
Sed0023716 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGGATCCCGCCTATTGGTGATATAGTTAAAGTTAATGTTGATGCAGCAATTTGTAGTCAGGAGGGAAGGACCGGAATCGGGGTAATCGCACGAAATTCTTATGGGGATTGTATGTTTTCTTTTTGCAAACCTATCATTGGGGAGTTAGTGGCTGTAGCTGCAGAAGCCGTGGCTGTTCGTGATGGAATTATGATGGCGTGGGAGTTGGGGTTCAGGCGGGTTGAGTTGGAAACTGATAATCAAGCGGTTGCCCTTATGCTTCAATCACGATCTTTTGGGACAACGGAGGTGGGGGGGATTATTGATGAATCTTTGATTTTTGCAGCGAAGTTCCTCTCTATGTCCTTTTCTTGGTGTAATCGTCAAGCAAATTCATTGGCTCATTCTCTTTCGAAGATGGCTGCGATGGAAAATTTGAATATTTATGTGATGGAGGACGGTCCAGAAGCTCTTCAGAATGGACTTCTTTCAGAAAAACCTCGAGTGTTTGACTCCTGCGTGAGTTTAATTGGTCAAGTCATTGTTAATATTTTTCTTCTGCATTCTGTTTCAAAAAAAAAAAAAAGAAAAGAAAAAAAAGAAAAGTAAGAGTAGAGAGAGAATTTTTTTATTGAGAATGGTGTGTCTTTCAATACTTCATGCACTCACATTTAATGGCATAGAGAATAAATAGGAAAGAACTTAATTAGTGGATAAGTGGTTGAGTTGGAGTGAGATAAGGCTTAATGGACATTTATATTCATAATCGTCAATATATACTCTATATTGACAATTTTTAAGTATTGAAAATAAACCATTAATGACTGATTATTAATTTCATACCAGGGTGATAAGTTCAATCTATAGTGGTCACATACCTAAGAATTAATTTTTCACAGATTTCTTTGTCATTTAAATATTATAAGGTCAAATGATATGTCTCATAACAATAGTCGAGATGGACGCAAATTGGTCCAAATAACTATAAAGTAGTGTCATAAAAGGATCAAATGTGATACTTTTTTAACATTGTTATAGTTTTACTTTTCAACAGTGAGTATCAACCATGCACTTTTCATAGTGATGTTAATAATTCTTCAATAACTAAATATATATGTCATTAATGATAATGAGTCAACAATAACTAACATATAATCTCATAAGGGTCAACCATGATACTTTTTATGAAATGTAATGATTAAACTTTTCCTCTTTAGAGTCATGTAAGTGAATTATAACTCTAAATTATAGTCAATATACTTAGTATCCTCTAGTAAGTAATATATATACAATCATTTTAACATTTATCAACAAAAAAATATTAAAACTTAAGTGACTAAATTGAAATTACATTTTGAACAACACAGTGACAATATTGAAAAAGAATCCAAAAGTTGAACTATCAACCGTAAAATCAATCAAGCCCTAAAAAGAGAGGGAAAAAAAATGTGGTTGAAGATGTTTGAGAGCAACAGCCTTCAATTTGTGGGTCTGTTGGGTTGAAATGACAAAATTCAATGAGTTTCACGTGCAAACCACAACACAAAACCAGACATAACCACGCAACTCATGCCAATAAATCAAAAACTCTTAATTCATCTCATTATTATTTTGAGCAAATATATTACTAATGAAATACACATTTTTGTTATTTTTTTTTTTTTTGTAAATAAGCACGGTTTCTTTTTGAACAAAATAAATTAGGACACATCCGTAGGGAATAGATCCCACTAGAGATGTCAATTTTCCTTGTAGGGTCGGGGCCCCGTGGGGACCTGCCCTGAACCGGATGGTGAATCCCCGTTTAGGCGATGAGTGGGAGAGTGAGCGGGGATGAAAAAATTCCTGCAACCTAAACGGGGACGAAGACGGAGACGGAGAATGTATTTCCATCCCTGCTCCATTTACATTTTTATTTATTTATTTATTTTTAAAAATAAATTTCCCCCCTTTTACTAATTTAATCTTTAGTTATAATAGTTATAATATTTTATTTGTAGAAATATTTATTCAAATACATATTTTTTTTACAATAATTAGTTATCTTATTTAATTTAATGTATATTTTCCATGAAAAATTAACTATTTGAAAATATTATTAAAAAATACTAATAAAATTTAAGATTAGTAAAAGAAAAAAAAAAACGGTGAATTTTTCAAGAACTCAATCCGCGCTAATTCTCTGCGATGAATTCTTGTCTCATCTCCGAAGAAAGAACGGCGAATTTCGCGGGGATGGGGACGGGGAGGGCATTCCTCAACCCCACCCCACTGCGTGAACATCTCTAAATCCCACCACCAAAAACAAATTCGATCACGAACAATAAATACACCCTACAAGAGATGTTAA ATGGGTTGGATCCCGCCTATTGGTGATATAGTTAAAGTTAATGTTGATGCAGCAATTTGTAGTCAGGAGGGAAGGACCGGAATCGGGGTAATCGCACGAAATTCTTATGGGGATTGTATGTTTTCTTTTTGCAAACCTATCATTGGGGAGTTAGTGGCTGTAGCTGCAGAAGCCGTGGCTGTTCGTGATGGAATTATGATGGCGTGGGAGTTGGGGTTCAGGCGGGTTGAGTTGGAAACTGATAATCAAGCGGTTGCCCTTATGCTTCAATCACGATCTTTTGGGACAACGGAGGTGGGGGGGATTATTGATGAATCTTTGATTTTTGCAGCGAACAAATTCATTGGCTCATTCTCTTTCGAAGATGGCTGCGATGGAAAATTTGAATATTTATGTGATGGAGGACGGTCCAGAAGCTCTTCAGAATGGACTTCTTTCAGAAAAACCTCGAAACGGCGAATTTCGCGGGGATGGGGACGGGGAGGGCATTCCTCAACCCCACCCCACTGCGTGAACATCTCTAAATCCCACCACCAAAAACAAATTCGATCACGAACAATAAATACACCCTACAAGAGATGTTAA ATGGGTTGGATCCCGCCTATTGGTGATATAGTTAAAGTTAATGTTGATGCAGCAATTTGTAGTCAGGAGGGAAGGACCGGAATCGGGGTAATCGCACGAAATTCTTATGGGGATTGTATGTTTTCTTTTTGCAAACCTATCATTGGGGAGTTAGTGGCTGTAGCTGCAGAAGCCGTGGCTGTTCGTGATGGAATTATGATGGCGTGGGAGTTGGGGTTCAGGCGGGTTGAGTTGGAAACTGATAATCAAGCGGTTGCCCTTATGCTTCAATCACGATCTTTTGGGACAACGGAGGTGGGGGGGATTATTGATGAATCTTTGATTTTTGCAGCGAACAAATTCATTGGCTCATTCTCTTTCGAAGATGGCTGCGATGGAAAATTTGAATATTTATGTGATGGAGGACGGTCCAGAAGCTCTTCAGAATGGACTTCTTTCAGAAAAACCTCGAAACGGCGAATTTCGCGGGGATGGGGACGGGGAGGGCATTCCTCAACCCCACCCCACTGCGTGAACATCTCTAAATCCCACCACCAAAAACAAATTCGATCACGAACAATAAATACACCCTACAAGAGATGTTAA MGWIPPIGDIVKVNVDAAICSQEGRTGIGVIARNSYGDCMFSFCKPIIGELVAVAAEAVAVRDGIMMAWELGFRRVELETDNQAVALMLQSRSFGTTEVGGIIDESLIFAANKFIGSFSFEDGCDGKFEYLCDGGRSRSSSEWTSFRKTSKRRISRGWGRGGHSSTPPHCVNISKSHHQKQIRSRTINTPYKRC Homology
BLAST of Sed0023716 vs. NCBI nr
Match: XP_021766484.1 (uncharacterized protein LOC110730920 [Chenopodium quinoa]) HSP 1 Score: 79.3 bits (194), Expect = 4.0e-11 Identity = 42/125 (33.60%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of Sed0023716 vs. NCBI nr
Match: QHO42494.1 (Putative ribonuclease H protein [Arachis hypogaea]) HSP 1 Score: 73.9 bits (180), Expect = 1.7e-09 Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 0
BLAST of Sed0023716 vs. NCBI nr
Match: XP_030945916.1 (uncharacterized protein LOC115970418 [Quercus lobata]) HSP 1 Score: 73.6 bits (179), Expect = 2.2e-09 Identity = 40/118 (33.90%), Postives = 61/118 (51.69%), Query Frame = 0
BLAST of Sed0023716 vs. NCBI nr
Match: QHO14044.1 (Putative ribonuclease H protein [Arachis hypogaea]) HSP 1 Score: 73.2 bits (178), Expect = 2.8e-09 Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Sed0023716 vs. NCBI nr
Match: XP_023880097.1 (uncharacterized protein LOC111992470 [Quercus suber]) HSP 1 Score: 72.8 bits (177), Expect = 3.7e-09 Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 0
BLAST of Sed0023716 vs. ExPASy TrEMBL
Match: A0A803KV00 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.9e-11 Identity = 42/125 (33.60%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of Sed0023716 vs. ExPASy TrEMBL
Match: A0A7N2LIH6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 7.3e-11 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Sed0023716 vs. ExPASy TrEMBL
Match: A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.8e-09 Identity = 40/118 (33.90%), Postives = 58/118 (49.15%), Query Frame = 0
BLAST of Sed0023716 vs. ExPASy TrEMBL
Match: A0A7J8LRX5 (RNase H domain-containing protein OS=Gossypium lobatum OX=34289 GN=Golob_014115 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 5.2e-09 Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Sed0023716 vs. ExPASy TrEMBL
Match: A0A2N9HTD1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42846 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 8.9e-09 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
BLAST of Sed0023716 vs. TAIR 10
Match: AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 4.4e-08 Identity = 31/90 (34.44%), Postives = 45/90 (50.00%), Query Frame = 0
BLAST of Sed0023716 vs. TAIR 10
Match: AT5G61090.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 42.4 bits (98), Expect = 5.0e-04 Identity = 28/93 (30.11%), Postives = 44/93 (47.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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