Sed0023715 (gene) Chayote v1

Overview


Name	Sed0023715
Type	gene
Organism	Sechium edule (Chayote v1)
Description	leucine-rich repeat extensin-like protein 3
Location	LG06: 37684316 .. 37685012 (+)
RNA-Seq Expression	Sed0023715
Synteny	Sed0023715

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTCATTATTCTCATGCACCTAACATAAGCAAATAACAGCCCAACACTCACCTTCACATTAAATCTCTCTCTCTCTCTCTCTCCAAACTCAATCTTCATTGATTTCAGAGCTTCTTCTACCTGAACATGGCGCCTTCTGCCGCCATTTTTCTCACTCTTTCTCTTCTCTTCTCCTTCATACTCGTCGCCCGGGCCCAAACCCCTCTGCCGATATCGATCGGTTCGCAAGATCCCGACACAGAAATAAAATGTGGATCTTGCCCTTGTAACAACCCATGTGTTCAACAGTTACCACCGCCTCCACCACCACCGTCACCAGTACCACCACCACCGTATTGCAATCAAGCACTGTTTCATCCACCGCCACCTCCGAGGTTTACGTATACGACATTGCCATCTTCACCACCGCCTCCGAGGTTTATTTATACGACGGGTGTTCCCGGTAACCTGTACCAGTTTGACGAGAATCATCGATGGTATTACTTCTCCGGTGCAACGGGGAAGCAGCCGGCCATGGCGGCCCTCGTTGTGGCTCTTGGCTGTGGAGCTTTAGATCTCATGGTGTTTGGTAAGTGGTAAAGGTTGAATAGGATATAGAGCAAATTGATGTATTAAACTTGGTCTAAGATATTAAAAATATTTTACTCTCCCAAGTATAAACATATTAATATGATTTTTAGATATCAATTTATT

mRNA sequence

CTTTTTTCATTATTCTCATGCACCTAACATAAGCAAATAACAGCCCAACACTCACCTTCACATTAAATCTCTCTCTCTCTCTCTCTCCAAACTCAATCTTCATTGATTTCAGAGCTTCTTCTACCTGAACATGGCGCCTTCTGCCGCCATTTTTCTCACTCTTTCTCTTCTCTTCTCCTTCATACTCGTCGCCCGGGCCCAAACCCCTCTGCCGATATCGATCGGTTCGCAAGATCCCGACACAGAAATAAAATGTGGATCTTGCCCTTGTAACAACCCATGTGTTCAACAGTTACCACCGCCTCCACCACCACCGTCACCAGTACCACCACCACCGTATTGCAATCAAGCACTGTTTCATCCACCGCCACCTCCGAGGTTTACGTATACGACATTGCCATCTTCACCACCGCCTCCGAGGTTTATTTATACGACGGGTGTTCCCGGTAACCTGTACCAGTTTGACGAGAATCATCGATGGTATTACTTCTCCGGTGCAACGGGGAAGCAGCCGGCCATGGCGGCCCTCGTTGTGGCTCTTGGCTGTGGAGCTTTAGATCTCATGGTGTTTGGTAAGTGGTAAAGGTTGAATAGGATATAGAGCAAATTGATGTATTAAACTTGGTCTAAGATATTAAAAATATTTTACTCTCCCAAGTATAAACATATTAATATGATTTTTAGATATCAATTTATT

Coding sequence (CDS)

ATGGCGCCTTCTGCCGCCATTTTTCTCACTCTTTCTCTTCTCTTCTCCTTCATACTCGTCGCCCGGGCCCAAACCCCTCTGCCGATATCGATCGGTTCGCAAGATCCCGACACAGAAATAAAATGTGGATCTTGCCCTTGTAACAACCCATGTGTTCAACAGTTACCACCGCCTCCACCACCACCGTCACCAGTACCACCACCACCGTATTGCAATCAAGCACTGTTTCATCCACCGCCACCTCCGAGGTTTACGTATACGACATTGCCATCTTCACCACCGCCTCCGAGGTTTATTTATACGACGGGTGTTCCCGGTAACCTGTACCAGTTTGACGAGAATCATCGATGGTATTACTTCTCCGGTGCAACGGGGAAGCAGCCGGCCATGGCGGCCCTCGTTGTGGCTCTTGGCTGTGGAGCTTTAGATCTCATGGTGTTTGGTAAGTGGTAA

Protein sequence

MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPPPPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYFSGATGKQPAMAALVVALGCGALDLMVFGKW

Homology

[Close]

BLAST of Sed0023715 vs. NCBI nr
Match: KAG6581215.1 (hypothetical protein SDJN03_21217, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47
Identity = 106/150 (70.67%), Postives = 119/150 (79.33%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPP 60
           MAPSAAI L+LS LF F+ +A +Q   P+ +  QDP++EIKCGSCPC+NPCV+Q PPPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLADSQPVSPVDL--QDPNSEIKCGSCPCSNPCVKQFPPPPP 60

Query: 61  PPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYF 120
           P    PPPP C  AL  PPPPPRF YT+L S PPPPRFIYTTGVPGNLYQ D N+RWYYF
Sbjct: 61  P----PPPPNCKPALPPPPPPPRFIYTSL-SPPPPPRFIYTTGVPGNLYQIDANNRWYYF 120

Query: 121 SGATGKQPAMAALVVALGCGALDLMVFGKW 151
           SG T  QPA AALVVALGCGAL+LM FGKW
Sbjct: 121 SGTTRNQPATAALVVALGCGALNLMAFGKW 143

[Close]

BLAST of Sed0023715 vs. NCBI nr
Match: KAG7017949.1 (hypothetical protein SDJN02_19815, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.1 bits (492), Expect = 8.5e-46
Identity = 103/150 (68.67%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPP 60
           MAPSAAI L+LS LF F+ +A +Q   P+    QDP++EIKCGSCPC+NPCV+Q PPPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLADSQPVSPVD--PQDPNSEIKCGSCPCSNPCVKQFPPPPP 60

Query: 61  PPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYF 120
           PP+       C  AL  PPPPPRF YT+L S PPPPRFIYTTGVPGNLYQ D N+RWYYF
Sbjct: 61  PPN-------CKPALPPPPPPPRFIYTSL-SPPPPPRFIYTTGVPGNLYQIDANNRWYYF 120

Query: 121 SGATGKQPAMAALVVALGCGALDLMVFGKW 151
           SG T  QPA AALVVALGCGAL+LM FGKW
Sbjct: 121 SGTTRNQPATAALVVALGCGALNLMAFGKW 140

[Close]

BLAST of Sed0023715 vs. NCBI nr
Match: XP_023528316.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.1 bits (492), Expect = 8.5e-46
Identity = 104/150 (69.33%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPP 60
           MAPSAAI L+LS LF F+ +A +Q   P+    QDP++EIKCGSCPC+NPCV+Q PPPPP
Sbjct: 3   MAPSAAIPLSLSFLFLFLHLADSQPFSPVD--PQDPNSEIKCGSCPCSNPCVKQFPPPPP 62

Query: 61  PPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYF 120
           P    PPPP C  AL  PPPPPRF YT L S PPPPRFIYTTGVPGNLYQ D N+RWYYF
Sbjct: 63  P----PPPPNCKPALPPPPPPPRFIYTAL-SPPPPPRFIYTTGVPGNLYQIDANNRWYYF 122

Query: 121 SGATGKQPAMAALVVALGCGALDLMVFGKW 151
           SG T  +PA A LVVALGCGAL+LM FGKW
Sbjct: 123 SGTTRNRPATAVLVVALGCGALNLMAFGKW 145

[Close]

BLAST of Sed0023715 vs. NCBI nr
Match: XP_022984145.1 (probable pathogenesis-related protein ARB_02861 [Cucurbita maxima])

HSP 1 Score: 191.4 bits (485), Expect = 5.5e-45
Identity = 103/150 (68.67%), Postives = 115/150 (76.67%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPP 60
           MAPSAAI L+LS LF F+ +A +Q   P+    QDP++EIKCGSCPC+NPCV+Q PPPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVD--PQDPNSEIKCGSCPCSNPCVKQFPPPPP 60

Query: 61  PPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYF 120
                PPPP C  AL  PPPPPRF YT+L S PPPPRFIYTTGVPGNLYQ D N+RWYYF
Sbjct: 61  -----PPPPNCKPALPPPPPPPRFIYTSL-SPPPPPRFIYTTGVPGNLYQIDANNRWYYF 120

Query: 121 SGATGKQPAMAALVVALGCGALDLMVFGKW 151
           SG T    A AALVVALGCGAL+LM FGKW
Sbjct: 121 SGTTRNWSATAALVVALGCGALNLMAFGKW 142

[Close]

BLAST of Sed0023715 vs. NCBI nr
Match: XP_011651408.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43
Identity = 93/150 (62.00%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPP 60
           MAP AAI L+ S L   +L+A +QT  PI +  Q+PD EIKCGSCPC+NPC+QQL PPPP
Sbjct: 3   MAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 62

Query: 61  PPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYF 120
           PP P PPP  C   +   PPPPRF YTT   +PPPPRF YTTGVPGNLY+ D N+ WYYF
Sbjct: 63  PPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYF 122

Query: 121 SGATGKQPAMAALVVALGCGALDLMVFGKW 151
           SG    +P MAA+ VA+GCGAL LM F KW
Sbjct: 123 SGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]

BLAST of Sed0023715 vs. ExPASy TrEMBL
Match: A0A6J1J7W0 (probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=LOC111482528 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.7e-45
Identity = 103/150 (68.67%), Postives = 115/150 (76.67%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPP 60
           MAPSAAI L+LS LF F+ +A +Q   P+    QDP++EIKCGSCPC+NPCV+Q PPPPP
Sbjct: 1   MAPSAAIPLSLSFLFLFLHLANSQPVSPVD--PQDPNSEIKCGSCPCSNPCVKQFPPPPP 60

Query: 61  PPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYF 120
                PPPP C  AL  PPPPPRF YT+L S PPPPRFIYTTGVPGNLYQ D N+RWYYF
Sbjct: 61  -----PPPPNCKPALPPPPPPPRFIYTSL-SPPPPPRFIYTTGVPGNLYQIDANNRWYYF 120

Query: 121 SGATGKQPAMAALVVALGCGALDLMVFGKW 151
           SG T    A AALVVALGCGAL+LM FGKW
Sbjct: 121 SGTTRNWSATAALVVALGCGALNLMAFGKW 142

[Close]

BLAST of Sed0023715 vs. ExPASy TrEMBL
Match: A0A0A0L7R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.6e-44
Identity = 93/150 (62.00%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPP 60
           MAP AAI L+ S L   +L+A +QT  PI +  Q+PD EIKCGSCPC+NPC+QQL PPPP
Sbjct: 3   MAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 62

Query: 61  PPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYF 120
           PP P PPP  C   +   PPPPRF YTT   +PPPPRF YTTGVPGNLY+ D N+ WYYF
Sbjct: 63  PPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYF 122

Query: 121 SGATGKQPAMAALVVALGCGALDLMVFGKW 151
           SG    +P MAA+ VA+GCGAL LM F KW
Sbjct: 123 SGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]

BLAST of Sed0023715 vs. ExPASy TrEMBL
Match: A0A5A7V4T2 (Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00500 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43
Identity = 96/150 (64.00%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPPPP 60
           M  SAAI L+ S L   +L+A +QT  PISI  Q+PD EIKCGSCPC+NPC+QQL PPPP
Sbjct: 1   MPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 60

Query: 61  PPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYF 120
           PP   PPP  C   +   PPPPRF YT    +PPPPRF YTTGVPGNLY+ D N+ WYYF
Sbjct: 61  PP---PPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYF 120

Query: 121 SGATGKQPAMAALVVALGCGALDLMVFGKW 151
           SG TG +P MAA+VVALGCGAL LM F KW
Sbjct: 121 SGTTGTRPGMAAVVVALGCGALHLMGFSKW 147

[Close]

BLAST of Sed0023715 vs. ExPASy TrEMBL
Match: A0A6J1GAW3 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452509 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.5e-35
Identity = 100/152 (65.79%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCP-CNNPCVQQLPPPP 60
           MAPSAAIF  LSLL SFI     QT  PIS    DPDTEI C S   C+NP VQQL P P
Sbjct: 1   MAPSAAIF--LSLLLSFI-----QTSPPISASPLDPDTEINCDSTTLCSNPSVQQLQPSP 60

Query: 61  PPPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYY 120
               P+PPPP          PPPRFTYTTL S PPP RFIYTTGVP +LYQ DE +RWYY
Sbjct: 61  ----PLPPPPL---------PPPRFTYTTLSSPPPPLRFIYTTGVPSDLYQNDEKNRWYY 120

Query: 121 FSGATGKQPAMAAL-VVALGCGALDLMVFGKW 151
           FSGA GK PAMAAL VV L CGALDL+VFGKW
Sbjct: 121 FSGAVGKPPAMAALVVVGLACGALDLIVFGKW 132

[Close]

BLAST of Sed0023715 vs. ExPASy TrEMBL
Match: A0A6J1KHA8 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111493219 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.0e-20
Identity = 71/119 (59.66%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 1   MAPSAAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGS-CPCNNPCVQQLPPPP 60
           MAPSAAIF  LSLL SFI     Q   PI     DP  EI CGS  PC+NP VQQL P P
Sbjct: 1   MAPSAAIF--LSLLLSFI-----QASPPILASPLDPSAEINCGSTTPCSNPSVQQLQPSP 60

Query: 61  PPPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWY 119
               P+PPPP          PPPRFTYTTL S PPPP+FIYTTGVP +LYQ DE +RWY
Sbjct: 61  ----PLPPPPL---------PPPRFTYTTLSSPPPPPKFIYTTGVPSDLYQNDEKNRWY 99

[Close]

BLAST of Sed0023715 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 48/140 (34.29%), Postives = 67/140 (47.86%), Query Frame = 0


Query: 13  LLFSFILVARAQTPLPISIGSQDPDTEIKC------GSCPCNNPCVQQLPPPPPPPSPVP 72
           ++F+ +++A    P  I+ GS   D  ++           C+  C+Q  PPPP PP P P
Sbjct: 12  VIFTVMMIALLTCPTLIN-GSSSSDASLEARKLDEVDPIKCSPSCIQN-PPPPSPPPPSP 71

Query: 73  PPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYFSGATGK 132
           PPP C      PPPPP+   +  P  PPP  F+Y TG PGNLY  DE      F  A GK
Sbjct: 72  PPPACPPPPALPPPPPKKVSSYCP-PPPPANFLYITGPPGNLYPVDEQ-----FGAAAGK 131

Query: 133 QPAMAALVVALGCGALDLMV 147
              +  L   +  G +  ++
Sbjct: 132 SFMVVKLSGLIAFGIMAFLI 143

[Close]

BLAST of Sed0023715 vs. TAIR 10
Match: AT3G03350.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 79  PPPPRFTY-TTLPSSPPPPRFIYTTGVPGNLYQFDENHRWYYFSGATGKQPAMAALVVAL 138
           PPPPR TY +   SSPPPP+++Y TGVPG LY+ + + +W Y S           ++V +
Sbjct: 30  PPPPRKTYCSKSSSSPPPPKYMYVTGVPGELYRTEPDDQWGYNSSVNRNLVKCLLVIVIV 89

Query: 139 GCGALD 144
           G G ++
Sbjct: 90  GFGVIN 95

[Close]

BLAST of Sed0023715 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 48.5 bits (114), Expect = 5.4e-06
Identity = 43/110 (39.09%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 5   AAIFLTLSLLFSFILVARAQTPLPISIGSQDPDTEIKCGSCPCNNPCVQQLPPP-PPPPS 64
           AA  LT  +  +F ++  A          +DP   IKC       PC+Q +PPP PPPPS
Sbjct: 50  AATLLTTVVFLTFPMIINASDSSTNRKLEEDP---IKC------TPCLQNIPPPSPPPPS 109

Query: 65  PVPPPPYCNQALFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLYQFDE 114
           P PP   C      PP PP+ +Y      PPP  +IY TG PG LY  D+
Sbjct: 110 PPPPSQACPPPPL-PPSPPKKSY----CPPPPSTYIYMTGPPGELYPIDQ 145

[Close]

BLAST of Sed0023715 vs. TAIR 10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.3e-04
Identity = 35/92 (38.04%), Postives = 43/92 (46.74%), Query Frame = 0


Query: 40  IKCGSCPCNNPCVQQLPPPPPPPSPVPPPPYCNQALFHPPPPPRFTYTTLPSSPP-PPRF 99
           I C S  C+ P     PPPPPPP P PPPP        PPPPP + Y + P  PP PP +
Sbjct: 367 IDCASFGCSPPSPPPPPPPPPPPPPPPPPPPPPPP---PPPPPPYVYPSPPPPPPSPPPY 426

Query: 100 IYTTGVPGNLYQFDENHRWYYFSGATGKQPAM 131
           +Y    P  +Y    +  + Y       QP M
Sbjct: 427 VYPPPPPPYVYPPPPSPPYVYPPPPPSPQPYM 455

[Close]

BLAST of Sed0023715 vs. TAIR 10
Match: AT1G12040.1 (leucine-rich repeat/extensin 1 )

HSP 1 Score: 43.1 bits (100), Expect = 2.3e-04
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 57  PPPPPPSPVPPPPYCNQA-----LFHPPPPPRFTYTTLPSSPPPPRFIYTTGVPGNLY 110
           PPPPPPSP PPPPY   +     ++  PPPP + Y    SSPPPP ++Y++  P  +Y
Sbjct: 457 PPPPPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVY----SSPPPPPYVYSSPPPPYVY 510

The following BLAST results are available for this feature:

BLAST of Sed0023715 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581215.1	2.0e-47	70.67	hypothetical protein SDJN03_21217, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7017949.1	8.5e-46	68.67	hypothetical protein SDJN02_19815, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023528316.1	8.5e-46	69.33	leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022984145.1	5.5e-45	68.67	probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]	[more]
XP_011651408.1	1.8e-43	62.00	leucine-rich repeat extensin-like protein 3 [Cucumis sativus]	[more]

BLAST of Sed0023715 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0023715 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7W0	2.7e-45	68.67	probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0L7R0	8.6e-44	62.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1	[more]
A0A5A7V4T2	1.9e-43	64.00	Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A6J1GAW3	2.5e-35	65.79	leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KHA8	3.0e-20	59.66	leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Sed0023715 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23040.1	1.8e-09	34.29	hydroxyproline-rich glycoprotein family protein	[more]
AT3G03350.2	1.7e-07	40.91	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G70990.1	5.4e-06	39.09	proline-rich family protein	[more]
AT3G22800.1	1.3e-04	38.04	Leucine-rich repeat (LRR) family protein	[more]
AT1G12040.1	2.3e-04	46.55	leucine-rich repeat/extensin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35094:SF7	PROTEIN, PUTATIVE-RELATED	coord: 91..147
None	No IPR available	PANTHER	PTHR35094:SF7	PROTEIN, PUTATIVE-RELATED	coord: 6..88
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 6..88
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 91..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0023715.1	Sed0023715.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane