Sed0023812 (gene) Chayote v1

Overview


Name	Sed0023812
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DUF4228 domain-containing protein
Location	LG11: 6242178 .. 6242859 (+)
RNA-Seq Expression	Sed0023812
Synteny	Sed0023812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTTTCTCCAAAACAAAAGGAGATTCATTTCCTTTTTTTCTCAAAATTAAGGAAATTTATTTCTTTTTTTTTTCTAGAAACCAAAACACCAAAATGGGTGGCTGTCTCTCCCGCCGACAACCCTCCGCCGTGTCCGCCGCCGTGAGCGCCGCCGACAAGGTCCAAGTGGTCCATCAGAACGGCCACGTCCAACTGTTTTCCACCCCCATCACGGCCCACCAGGTGGCCGAAAAGCGGCCGCCGCCGTCGGAGTACTTCCTGTGCACGGCGGCGATGCTGGTGTCCGTCGCCGGGAGCCCGGCGCTGAACCCCGACGCCGTTCTTCAGGCTGGGAAGGTTTATTTCATGCTCCCGCTCTCCACCCTCCATCCCGACGTTTCTCCCGCCGATCTGGCTTCCATCGCCAGAAGGCTCACCGCCGCCGCGAAGTCCGCCGCGAAGACCGGCCAGACGCGGCCGTGCGTGGTGGCTGGCGGCGGCGAATTGAAGGCTCCGGCGTCGGGGTCGGCGGCGAGGTCGAGACAGTGGCGGCCGGTTCTGGACACCATTAAGGAGAAGCCGATGATGATTAATAATCAATCAGATTTTGAAGACAAACATAATCATTTGTATGTTTATGAATCTAATTATCACGAATAATTTATTAAATTTCCTTTTTCTTTTCTTCCCTCAATCATCC

mRNA sequence

CTTCTTTTCTCCAAAACAAAAGGAGATTCATTTCCTTTTTTTCTCAAAATTAAGGAAATTTATTTCTTTTTTTTTTCTAGAAACCAAAACACCAAAATGGGTGGCTGTCTCTCCCGCCGACAACCCTCCGCCGTGTCCGCCGCCGTGAGCGCCGCCGACAAGGTCCAAGTGGTCCATCAGAACGGCCACGTCCAACTGTTTTCCACCCCCATCACGGCCCACCAGGTGGCCGAAAAGCGGCCGCCGCCGTCGGAGTACTTCCTGTGCACGGCGGCGATGCTGGTGTCCGTCGCCGGGAGCCCGGCGCTGAACCCCGACGCCGTTCTTCAGGCTGGGAAGGTTTATTTCATGCTCCCGCTCTCCACCCTCCATCCCGACGTTTCTCCCGCCGATCTGGCTTCCATCGCCAGAAGGCTCACCGCCGCCGCGAAGTCCGCCGCGAAGACCGGCCAGACGCGGCCGTGCGTGGTGGCTGGCGGCGGCGAATTGAAGGCTCCGGCGTCGGGGTCGGCGGCGAGGTCGAGACAGTGGCGGCCGGTTCTGGACACCATTAAGGAGAAGCCGATGATGATTAATAATCAATCAGATTTTGAAGACAAACATAATCATTTGTATGTTTATGAATCTAATTATCACGAATAATTTATTAAATTTCCTTTTTCTTTTCTTCCCTCAATCATCC

Coding sequence (CDS)

ATGGGTGGCTGTCTCTCCCGCCGACAACCCTCCGCCGTGTCCGCCGCCGTGAGCGCCGCCGACAAGGTCCAAGTGGTCCATCAGAACGGCCACGTCCAACTGTTTTCCACCCCCATCACGGCCCACCAGGTGGCCGAAAAGCGGCCGCCGCCGTCGGAGTACTTCCTGTGCACGGCGGCGATGCTGGTGTCCGTCGCCGGGAGCCCGGCGCTGAACCCCGACGCCGTTCTTCAGGCTGGGAAGGTTTATTTCATGCTCCCGCTCTCCACCCTCCATCCCGACGTTTCTCCCGCCGATCTGGCTTCCATCGCCAGAAGGCTCACCGCCGCCGCGAAGTCCGCCGCGAAGACCGGCCAGACGCGGCCGTGCGTGGTGGCTGGCGGCGGCGAATTGAAGGCTCCGGCGTCGGGGTCGGCGGCGAGGTCGAGACAGTGGCGGCCGGTTCTGGACACCATTAAGGAGAAGCCGATGATGATTAATAATCAATCAGATTTTGAAGACAAACATAATCATTTGTATGTTTATGAATCTAATTATCACGAATAA

Protein sequence

MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNHLYVYESNYHE

Homology

[Close]

BLAST of Sed0023812 vs. NCBI nr
Match: XP_011650123.1 (uncharacterized protein LOC105434722 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 6.4e-48
Identity = 109/156 (69.87%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MGGC+S R   + S A +AAD+VQVVH NGHVQ F +PITA QVA + PPP+EYF+CTAA
Sbjct: 1   MGGCISHR---SSSTAAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            LVS A SPALNPD VLQ GKVYF+LPLSTLHPDVS ADLASIARRLTAAAKSAAK+G  
Sbjct: 61  QLVSTAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSL 120

Query: 121 RPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKP 157
            PC  A GGE       +A +SRQWRP+LDTI+EKP
Sbjct: 121 PPCEAADGGE--DWRCTTAGKSRQWRPLLDTIREKP 151

[Close]

BLAST of Sed0023812 vs. NCBI nr
Match: XP_008460258.1 (PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK08883.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 8.4e-48
Identity = 111/157 (70.70%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MGGC+S R     S++ +AAD+VQVVH NGHVQ F +PITA QVA K PPP+EYF+CTAA
Sbjct: 1   MGGCVSLR-----SSSDAAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            LVS A SPAL+PDAVLQ GKVYF+LP STLHPDVS ADLASIARRLTAAAKSAAK+G  
Sbjct: 61  QLVSTAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSL 120

Query: 121 RPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP 157
            PC  A GG E K  A+G   +SRQWRP+LDTIKEKP
Sbjct: 121 PPCETAEGGEEWKCTAAG---KSRQWRPLLDTIKEKP 149

[Close]

BLAST of Sed0023812 vs. NCBI nr
Match: KAG7029841.1 (hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.4 bits (498), Expect = 2.1e-46
Identity = 108/172 (62.79%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MGGC+SRR     S+AV+AAD +Q+VH NGHVQ F +PITA QV    PPP+EYF+ TAA
Sbjct: 1   MGGCISRRS----SSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            LVS+A SPALNPDA+LQ GKVYF+LP STLHPDVSP+DL+SIAR+LTAAAKSA +    
Sbjct: 61  QLVSLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRP--- 120

Query: 121 RPCVVAGGGE-LKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH 172
            PCV  GGG+  KAP   + A+SRQW+P LDTI+EK +   ++SD +DKHN+
Sbjct: 121 -PCVAVGGGDGWKAP---TTAKSRQWKPFLDTIQEKAVN-KSESDLQDKHNN 160

[Close]

BLAST of Sed0023812 vs. NCBI nr
Match: XP_022996489.1 (uncharacterized protein LOC111491721 [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-45
Identity = 108/172 (62.79%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MG C+SRR     S+AV+AAD +Q+VH NGHVQ F +PITA QV    PPP+EYF+ TAA
Sbjct: 1   MGVCISRRS----SSAVAAADTIQLVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            LVS+A SPALNPDA+LQ GKVYF+LP STLHPDVSP+DL+SIAR+LTAAAKSA +    
Sbjct: 61  QLVSLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR---P 120

Query: 121 RPCVVAGGG-ELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH 172
            PCV  GGG + KAP    AA+SRQW+P LDTI+EK +   ++SD +DKHN+
Sbjct: 121 PPCVAVGGGNDWKAPV---AAKSRQWKPFLDTIQEKAVN-KSESDLQDKHNN 161

[Close]

BLAST of Sed0023812 vs. NCBI nr
Match: KAG6598890.1 (Glycosyltransferase BC10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.0 bits (476), Expect = 7.4e-44
Identity = 106/171 (61.99%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 2   GGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAM 61
           G   SRR     S+AV+AAD +Q+VH NGHVQ F +PITA QV    PPP+EYF+ TAA 
Sbjct: 421 GWLFSRRS----SSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQ 480

Query: 62  LVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQTR 121
           LVS+A SPALNPDA+LQ GKVYF+LP STLHPDVSP+DL+SIAR+LTAAAKSA +     
Sbjct: 481 LVSLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRP---- 540

Query: 122 PCVVAGGGE-LKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH 172
           PCV  GGG+  KAP   + A+SRQW+P LDTI+EK +   +QSD +DKHN+
Sbjct: 541 PCVAVGGGDGWKAP---TTAKSRQWKPFLDTIQEKAVN-KSQSDLQDKHNN 579

[Close]

BLAST of Sed0023812 vs. ExPASy TrEMBL
Match: A0A0A0LHC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.1e-48
Identity = 109/156 (69.87%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MGGC+S R   + S A +AAD+VQVVH NGHVQ F +PITA QVA + PPP+EYF+CTAA
Sbjct: 1   MGGCISHR---SSSTAAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            LVS A SPALNPD VLQ GKVYF+LPLSTLHPDVS ADLASIARRLTAAAKSAAK+G  
Sbjct: 61  QLVSTAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSL 120

Query: 121 RPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKP 157
            PC  A GGE       +A +SRQWRP+LDTI+EKP
Sbjct: 121 PPCEAADGGE--DWRCTTAGKSRQWRPLLDTIREKP 151

[Close]

BLAST of Sed0023812 vs. ExPASy TrEMBL
Match: A0A5D3CAJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00050 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.1e-48
Identity = 111/157 (70.70%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MGGC+S R     S++ +AAD+VQVVH NGHVQ F +PITA QVA K PPP+EYF+CTAA
Sbjct: 1   MGGCVSLR-----SSSDAAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            LVS A SPAL+PDAVLQ GKVYF+LP STLHPDVS ADLASIARRLTAAAKSAAK+G  
Sbjct: 61  QLVSTAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSL 120

Query: 121 RPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP 157
            PC  A GG E K  A+G   +SRQWRP+LDTIKEKP
Sbjct: 121 PPCETAEGGEEWKCTAAG---KSRQWRPLLDTIKEKP 149

[Close]

BLAST of Sed0023812 vs. ExPASy TrEMBL
Match: A0A1S3CC70 (uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.1e-48
Identity = 111/157 (70.70%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MGGC+S R     S++ +AAD+VQVVH NGHVQ F +PITA QVA K PPP+EYF+CTAA
Sbjct: 1   MGGCVSLR-----SSSDAAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            LVS A SPAL+PDAVLQ GKVYF+LP STLHPDVS ADLASIARRLTAAAKSAAK+G  
Sbjct: 61  QLVSTAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSL 120

Query: 121 RPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP 157
            PC  A GG E K  A+G   +SRQWRP+LDTIKEKP
Sbjct: 121 PPCETAEGGEEWKCTAAG---KSRQWRPLLDTIKEKP 149

[Close]

BLAST of Sed0023812 vs. ExPASy TrEMBL
Match: A0A6J1K8V3 (uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 8.5e-46
Identity = 108/172 (62.79%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MG C+SRR     S+AV+AAD +Q+VH NGHVQ F +PITA QV    PPP+EYF+ TAA
Sbjct: 1   MGVCISRRS----SSAVAAADTIQLVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            LVS+A SPALNPDA+LQ GKVYF+LP STLHPDVSP+DL+SIAR+LTAAAKSA +    
Sbjct: 61  QLVSLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR---P 120

Query: 121 RPCVVAGGG-ELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH 172
            PCV  GGG + KAP    AA+SRQW+P LDTI+EK +   ++SD +DKHN+
Sbjct: 121 PPCVAVGGGNDWKAPV---AAKSRQWKPFLDTIQEKAVN-KSESDLQDKHNN 161

[Close]

BLAST of Sed0023812 vs. ExPASy TrEMBL
Match: A0A6A2Y6W9 (OSBP(Oxysterol binding protein)-related protein 4B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111542pilonHSYRG00100 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 72/166 (43.37%), Postives = 98/166 (59.04%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MG CLS    S+ S   ++ + V+V+H NGHV+ F  PIT  +V    P   + +LCTAA
Sbjct: 1   MGCCLS---SSSCSCKYASPNTVRVIHFNGHVEDFEHPITVSEVIGNLP---KQYLCTAA 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTGQT 120
            L+S AG+  LNPDA LQ G +YF+LP STL  DVSP D+AS+ +RLTA AKS   + +T
Sbjct: 61  QLLS-AGTKPLNPDAPLQPGHLYFVLPFSTLQDDVSPLDMASVVKRLTARAKSHDGSRRT 120

Query: 121 RPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFE 167
            P     GG  +         +R W+P+LDTI+E      + SD +
Sbjct: 121 GPLSAVNGGLTR------RGTTRSWKPILDTIREMSFTGRSDSDIQ 153

[Close]

BLAST of Sed0023812 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 5.3e-08
Identity = 49/185 (26.49%), Postives = 87/185 (47.03%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKR-------PPPSE 60
           MG C+S  +   VS++ +A    ++V  NG ++ +  P+ A QV E            S 
Sbjct: 1   MGLCVSVNRNEYVSSSTTA----KIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSS 60

Query: 61  YFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKS 120
           YFLC +  L      PA+  D +LQA ++YF+LP+S     +S +D+A++A + + A + 
Sbjct: 61  YFLCNSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEK 120

Query: 121 AA-------KTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFE 172
           AA       ++G+  P V          A   A  +R      + + +K  + N  + F+
Sbjct: 121 AAGKKNRRRRSGRISPVVTLNQANDNRIA---AVNNRIGGEATNMMMQKGKLPNRTTPFK 178

[Close]

BLAST of Sed0023812 vs. TAIR 10
Match: AT1G21010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 9.1e-08
Identity = 42/164 (25.61%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPP---------- 60
           MG C+S R+  +     +++  V++V  NG ++ ++ P+ A QV E              
Sbjct: 1   MGICVSFRREDS-----NSSPTVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSR 60

Query: 61  PSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAA 120
           PS YF+C +  L      PA+  +  LQA ++YF+LP+S     ++ +D+A++A + + A
Sbjct: 61  PSSYFICDSDSLYYDDFIPAIKSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVA 120

Query: 121 AKSAAKTGQTR-------PCVVAGGGELKAPASGSAARSRQWRP 148
            +++ K    R       P ++  G       +GS    ++ RP
Sbjct: 121 IQNSVKKESRRRKKVRISPVMMLTGSNDSVNGNGSETTVKKGRP 159

[Close]

BLAST of Sed0023812 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 25/75 (33.33%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 19 AADKVQVVHQNGHVQLFSTPITAHQVAEKRP------PPSEYFLCTAAMLVSVAGSPALN 78
          A D +++VH NGHV+  S  ITA ++ +  P      P S         ++S      + 
Sbjct: 17 ALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSDHDERDVISATKIVIVP 76

Query: 79 PDAVLQAGKVYFMLP 88
          P+A LQ GK+YF++P
Sbjct: 77 PEAELQRGKIYFLMP 91

[Close]

BLAST of Sed0023812 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.7e-04
Identity = 20/69 (28.99%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 19 AADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQ 78
          A D +++VH NGHV   ++P+TA ++ +  P       C+  ++  +     L+P++ L+
Sbjct: 17 ALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCSQGVVRKIL---ILSPESELK 76

Query: 79 AGKVYFMLP 88
           G +YF++P
Sbjct: 77 RGSIYFLIP 82

[Close]

BLAST of Sed0023812 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 4.7e-04
Identity = 29/118 (24.58%), Postives = 60/118 (50.85%), Query Frame = 0


Query: 1   MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAA 60
           MG C SR            +D  +++  +G +Q FS+P+   Q+ +K P     F+C + 
Sbjct: 1   MGACASRES--------LRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTS---FVCNSD 60

Query: 61  MLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAAAKSAAKTG 119
            +       A+  +  L++G++YF+LPL+ L+  +   ++A++A + ++A   +   G
Sbjct: 61  EMDFDDAVSAVAGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVG 107

The following BLAST results are available for this feature:

BLAST of Sed0023812 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650123.1	6.4e-48	69.87	uncharacterized protein LOC105434722 [Cucumis sativus]	[more]
XP_008460258.1	8.4e-48	70.70	PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF...	[more]
KAG7029841.1	2.1e-46	62.79	hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022996489.1	1.8e-45	62.79	uncharacterized protein LOC111491721 [Cucurbita maxima]	[more]
KAG6598890.1	7.4e-44	61.99	Glycosyltransferase BC10, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0023812 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHC0	3.1e-48	69.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1	[more]
A0A5D3CAJ8	4.1e-48	70.70	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CC70	4.1e-48	70.70	uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=...	[more]
A0A6J1K8V3	8.5e-46	62.79	uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721...	[more]
A0A6A2Y6W9	1.3e-22	43.37	OSBP(Oxysterol binding protein)-related protein 4B OS=Hibiscus syriacus OX=10633...	[more]

BLAST of Sed0023812 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76600.1	5.3e-08	26.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G21010.1	9.1e-08	25.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G29195.1	1.2e-04	33.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30230.1	2.7e-04	28.99	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G66580.1	4.7e-04	24.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..154 e-value: 2.5E-24 score: 86.7
None	No IPR available	PANTHER	PTHR33052:SF2	OS06G0700300 PROTEIN	coord: 1..165
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023812.1	Sed0023812.1	mRNA