Sed0023819 (gene) Chayote v1

Overview


Name	Sed0023819
Type	gene
Organism	Sechium edule (Chayote v1)
Description	hybrid signal transduction histidine kinase L
Location	LG06: 41175262 .. 41177090 (-)
RNA-Seq Expression	Sed0023819
Synteny	Sed0023819

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTGCTTTGTGGTGGCAAATAGAAATTGCTACTCTAATCCCAATGTTGAACTGCATAATCTTTTTTCTTTATTTTATTTTTTTTCGAAATAAACAATTCAGATTTGAGACCCACAATCAATTTGTCTCTTTTGTTCTTATGTCTAAAAAGTAACATCTCCTCCCCTCCAATCACTGTCCGTGTCTCCCTTTTTACTGGTTCCATCACTTAATGGTTAAACACCTTAAACTTTGTTTAAGCCAAAAGTTACCGAGGTTCTATAGCATTATGTACAACTTAGTAATCATGATATTAGAAGTTTTTATCTCCTTTCCCTAAATGTTGTTGAATAAAAAAAACACGCTAAAATTTTGTTGAGAGCAATAGCTCAATCAGCATAAGTGTGTCAATGACAAAGAGGTTATGAATTCGATCTATTCGCCTCAAATAATTGTTGAACTAAAATAAAAATAGTGCCTGATAACATAAGGTTTTTTTTGTTGGTTTAACCTATTTGGAGATTGAAAGATTCGAATTCACGAACTCTTGTTCAAAATACATGTTTTGATTAAACGTGTTTTGACACTCTCAACAAAAGGTTAGCTCAAATGTCTCGAGTTCGAGACTCACATGTGACATTACTTTTTTTATGTTTCTAGTGTCTGGCCTAGTGATAGGCGTGGTTACCCTTGTTTCAGAAGATTAACTCAAATGATGCAAAGTATGGACGTGTAACTTAGTGGTTATAGGTTCAAATCTTAGAAGAAAGAAAAAGGATGGAGAATGACACCTCTTCAAAAAAAATCTTTAAATAGTTGTGATTTTGAATGTGCCAAACTCTATCTTTATTCCTTTTATATAAATCTCCATCAATATAATCATAAATCAATCTACCATTTCTTCCCTTCAACAAAAGAAGAAAAATAAAACACCCCAAGGAATATATTTAGCTCTCTTTTCAAAAAGAAAGTTCCTCCCTTTTTGACCTCTTTCCTTTCTCTTCCCCCAAACTCCAATTCTCTTAGAATCACATTCATTTATACAAACATAACCCTCTTCTTGTTGTTGCTTCCTTCATCAGTAAAGTCCTCATCTCTCCCTTCCCTTCTAAAATACCAATCCTTCTTCCTTATTTTCTCCTAATCCAATATCCGATACCTTGCCGACATGTCGGAGTTTCAACAACAACAACAACCGCAACAACAACAACTTCAGCCACAGCAGCCAGCTTTGGTTTATCCGAACACCGCTGCGGCCAGCCAGCCTCCTTCCCACCACCATTCCAGCGGCTCCTTCGGAGGCGTTTTCATAGTTCTCGGCGTCATTGTCGTCATATCATCTCTTGCTTGCTTCCTCGGCCGCCTCTGCAACCGGCGAGTCCAAAACCAGAGGCCGAAGCCCGAGAAGACCCACGGCGGCGCTCGGCCTAAAGGAAAACAACCCAACTTGCATCCGGACAAAGGAGGAGATGTAGAATTTGGAATTGATTTCAGAAACCCAAGTGGGAAAGGCAAATTCCCACCTGAAGCAAATGGAGGAATTAGCAAAGGCAAAGCCAACGGCCATGGAAACAGCAACGGCCATGGAAATAGCTTCAAATCCTTTGAAAATGGCGGCGAAATCAAACATAATGATCATCACGAAGTAGATTTCAACTTTAAAGCTGCAGGACATGCTTGATTTCAACTTCAAGTTATAGCTGTGTGGATTTTTCCTCTTGTTATTTTTTCTTTGTTTGTTCTTCGTTCTTTTCTTTTTTTTGACTTGATCTTTGTTGTTATCTAATGAAAAGCTTCAATTTGATCATTAATCTGTGATGATATTCAATGGGTGCTGTTGAATTCATGG

mRNA sequence

CTTCTGCTTTGTGGTGGCAAATAGAAATTGCTACTCTAATCCCAATGTTGAACTGCATAATCTTTTTTCTTTATTTTATTTTTTTTCGAAATAAACAATTCAGATTTGAGACCCACAATCAATTTGTCTCTTTTGTTCTTATGTCTAAAAAGTAACATCTCCTCCCCTCCAATCACTGTCCGTGTCTCCCTTTTTACTGGTTCCATCACTTAATGGTTAAACACCTTAAACTTTGTTTAAGCCAAAAGTTACCGAGGTTCTATAGCATTATGTACAACTTAGTAATCATGATATTAGAAGTTTTTATCTCCTTTCCCTAAATGTTGTTGAATAAAAAAAACACGCTAAAATTTTGTTGAGAGCAATAGCTCAATCAGCATAAGTGTGTCAATGACAAAGAGGTTATGAATTCGATCTATTCGCCTCAAATAATTGTTGAACTAAAATAAAAATAGTGCCTGATAACATAAGGTTTTTTTTGTTGGTTTAACCTATTTGGAGATTGAAAGATTCGAATTCACGAACTCTTGTTCAAAATACATGTTTTGATTAAACGTGTTTTGACACTCTCAACAAAAGGTTAGCTCAAATGTCTCGAGTTCGAGACTCACATGTGACATTACTTTTTTTATGTTTCTAGTGTCTGGCCTAGTGATAGGCGTGGTTACCCTTGTTTCAGAAGATTAACTCAAATGATGCAAAGTATGGACGTGTAACTTAGTGGTTATAGGTTCAAATCTTAGAAGAAAGAAAAAGGATGGAGAATGACACCTCTTCAAAAAAAATCTTTAAATAGTTGTGATTTTGAATGTGCCAAACTCTATCTTTATTCCTTTTATATAAATCTCCATCAATATAATCATAAATCAATCTACCATTTCTTCCCTTCAACAAAAGAAGAAAAATAAAACACCCCAAGGAATATATTTAGCTCTCTTTTCAAAAAGAAAGTTCCTCCCTTTTTGACCTCTTTCCTTTCTCTTCCCCCAAACTCCAATTCTCTTAGAATCACATTCATTTATACAAACATAACCCTCTTCTTGTTGTTGCTTCCTTCATCAGTAAAGTCCTCATCTCTCCCTTCCCTTCTAAAATACCAATCCTTCTTCCTTATTTTCTCCTAATCCAATATCCGATACCTTGCCGACATGTCGGAGTTTCAACAACAACAACAACCGCAACAACAACAACTTCAGCCACAGCAGCCAGCTTTGGTTTATCCGAACACCGCTGCGGCCAGCCAGCCTCCTTCCCACCACCATTCCAGCGGCTCCTTCGGAGGCGTTTTCATAGTTCTCGGCGTCATTGTCGTCATATCATCTCTTGCTTGCTTCCTCGGCCGCCTCTGCAACCGGCGAGTCCAAAACCAGAGGCCGAAGCCCGAGAAGACCCACGGCGGCGCTCGGCCTAAAGGAAAACAACCCAACTTGCATCCGGACAAAGGAGGAGATGTAGAATTTGGAATTGATTTCAGAAACCCAAGTGGGAAAGGCAAATTCCCACCTGAAGCAAATGGAGGAATTAGCAAAGGCAAAGCCAACGGCCATGGAAACAGCAACGGCCATGGAAATAGCTTCAAATCCTTTGAAAATGGCGGCGAAATCAAACATAATGATCATCACGAAGTAGATTTCAACTTTAAAGCTGCAGGACATGCTTGATTTCAACTTCAAGTTATAGCTGTGTGGATTTTTCCTCTTGTTATTTTTTCTTTGTTTGTTCTTCGTTCTTTTCTTTTTTTTGACTTGATCTTTGTTGTTATCTAATGAAAAGCTTCAATTTGATCATTAATCTGTGATGATATTCAATGGGTGCTGTTGAATTCATGG

Coding sequence (CDS)

ATGTCGGAGTTTCAACAACAACAACAACCGCAACAACAACAACTTCAGCCACAGCAGCCAGCTTTGGTTTATCCGAACACCGCTGCGGCCAGCCAGCCTCCTTCCCACCACCATTCCAGCGGCTCCTTCGGAGGCGTTTTCATAGTTCTCGGCGTCATTGTCGTCATATCATCTCTTGCTTGCTTCCTCGGCCGCCTCTGCAACCGGCGAGTCCAAAACCAGAGGCCGAAGCCCGAGAAGACCCACGGCGGCGCTCGGCCTAAAGGAAAACAACCCAACTTGCATCCGGACAAAGGAGGAGATGTAGAATTTGGAATTGATTTCAGAAACCCAAGTGGGAAAGGCAAATTCCCACCTGAAGCAAATGGAGGAATTAGCAAAGGCAAAGCCAACGGCCATGGAAACAGCAACGGCCATGGAAATAGCTTCAAATCCTTTGAAAATGGCGGCGAAATCAAACATAATGATCATCACGAAGTAGATTTCAACTTTAAAGCTGCAGGACATGCTTGA

Protein sequence

MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVEFGIDFRNPSGKGKFPPEANGGISKGKANGHGNSNGHGNSFKSFENGGEIKHNDHHEVDFNFKAAGHA

Homology

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BLAST of Sed0023819 vs. NCBI nr
Match: XP_038892720.1 (uncharacterized protein LOC120081701 [Benincasa hispida])

HSP 1 Score: 236.1 bits (601), Expect = 2.2e-58
Identity = 134/181 (74.03%), Postives = 143/181 (79.01%), Query Frame = 0


Query: 1   MSEFQQQQQPQQQQLQPQQPALVYPNTAA--ASQPPSHHHSSGSFGGVFIVLGVIVVISS 60
           MSE QQQQQ Q QQ Q QQPA VYPNTAA   SQPP  HHS+GSFG VFIVL VIVVIS+
Sbjct: 1   MSELQQQQQQQPQQQQQQQPAFVYPNTAATVGSQPPPSHHSNGSFGAVFIVLAVIVVISA 60

Query: 61  LACFLGRLCNRRVQN-QRPKPEKTHGGARPKGKQPNLHPDKGGDVEFGIDFRNPSG-KGK 120
           LACFLGRLCNRRV+N QRPKPEKTH GARP+GK+P LHPDK GD+EFG D RNP+G KGK
Sbjct: 61  LACFLGRLCNRRVENGQRPKPEKTHSGARPRGKEPKLHPDKEGDIEFGFDLRNPNGNKGK 120

Query: 121 FPPEANGGISKGKANGHGNS----NGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAG 170
           FP     G SKGK+NG+GN     NGHGNSFK FENGG    EIKH DHHE DFNFKAAG
Sbjct: 121 FPSSGGNGGSKGKSNGNGNGTNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKAAG 180

[Close]

BLAST of Sed0023819 vs. NCBI nr
Match: XP_008446202.1 (PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo] >ADN33832.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0034312.1 hybrid signal transduction histidine kinase L [Cucumis melo var. makuwa] >TYK15608.1 hybrid signal transduction histidine kinase L [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.3e-55
Identity = 135/189 (71.43%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVI 60
           MSE QQQQ QPQQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVI
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNLHPDKGGDVEFGIDFRNPSGK 120
           S+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P LHPDK GD+EFG D RNPSGK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 GKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEV 170
           GKFPP  NG     G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE 
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEG 180

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BLAST of Sed0023819 vs. NCBI nr
Match: KAE8648720.1 (hypothetical protein Csa_008998 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 1.3e-53
Identity = 134/191 (70.16%), Postives = 143/191 (74.87%), Query Frame = 0


Query: 1   MSEFQQQ--QQPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVV 60
           MSE QQQ  QQ QQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVV
Sbjct: 1   MSELQQQQPQQQQQQQQQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVV 60

Query: 61  ISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNLHPDKGGDVEFGIDFRNPSG 120
           IS+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P LHPDK GD+EFG D RNPSG
Sbjct: 61  ISALACFLGRLCNRRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSG 120

Query: 121 KGKFPPEANG------GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHH 170
           KGKFP   NG      G SKGK NG+G       NGHGNSFK FENGG    EIKH DHH
Sbjct: 121 KGKFPSGGNGSTGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHH 180

[Close]

BLAST of Sed0023819 vs. NCBI nr
Match: XP_011655621.2 (la-related protein Larp4B [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 1.3e-53
Identity = 134/191 (70.16%), Postives = 143/191 (74.87%), Query Frame = 0


Query: 1   MSEFQQQ--QQPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVV 60
           MSE QQQ  QQ QQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVV
Sbjct: 1   MSELQQQQPQQQQQQQQQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVV 60

Query: 61  ISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNLHPDKGGDVEFGIDFRNPSG 120
           IS+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P LHPDK GD+EFG D RNPSG
Sbjct: 61  ISALACFLGRLCNRRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSG 120

Query: 121 KGKFPPEANG------GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHH 170
           KGKFP   NG      G SKGK NG+G       NGHGNSFK FENGG    EIKH DHH
Sbjct: 121 KGKFPSGGNGSTGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHH 180

[Close]

BLAST of Sed0023819 vs. NCBI nr
Match: XP_022945533.1 (uncharacterized protein LOC111449741 [Cucurbita moschata])

HSP 1 Score: 218.8 bits (556), Expect = 3.7e-53
Identity = 123/175 (70.29%), Postives = 137/175 (78.29%), Query Frame = 0


Query: 1   MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLA 60
           MSEFQQQQQPQQ Q QPQQ ALVYP++ A  +PP  HHS+GSFG VFIVL VIVV+S+LA
Sbjct: 1   MSEFQQQQQPQQPQ-QPQQAALVYPSSTAGVKPPI-HHSNGSFGAVFIVLAVIVVLSALA 60

Query: 61  CFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVEFGIDFRNPSGKGKFPPE 120
           CFLGRLCNRRV NQR KPEKTHGG+  +GK+P LHPDK GD+EFG D RNP+GK  FPP 
Sbjct: 61  CFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPG 120

Query: 121 ANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHE-VDFNFKAAGHA 171
            NGG    K NG+GN N HGNSFK F+NGG    EIKH DHHE VD NF+A GHA
Sbjct: 121 GNGGY---KGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 170

[Close]

BLAST of Sed0023819 vs. ExPASy TrEMBL
Match: A0A5A7ST81 (Hybrid signal transduction histidine kinase L OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001050 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 135/189 (71.43%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVI 60
           MSE QQQQ QPQQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVI
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNLHPDKGGDVEFGIDFRNPSGK 120
           S+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P LHPDK GD+EFG D RNPSGK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 GKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEV 170
           GKFPP  NG     G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE 
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEG 180

[Close]

BLAST of Sed0023819 vs. ExPASy TrEMBL
Match: E5GBJ1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 135/189 (71.43%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVI 60
           MSE QQQQ QPQQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVI
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNLHPDKGGDVEFGIDFRNPSGK 120
           S+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P LHPDK GD+EFG D RNPSGK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 GKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEV 170
           GKFPP  NG     G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE 
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEG 180

[Close]

BLAST of Sed0023819 vs. ExPASy TrEMBL
Match: A0A1S3BF63 (hybrid signal transduction histidine kinase L OS=Cucumis melo OX=3656 GN=LOC103489006 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 135/189 (71.43%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVI 60
           MSE QQQQ QPQQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVI
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNLHPDKGGDVEFGIDFRNPSGK 120
           S+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P LHPDK GD+EFG D RNPSGK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 GKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEV 170
           GKFPP  NG     G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE 
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPIGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEG 180

[Close]

BLAST of Sed0023819 vs. ExPASy TrEMBL
Match: A0A6J1G163 (uncharacterized protein LOC111449741 OS=Cucurbita moschata OX=3662 GN=LOC111449741 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53
Identity = 123/175 (70.29%), Postives = 137/175 (78.29%), Query Frame = 0


Query: 1   MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLA 60
           MSEFQQQQQPQQ Q QPQQ ALVYP++ A  +PP  HHS+GSFG VFIVL VIVV+S+LA
Sbjct: 1   MSEFQQQQQPQQPQ-QPQQAALVYPSSTAGVKPPI-HHSNGSFGAVFIVLAVIVVLSALA 60

Query: 61  CFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVEFGIDFRNPSGKGKFPPE 120
           CFLGRLCNRRV NQR KPEKTHGG+  +GK+P LHPDK GD+EFG D RNP+GK  FPP 
Sbjct: 61  CFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKASFPPG 120

Query: 121 ANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHE-VDFNFKAAGHA 171
            NGG    K NG+GN N HGNSFK F+NGG    EIKH DHHE VD NF+A GHA
Sbjct: 121 GNGGY---KGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA 170

[Close]

BLAST of Sed0023819 vs. ExPASy TrEMBL
Match: A0A6J1HP92 (uncharacterized protein LOC111466471 OS=Cucurbita maxima OX=3661 GN=LOC111466471 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.9e-53
Identity = 120/174 (68.97%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 1   MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLA 60
           MSEFQQQQQ  QQ  QPQQ ALVYP++ A  +PPS HHS+GSFG VFIVL VIVV+S+LA
Sbjct: 1   MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPS-HHSNGSFGAVFIVLAVIVVLSALA 60

Query: 61  CFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVEFGIDFRNPSGKGKFPPE 120
           CFLGRLCNRRV NQR KPEKTHG +  +GK+P LHPDK GD+EFG D RNP+GK  FPP 
Sbjct: 61  CFLGRLCNRRVVNQRRKPEKTHGRSHSRGKEPKLHPDKEGDIEFGFDSRNPNGKATFPPG 120

Query: 121 ANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGHA 171
            NGG    K NG+ + N HGNSFK FENGG    EIKH DHHEVD NF+A GHA
Sbjct: 121 GNGGY---KGNGNDDGNSHGNSFKPFENGGEMRSEIKHADHHEVDINFRAGGHA 170

[Close]

BLAST of Sed0023819 vs. TAIR 10
Match: AT1G70470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits to 64 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 10; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 60/147 (40.82%), Postives = 75/147 (51.02%), Query Frame = 0


Query: 9   QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGR 68
           QPQ+ Q QPQ    VYP+T+   ++S  PS   SSGSFG  FIVL  I+V+++LAC  GR
Sbjct: 4   QPQEFQ-QPQ----VYPSTSSSTSSSFSPSSSGSSGSFGTAFIVLAAILVLAALACVFGR 63

Query: 69  LCNR-------RVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVEFGIDFRNPSGKGKFP 128
           LCNR       +  N+  K EK       + +     P + GDVEFG D + P    K P
Sbjct: 64  LCNRGGKQHKDKNNNKASKHEKPSSKKSREIRPVEREPRERGDVEFGFDMKRPGPMSK-P 123

Query: 129 PEANGG-ISKGKANGHGNSNGHGNSFK 145
              NGG I  G  N  G   G G   K
Sbjct: 124 TGRNGGDIEFGFDNKRGGGGGGGGGGK 144

[Close]

BLAST of Sed0023819 vs. TAIR 10
Match: AT1G23530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70470.1); Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 5.3e-10
Identity = 60/167 (35.93%), Postives = 77/167 (46.11%), Query Frame = 0


Query: 16  QPQQPALVYPNT------AAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNR 75
           Q QQP +VYPN         +++P S   SSG+FG VFIVL VI V+S+LAC  GRLCNR
Sbjct: 8   QMQQPIVVYPNAYNKQYPDPSTKPSSSSGSSGNFGTVFIVLAVIFVLSALACVFGRLCNR 67

Query: 76  ------RVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVEFGIDFRNPSGKGKFPPEANG 135
                 +  ++ PK EK       + +     P + GD++FG D + P    K P   +G
Sbjct: 68  ESRAAKQQHSKHPKHEKASSKKSREIRPVEREPRERGDMDFGFDMKRPEPIEK-PSGRDG 127

Query: 136 G--ISKGKANGHGNSNGHGNSFKSFENGGEIKHNDHHEVDFNFKAAG 169
           G  I  G  N  G     G        GG    N  H V F     G
Sbjct: 128 GEDIEFGFDNKRGERGREGGG-----GGGPPPPNIKHAVRFKLPENG 168

The following BLAST results are available for this feature:

BLAST of Sed0023819 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892720.1	2.2e-58	74.03	uncharacterized protein LOC120081701 [Benincasa hispida]	[more]
XP_008446202.1	2.3e-55	71.43	PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo] >ADN3383...	[more]
KAE8648720.1	1.3e-53	70.16	hypothetical protein Csa_008998 [Cucumis sativus]	[more]
XP_011655621.2	1.3e-53	70.16	la-related protein Larp4B [Cucumis sativus]	[more]
XP_022945533.1	3.7e-53	70.29	uncharacterized protein LOC111449741 [Cucurbita moschata]	[more]

BLAST of Sed0023819 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023819 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ST81	1.1e-55	71.43	Hybrid signal transduction histidine kinase L OS=Cucumis melo var. makuwa OX=119...	[more]
E5GBJ1	1.1e-55	71.43	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BF63	1.1e-55	71.43	hybrid signal transduction histidine kinase L OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1G163	1.8e-53	70.29	uncharacterized protein LOC111449741 OS=Cucurbita moschata OX=3662 GN=LOC1114497...	[more]
A0A6J1HP92	3.9e-53	68.97	uncharacterized protein LOC111466471 OS=Cucurbita maxima OX=3661 GN=LOC111466471...	[more]

BLAST of Sed0023819 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70470.1	2.4e-10	40.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G23530.1	5.3e-10	35.93	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..144
None	No IPR available	PANTHER	PTHR33429:SF7	OS02G0708000 PROTEIN	coord: 1..155
None	No IPR available	PANTHER	PTHR33429	OS02G0708000 PROTEIN-RELATED	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023819.1	Sed0023819.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane