAATTGCTTGATATCAGTATTGACTACTTTGGCACTGATAACTTGCTCCTCCATATCTCTCGCACGTATGTTTTCAGTTTCTATACATTTTTATAATAAGATAGCACAATAAATACAAATCTGAAATAAGGAAAGTTGAACGTCCTATAAGTAAAGTCTGGCATATTTGAAAAGGATTATCTCATCATGAGCTACAGCATGTGAATATTGTGTTATGGTTCGATTTTGACGCAGCTATGTTAAATTTGTTGCAGTTCATAACAACTCAGAAGACTCCGGGTTTTATCTTCCTTTAAAATCTCCCCAAATGGATTGACTAAAGCAGTTTCAAAATTTCCATTATTGTTGGAACATCTCGAAATCTCTGACACAGAATTTTGTGTGGAAACTTTGGGAACTGTTGGATGGTGTAGTCCACATTTGAAGTCTCTAAACCTCAATTACAGAAAATACCATCTATTTGAATGTGATCTGGAAGCCGAGGCTATTGCTGAATATATGCCTAATTTGCATAGCCTTCAGATATGTTGCGGCCCTCTAACTGACAAGGGCTTGGAAGCCATTCTTTATGGTTGTCCTCATTTAGAATCTCTTGATTTACGCCTGTGTTTCAATTTACATTATGCCGAGCCATCGCAAATACATTGTCCCGAAAGGTTTAAGAAATGTCCTCGTGATCCCACCGTTGACTCCGAAACTCTGGTCGAATTGTTTGGTGGTTGTATTACTTCTTATGTTCCTTTTCGTTTTTTTGATTTATCGGATATGGATGATCATGACTACTAA

mRNA sequence

ATGTTCATAATTCTGCTCAAGTTAGGCGCCATTGATATTCTATGCAACGTTCAAAACGTCTGCTCTTCTTGGCGTAGGATCTGCAGGGACCCTAGCTTGTGGCGTGTTGTCGATCTTCACAATTTCCGTAACCGGTTCGGCATGGTTTACGATTTGGAGATGATGTGTAGGCAGGCTGTTGATTATAGTTGTGGCCAATTGCTTGATATCAGTATTGACTACTTTGGCACTGATAACTTGCTCCTCCATATCTCTCGCACAAGACTCCGGGTTTTATCTTCCTTTAAAATCTCCCCAAATGGATTGACTAAAGCAGTTTCAAAATTTCCATTATTGTTGGAACATCTCGAAATCTCTGACACAGAATTTTGTGTGGAAACTTTGGGAACTGTTGGATGGTGTAGTCCACATTTGAAGTCTCTAAACCTCAATTACAGAAAATACCATCTATTTGAATGTGATCTGGAAGCCGAGGCTATTGCTGAATATATGCCTAATTTGCATAGCCTTCAGATATGTTGCGGCCCTCTAACTGACAAGGGCTTGGAAGCCATTCTTTATGGTTGTCCTCATTTAGAATCTCTTGATTTACGCCTGTGTTTCAATTTACATTATGCCGAGCCATCGCAAATACATTGTCCCGAAAGGTTTAAGAAATGTCCTCGTGATCCCACCGTTGACTCCGAAACTCTGGTCGAATTGTTTGGTGGTTGTATTACTTCTTATGTTCCTTTTCGTTTTTTTGATTTATCGGATATGGATGATCATGACTACTAA

Coding sequence (CDS)

ATGTTCATAATTCTGCTCAAGTTAGGCGCCATTGATATTCTATGCAACGTTCAAAACGTCTGCTCTTCTTGGCGTAGGATCTGCAGGGACCCTAGCTTGTGGCGTGTTGTCGATCTTCACAATTTCCGTAACCGGTTCGGCATGGTTTACGATTTGGAGATGATGTGTAGGCAGGCTGTTGATTATAGTTGTGGCCAATTGCTTGATATCAGTATTGACTACTTTGGCACTGATAACTTGCTCCTCCATATCTCTCGCACAAGACTCCGGGTTTTATCTTCCTTTAAAATCTCCCCAAATGGATTGACTAAAGCAGTTTCAAAATTTCCATTATTGTTGGAACATCTCGAAATCTCTGACACAGAATTTTGTGTGGAAACTTTGGGAACTGTTGGATGGTGTAGTCCACATTTGAAGTCTCTAAACCTCAATTACAGAAAATACCATCTATTTGAATGTGATCTGGAAGCCGAGGCTATTGCTGAATATATGCCTAATTTGCATAGCCTTCAGATATGTTGCGGCCCTCTAACTGACAAGGGCTTGGAAGCCATTCTTTATGGTTGTCCTCATTTAGAATCTCTTGATTTACGCCTGTGTTTCAATTTACATTATGCCGAGCCATCGCAAATACATTGTCCCGAAAGGTTTAAGAAATGTCCTCGTGATCCCACCGTTGACTCCGAAACTCTGGTCGAATTGTTTGGTGGTTGTATTACTTCTTATGTTCCTTTTCGTTTTTTTGATTTATCGGATATGGATGATCATGACTACTAA

Protein sequence

MFIILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYSCGQLLDISIDYFGTDNLLLHISRTRLRVLSSFKISPNGLTKAVSKFPLLLEHLEISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPLTDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFKKCPRDPTVDSETLVELFGGCITSYVPFRFFDLSDMDDHDY
Homology
BLAST of Sed0023820 vs. NCBI nr
Match: KAG6581459.1 (F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.9 bits (629), Expect = 1.9e-61
Identity = 135/239 (56.49%), Postives = 164/239 (68.62%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLG +DIL N Q+VCSSWR+IC DP +WRVVD+    + + M YDLE MCRQAVD 
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDYDLEEMCRQAVDR 88

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCGQL+ I+I++FGTD+LL +I+++     +LR++   +IS  GL KAVSK P LLE LE
Sbjct: 89  SCGQLIYINIEHFGTDDLLQYITQSSNELRKLRLVYCNRISDEGLIKAVSKLP-LLEDLE 148

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPL 182
           IS   F VETL T+G C P LKSL LN + Y   ECD  A AIAE MPNL  LQI    L
Sbjct: 149 ISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGNSL 208

Query: 183 TDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 235
           T++GLEAIL GCP LESLDLR CFNL+ A      C E+ K  + P DPT D E   E+
Sbjct: 209 TNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRLPHDPTDDYEYSTEI 266

BLAST of Sed0023820 vs. NCBI nr
Match: KAG7034751.1 (Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.9 bits (629), Expect = 1.9e-61
Identity = 135/239 (56.49%), Postives = 164/239 (68.62%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLG +DIL N Q+VCSSWR+IC DP +WRVVD+    + + M YDLE MCRQAVD 
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDYDLEEMCRQAVDR 88

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCGQL+ I+I++FGTD+LL +I+++     +LR++   +IS  GL KAVSK P LLE LE
Sbjct: 89  SCGQLIYINIEHFGTDDLLQYITQSSNQLRKLRLVYCNRISDEGLIKAVSKLP-LLEDLE 148

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPL 182
           IS   F VETL T+G C P LKSL LN + Y   ECD  A AIAE MPNL  LQI    L
Sbjct: 149 ISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGNSL 208

Query: 183 TDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 235
           T++GLEAIL GCP LESLDLR CFNL+ A      C E+ K  + P DPT D E   E+
Sbjct: 209 TNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRLPHDPTDDYEFSTEI 266

BLAST of Sed0023820 vs. NCBI nr
Match: XP_023543623.1 (F-box protein SKIP19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.5 bits (628), Expect = 2.5e-61
Identity = 135/239 (56.49%), Postives = 164/239 (68.62%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLG +DIL N Q+VCSSWR+IC DP +WRVVD+    + + M YDLE MCRQAVD 
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDYDLEEMCRQAVDR 88

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCGQL+ I+I++FGTD+LL +I+++     +LR++   +IS  GL KAVSK P LLE LE
Sbjct: 89  SCGQLIYINIEHFGTDDLLHYITQSSNQLRKLRLVYCNRISDEGLIKAVSKLP-LLEDLE 148

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPL 182
           IS   F VETL T+G C P LKSL LN + Y   ECD  A AIAE MPNL  LQI    L
Sbjct: 149 ISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGNSL 208

Query: 183 TDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 235
           T++GLEAIL GCP LESLDLR CFNL+ A      C E+ K  + P DPT D E   E+
Sbjct: 209 TNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRLPHDPTDDYEFSTEI 266

BLAST of Sed0023820 vs. NCBI nr
Match: XP_022925897.1 (F-box protein SKIP19-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 245.7 bits (626), Expect = 4.2e-61
Identity = 135/239 (56.49%), Postives = 162/239 (67.78%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLG +DIL N Q+VCSSWR+IC DP +WRVVD+    + + M YDLE MCRQAVD 
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDYDLEEMCRQAVDR 88

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCGQL+ I I++FGTD+LL +I+++      LR++   +IS  GL KAVSK P LLE LE
Sbjct: 89  SCGQLIYIKIEHFGTDDLLQYITQSSNQLRELRLVYCNRISDEGLIKAVSKLP-LLEDLE 148

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPL 182
           IS   F VETL T+G C P LKSL LN + Y   ECD  A AIAE MPNL  LQI    L
Sbjct: 149 ISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGNSL 208

Query: 183 TDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 235
           T++GLEAIL GCP LESLDLR CFNL+ A      C E+ K  + P DPT D E   E+
Sbjct: 209 TNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRLPHDPTDDYEFSTEI 266

BLAST of Sed0023820 vs. NCBI nr
Match: XP_022925898.1 (F-box protein SKIP19-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 245.7 bits (626), Expect = 4.2e-61
Identity = 135/239 (56.49%), Postives = 162/239 (67.78%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLG +DIL N Q+VCSSWR+IC DP +WRVVD+    + + M YDLE MCRQAVD 
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDYDLEEMCRQAVDR 88

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCGQL+ I I++FGTD+LL +I+++      LR++   +IS  GL KAVSK P LLE LE
Sbjct: 89  SCGQLIYIKIEHFGTDDLLQYITQSSNQLRELRLVYCNRISDEGLIKAVSKLP-LLEDLE 148

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPL 182
           IS   F VETL T+G C P LKSL LN + Y   ECD  A AIAE MPNL  LQI    L
Sbjct: 149 ISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGNSL 208

Query: 183 TDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 235
           T++GLEAIL GCP LESLDLR CFNL+ A      C E+ K  + P DPT D E   E+
Sbjct: 209 TNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRLPHDPTDDYEFSTEI 266

BLAST of Sed0023820 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.9e-51
Identity = 112/236 (47.46%), Postives = 148/236 (62.71%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           ILL+LGAI+IL N Q VC  W R+C+DPS+WR +D+ N  +R    YDLE MCR AVD S
Sbjct: 192 ILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRS 251

Query: 64  CGQLLDISIDYFGTDNLLLHI-----SRTRLRVLSSFKISPNGLTKAVSKFPLLLEHLEI 123
            G L++I I Y+GT++L+++I     +   L ++  F I+  G+ KAVSK P LLE+LE+
Sbjct: 252 HGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVP-LLEYLEV 311

Query: 124 SDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFE---CDLEAEAIAEYMPNLHSLQICCG 183
           S   F  E+L  +G   P+LK+L LN     +F     D  A+AIAE MP L  LQ+   
Sbjct: 312 SYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGN 371

Query: 184 PLTDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSE 230
            LT+KGL AIL GCPHLE LDLR CFN++     +  C ER K  +CP D   DS+
Sbjct: 372 GLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCPNDSDDDSD 426

BLAST of Sed0023820 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.3e-48
Identity = 115/259 (44.40%), Postives = 155/259 (59.85%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           IL +LGAI+IL N Q VC SWRR+C+DPS+WR +D+HN  +   M Y+LE+MCR AVD S
Sbjct: 30  ILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRS 89

Query: 64  CGQLLDISIDYFGTDNLLLHISR-----TRLRVLSSFKISPNGLTKAVSKFPLLLEHLEI 123
            G L+DI I YFGT +LL +I+        LR++   +I+ +G  +AV K P  LE LE+
Sbjct: 90  QGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLP--LEELEL 149

Query: 124 SDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPLT 183
           S   F VE+L  VG C  ++K+L LN  K+   E D +A AIAE MP L  LQ+C   L+
Sbjct: 150 SYCSFSVESLRVVGQCCLNMKTLKLN--KHPQKENDDDALAIAETMPKLRHLQLCGNGLS 209

Query: 184 DKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFKKCPRDPTVDSETLVELFGGC 243
           D GL AIL  C +LE LDLR CFN++     Q  C E   K  R P   ++++ ++  G 
Sbjct: 210 DTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESV-KVVRHP---NDSIHDIDIGS 269

Query: 244 ITSYVPFRFFDLSDMDDHD 258
                P+ F D+  M   D
Sbjct: 270 SEDEDPYDFSDIDLMSGDD 280

BLAST of Sed0023820 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39
Identity = 102/245 (41.63%), Postives = 138/245 (56.33%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           ILL+L  ++IL N + VC SWRR+ +DP +WR +D+ N R R   +Y +E  CR  VD S
Sbjct: 38  ILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLR-RLYCIYAMEACCRHVVDLS 97

Query: 64  CGQLLDISIDY--FGTDNLLLHISR-----TRLRVLSSFKISPNGLTKAVSKFPLLLEHL 123
            G LL+ +ID   F T +LL +++       RLRV    +I+  G+ +A+ K P LLE L
Sbjct: 98  QGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKGG-QITSVGIFEAIVKLP-LLEEL 157

Query: 124 EISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGP 183
           E+       E   T+G   P+LK+L L     HL E D +A AIA+ MP L  LQ+    
Sbjct: 158 ELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAIADTMPGLLHLQLISNG 217

Query: 184 LTDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 240
           LT+ GL AIL GCPHLE LDLR CFN++     +  C ER K  +CP D   D   ++  
Sbjct: 218 LTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCPNDVLDDYNYVIFS 277

BLAST of Sed0023820 vs. ExPASy Swiss-Prot
Match: Q9M0U8 (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.0e-38
Identity = 104/248 (41.94%), Postives = 133/248 (53.63%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           ILL+L   DIL N Q VC  WRRIC+DPS+WR +   N R+     +D   MCR  VD S
Sbjct: 57  ILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMYNFDFVSMCRHIVDLS 116

Query: 64  CGQLLDISID-YFGTDNLLLHISRTRLRVLSSFKISPN----GLTKAVSKFPLLLEHLEI 123
            G LL+I++D +F +D+LL +I+   LR L      P     G+  A++K P LLE LE+
Sbjct: 117 QGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGMCFPRVTKLGVVNAIAKIP-LLETLEV 176

Query: 124 SDTEFCVE-TLGTVGWCSPHLKSLNLN--------YRKYHL--------FECDLEAEAIA 183
             T  C++  L  +G   P LK+L LN          KY           ECD +A AIA
Sbjct: 177 --THSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIA 236

Query: 184 EYMPNLHSLQICCGPLTDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFKKC- 228
           E MP LH LQ+    LT+ GL AIL GCPHLE LD+R CF +      +  C E  K+  
Sbjct: 237 ESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELR 296

BLAST of Sed0023820 vs. ExPASy Swiss-Prot
Match: Q9M0U7 (Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE=4 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 6.4e-36
Identity = 100/245 (40.82%), Postives = 132/245 (53.88%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           ILL+L   DIL N + +C +WRRIC+DPS+WR +   N R+     +D E MCR  VD S
Sbjct: 51  ILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRDCLMYEFDFESMCRHIVDLS 110

Query: 64  CGQLLDISIDYFGTDNLLLHISRTRLRVLSSFKIS------PNGLTKAVSKFPLLLEHLE 123
            G LL+I+I++F +D+LL +I   R   L S  IS        G+   + K P LLE L 
Sbjct: 111 QGGLLEINIEHFVSDSLLSYIV-DRSCNLKSLGISIYEPMTNKGVMNGIEKLP-LLETLV 170

Query: 124 ISDTEFCVETLGTVGWCSPHLKSLNLN------------YRKYHLFECDLEAEAIAEYMP 183
           I  +   ++ L  +G   P LK+L LN                 L ECD +A AIAE MP
Sbjct: 171 IFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMP 230

Query: 184 NLHSLQICCGPLTDKGLEAILYGCPHLES-LDLRLCFNLHYAEPSQIHCPERFKKC--PR 228
            L  LQ+    LT+ GL AIL GCPHLE  LD+R CFN++     +  C +R K+   P 
Sbjct: 231 KLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRRPH 289

BLAST of Sed0023820 vs. ExPASy TrEMBL
Match: A0A6J1EGI8 (F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 135/239 (56.49%), Postives = 162/239 (67.78%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLG +DIL N Q+VCSSWR+IC DP +WRVVD+    + + M YDLE MCRQAVD 
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDYDLEEMCRQAVDR 88

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCGQL+ I I++FGTD+LL +I+++      LR++   +IS  GL KAVSK P LLE LE
Sbjct: 89  SCGQLIYIKIEHFGTDDLLQYITQSSNQLRELRLVYCNRISDEGLIKAVSKLP-LLEDLE 148

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPL 182
           IS   F VETL T+G C P LKSL LN + Y   ECD  A AIAE MPNL  LQI    L
Sbjct: 149 ISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGNSL 208

Query: 183 TDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 235
           T++GLEAIL GCP LESLDLR CFNL+ A      C E+ K  + P DPT D E   E+
Sbjct: 209 TNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRLPHDPTDDYEFSTEI 266

BLAST of Sed0023820 vs. ExPASy TrEMBL
Match: A0A6J1ECV6 (F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 135/239 (56.49%), Postives = 162/239 (67.78%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLG +DIL N Q+VCSSWR+IC DP +WRVVD+    + + M YDLE MCRQAVD 
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDYDLEEMCRQAVDR 88

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCGQL+ I I++FGTD+LL +I+++      LR++   +IS  GL KAVSK P LLE LE
Sbjct: 89  SCGQLIYIKIEHFGTDDLLQYITQSSNQLRELRLVYCNRISDEGLIKAVSKLP-LLEDLE 148

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPL 182
           IS   F VETL T+G C P LKSL LN + Y   ECD  A AIAE MPNL  LQI    L
Sbjct: 149 ISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGNSL 208

Query: 183 TDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 235
           T++GLEAIL GCP LESLDLR CFNL+ A      C E+ K  + P DPT D E   E+
Sbjct: 209 TNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRLPHDPTDDYEFSTEI 266

BLAST of Sed0023820 vs. ExPASy TrEMBL
Match: A0A6J1ILH5 (F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.7e-61
Identity = 134/239 (56.07%), Postives = 163/239 (68.20%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLG +DIL N Q+VCSSWR+IC DP +WRVVD+    + + M YDLE MCRQAVD 
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDYDLEEMCRQAVDR 88

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCGQL+ I+I++FGTD+LL +I+++     +LR++   +IS  G  KAVSK P LLE LE
Sbjct: 89  SCGQLIYINIEHFGTDDLLQYITQSSNQLRKLRLVYCNRISDEGFIKAVSKLP-LLEDLE 148

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPL 182
           IS   F VETL T+G C P LKSL LN + Y   ECD  A AIAE MPNL  LQI    L
Sbjct: 149 ISFGSFDVETLETLGHCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGNSL 208

Query: 183 TDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 235
           T++GLEAIL GCP LESLDLR CFNL+ A      C E+ K  + P DPT D E   E+
Sbjct: 209 TNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRLPHDPTDDYEFSTEI 266

BLAST of Sed0023820 vs. ExPASy TrEMBL
Match: A0A6J1KRP9 (F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111497031 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 6.0e-61
Identity = 133/245 (54.29%), Postives = 171/245 (69.80%), Query Frame = 0

Query: 1   MFIILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYD--LEMMCRQ 60
           M  ILLKL A DIL NVQNVCSSWRRIC+DP LWRVVD+H   +R  +  D   EMMC Q
Sbjct: 22  MTTILLKLCAFDILVNVQNVCSSWRRICKDPFLWRVVDIHFMDSRVQLRTDRFAEMMCMQ 81

Query: 61  AVDYSCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLL 120
           AV+ SCGQL+DI+I++FGTD+LLLHIS++     RLR++    IS +G+TKA  KFP  L
Sbjct: 82  AVNLSCGQLVDINIEFFGTDDLLLHISQSSKRLRRLRIVCCSDISADGITKAALKFP-SL 141

Query: 121 EHLEISDTEFCVETLGTVGWCSPHLKSLNLNY-RKYHLFECDLEAEAIAEYMPNLHSLQI 180
           +HLEIS + +C++TL TVG C P LK+L LNY R+   FE D EA AIAE MPNL +LQI
Sbjct: 142 QHLEISGSAYCLKTLATVGCCCPRLKTLKLNYNRRRSEFERDEEALAIAENMPNLRNLQI 201

Query: 181 CCGPLTDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSET 236
               LT+ GL+AIL GCPHLE LDLR C+++ +A    + C  + K  + P +   +S++
Sbjct: 202 RGNLLTEWGLQAILDGCPHLEYLDLRWCYHIGFAGQMNLLCSGKIKSFRLPGESFDESDS 261

BLAST of Sed0023820 vs. ExPASy TrEMBL
Match: A0A6J1CXS5 (F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 138/270 (51.11%), Postives = 176/270 (65.19%), Query Frame = 0

Query: 3   IILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDY 62
           +ILLKLGAI+IL + Q+VCS WR+IC+DP +WRVVD+HN    + M YDLE MC QAVD 
Sbjct: 24  MILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNM-GEWDMDYDLEQMCIQAVDR 83

Query: 63  SCGQLLDISIDYFGTDNLLLHISRT-----RLRVLSSFKISPNGLTKAVSKFPLLLEHLE 122
           SCG+L+DI+I YFGT+ LL +I+++     RLR++    I+  GL++AVSK P LLEHLE
Sbjct: 84  SCGELIDINIQYFGTNELLQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLP-LLEHLE 143

Query: 123 ISDTEFCVETLGTVGWCSPHLKSLNLNYR--KYHLFECDLEAEAIAEYMPNLHSLQICCG 182
           IS   F  +TL TVG C   LKSL L+ +  +  + +CD +A AIAE MPNL  LQI   
Sbjct: 144 ISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGS 203

Query: 183 PLTDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVE 242
            LTD+GL+AIL GCP LESLDLR CFNL       + C ER K  + P DPT D E +VE
Sbjct: 204 SLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVE 263

Query: 243 LFG----GCITSYVPFRFFDLSDM-DDHDY 259
             G      +    P  F D+  + +D DY
Sbjct: 264 TDGFGDDDSLDEDYPSGFSDIDFLTEDDDY 291

BLAST of Sed0023820 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-49
Identity = 115/259 (44.40%), Postives = 155/259 (59.85%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           IL +LGAI+IL N Q VC SWRR+C+DPS+WR +D+HN  +   M Y+LE+MCR AVD S
Sbjct: 30  ILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRS 89

Query: 64  CGQLLDISIDYFGTDNLLLHISR-----TRLRVLSSFKISPNGLTKAVSKFPLLLEHLEI 123
            G L+DI I YFGT +LL +I+        LR++   +I+ +G  +AV K P  LE LE+
Sbjct: 90  QGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLP--LEELEL 149

Query: 124 SDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGPLT 183
           S   F VE+L  VG C  ++K+L LN  K+   E D +A AIAE MP L  LQ+C   L+
Sbjct: 150 SYCSFSVESLRVVGQCCLNMKTLKLN--KHPQKENDDDALAIAETMPKLRHLQLCGNGLS 209

Query: 184 DKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFKKCPRDPTVDSETLVELFGGC 243
           D GL AIL  C +LE LDLR CFN++     Q  C E   K  R P   ++++ ++  G 
Sbjct: 210 DTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESV-KVVRHP---NDSIHDIDIGS 269

Query: 244 ITSYVPFRFFDLSDMDDHD 258
                P+ F D+  M   D
Sbjct: 270 SEDEDPYDFSDIDLMSGDD 280

BLAST of Sed0023820 vs. TAIR 10
Match: AT4G05490.1 (RNI-like superfamily protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-40
Identity = 102/245 (41.63%), Postives = 138/245 (56.33%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           ILL+L  ++IL N + VC SWRR+ +DP +WR +D+ N R R   +Y +E  CR  VD S
Sbjct: 38  ILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLR-RLYCIYAMEACCRHVVDLS 97

Query: 64  CGQLLDISIDY--FGTDNLLLHISR-----TRLRVLSSFKISPNGLTKAVSKFPLLLEHL 123
            G LL+ +ID   F T +LL +++       RLRV    +I+  G+ +A+ K P LLE L
Sbjct: 98  QGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKGG-QITSVGIFEAIVKLP-LLEEL 157

Query: 124 EISDTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICCGP 183
           E+       E   T+G   P+LK+L L     HL E D +A AIA+ MP L  LQ+    
Sbjct: 158 ELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAIADTMPGLLHLQLISNG 217

Query: 184 LTDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFK--KCPRDPTVDSETLVEL 240
           LT+ GL AIL GCPHLE LDLR CFN++     +  C ER K  +CP D   D   ++  
Sbjct: 218 LTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCPNDVLDDYNYVIFS 277

BLAST of Sed0023820 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.8e-39
Identity = 104/248 (41.94%), Postives = 133/248 (53.63%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           ILL+L   DIL N Q VC  WRRIC+DPS+WR +   N R+     +D   MCR  VD S
Sbjct: 57  ILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMYNFDFVSMCRHIVDLS 116

Query: 64  CGQLLDISID-YFGTDNLLLHISRTRLRVLSSFKISPN----GLTKAVSKFPLLLEHLEI 123
            G LL+I++D +F +D+LL +I+   LR L      P     G+  A++K P LLE LE+
Sbjct: 117 QGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGMCFPRVTKLGVVNAIAKIP-LLETLEV 176

Query: 124 SDTEFCVE-TLGTVGWCSPHLKSLNLN--------YRKYHL--------FECDLEAEAIA 183
             T  C++  L  +G   P LK+L LN          KY           ECD +A AIA
Sbjct: 177 --THSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIA 236

Query: 184 EYMPNLHSLQICCGPLTDKGLEAILYGCPHLESLDLRLCFNLHYAEPSQIHCPERFKKC- 228
           E MP LH LQ+    LT+ GL AIL GCPHLE LD+R CF +      +  C E  K+  
Sbjct: 237 ESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELR 296

BLAST of Sed0023820 vs. TAIR 10
Match: AT4G05475.1 (RNI-like superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 4.5e-37
Identity = 100/245 (40.82%), Postives = 132/245 (53.88%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDLHNFRNRFGMVYDLEMMCRQAVDYS 63
           ILL+L   DIL N + +C +WRRIC+DPS+WR +   N R+     +D E MCR  VD S
Sbjct: 51  ILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRDCLMYEFDFESMCRHIVDLS 110

Query: 64  CGQLLDISIDYFGTDNLLLHISRTRLRVLSSFKIS------PNGLTKAVSKFPLLLEHLE 123
            G LL+I+I++F +D+LL +I   R   L S  IS        G+   + K P LLE L 
Sbjct: 111 QGGLLEINIEHFVSDSLLSYIV-DRSCNLKSLGISIYEPMTNKGVMNGIEKLP-LLETLV 170

Query: 124 ISDTEFCVETLGTVGWCSPHLKSLNLN------------YRKYHLFECDLEAEAIAEYMP 183
           I  +   ++ L  +G   P LK+L LN                 L ECD +A AIAE MP
Sbjct: 171 IFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMP 230

Query: 184 NLHSLQICCGPLTDKGLEAILYGCPHLES-LDLRLCFNLHYAEPSQIHCPERFKKC--PR 228
            L  LQ+    LT+ GL AIL GCPHLE  LD+R CFN++     +  C +R K+   P 
Sbjct: 231 KLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRRPH 289

BLAST of Sed0023820 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 89/210 (42.38%), Postives = 124/210 (59.05%), Query Frame = 0

Query: 4   ILLKLGAIDILCNVQNVCSSWRRICRDPSLWRVVDL---HNFRNRFGMVYDLEMMCRQAV 63
           ILL+LGAI+IL N Q VC SWRR+C+DPS+WR +D+    N  N   + Y +E +C +AV
Sbjct: 32  ILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAV 91

Query: 64  DYSCGQLLDISIDYFGTDNLLLHI-----SRTRLRVLSSFKISPNGLTKAVSKFPLLLEH 123
           D S G LL+I+IDY    + L +I     +  RL V+    +   G+ +A  K P LLE 
Sbjct: 92  DLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLP-LLEE 151

Query: 124 LEIS-DTEFCVETLGTVGWCSPHLKSLNLNYRKYHLFECDLEAEAIAEYMPNLHSLQICC 183
           L+I+  +    + L  VG   P+L++L LN     +  CD  A AIAE MP L  LQ+  
Sbjct: 152 LDITYKSSIREQELKVVGQSCPNLRTLKLNCTG-DVKCCDKVALAIAETMPGLRHLQLFR 211

Query: 184 GPLTDKGLEAILYGCPHLESLDLRLCFNLH 205
             L++ GL AIL GCPHL++L L  C N++
Sbjct: 212 NGLSETGLNAILEGCPHLKNLGLHQCLNIN 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6581459.11.9e-6156.49F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7034751.11.9e-6156.49Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subs... [more]
XP_023543623.12.5e-6156.49F-box protein SKIP19-like [Cucurbita pepo subsp. pepo][more]
XP_022925897.14.2e-6156.49F-box protein SKIP19-like isoform X1 [Cucurbita moschata][more]
XP_022925898.14.2e-6156.49F-box protein SKIP19-like isoform X2 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9S9V91.9e-5147.46Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE... [more]
Q9M0U93.3e-4844.40F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1[more]
Q9M0U61.6e-3941.63Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE... [more]
Q9M0U84.0e-3841.94Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE... [more]
Q9M0U76.4e-3640.82Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE... [more]
Match NameE-valueIdentityDescription
A0A6J1EGI82.1e-6156.49F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114331... [more]
A0A6J1ECV62.1e-6156.49F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114331... [more]
A0A6J1ILH52.7e-6156.07F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1[more]
A0A6J1KRP96.0e-6154.29F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111497031 PE=4 SV=1[more]
A0A6J1CXS51.3e-6051.11F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT4G05460.12.3e-4944.40RNI-like superfamily protein [more]
AT4G05490.11.2e-4041.63RNI-like superfamily protein [more]
AT4G05470.12.8e-3941.94RNI-like superfamily protein [more]
AT4G05475.14.5e-3740.82RNI-like superfamily protein [more]
AT4G05497.11.3e-3642.38RNI-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 14..39
e-value: 1.1E-5
score: 25.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 2..238
e-value: 7.8E-24
score: 86.2
NoneNo IPR availablePANTHERPTHR38926F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 2..226
NoneNo IPR availablePANTHERPTHR38926:SF2F-BOX/LRR-REPEAT PROTEIN 21-RELATEDcoord: 2..226
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 13..211

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0023820.1Sed0023820.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding