Sed0023784 (gene) Chayote v1

Overview


Name	Sed0023784
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ABI4
Location	LG11: 35286770 .. 35287432 (+)
RNA-Seq Expression	Sed0023784
Synteny	Sed0023784

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACCACTCCCCTTCTTCCTCTCTCCCTCACCCTCACCAAGACCCAAACACCAACCCTAACCCTTCTGAAAACCCTGACCCTAACTCCCCAAACACAACCCCTTCCTCTTCCCGCAAAAGAAAAGGCAAAGGCGGCCCCGACAACAACAAGTTCCGTTACCGCGGTGTCCGGCAGCGCAGCTGGGGCAAATGGGTGGCCGAGATCCGCGAGCCACGCAAGCGCACCCGCAAGTGGCTCGGCACCTTCTCCACCGCTGAGGAAGCCGCCCTCGCCTACGACCGAGCCGCCCTCCTCCTGTACGGCTCCCGCGCCAACCTCAACCTCCAAACAGCCCCCCTCAATTCTTCCCAAACACCCTCCTCCGCCACTCTCCGCCCTCTCCTCCCCCGCCCCCCGGCCGCCACTGGATACACCCTTCTTCCTCCCAATCTGCTGCATCCTCCTTCCACTGAAATGACCATTCTGCCCTCCCCCTCCTACCATCCTAACCCTAATCCCCCTCTTCCACTTCCTCCTCCCCCGCCGCCCGACGCTTCCCATCTTGGGCCTATTGGGCCTGGACCTTCCTCCTCCCTTCCCTGGCCCACCTTCGACCATCACGATGACCTTCTCCCTTCCCTTTGGGATTACGGAGATCCTTTCTTTTTCGACTTCTGA

mRNA sequence

ATGGATGACCACTCCCCTTCTTCCTCTCTCCCTCACCCTCACCAAGACCCAAACACCAACCCTAACCCTTCTGAAAACCCTGACCCTAACTCCCCAAACACAACCCCTTCCTCTTCCCGCAAAAGAAAAGGCAAAGGCGGCCCCGACAACAACAAGTTCCGTTACCGCGGTGTCCGGCAGCGCAGCTGGGGCAAATGGGTGGCCGAGATCCGCGAGCCACGCAAGCGCACCCGCAAGTGGCTCGGCACCTTCTCCACCGCTGAGGAAGCCGCCCTCGCCTACGACCGAGCCGCCCTCCTCCTGTACGGCTCCCGCGCCAACCTCAACCTCCAAACAGCCCCCCTCAATTCTTCCCAAACACCCTCCTCCGCCACTCTCCGCCCTCTCCTCCCCCGCCCCCCGGCCGCCACTGGATACACCCTTCTTCCTCCCAATCTGCTGCATCCTCCTTCCACTGAAATGACCATTCTGCCCTCCCCCTCCTACCATCCTAACCCTAATCCCCCTCTTCCACTTCCTCCTCCCCCGCCGCCCGACGCTTCCCATCTTGGGCCTATTGGGCCTGGACCTTCCTCCTCCCTTCCCTGGCCCACCTTCGACCATCACGATGACCTTCTCCCTTCCCTTTGGGATTACGGAGATCCTTTCTTTTTCGACTTCTGA

Coding sequence (CDS)

ATGGATGACCACTCCCCTTCTTCCTCTCTCCCTCACCCTCACCAAGACCCAAACACCAACCCTAACCCTTCTGAAAACCCTGACCCTAACTCCCCAAACACAACCCCTTCCTCTTCCCGCAAAAGAAAAGGCAAAGGCGGCCCCGACAACAACAAGTTCCGTTACCGCGGTGTCCGGCAGCGCAGCTGGGGCAAATGGGTGGCCGAGATCCGCGAGCCACGCAAGCGCACCCGCAAGTGGCTCGGCACCTTCTCCACCGCTGAGGAAGCCGCCCTCGCCTACGACCGAGCCGCCCTCCTCCTGTACGGCTCCCGCGCCAACCTCAACCTCCAAACAGCCCCCCTCAATTCTTCCCAAACACCCTCCTCCGCCACTCTCCGCCCTCTCCTCCCCCGCCCCCCGGCCGCCACTGGATACACCCTTCTTCCTCCCAATCTGCTGCATCCTCCTTCCACTGAAATGACCATTCTGCCCTCCCCCTCCTACCATCCTAACCCTAATCCCCCTCTTCCACTTCCTCCTCCCCCGCCGCCCGACGCTTCCCATCTTGGGCCTATTGGGCCTGGACCTTCCTCCTCCCTTCCCTGGCCCACCTTCGACCATCACGATGACCTTCTCCCTTCCCTTTGGGATTACGGAGATCCTTTCTTTTTCGACTTCTGA

Protein sequence

MDDHSPSSSLPHPHQDPNTNPNPSENPDPNSPNTTPSSSRKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLYGSRANLNLQTAPLNSSQTPSSATLRPLLPRPPAATGYTLLPPNLLHPPSTEMTILPSPSYHPNPNPPLPLPPPPPPDASHLGPIGPGPSSSLPWPTFDHHDDLLPSLWDYGDPFFFDF

Homology

[Close]

BLAST of Sed0023784 vs. NCBI nr
Match: XP_022959999.1 (ethylene-responsive transcription factor ABI4 [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 4.0e-52
Identity = 161/321 (50.16%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 1   MDDHSPSSSLPHPHQDPNTNPNPSENPDPNSP-----------NTTPSS------SRKRK 60
           MDDHSPSSS PHP +D  ++ + S +PDPNSP           NTTPSS      +RKRK
Sbjct: 1   MDDHSPSSSFPHPPRDHPSSSSSSPSPDPNSPLLPPPNPPPPSNTTPSSPTPTNGARKRK 60

Query: 61  GKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLYG 120
           GKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+AA AYDRAA++LYG
Sbjct: 61  GKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYG 120

Query: 121 SRANLNLQTAPLNSSQTPSSA------------TLRPLLPRPPAAT-------------- 180
           SRA LNLQ A  NSS +  S+            TLRPLLPRP AA               
Sbjct: 121 SRAQLNLQAASPNSSSSSHSSSSQSNSRSNNLQTLRPLLPRPAAAAFSFSSMASSLPIMT 180

Query: 181 -----------------------GYTLLPPNLLH--PPS--------------------- 220
                                  G+TL+ PNL+H  PP                      
Sbjct: 181 SHQSSSSNSNSSNFLPYGVYPSPGFTLMCPNLVHQYPPQLTQHPHAFSAPSNEIPSTSTV 240

[Close]

BLAST of Sed0023784 vs. NCBI nr
Match: KAG7033291.1 (Ethylene-responsive transcription factor ABI4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-51
Identity = 161/329 (48.94%), Postives = 181/329 (55.02%), Query Frame = 0


Query: 1   MDDHSPSSSLPHPHQDPNTNPNPSENPDPNSP---------------NTTPSS------S 60
           MDDHSPSSS PHP +D  ++ + S +PDPNSP               NTTPSS      +
Sbjct: 1   MDDHSPSSSFPHPPRDHPSSSSSSPSPDPNSPLLPPPNPPPPPPPPSNTTPSSPTPTNGA 60

Query: 61  RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAAL 120
           RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+AA AYDRAA+
Sbjct: 61  RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAI 120

Query: 121 LLYGSRANLNLQTAPLNSSQTPSSA------------TLRPLLPRPPAAT---------- 180
           +LYGSRA LNLQ +  NSS +  S+            TLRPLLPRP AAT          
Sbjct: 121 ILYGSRAQLNLQASSPNSSSSSHSSSSQSNSRSNNLQTLRPLLPRPAAATAAAAFSFSSM 180

Query: 181 -------------------------------GYTLLPPNLLH--PPS------------- 220
                                          G+TL+ PNL+H  PP              
Sbjct: 181 ASSLPIMTSHQSSSSNSNSSNFLPYGVYPSPGFTLMCPNLVHQYPPQLTQHPHAFSSPSN 240

[Close]

BLAST of Sed0023784 vs. NCBI nr
Match: KAG6602610.1 (Ethylene-responsive transcription factor ABI4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-51
Identity = 161/330 (48.79%), Postives = 181/330 (54.85%), Query Frame = 0


Query: 1   MDDHSPSSSLPHPHQDPNTNPNPSENPDPNSP----------------NTTPSS------ 60
           MDDHSPSSS PHP +D  ++ + S +PDPNSP                NTTPSS      
Sbjct: 1   MDDHSPSSSFPHPPRDHPSSSSSSPSPDPNSPLLPPPNPPPPPPPPPSNTTPSSPTPTNG 60

Query: 61  SRKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAA 120
           +RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+AA AYDRAA
Sbjct: 61  ARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAA 120

Query: 121 LLLYGSRANLNLQTAPLNSSQTPSSA------------TLRPLLPRPPAAT--------- 180
           ++LYGSRA LNLQ +  NSS +  S+            TLRPLLPRP AAT         
Sbjct: 121 IILYGSRAQLNLQASSPNSSSSSHSSSSQSNSRSNNLQTLRPLLPRPAAATAAAAFSFSS 180

Query: 181 --------------------------------GYTLLPPNLLH--PPS------------ 220
                                           G+TL+ PNL+H  PP             
Sbjct: 181 MASSLPIMTSHQSSSSNSNSSNFLPYGVYPSPGFTLMCPNLVHQYPPQLTQHPHAFSSPS 240

[Close]

BLAST of Sed0023784 vs. NCBI nr
Match: XP_022990590.1 (ethylene-responsive transcription factor ABI4 [Cucurbita maxima])

HSP 1 Score: 211.5 bits (537), Expect = 7.6e-51
Identity = 160/326 (49.08%), Postives = 183/326 (56.13%), Query Frame = 0


Query: 1   MDDHSPSSSLPHPHQD--PNTNPNPSENPDPNSP-----------------NTTPSS--- 60
           MDDHSPSSS PHP +D   +++ +PS +PDPNSP                 NTTPSS   
Sbjct: 1   MDDHSPSSSFPHPPRDHPSSSSSSPSPSPDPNSPLLPPPNPPPPPPPSTSANTTPSSPTP 60

Query: 61  ---SRKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYD 120
              +RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+AA AYD
Sbjct: 61  TNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYD 120

Query: 121 RAALLLYGSRANLNLQTAPLNSSQTPSS---------ATLRPLLPRPPAAT--------- 180
           RAA++LYGSRA LNLQ +  +S  + SS          TLRPLLPRP AA          
Sbjct: 121 RAAIILYGSRAQLNLQASSSSSHSSSSSQSSSRSNNLQTLRPLLPRPAAAAAFSFSSMAS 180

Query: 181 ----------------------------GYTLLPPNLLH--PP----------------- 220
                                       G+TL+ PNL+H  PP                 
Sbjct: 181 SLPIMTSHHSSSSSNSSNFLPYGVYPSPGFTLMCPNLVHQYPPQLTQHPHAFSAPSNEIP 240

[Close]

BLAST of Sed0023784 vs. NCBI nr
Match: XP_023545386.1 (ethylene-responsive transcription factor ABI4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-50
Identity = 162/336 (48.21%), Postives = 182/336 (54.17%), Query Frame = 0


Query: 1   MDDHSPSSSLPHPHQD--PNTNPNPSENPDPNSP---------------------NTTPS 60
           MDDHSPSSS PHP +D   +++ +PS +PDPNSP                     NTTPS
Sbjct: 1   MDDHSPSSSFPHPPRDHPSSSSSSPSPSPDPNSPLLPPPNPTHPPPPPLPPSPSANTTPS 60

Query: 61  SS-------RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEA 120
           SS       RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+A
Sbjct: 61  SSPTPTNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDA 120

Query: 121 ALAYDRAALLLYGSRANLNLQTAPLNSSQTPSSA------------TLRPLLPRPPAAT- 180
           A AYDRAA++LYGSRA LNLQ +  NSS +  S+            TLRPLLPRP AA  
Sbjct: 121 ARAYDRAAIILYGSRAQLNLQASSPNSSSSSHSSSSQSNSRSNNLQTLRPLLPRPAAAAA 180

Query: 181 --------------------------------------GYTLLPPNLLH--PPS------ 220
                                                 G+TL+ PNL+H  PP       
Sbjct: 181 AFSFSSMASSLPIMTSHQSSSNNSNSSNFLPYGVYPSPGFTLMCPNLVHQYPPQLTQHPH 240

[Close]

BLAST of Sed0023784 vs. ExPASy Swiss-Prot
Match: A0MES8 (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana OX=3702 GN=ABI4 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 5.6e-33
Identity = 88/148 (59.46%), Postives = 101/148 (68.24%), Query Frame = 0


Query: 7   SSSLPHPHQDPNTNPNPSENP--DPNSPNTTPSSSRKRKGKGGPDNNKFRYRGVRQRSWG 66
           +S   H H + N       NP  D  + ++T S+ RKRKGKGGPDN+KFRYRGVRQRSWG
Sbjct: 5   ASQHQHNHLEDNNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWG 64

Query: 67  KWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLYGSRANLNL-------------- 126
           KWVAEIREPRKRTRKWLGTF+TAE+AA AYDRAA+ LYGSRA LNL              
Sbjct: 65  KWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSS 124

Query: 127 -QTAPLNSSQTPSSATLRPLLPRPPAAT 138
              A   S+ + S+ TLRPLLPRP AAT
Sbjct: 125 VSAASSPSTSSSSTQTLRPLLPRPAAAT 152

[Close]

BLAST of Sed0023784 vs. ExPASy Swiss-Prot
Match: C7J2Z1 (Ethylene-responsive transcription factor ABI4 OS=Oryza sativa subsp. japonica OX=39947 GN=ABI4 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.6e-30
Identity = 86/158 (54.43%), Postives = 94/158 (59.49%), Query Frame = 0


Query: 38  SSRKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRA 97
           + +K  GKGGP+N KFRYRGVRQRSWGKWVAEIREPRKR+RKWLGTF+TAE+AA AYDRA
Sbjct: 33  TKKKAAGKGGPENGKFRYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRA 92

Query: 98  ALLLYGSRANLNLQTAPLNSSQTPSSAT-----------------LRPLLPRPPAATGYT 157
           ALLLYG RA+LNL   P      PSSA                  LRPLLPRPP      
Sbjct: 93  ALLLYGPRAHLNLTAPPPLPPPPPSSAAAAAASSSSAASSTSAPPLRPLLPRPPH----- 152

Query: 158 LLPPNLLHPPSTEMTILPSPSYHPNPNPPLPLPPPPPP 179
            L P   H P     + P P            PPPPPP
Sbjct: 153 -LHPAFHHQPFHHHLLQPQP------------PPPPPP 172

[Close]

BLAST of Sed0023784 vs. ExPASy Swiss-Prot
Match: Q9SVX5 (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana OX=3702 GN=DREB2F PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = 0


Query: 43  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLY 102
           +GKGGP N   +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAEEAA+AYD AAL LY
Sbjct: 16  RGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLY 75

Query: 103 GSRANLNLQTAPLNSSQTPSSA 125
           G  A LNL     N+  + S++
Sbjct: 76  GHDAYLNLPHLQRNTRPSLSNS 97

[Close]

BLAST of Sed0023784 vs. ExPASy Swiss-Prot
Match: Q9LQZ2 (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=3702 GN=DREB2D PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20
Identity = 61/103 (59.22%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 34  TTPSSSRK--RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAA 93
           T  +SSRK   +GKGGPDN    Y+GVRQR+WGKWVAEIREP +  R WLGTF T+ EAA
Sbjct: 19  TVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAA 78

Query: 94  LAYDRAALLLYGSRANLNL--------QTAPLNSSQ-TPSSAT 126
           LAYD AA  LYG  A+LNL        +TA   +SQ TPSS T
Sbjct: 79  LAYDSAARKLYGPEAHLNLPESLRSYPKTASSPASQTTPSSNT 121

[Close]

BLAST of Sed0023784 vs. ExPASy Swiss-Prot
Match: Q8LFR2 (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana OX=3702 GN=DREB2C PE=2 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19
Identity = 56/93 (60.22%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 36  PSSSRK--RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALA 95
           P  SRK   KGKGGP+N    YRGVRQR WGKWVAEIREP    R WLGTFS++ EAALA
Sbjct: 51  PKGSRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALA 110

Query: 96  YDRAALLLYGSRANLNLQTAPLNSSQTPSSATL 127
           YD AA  +YG  A LNL      SS T ++AT+
Sbjct: 111 YDEAAKAIYGQSARLNLPEITNRSSSTAATATV 143

[Close]

BLAST of Sed0023784 vs. ExPASy TrEMBL
Match: A0A6J1H9N9 (ethylene-responsive transcription factor ABI4 OS=Cucurbita moschata OX=3662 GN=LOC111460883 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52
Identity = 161/321 (50.16%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 1   MDDHSPSSSLPHPHQDPNTNPNPSENPDPNSP-----------NTTPSS------SRKRK 60
           MDDHSPSSS PHP +D  ++ + S +PDPNSP           NTTPSS      +RKRK
Sbjct: 1   MDDHSPSSSFPHPPRDHPSSSSSSPSPDPNSPLLPPPNPPPPSNTTPSSPTPTNGARKRK 60

Query: 61  GKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLYG 120
           GKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+AA AYDRAA++LYG
Sbjct: 61  GKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYG 120

Query: 121 SRANLNLQTAPLNSSQTPSSA------------TLRPLLPRPPAAT-------------- 180
           SRA LNLQ A  NSS +  S+            TLRPLLPRP AA               
Sbjct: 121 SRAQLNLQAASPNSSSSSHSSSSQSNSRSNNLQTLRPLLPRPAAAAFSFSSMASSLPIMT 180

Query: 181 -----------------------GYTLLPPNLLH--PPS--------------------- 220
                                  G+TL+ PNL+H  PP                      
Sbjct: 181 SHQSSSSNSNSSNFLPYGVYPSPGFTLMCPNLVHQYPPQLTQHPHAFSAPSNEIPSTSTV 240

[Close]

BLAST of Sed0023784 vs. ExPASy TrEMBL
Match: A0A6J1JQI1 (ethylene-responsive transcription factor ABI4 OS=Cucurbita maxima OX=3661 GN=LOC111487424 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 3.7e-51
Identity = 160/326 (49.08%), Postives = 183/326 (56.13%), Query Frame = 0


Query: 1   MDDHSPSSSLPHPHQD--PNTNPNPSENPDPNSP-----------------NTTPSS--- 60
           MDDHSPSSS PHP +D   +++ +PS +PDPNSP                 NTTPSS   
Sbjct: 1   MDDHSPSSSFPHPPRDHPSSSSSSPSPSPDPNSPLLPPPNPPPPPPPSTSANTTPSSPTP 60

Query: 61  ---SRKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYD 120
              +RKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+AA AYD
Sbjct: 61  TNGARKRKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYD 120

Query: 121 RAALLLYGSRANLNLQTAPLNSSQTPSS---------ATLRPLLPRPPAAT--------- 180
           RAA++LYGSRA LNLQ +  +S  + SS          TLRPLLPRP AA          
Sbjct: 121 RAAIILYGSRAQLNLQASSSSSHSSSSSQSSSRSNNLQTLRPLLPRPAAAAAFSFSSMAS 180

Query: 181 ----------------------------GYTLLPPNLLH--PP----------------- 220
                                       G+TL+ PNL+H  PP                 
Sbjct: 181 SLPIMTSHHSSSSSNSSNFLPYGVYPSPGFTLMCPNLVHQYPPQLTQHPHAFSAPSNEIP 240

[Close]

BLAST of Sed0023784 vs. ExPASy TrEMBL
Match: A0A1S3B3F1 (ethylene-responsive transcription factor ABI4 OS=Cucumis melo OX=3656 GN=LOC103485721 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 8.7e-45
Identity = 150/306 (49.02%), Postives = 170/306 (55.56%), Query Frame = 0


Query: 3   DHSPSSS----LPHP----HQDPNTNPNPSENPDPNSP--------NTTPSSSRKRKGKG 62
           DHSPSSS    LP P    H  P++    S NP  +SP        N   + +RKRKGKG
Sbjct: 4   DHSPSSSSSHLLPQPKPLDHSSPSSPSPSSSNPSDSSPNNNNNINNNNNNNGARKRKGKG 63

Query: 63  GPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLYGSRA 122
           GPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+AA AYDRAA++LYGSRA
Sbjct: 64  GPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRA 123

Query: 123 NLNLQ-TAPLN------------SSQTPSSATLRPLLPRP------------------PA 182
            LNLQ T+P N            SS++ SS +LRPLLPRP                  P+
Sbjct: 124 QLNLQSTSPNNNYSSSNSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPS 183

Query: 183 ATGYT--------LLPPNLLH---------------------------PP--STEMTILP 221
              YT        L+ PNLLH                           PP  +T     P
Sbjct: 184 PQSYTAIYPPSSSLIYPNLLHNQYPPQLTQHPTHEIITSSTTTVTNCTPPISTTATPSSP 243

[Close]

BLAST of Sed0023784 vs. ExPASy TrEMBL
Match: A0A0A0KBN1 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011730 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 151/303 (49.83%), Postives = 175/303 (57.76%), Query Frame = 0


Query: 3   DHSPSSS----LPHP----HQDPN-TNPNP-SENPDPNSPNTTPSS--SRKRKGKGGPDN 62
           DHSPSSS    LP P    H  P+ ++P+P S NP  +SPN   ++  +RKRKGKGGPDN
Sbjct: 4   DHSPSSSSSHLLPQPKPLDHSSPSPSSPSPSSSNPSDSSPNNNNNNNGARKRKGKGGPDN 63

Query: 63  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLYGSRANLNL 122
           NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAE+AA AYDRAA++LYGSRA LNL
Sbjct: 64  NKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL 123

Query: 123 Q-TAPLN-------------SSQTPSSATLRPLLPRP------------------PAATG 182
           Q T+P N             SS++ SS +LRPLLPRP                  P+   
Sbjct: 124 QSTSPNNNYSSSNSSSSSSSSSRSSSSTSLRPLLPRPALSSTFSFSSMASSLPLMPSPQS 183

Query: 183 YT--------LLPPNLLH---------------------------PPSTEMTILPSP--S 221
           +T        L+ PNLLH                           PP + +    SP  S
Sbjct: 184 FTAIYPPPPSLIYPNLLHNQYPAQVTQHPTHEIITSSTTTVTNSTPPISTIATPSSPTTS 243

[Close]

BLAST of Sed0023784 vs. ExPASy TrEMBL
Match: A0A6P3ZG14 (ethylene-responsive transcription factor ABI4-like OS=Ziziphus jujuba OX=326968 GN=LOC107413884 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 123/266 (46.24%), Postives = 147/266 (55.26%), Query Frame = 0


Query: 3   DHSPSSSLPHPHQDPNTNPNPSENPDPNSPN-------TTPSSS----RKRKGKGGPDNN 62
           D     SLP     P  + N ++N D +S N       TT S+S    RK KGKGGPDNN
Sbjct: 2   DQDQQHSLPSDPSLPPQHTNNNQNDDLSSSNAAEPTTITTASASNTTTRKSKGKGGPDNN 61

Query: 63  KFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLYGSRANLNLQ 122
           KFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTF+TAE+AA AYDRAA++LYGSRA LNLQ
Sbjct: 62  KFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQ 121

Query: 123 TAPLNSSQTPSSA---------------TLRPLLPRPPAATGYTLLPPNLLHP------- 182
            +  +SS + SS+               TLRPLLPR P+  G T  P +   P       
Sbjct: 122 PSVSSSSSSSSSSTRGGSSSSSSSSSTQTLRPLLPR-PSGFGLTAYPSSAAQPIPLMGVA 181

Query: 183 ---------------PSTEMTILPSPSYHPNPNPPLPLPPPPPPDASHLGPIGPGPSSSL 221
                          P+T  ++L   S   NP   L +P P       +G +  G  S +
Sbjct: 182 AASSGFVPYGGVGGYPTTSASLLCPNSLLQNPQQQLMVPDP-------IGSVN-GAVSPM 241

[Close]

BLAST of Sed0023784 vs. TAIR 10
Match: AT2G40220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-34
Identity = 88/148 (59.46%), Postives = 101/148 (68.24%), Query Frame = 0


Query: 7   SSSLPHPHQDPNTNPNPSENP--DPNSPNTTPSSSRKRKGKGGPDNNKFRYRGVRQRSWG 66
           +S   H H + N       NP  D  + ++T S+ RKRKGKGGPDN+KFRYRGVRQRSWG
Sbjct: 5   ASQHQHNHLEDNNQTLTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWG 64

Query: 67  KWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLYGSRANLNL-------------- 126
           KWVAEIREPRKRTRKWLGTF+TAE+AA AYDRAA+ LYGSRA LNL              
Sbjct: 65  KWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSS 124

Query: 127 -QTAPLNSSQTPSSATLRPLLPRPPAAT 138
              A   S+ + S+ TLRPLLPRP AAT
Sbjct: 125 VSAASSPSTSSSSTQTLRPLLPRPAAAT 152

[Close]

BLAST of Sed0023784 vs. TAIR 10
Match: AT3G57600.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 7.9e-22
Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = 0


Query: 43  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLY 102
           +GKGGP N   +YRGVRQR+WGKWVAEIREP+KR R WLG+F+TAEEAA+AYD AAL LY
Sbjct: 16  RGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLY 75

Query: 103 GSRANLNLQTAPLNSSQTPSSA 125
           G  A LNL     N+  + S++
Sbjct: 76  GHDAYLNLPHLQRNTRPSLSNS 97

[Close]

BLAST of Sed0023784 vs. TAIR 10
Match: AT1G75490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.9e-21
Identity = 61/103 (59.22%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 34  TTPSSSRK--RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAA 93
           T  +SSRK   +GKGGPDN    Y+GVRQR+WGKWVAEIREP +  R WLGTF T+ EAA
Sbjct: 19  TVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAA 78

Query: 94  LAYDRAALLLYGSRANLNL--------QTAPLNSSQ-TPSSAT 126
           LAYD AA  LYG  A+LNL        +TA   +SQ TPSS T
Sbjct: 79  LAYDSAARKLYGPEAHLNLPESLRSYPKTASSPASQTTPSSNT 121

[Close]

BLAST of Sed0023784 vs. TAIR 10
Match: AT2G40340.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 8.7e-21
Identity = 56/93 (60.22%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 36  PSSSRK--RKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALA 95
           P  SRK   KGKGGP+N    YRGVRQR WGKWVAEIREP    R WLGTFS++ EAALA
Sbjct: 51  PKGSRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALA 110

Query: 96  YDRAALLLYGSRANLNLQTAPLNSSQTPSSATL 127
           YD AA  +YG  A LNL      SS T ++AT+
Sbjct: 111 YDEAAKAIYGQSARLNLPEITNRSSSTAATATV 143

[Close]

BLAST of Sed0023784 vs. TAIR 10
Match: AT3G11020.1 (DRE/CRT-binding protein 2B )

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-20
Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 43  KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAALAYDRAALLLY 102
           KGKGGPDN+   +RGVRQR WGKWVAEIREP+  TR WLGTF TAE+AA AYD AA  +Y
Sbjct: 66  KGKGGPDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMY 125

Query: 103 GSRANLN 110
           GS A LN
Sbjct: 126 GSLARLN 132

The following BLAST results are available for this feature:

BLAST of Sed0023784 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959999.1	4.0e-52	50.16	ethylene-responsive transcription factor ABI4 [Cucurbita moschata]	[more]
KAG7033291.1	1.5e-51	48.94	Ethylene-responsive transcription factor ABI4, partial [Cucurbita argyrosperma s...	[more]
KAG6602610.1	2.0e-51	48.79	Ethylene-responsive transcription factor ABI4, partial [Cucurbita argyrosperma s...	[more]
XP_022990590.1	7.6e-51	49.08	ethylene-responsive transcription factor ABI4 [Cucurbita maxima]	[more]
XP_023545386.1	1.3e-50	48.21	ethylene-responsive transcription factor ABI4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0023784 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MES8	5.6e-33	59.46	Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
C7J2Z1	7.6e-30	54.43	Ethylene-responsive transcription factor ABI4 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SVX5	1.1e-20	63.41	Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana OX=370...	[more]
Q9LQZ2	5.5e-20	59.22	Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=370...	[more]
Q8LFR2	1.2e-19	60.22	Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Sed0023784 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9N9	1.9e-52	50.16	ethylene-responsive transcription factor ABI4 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JQI1	3.7e-51	49.08	ethylene-responsive transcription factor ABI4 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A1S3B3F1	8.7e-45	49.02	ethylene-responsive transcription factor ABI4 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KBN1	1.1e-44	49.83	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011730 PE=...	[more]
A0A6P3ZG14	2.2e-35	46.24	ethylene-responsive transcription factor ABI4-like OS=Ziziphus jujuba OX=326968 ...	[more]

BLAST of Sed0023784 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40220.1	4.0e-34	59.46	Integrase-type DNA-binding superfamily protein	[more]
AT3G57600.1	7.9e-22	63.41	Integrase-type DNA-binding superfamily protein	[more]
AT1G75490.1	3.9e-21	59.22	Integrase-type DNA-binding superfamily protein	[more]
AT2G40340.1	8.7e-21	60.22	Integrase-type DNA-binding superfamily protein	[more]
AT3G11020.1	2.5e-20	71.64	DRE/CRT-binding protein 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 77..93 score: 68.98 coord: 55..66 score: 73.18
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 54..117 e-value: 1.2E-37 score: 141.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 54..103 e-value: 7.5E-14 score: 51.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 54..111 score: 22.220577
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 54..113 e-value: 3.99188E-33 score: 111.98
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 53..112 e-value: 1.6E-24 score: 87.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..56
None	No IPR available	PANTHER	PTHR31241:SF24	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4	coord: 12..157
None	No IPR available	PANTHER	PTHR31241	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 12..157
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 54..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023784.1	Sed0023784.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding